View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20955_low_6 (Length: 261)

Name: NF20955_low_6
Description: NF20955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20955_low_6
NF20955_low_6
[»] chr3 (48 HSPs)
chr3 (5-258)||(16743991-16744244)
chr3 (5-208)||(14842487-14842690)
chr3 (5-208)||(13839028-13839232)
chr3 (5-208)||(2049944-2050147)
chr3 (9-208)||(12030073-12030272)
chr3 (72-248)||(19231982-19232161)
chr3 (5-134)||(2449238-2449367)
chr3 (5-134)||(17912483-17912611)
chr3 (5-144)||(51158008-51158147)
chr3 (5-171)||(15858986-15859153)
chr3 (88-208)||(19260749-19260869)
chr3 (5-127)||(15936634-15936756)
chr3 (5-134)||(13975722-13975850)
chr3 (5-134)||(45860940-45861068)
chr3 (5-134)||(13954890-13955018)
chr3 (5-127)||(15938476-15938598)
chr3 (176-248)||(3992873-3992945)
chr3 (176-248)||(55513193-55513265)
chr3 (173-248)||(15857123-15857198)
chr3 (22-100)||(16821291-16821369)
chr3 (10-209)||(15614973-15615170)
chr3 (5-122)||(55316354-55316471)
chr3 (176-248)||(2844514-2844586)
chr3 (176-231)||(17955861-17955916)
chr3 (5-122)||(41270210-41270327)
chr3 (176-248)||(54037984-54038056)
chr3 (176-248)||(7854305-7854377)
chr3 (176-237)||(45581954-45582016)
chr3 (77-118)||(14080715-14080756)
chr3 (176-208)||(2449152-2449184)
chr3 (176-208)||(16261777-16261809)
chr3 (176-208)||(16933869-16933901)
chr3 (192-248)||(17191879-17191935)
chr3 (176-208)||(17912398-17912430)
chr3 (176-208)||(23492696-23492728)
chr3 (176-208)||(38168237-38168269)
chr3 (176-208)||(53771365-53771397)
chr3 (37-127)||(11986173-11986263)
chr3 (176-208)||(11986080-11986112)
chr3 (176-208)||(13954804-13954836)
chr3 (176-208)||(14285289-14285321)
chr3 (192-248)||(17205019-17205075)
chr3 (176-208)||(19947026-19947058)
chr3 (176-208)||(30153265-30153297)
chr3 (176-208)||(33342204-33342236)
chr3 (176-248)||(38810869-38810941)
chr3 (176-208)||(45861122-45861154)
chr3 (176-208)||(51961031-51961063)
[»] chr1 (21 HSPs)
chr1 (5-258)||(41394356-41394609)
chr1 (5-208)||(20913164-20913367)
chr1 (5-208)||(20931479-20931682)
chr1 (38-208)||(37844374-37844546)
chr1 (5-208)||(20893551-20893755)
chr1 (5-208)||(20445813-20446019)
chr1 (5-134)||(51452626-51452755)
chr1 (5-208)||(20531578-20531783)
chr1 (5-209)||(45051557-45051759)
chr1 (7-100)||(2116391-2116484)
chr1 (176-248)||(21860334-21860406)
chr1 (176-248)||(44034831-44034903)
chr1 (5-84)||(22227943-22228022)
chr1 (5-84)||(22232640-22232719)
chr1 (5-100)||(18601140-18601235)
chr1 (5-122)||(5072388-5072505)
chr1 (176-248)||(41218728-41218800)
chr1 (142-248)||(27675086-27675190)
chr1 (192-248)||(13376712-13376768)
chr1 (176-207)||(15861327-15861358)
chr1 (176-208)||(51452809-51452841)
[»] chr2 (32 HSPs)
chr2 (5-248)||(20627198-20627442)
chr2 (5-208)||(462872-463075)
chr2 (5-246)||(19794591-19794833)
chr2 (5-248)||(43642841-43643086)
chr2 (5-208)||(36982364-36982570)
chr2 (5-208)||(8891376-8891581)
chr2 (5-134)||(19689401-19689530)
chr2 (5-134)||(23820205-23820334)
chr2 (5-134)||(14906440-14906569)
chr2 (5-134)||(20015145-20015274)
chr2 (5-208)||(24341309-24341518)
chr2 (5-134)||(17396653-17396781)
chr2 (5-134)||(25265390-25265519)
chr2 (112-208)||(22863169-22863267)
chr2 (176-248)||(22284278-22284350)
chr2 (176-248)||(22275045-22275117)
chr2 (5-84)||(7507894-7507973)
chr2 (177-248)||(15633538-15633609)
chr2 (5-122)||(19886661-19886778)
chr2 (176-209)||(19689314-19689347)
chr2 (176-208)||(9652796-9652828)
chr2 (176-208)||(14906354-14906386)
chr2 (176-208)||(23820388-23820420)
chr2 (176-207)||(25213372-25213403)
chr2 (176-208)||(7507757-7507789)
chr2 (176-208)||(17396567-17396599)
chr2 (176-248)||(19666848-19666920)
chr2 (176-208)||(20015328-20015360)
chr2 (176-208)||(28031134-28031166)
chr2 (142-208)||(31146073-31146138)
chr2 (176-208)||(33128372-33128404)
chr2 (192-248)||(43646232-43646288)
[»] scaffold0266 (2 HSPs)
scaffold0266 (5-208)||(1258-1462)
scaffold0266 (5-208)||(3508-3711)
[»] scaffold0023 (3 HSPs)
scaffold0023 (5-208)||(48732-48935)
scaffold0023 (5-100)||(36228-36323)
scaffold0023 (176-208)||(61122-61154)
[»] chr4 (26 HSPs)
chr4 (5-208)||(122023-122226)
chr4 (5-246)||(54118130-54118373)
chr4 (5-208)||(13246564-13246769)
chr4 (5-134)||(26680334-26680463)
chr4 (5-134)||(10488696-10488825)
chr4 (5-208)||(15675009-15675218)
chr4 (5-134)||(16327926-16328055)
chr4 (5-208)||(10104170-10104379)
chr4 (5-134)||(13048221-13048350)
chr4 (72-208)||(33240901-33241043)
chr4 (6-107)||(31115764-31115865)
chr4 (11-100)||(10644360-10644449)
chr4 (176-248)||(25119067-25119139)
chr4 (5-122)||(47357789-47357906)
chr4 (102-208)||(31132545-31132657)
chr4 (9-118)||(40885570-40885680)
chr4 (176-248)||(5682388-5682460)
chr4 (176-208)||(14952085-14952117)
chr4 (176-208)||(15135907-15135939)
chr4 (176-208)||(15272211-15272243)
chr4 (176-208)||(16327840-16327872)
chr4 (176-208)||(16609013-16609045)
chr4 (176-208)||(26680517-26680549)
chr4 (176-208)||(8045272-8045304)
chr4 (176-208)||(16523146-16523178)
chr4 (176-248)||(41165809-41165881)
[»] chr7 (42 HSPs)
chr7 (6-248)||(3060101-3060343)
chr7 (5-208)||(16211900-16212103)
chr7 (5-208)||(13036938-13037143)
chr7 (5-208)||(36052798-36053003)
chr7 (5-208)||(11580661-11580868)
chr7 (5-134)||(11516361-11516490)
chr7 (5-134)||(15441564-15441693)
chr7 (5-134)||(30262129-30262258)
chr7 (5-134)||(7293150-7293279)
chr7 (5-134)||(47481031-47481160)
chr7 (5-127)||(18253842-18253964)
chr7 (5-134)||(25292338-25292467)
chr7 (9-133)||(13321152-13321278)
chr7 (5-99)||(16478985-16479079)
chr7 (5-100)||(13572811-13572906)
chr7 (176-248)||(126738-126810)
chr7 (176-248)||(32493906-32493978)
chr7 (10-100)||(13911046-13911136)
chr7 (5-122)||(10989544-10989661)
chr7 (5-100)||(2437592-2437687)
chr7 (6-206)||(295893-296094)
chr7 (176-241)||(1936884-1936949)
chr7 (176-248)||(111129-111201)
chr7 (177-248)||(7283916-7283987)
chr7 (142-248)||(13377819-13377923)
chr7 (92-134)||(14113989-14114031)
chr7 (92-134)||(14423639-14423681)
chr7 (176-208)||(2029244-2029276)
chr7 (176-208)||(7293333-7293365)
chr7 (176-208)||(11516544-11516576)
chr7 (176-208)||(14113903-14113935)
chr7 (176-208)||(15441478-15441510)
chr7 (139-208)||(15709428-15709501)
chr7 (176-208)||(30262043-30262075)
chr7 (176-208)||(42056188-42056220)
chr7 (176-208)||(371417-371449)
chr7 (176-208)||(3049905-3049937)
chr7 (176-208)||(13321334-13321366)
chr7 (192-248)||(13389693-13389749)
chr7 (176-204)||(15516765-15516793)
chr7 (176-208)||(25124450-25124482)
chr7 (176-208)||(47480944-47480976)
[»] chr8 (34 HSPs)
chr8 (5-208)||(16193643-16193845)
chr8 (5-248)||(16404860-16405104)
chr8 (5-208)||(24928716-24928920)
chr8 (5-208)||(43373392-43373597)
chr8 (5-134)||(5238221-5238350)
chr8 (5-134)||(22907214-22907343)
chr8 (5-134)||(24661248-24661377)
chr8 (5-134)||(43685680-43685809)
chr8 (5-122)||(6774258-6774375)
chr8 (5-134)||(17345703-17345832)
chr8 (5-100)||(21844594-21844689)
chr8 (7-122)||(24549118-24549233)
chr8 (5-100)||(21851987-21852082)
chr8 (176-248)||(274766-274838)
chr8 (176-248)||(641011-641083)
chr8 (176-248)||(826817-826889)
chr8 (176-248)||(24716722-24716794)
chr8 (5-122)||(30120857-30120974)
chr8 (5-122)||(16674392-16674509)
chr8 (176-248)||(39115598-39115670)
chr8 (176-208)||(5238404-5238436)
chr8 (176-208)||(22907128-22907160)
chr8 (176-208)||(24385652-24385684)
chr8 (176-208)||(24661162-24661194)
chr8 (176-208)||(43685863-43685895)
chr8 (5-59)||(222754-222808)
chr8 (5-59)||(691909-691963)
chr8 (5-59)||(736377-736431)
chr8 (5-59)||(860272-860326)
chr8 (77-118)||(25296364-25296405)
chr8 (77-118)||(25758384-25758425)
chr8 (176-208)||(2545265-2545297)
chr8 (176-208)||(3431176-3431208)
chr8 (176-208)||(22886654-22886686)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-206)||(51110-51311)
[»] scaffold0175 (1 HSPs)
scaffold0175 (5-208)||(882-1085)
[»] scaffold0106 (1 HSPs)
scaffold0106 (5-208)||(41863-42066)
[»] chr5 (30 HSPs)
chr5 (5-208)||(23507099-23507302)
chr5 (5-208)||(27182471-27182676)
chr5 (5-134)||(20623103-20623232)
chr5 (5-134)||(21233528-21233657)
chr5 (5-208)||(18530988-18531196)
chr5 (5-134)||(16536331-16536460)
chr5 (5-134)||(37052878-37053007)
chr5 (5-208)||(22053753-22053962)
chr5 (5-132)||(25900408-25900535)
chr5 (5-134)||(34939411-34939540)
chr5 (7-122)||(29188284-29188399)
chr5 (5-100)||(27009976-27010071)
chr5 (5-100)||(43443417-43443512)
chr5 (10-100)||(4200007-4200097)
chr5 (5-122)||(19500034-19500151)
chr5 (5-122)||(22366481-22366598)
chr5 (5-122)||(25426763-25426880)
chr5 (5-100)||(18778014-18778109)
chr5 (5-122)||(12509-12626)
chr5 (5-122)||(21073595-21073712)
chr5 (177-248)||(11584374-11584445)
chr5 (176-208)||(16105967-16105999)
chr5 (176-208)||(20623286-20623318)
chr5 (176-208)||(21233442-21233474)
chr5 (176-208)||(25900320-25900352)
chr5 (176-208)||(37053061-37053093)
chr5 (37-127)||(32950861-32950951)
chr5 (176-208)||(108728-108760)
chr5 (176-208)||(9730278-9730310)
chr5 (176-208)||(16536514-16536546)
[»] scaffold0413 (1 HSPs)
scaffold0413 (5-208)||(5990-6193)
[»] scaffold0001 (2 HSPs)
scaffold0001 (5-208)||(172039-172242)
scaffold0001 (5-208)||(177742-177945)
[»] scaffold0162 (2 HSPs)
scaffold0162 (5-208)||(26340-26544)
scaffold0162 (5-134)||(8180-8309)
[»] scaffold0077 (2 HSPs)
scaffold0077 (5-209)||(36836-37042)
scaffold0077 (177-248)||(15327-15398)
[»] chr6 (27 HSPs)
chr6 (5-208)||(23153581-23153786)
chr6 (5-207)||(14626045-14626247)
chr6 (5-134)||(1657748-1657877)
chr6 (5-134)||(35009439-35009568)
chr6 (5-134)||(15862605-15862734)
chr6 (5-209)||(1650020-1650222)
chr6 (139-208)||(23148266-23148335)
chr6 (176-248)||(19983152-19983224)
chr6 (176-248)||(35015017-35015089)
chr6 (5-94)||(25175698-25175787)
chr6 (5-122)||(27653983-27654100)
chr6 (5-122)||(16825752-16825871)
chr6 (176-248)||(18583640-18583712)
chr6 (51-134)||(27751605-27751688)
chr6 (37-134)||(29666040-29666137)
chr6 (176-208)||(18002395-18002427)
chr6 (176-208)||(23995247-23995279)
chr6 (176-208)||(26090059-26090091)
chr6 (176-207)||(4991396-4991427)
chr6 (178-208)||(15742120-15742150)
chr6 (176-208)||(1657661-1657693)
chr6 (176-208)||(15862789-15862821)
chr6 (176-208)||(18823283-18823315)
chr6 (176-208)||(18839138-18839170)
chr6 (192-248)||(21623506-21623562)
chr6 (176-208)||(27751742-27751774)
chr6 (176-208)||(32276659-32276691)
[»] scaffold0302 (1 HSPs)
scaffold0302 (5-208)||(12247-12450)
[»] scaffold0195 (2 HSPs)
scaffold0195 (5-205)||(19340-19543)
scaffold0195 (5-134)||(21424-21553)
[»] scaffold0008 (2 HSPs)
scaffold0008 (5-208)||(128095-128298)
scaffold0008 (10-100)||(31697-31787)
[»] scaffold0012 (2 HSPs)
scaffold0012 (5-208)||(247366-247571)
scaffold0012 (176-208)||(34075-34107)
[»] scaffold0218 (1 HSPs)
scaffold0218 (5-198)||(4996-5190)
[»] scaffold0028 (4 HSPs)
scaffold0028 (5-208)||(89378-89583)
scaffold0028 (83-208)||(107708-107835)
scaffold0028 (176-207)||(130880-130911)
scaffold0028 (77-118)||(79745-79786)
[»] scaffold0498 (1 HSPs)
scaffold0498 (5-208)||(9012-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-208)||(272159-272362)
[»] scaffold0011 (1 HSPs)
scaffold0011 (5-208)||(123087-123293)
[»] scaffold0141 (4 HSPs)
scaffold0141 (5-134)||(26929-27058)
scaffold0141 (5-127)||(22674-22796)
scaffold0141 (176-208)||(22857-22889)
scaffold0141 (176-208)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (5-134)||(1582-1711)
scaffold0124 (176-208)||(1496-1528)
[»] scaffold0078 (3 HSPs)
scaffold0078 (5-134)||(37066-37195)
scaffold0078 (176-248)||(41632-41704)
scaffold0078 (176-208)||(36980-37012)
[»] scaffold0025 (3 HSPs)
scaffold0025 (5-208)||(8983-9192)
scaffold0025 (5-160)||(148855-149012)
scaffold0025 (113-208)||(146843-146938)
[»] scaffold0772 (2 HSPs)
scaffold0772 (5-127)||(5663-5785)
scaffold0772 (176-208)||(5846-5878)
[»] scaffold0049 (2 HSPs)
scaffold0049 (5-127)||(48321-48443)
scaffold0049 (177-248)||(20493-20564)
[»] scaffold0132 (3 HSPs)
scaffold0132 (5-134)||(13640-13769)
scaffold0132 (176-248)||(42677-42746)
scaffold0132 (176-208)||(13824-13856)
[»] scaffold1542 (1 HSPs)
scaffold1542 (5-134)||(534-663)
[»] scaffold0125 (2 HSPs)
scaffold0125 (5-134)||(41782-41911)
scaffold0125 (168-208)||(41957-41997)
[»] scaffold0026 (3 HSPs)
scaffold0026 (5-127)||(107881-108003)
scaffold0026 (5-65)||(64585-64645)
scaffold0026 (77-119)||(89863-89905)
[»] scaffold0420 (1 HSPs)
scaffold0420 (7-100)||(13347-13440)
[»] scaffold0215 (2 HSPs)
scaffold0215 (7-100)||(9371-9464)
scaffold0215 (7-100)||(16269-16362)
[»] scaffold0075 (1 HSPs)
scaffold0075 (5-134)||(34460-34589)
[»] scaffold0116 (2 HSPs)
scaffold0116 (12-100)||(177-265)
scaffold0116 (176-241)||(30417-30482)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-84)||(5254-5333)
[»] scaffold0529 (1 HSPs)
scaffold0529 (5-123)||(3097-3215)
[»] scaffold0076 (1 HSPs)
scaffold0076 (5-99)||(43132-43226)
[»] scaffold0034 (1 HSPs)
scaffold0034 (176-248)||(80187-80259)
[»] scaffold0139 (2 HSPs)
scaffold0139 (5-100)||(14083-14178)
scaffold0139 (5-100)||(21138-21233)
[»] scaffold1711 (1 HSPs)
scaffold1711 (5-122)||(1304-1421)
[»] scaffold0016 (3 HSPs)
scaffold0016 (175-248)||(162038-162111)
scaffold0016 (175-248)||(166124-166197)
scaffold0016 (176-248)||(116411-116483)
[»] scaffold0686 (2 HSPs)
scaffold0686 (176-248)||(5737-5809)
scaffold0686 (176-248)||(5943-6015)
[»] scaffold0184 (1 HSPs)
scaffold0184 (176-248)||(31140-31212)
[»] scaffold0369 (1 HSPs)
scaffold0369 (5-84)||(3856-3936)
[»] scaffold0342 (1 HSPs)
scaffold0342 (175-248)||(312-385)
[»] scaffold0361 (1 HSPs)
scaffold0361 (41-134)||(3360-3453)
[»] scaffold1164 (1 HSPs)
scaffold1164 (177-248)||(1701-1772)
[»] scaffold0122 (2 HSPs)
scaffold0122 (177-248)||(19810-19881)
scaffold0122 (177-248)||(24114-24185)
[»] scaffold0876 (1 HSPs)
scaffold0876 (177-247)||(94-164)
[»] scaffold0084 (1 HSPs)
scaffold0084 (9-127)||(56106-56226)
[»] scaffold0467 (1 HSPs)
scaffold0467 (9-208)||(10256-10458)
[»] scaffold0310 (2 HSPs)
scaffold0310 (177-248)||(6264-6335)
scaffold0310 (177-214)||(4-41)
[»] scaffold0004 (1 HSPs)
scaffold0004 (176-209)||(193396-193429)
[»] scaffold0706 (1 HSPs)
scaffold0706 (176-208)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (176-208)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (176-208)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (176-208)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (176-208)||(57392-57424)
scaffold0058 (77-118)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (176-208)||(55904-55936)
scaffold0032 (176-208)||(108075-108107)
[»] scaffold0207 (1 HSPs)
scaffold0207 (165-208)||(18015-18058)
[»] scaffold0066 (2 HSPs)
scaffold0066 (37-208)||(45197-45370)
scaffold0066 (9-84)||(54553-54630)
[»] scaffold0507 (1 HSPs)
scaffold0507 (176-241)||(1371-1436)
[»] scaffold0456 (2 HSPs)
scaffold0456 (77-118)||(1546-1587)
scaffold0456 (77-118)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (77-118)||(8216-8257)
[»] scaffold0367 (1 HSPs)
scaffold0367 (176-208)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (176-208)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (176-208)||(4346-4378)
[»] scaffold0234 (1 HSPs)
scaffold0234 (176-208)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (176-208)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (176-208)||(34308-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (176-208)||(12418-12450)
[»] scaffold0013 (1 HSPs)
scaffold0013 (192-248)||(35816-35872)


Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 5 - 258
Target Start/End: Complemental strand, 16744244 - 16743991
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16744244 caattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaattcatggatacaaacatatcatcaaagt 16744145  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  16744144 tggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtaaagactaacctcgttac 16744045  T
Q  205 cttaattatctccaactactagctctaacttcactttggctcctttgtttctcc 258  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| || ||||||    
T  16744044 cttaattatctccaactattagctctagcttcactttagctcctatgattctcc 16743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 14842690 - 14842487
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||| ||||||||||| |||| |||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||    
T  14842690 caattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcacagt 14842591  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||    
T  14842590 tggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaagatgattatgataaagactaacccccttac 14842491  T
Q  205 ctta 208  Q
    ||||    
T  14842490 ctta 14842487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 13839028 - 13839232
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  13839028 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 13839127  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccctta 203  Q
    ||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  13839128 tggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgatgaagactaaccccctta 13839227  T
Q  204 cctta 208  Q
    |||||    
T  13839228 cctta 13839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 2049944 - 2050147
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| || || |||| ||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |||    
T  2049944 caattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcacagt 2050043  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  2050044 tggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttac 2050143  T
Q  205 ctta 208  Q
    ||||    
T  2050144 ctta 2050147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 12030272 - 12030073
Alignment:
Q  9 tttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggg 108  Q
    ||||| ||||| ||| |||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||     
T  12030272 tttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagttgga 12030173  T
Q  109 gcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||    
T  12030172 gcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaatttcacaaaatgatgatgattatgataatgattaacccccttacctta 12030073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 72 - 248
Target Start/End: Original strand, 19231982 - 19232161
Alignment:
Q  72 atcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaattt-acaa 168  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| ||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaa 19232081  T
Q  169 aatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  19232082 aatgatgatgattaagataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 19232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 2449367 - 2449238
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2449367 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 2449268  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  2449267 tggagcacgaatttagcaacaattatccat 2449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 17912611 - 17912483
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  17912611 caattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatc-aagt 17912513  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  17912512 tggagcacgaatttagcaacaattatccat 17912483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 51158147 - 51158008
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  51158147 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 51158048  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaatt 144  Q
    ||| ||||||||||||||||||| |||||||| |||||||    
T  51158047 tggagcacgaatttagcaacaattatccataagcaaaatt 51158008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 15859153 - 15858986
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | ||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  15859153 caattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 15859054  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaat 171  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||| ||| |||||||||||||    
T  15859053 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 88 - 208
Target Start/End: Complemental strand, 19260869 - 19260749
Alignment:
Q  88 aaacatatcatcaaagttggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgata 187  Q
    ||||||||||||| | || | ||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgata 19260770  T
Q  188 aagactaacccccttacctta 208  Q
    |||||||||||||||||||||    
T  19260769 aagactaacccccttacctta 19260749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 15936756 - 15936634
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||    
T  15936756 caattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagt 15936657  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||| ||||||    
T  15936656 tggagcacgaatttagtaacaat 15936634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 13975850 - 13975722
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||    
T  13975850 caatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagt 13975752  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  13975751 tggagcacgaatttagcaacaattatccat 13975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 45860940 - 45861068
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||    
T  45860940 caatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagt 45861038  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  45861039 tggagcacgaatttagcaacaattatccat 45861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 13955018 - 13954890
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||  |||||||||| |||||||||||||||||  ||||||||||||||| | || | |||||||||||||| ||||||||||||||||    
T  13955018 caatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagt 13954920  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  13954919 tggagcacgaatttagcaacaattatccat 13954890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 15938598 - 15938476
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||||| |||| |||||||||||  |||||||||||||| | |||    
T  15938598 caattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagt 15938499  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| ||||| |||||| ||||||    
T  15938498 tggagcacgtatttagtaacaat 15938476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 3992873 - 3992945
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  3992873 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 3992945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 55513193 - 55513265
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  55513193 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 55513265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 15857198 - 15857123
Alignment:
Q  173 atgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||    
T  15857198 atgatgattatgatgaagactaacccccttaccttaattatctccaagtattagctctagcttcactttagctcct 15857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 16821291 - 16821369
Alignment:
Q  22 catttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  16821291 catttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 15614973 - 15615170
Alignment:
Q  10 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgggg 109  Q
    |||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||| ||| || || |||  | |    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  110 cacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    ||| ||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  |||||||||||||||||||||||||||||||||    
T  15615073 cacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaacccccttacctta 15615169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 55316354 - 55316471
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||     
T  55316354 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagc 55316453  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  55316454 aagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 2844514 - 2844586
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  2844514 atgattatgataaaaactaacccccttaccttaattatctcaaactattagctctagcttcacttttgctcct 2844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 17955916 - 17955861
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctcta 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17955916 atgattatgataaagactaacccccttaccttaattatctccaactattagctcta 17955861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 41270210 - 41270327
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||  |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||     
T  41270210 caatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagc 41270309  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  41270310 aagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 54038056 - 54037984
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  54038056 atgattatgataaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 54037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 7854305 - 7854377
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  7854305 atgattatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 7854377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 45581954 - 45582016
Alignment:
Q  176 atgattatgataaagactaacccc-cttaccttaattatctccaactactagctctaacttca 237  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  45581954 atgattatgataaaaactaaccccccttaccttaattatctccaactattagctctagcttca 45582016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  14080715 ttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 2449184 - 2449152
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  2449184 atgattatgataaagactaacccccttacctta 2449152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 16261777 - 16261809
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  16261777 atgattatgataaagactaacccccttacctta 16261809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 16933901 - 16933869
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttacctta 16933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 17191879 - 17191935
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||| ||||||    
T  17191879 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 17191935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17912430 - 17912398
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  17912430 atgattatgataaagactaacccccttacctta 17912398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 23492696 - 23492728
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttacctta 23492728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 38168237 - 38168269
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttacctta 38168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 53771365 - 53771397
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  53771365 atgattatgataaagactaacccccttacctta 53771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 11986263 - 11986173
Alignment:
Q  37 aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaat 127  Q
    ||||||||||||| | | ||||||||||| |||| || || ||||||| || || ||| ||||| |||| | ||||||||||| |||||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat 11986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 11986112 - 11986080
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  11986112 atgattatgatgaagactaacccccttacctta 11986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 13954836 - 13954804
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  13954836 atgattatggtaaagactaacccccttacctta 13954804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 14285289 - 14285321
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  14285289 atgattatgatgaagactaacccccttacctta 14285321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 17205019 - 17205075
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  17205019 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 17205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 19947026 - 19947058
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  19947026 atgattatgatgaagactaacccccttacctta 19947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 30153265 - 30153297
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||| ||||||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttacctta 30153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 33342204 - 33342236
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||||||||||||||| |||||||||    
T  33342204 atgattatgataaagactaaccctcttacctta 33342236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 38810941 - 38810869
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| ||  ||||||||||||||||| ||||| |||| | ||||| | | ||||||||| ||||||    
T  38810941 atgattatgatgaattctaacccccttaccttagttatcaccaattcctagcccaagcttcactttagctcct 38810869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 45861122 - 45861154
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  45861122 atgattatggtaaagactaacccccttacctta 45861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 51961063 - 51961031
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  51961063 atgattatgatgaagactaacccccttacctta 51961031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 41394356 - 41394609
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| ||||||||| || ||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||    
T  41394356 caattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcatagt 41394455  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394456 tggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 41394555  T
Q  205 cttaattatctccaactactagctctaacttcactttggctcctttgtttctcc 258  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| || ||||||    
T  41394556 cttaattatctccaactattagctctagcttcactttagctcctatgattctcc 41394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 20913164 - 20913367
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  20913164 caattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 20913263  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  20913264 tggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatttgcaaaatgaggatgattacgataaagactaacccccttac 20913363  T
Q  205 ctta 208  Q
    ||||    
T  20913364 ctta 20913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 20931479 - 20931682
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  20931479 caattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 20931578  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| |||| ||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||    
T  20931579 tggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatttgcaaaatgaggatgattatgataaaggctaacccccttac 20931678  T
Q  205 ctta 208  Q
    ||||    
T  20931679 ctta 20931682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 37844546 - 37844374
Alignment:
Q  38 aacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccataat 137  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||| ||    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattat 37844447  T
Q  138 --caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
       ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37844446 gcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacccccttacctta 37844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 20893755 - 20893551
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  20893755 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 20893656  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||| ||||||||||||||| |||||| ||   ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  20893655 tggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgattatgatgaagactaaccccctt 20893557  T
Q  203 acctta 208  Q
    ||||||    
T  20893556 acctta 20893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 20445813 - 20446019
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||  |||| |||||| | | || || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |    
T  20445813 caattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaat 20445912  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccct 201  Q
    ||| ||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  20445913 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaactccct 20446012  T
Q  202 tacctta 208  Q
    |||||||    
T  20446013 tacctta 20446019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 51452626 - 51452755
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51452626 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 51452725  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||  ||||||||||||||||||| ||||||    
T  51452726 tgaagcacgaatttagcaacaattatccat 51452755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 20531578 - 20531783
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||  |||| |||||| | | || || |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| | |    
T  20531578 caattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatt 20531677  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||    
T  20531678 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaatttcctt 20531777  T
Q  203 acctta 208  Q
    ||||||    
T  20531778 acctta 20531783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 45051557 - 45051759
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||    
T  45051557 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagt 45051656  T
Q  105 tggggcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
      |  ||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||    
T  45051657 aagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatca-catgattatgataaagactaaccccctta 45051753  T
Q  204 ccttaa 209  Q
    ||||||    
T  45051754 ccttaa 45051759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 2116391 - 2116484
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  2116391 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 2116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 21860334 - 21860406
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  21860334 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 21860406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 44034903 - 44034831
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  44034903 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 44034831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 22227943 - 22228022
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| || |||||||||||| |||| |||||||||||||    
T  22227943 caattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22228022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 22232640 - 22232719
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| || |||||||||||| |||| |||||||||||||    
T  22232640 caattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 18601235 - 18601140
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  18601235 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 5072505 - 5072388
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||| ||||||| ||||| ||     
T  5072505 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagc 5072406  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  5072405 aagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 41218728 - 41218800
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  41218728 atgatcatgatgaaaactaacccccttaccttaattatcaccaactattagctcaagcttcacttttgctcct 41218800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 27675086 - 27675190
Alignment:
Q  142 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 241  Q
    |||||||||||| |||||||||||||  |  |  | ||||||||||||  |||||||||||||||||||||||||||| | ||||| | | |||||||||    
T  27675086 attcatacaacaattgaaaatttacactaaaa--acgattatgataaattctaacccccttaccttaattatctccaattcctagcccaagcttcacttt 27675183  T
Q  242 ggctcct 248  Q
     ||||||    
T  27675184 agctcct 27675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 13376768 - 13376712
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | ||||||||||| ||||||    
T  13376768 ctaacccccttaccttaattatcaccaattcctagcccaaacttcactttagctcct 13376712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  176 atgattatgataaagactaacccccttacctt 207  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 51452809 - 51452841
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||| |||||||||||||||||||||||||    
T  51452809 atgattaagataaagactaacccccttacctta 51452841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 20627442 - 20627198
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| || || ||||||||||||||||  ||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||| |||    
T  20627442 caattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcacagt 20627343  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa-tttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
    ||| ||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  20627342 tggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaattttacaaaatgatgatgattatgataaagactaaccccgtta 20627243  T
Q  204 ccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  20627242 ccttaattatctccaactattagctctagcttcacttttgctcct 20627198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 462872 - 463075
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |||    
T  462872 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagt 462971  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  462972 tggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 463071  T
Q  205 ctta 208  Q
    ||||    
T  463072 ctta 463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 19794833 - 19794591
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  19794833 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcacagt 19794734  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||| | ||||| |||||| ||   ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  19794733 tggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatgattatgatgaagactaaccccctt 19794635  T
Q  203 accttaattatctccaactactagctctaacttcactttggctc 246  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||    
T  19794634 accttaattatctccaactattagctctagcttcacttttgctc 19794591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 43643086 - 43642841
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  ||||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |    
T  43643086 caattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaat 43642987  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| |||| |||||||||||||| |||||  ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  43642986 tggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgattatgataaagactaacctcctt 43642887  T
Q  203 accttaattatctccaactactagctctaacttcactttggctcct 248  Q
     ||||||||||||||||||| |||||||| ||||||||| ||||||    
T  43642886 cccttaattatctccaactattagctctagcttcacttttgctcct 43642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 36982570 - 36982364
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||| ||||| |||| |||| ||||||||||| ||||||||||||||||| |||    
T  36982570 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcacagt 36982471  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaaccccct 201  Q
    ||| ||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36982470 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaaccccct 36982371  T
Q  202 tacctta 208  Q
    |||||||    
T  36982370 tacctta 36982364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 8891376 - 8891581
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| ||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||| |||    
T  8891376 caattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagt 8891475  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8891476 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccttt 8891575  T
Q  203 acctta 208  Q
    ||||||    
T  8891576 acctta 8891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 19689530 - 19689401
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19689530 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 19689431  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  19689430 tggagcacgaatttagcaacaattatccat 19689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 23820205 - 23820334
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23820205 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 23820304  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  23820305 tggagcacgaatttagcaacaattatccat 23820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 14906569 - 14906440
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14906569 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 14906470  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  14906469 tggagcacgaatttagcaacaattatccat 14906440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 20015145 - 20015274
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  20015145 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattattatcaattcatgcatgcaaacatatcatcaaagt 20015244  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  20015245 tggagcacgaatttagcaacaattatccat 20015274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 24341518 - 24341309
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || ||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  24341518 caattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 24341419  T
Q  105 tggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaaccc 198  Q
    ||  ||| ||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||    
T  24341418 tgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaaccc 24341319  T
Q  199 ccttacctta 208  Q
    ||||||||||    
T  24341318 ccttacctta 24341309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 17396781 - 17396653
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| | || | |||||||||||||| ||||||||||||||||    
T  17396781 caatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaaagt 17396683  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  17396682 tggagcacgaatttagcaacaattatccat 17396653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 25265519 - 25265390
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  25265519 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagt 25265420  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  25265419 tagagcacgaatttagcaacaattatccat 25265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 112 - 208
Target Start/End: Original strand, 22863169 - 22863267
Alignment:
Q  112 cgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||| |||||| ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 22863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 22284278 - 22284350
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22284278 atgattatgataaagactaacccccttaccttaattatctccaactattagctctaacttcacttttgctcct 22284350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 22275045 - 22275117
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  22275045 atgattatgataaaggctaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 22275117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7507973 - 7507894
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    ||||||||||||||| | |||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  7507973 caattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 7507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 15633538 - 15633609
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||| ||||||    
T  15633538 tgattatgataaagactaacctccttaccttaattatctccaactattaactctagcttcacttttgctcct 15633609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 19886778 - 19886661
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| ||| |||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||     
T  19886778 caatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagc 19886679  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  19886678 aagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 19689347 - 19689314
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaa 209  Q
    ||||||||||||||||||||||||||||||||||    
T  19689347 atgattatgataaagactaacccccttaccttaa 19689314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 9652828 - 9652796
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttacctta 9652796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 14906386 - 14906354
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  14906386 atgattatgataaagactaacccccttacctta 14906354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 23820388 - 23820420
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  23820388 atgattatgataaagactaacccccttacctta 23820420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  176 atgattatgataaagactaacccccttacctt 207  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 7507789 - 7507757
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttacctta 7507757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17396599 - 17396567
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  17396599 atgattatggtaaagactaacccccttacctta 17396567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 19666848 - 19666920
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| ||  ||||||||||||||||||||| | | || | ||||| | ||||||||||| ||||||    
T  19666848 atgattatgatgaattctaacccccttaccttaattagcacaaattcctagcccaaacttcactttagctcct 19666920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20015328 - 20015360
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||| |||||||||||||||||||||||||||    
T  20015328 atgatcatgataaagactaacccccttacctta 20015360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 28031166 - 28031134
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttacctta 28031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 31146138 - 31146073
Alignment:
Q  142 attcatacaaca-tttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||| ||  |||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttacctta 31146073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 33128372 - 33128404
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  33128372 atgattatgatgaagactaacccccttacctta 33128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 43646232 - 43646288
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  43646232 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 43646288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 1258 - 1462
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  1258 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaaagt 1357  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccctta 203  Q
    ||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1358 tggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattatgataaagactaaccccctta 1457  T
Q  204 cctta 208  Q
    |||||    
T  1458 cctta 1462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 3711 - 3508
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  3711 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 3612  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  3611 tggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatttacaaaatgaagatgattatgacaaagactaacccccttac 3512  T
Q  205 ctta 208  Q
    ||||    
T  3511 ctta 3508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 156; Significance: 6e-83; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 48732 - 48935
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||| | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  48732 caattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 48831  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48832 tggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 48931  T
Q  205 ctta 208  Q
    ||||    
T  48932 ctta 48935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 36228 - 36323
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||| ||||| | || ||||||||| |||||||||||||||  ||  |||||||||| |||||||||||| |||||    
T  36228 caatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacatacaaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 61154 - 61122
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttacctta 61122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 122023 - 122226
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  122023 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 122122  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  122123 tggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatccccttac 122222  T
Q  205 ctta 208  Q
    ||||    
T  122223 ctta 122226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 54118373 - 54118130
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||| || | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |    
T  54118373 caattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaat 54118274  T
Q  105 tggggcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||    
T  54118273 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgattatgatgaagactaaccccctt 54118174  T
Q  203 accttaattatctccaactactagctctaacttcactttggctc 246  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||    
T  54118173 accttaattatctccaactattagctctagcttcacttttgctc 54118130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 13246564 - 13246769
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||| |||    
T  13246564 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcacagt 13246663  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||  ||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246664 tgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 13246763  T
Q  203 acctta 208  Q
    ||||||    
T  13246764 acctta 13246769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 26680334 - 26680463
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26680334 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 26680433  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  26680434 tggagcacgaatttagcaacaattatccat 26680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 10488696 - 10488825
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10488696 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 10488795  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  10488796 tggagcacgaatttagcaacaattatccat 10488825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 15675218 - 15675009
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  15675218 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 15675119  T
Q  105 tggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaaccc 198  Q
    ||| ||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||    
T  15675118 tggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaaccc 15675019  T
Q  199 ccttacctta 208  Q
    ||||||||||    
T  15675018 ccttacctta 15675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 16328055 - 16327926
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16328055 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 16327956  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  16327955 tggagcacgaatttagcaacaattatccat 16327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 10104379 - 10104170
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  10104379 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 10104280  T
Q  105 tggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaaccc 198  Q
    ||| ||||| ||||||||||||| |||||  ||   ||||||||||| ||||||||||| ||  |||    ||||||||||||||||| |||||||||||    
T  10104279 tggagcacggatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagactaaccc 10104180  T
Q  199 ccttacctta 208  Q
    ||||||||||    
T  10104179 ccttacctta 10104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 13048350 - 13048221
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||| | || ||||| |||||||||||||||||||||  ||||    
T  13048350 caatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattgaagt 13048251  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||| ||||||||||||||| ||||||    
T  13048250 tggagcatgaatttagcaacaattatccat 13048221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 208
Target Start/End: Original strand, 33240901 - 33241043
Alignment:
Q  72 atcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa 169  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    
T  33240901 atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaa 33241000  T
Q  170 ----atgatgatgattatgataaagactaacccccttacctta 208  Q
        ||||||||||||||||| |||||||||||||||||||||    
T  33241001 aatgatgatgatgattatgatgaagactaacccccttacctta 33241043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 31115764 - 31115865
Alignment:
Q  6 aattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 105  Q
    |||||||| |||||  |||||||||||| |  |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  31115764 aattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T
Q  106 gg 107  Q
    ||    
T  31115864 gg 31115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 10644360 - 10644449
Alignment:
Q  11 tcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||||||||  ||||||||||||||| |||||||||||| || |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  10644360 tcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 25119139 - 25119067
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  25119139 atgattatgataaaaactaactcccttaccttaattatctccaactattagctctagcttcacttttgctcct 25119067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 47357789 - 47357906
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  |||||| |||||||||||||||| ||||| ||     
T  47357789 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcatacaaacataacatcacagc 47357888  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  47357889 aagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 31132545 - 31132657
Alignment:
Q  102 agttggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaa 195  Q
    |||||| ||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    |||||||| |||||||| ||||||||    
T  31132545 agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagactaa 31132644  T
Q  196 cccccttacctta 208  Q
    |||||||||||||    
T  31132645 cccccttacctta 31132657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 40885680 - 40885570
Alignment:
Q  9 tttcataacttttcatttttacata-tttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttgg 107  Q
    |||||||||||  ||||| |||||| ||| |||||||||||| |||||||| ||| || |||| | ||||||||||||||||||||| || || ||||||    
T  40885680 tttcataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttgg 40885581  T
Q  108 ggcacgaattt 118  Q
     | ||||||||    
T  40885580 agtacgaattt 40885570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 5682460 - 5682388
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||   ||||||||| ||||||    
T  5682460 atgattatgataaaaactaacccacttaccttaattatcaccaactattagctcatgcttcacttttgctcct 5682388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 14952085 - 14952117
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttacctta 14952117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 15135939 - 15135907
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  15135939 atgattatgataaagactaacccccttacctta 15135907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 15272243 - 15272211
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  15272243 atgattatgataaagactaacccccttacctta 15272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 16327872 - 16327840
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  16327872 atgattatgataaagactaacccccttacctta 16327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 16609045 - 16609013
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  16609045 atgattatgataaagactaacccccttacctta 16609013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 26680517 - 26680549
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttacctta 26680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 8045272 - 8045304
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttacctta 8045304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 16523146 - 16523178
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttacctta 16523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 41165881 - 41165809
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| ||  ||||||||||||| ||||||||| |||| | ||||| | | ||||||||| ||||||    
T  41165881 atgattatgatgaattctaacccccttacgttaattatcaccaattcctagcccaagcttcactttagctcct 41165809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 6e-80; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 3060101 - 3060343
Alignment:
Q  6 aattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 105  Q
    |||||||| || || |||||||||||||||| |||||||||||| ||||||| |  |||| |||| ||||||| ||||||||||| |||| |||| ||||    
T  3060101 aattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagtt 3060200  T
Q  106 ggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 205  Q
    || ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3060201 ggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatttacaaaatgatgatgattatgataaagacttacccccttacc 3060300  T
Q  206 ttaattatctccaactactagctctaacttcactttggctcct 248  Q
    || |||||||||||||| |||||||| ||||||||| ||||||    
T  3060301 ttcattatctccaactattagctctagcttcacttttgctcct 3060343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 16211900 - 16212103
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||| ||||| || ||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  16211900 caattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 16211999  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  16212000 tggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaacccccttac 16212099  T
Q  205 ctta 208  Q
    ||||    
T  16212100 ctta 16212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 13037143 - 13036938
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||| ||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  13037143 caattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 13037044  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  13037043 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatggtgaagactaaccccctt 13036944  T
Q  203 acctta 208  Q
    ||||||    
T  13036943 acctta 13036938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 36052798 - 36053003
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| | |||| |||||||||||||||||||| |||||||| |||    
T  36052798 caattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagt 36052897  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| | |  |||||||||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  36052898 tggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccctt 36052997  T
Q  203 acctta 208  Q
    ||||||    
T  36052998 acctta 36053003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 11580868 - 11580661
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||    
T  11580868 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacagt 11580769  T
Q  105 tggggcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaaccccc 200  Q
    ||| ||||||||||||||| ||| |||||| ||    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  11580768 tggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatgattatgataaagactaatcccc 11580669  T
Q  201 ttacctta 208  Q
    ||||||||    
T  11580668 ttacctta 11580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 11516361 - 11516490
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11516361 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 11516460  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  11516461 tggagcacgaatttagcaacaattatccat 11516490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 15441693 - 15441564
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15441693 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 15441594  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  15441593 tggagcacgaatttagcaacaattatccat 15441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 30262258 - 30262129
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30262258 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 30262159  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  30262158 tggagcacgaatttagcaacaattatccat 30262129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 7293150 - 7293279
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7293150 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattattaattcatgcatacaaacatatcatcaaagt 7293249  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  7293250 tggagcacgaatttagcaacaattatccat 7293279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 47481160 - 47481031
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| || |||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  47481160 caattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 47481061  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  47481060 tagagcacgaatttagcaacaattatccat 47481031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 18253964 - 18253842
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||    
T  18253964 caattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagt 18253865  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||| ||||||    
T  18253864 tggagcacgaatttagtaacaat 18253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 25292467 - 25292338
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||| ||| || |||||||||||||||||||||||||| ||||||||||||||| | || | |||||||| ||||||||||||||||||||||    
T  25292467 caatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaaagt 25292368  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| |||| |||||||||||||| ||||||    
T  25292367 tggagcacaaatttagcaacaattatccat 25292338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 13321152 - 13321278
Alignment:
Q  9 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 106  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||     
T  13321152 tttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtta 13321251  T
Q  107 gggcacgaatttagcaacaatcatcca 133  Q
    | ||||||||||||||||||| |||||    
T  13321252 gagcacgaatttagcaacaattatcca 13321278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 16479079 - 16478985
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 99  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  16479079 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 13572811 - 13572906
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| | || ||||||||||||||||||||||| |||||    
T  13572811 caatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 126738 - 126810
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  126738 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctaacttcatttttgctcct 126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 32493978 - 32493906
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  32493978 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 32493906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 13911136 - 13911046
Alignment:
Q  10 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||||||||| |||||||| ||||| | |||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 10989544 - 10989661
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||     
T  10989544 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagc 10989643  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  10989644 aagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 2437592 - 2437687
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  2437592 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 2437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 206
Target Start/End: Complemental strand, 296094 - 295893
Alignment:
Q  6 aattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt 105  Q
    |||||| ||||||| ||||||||||||| || |||||| ||||| |||||||||||||   |||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  106 ggggcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
     |  |||||||||||||||||| || ||| || ||||| |||||||||  |||||||||  | ||||||||||  |||||| | ||||| ||||||||||    
T  295994 agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaaccccctta 295896  T
Q  204 cct 206  Q
    |||    
T  295895 cct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 1936949 - 1936884
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 241  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || ||||| |||||||||    
T  1936949 atgattatgataaaaactaacctccttaccttaattatctccaactattaactctagcttcacttt 1936884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 111201 - 111129
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||  |||||| | ||||||||| ||||||    
T  111201 atgattatgatgaaaactaacccccttaccttaattatcaccaacttttagctcaagcttcacttttgctcct 111129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 7283987 - 7283916
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| |||| || || ||| | ||||||||| ||||||    
T  7283987 tgattatgatgaaaactaacccccttaccttaattatcaccaattattaactcaagcttcacttttgctcct 7283916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 248
Target Start/End: Original strand, 13377819 - 13377923
Alignment:
Q  142 attcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 241  Q
    |||||||||||| |||||||||||||  |  |  ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | | |||||||||    
T  13377819 attcatacaacaattgaaaatttacactaaaa--atgattatgatgaattctaacccccttaccttaattatcaccaattcctagcccaagcttcacttt 13377916  T
Q  242 ggctcct 248  Q
     ||||||    
T  13377917 agctcct 13377923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
Q  92 atatcatcaaagttggggcacgaatttagcaacaatcatccat 134  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccat 14113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
Q  92 atatcatcaaagttggggcacgaatttagcaacaatcatccat 134  Q
    |||||||||||||||| ||||||||||||||||||| ||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccat 14423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 2029244 - 2029276
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttacctta 2029276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 7293333 - 7293365
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  7293333 atgattatgataaagactaacccccttacctta 7293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 11516544 - 11516576
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  11516544 atgattatgataaagactaacccccttacctta 11516576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 14113935 - 14113903
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  14113935 atgattatgataaagactaacccccttacctta 14113903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 15441510 - 15441478
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  15441510 atgattatgataaagactaacccccttacctta 15441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 15709428 - 15709501
Alignment:
Q  139 aaaattcatacaacatttgaaaatttacaaaat----gatgatgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| ||||||||||| || ||||||    ||||||||||||||| |||||||| || |||||||||    
T  15709428 aaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttacctta 15709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 30262075 - 30262043
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  30262075 atgattatgataaagactaacccccttacctta 30262043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 42056220 - 42056188
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  42056220 atgattatgataaagactaacccccttacctta 42056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 371417 - 371449
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttacctta 371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 3049905 - 3049937
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||| ||||||||||||||||||    
T  3049905 atgattatgataaaaactaacccccttacctta 3049937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 13321334 - 13321366
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  13321334 atgattatgatgaagactaacccccttacctta 13321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 13389693 - 13389749
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  13389693 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 13389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  176 atgattatgataaagactaacccccttac 204  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 25124450 - 25124482
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttacctta 25124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 47480976 - 47480944
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  47480976 atgattatgatgaagactaacccccttacctta 47480944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 16193845 - 16193643
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  16193845 caattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagt 16193746  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  16193745 tggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatttaccaaatgatgatgattatgataaagactaa-ccccttac 16193647  T
Q  205 ctta 208  Q
    ||||    
T  16193646 ctta 16193643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 248
Target Start/End: Complemental strand, 16405104 - 16404860
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  ||||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  16405104 caattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 16405005  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||| ||| |||||| ||   |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  16405004 tggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgattatgatgaagactaaccccctt 16404906  T
Q  203 accttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||||    
T  16404905 accttaattatctccaactattagctctagcttcacttttgctcct 16404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 24928920 - 24928716
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||| |||    
T  24928920 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcacagt 24928821  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaattt-acaaaatgatgatgattatgataaagactaaccccctta 203  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||    
T  24928820 tggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatttcacaaaatgacgatgattatgataaagactaaccccatta 24928721  T
Q  204 cctta 208  Q
    |||||    
T  24928720 cctta 24928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 43373597 - 43373392
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| | |||| |||||||||||||||||||| |||||||| |||    
T  43373597 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcacagt 43373498  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||  ||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43373497 tggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccctt 43373398  T
Q  203 acctta 208  Q
    ||||||    
T  43373397 acctta 43373392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 5238221 - 5238350
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5238221 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 5238320  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  5238321 tggagcacgaatttagcaacaattatccat 5238350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 22907343 - 22907214
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22907343 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 22907244  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  22907243 tggagcacgaatttagcaacaattatccat 22907214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 24661377 - 24661248
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24661377 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 24661278  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  24661277 tggagcacgaatttagcaacaattatccat 24661248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 43685680 - 43685809
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43685680 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 43685779  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  43685780 tggagcacgaatttagcaacaattatccat 43685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 6774375 - 6774258
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  6774375 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 6774276  T
Q  105 tggggcacgaatttagca 122  Q
      | |||||||| |||||    
T  6774275 aagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 17345703 - 17345832
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||||||||  |||||||||||| || ||||||| |||| ||||||||||||||| |||| ||||||||||||||| ||||||| ||||| |||    
T  17345703 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcacagt 17345802  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | |||||||||| |||||||| ||||||    
T  17345803 tagagcacgaatttcgcaacaattatccat 17345832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 21844689 - 21844594
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21844689 caatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 24549118 - 24549233
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 106  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||      
T  24549118 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa 24549217  T
Q  107 gggcacgaatttagca 122  Q
    | |||||||| |||||    
T  24549218 gagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 21852082 - 21851987
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  21852082 caatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 274766 - 274838
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  274766 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 274838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 641083 - 641011
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  641083 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 641011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 826889 - 826817
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  826889 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 24716794 - 24716722
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||    
T  24716794 atgattatgataaagactaacccccttaccttaattatcaccaactattagctctagcttcacttttgctcct 24716722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 30120857 - 30120974
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  || |||||||||||||||||||| ||||| ||     
T  30120857 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagc 30120956  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  30120957 aagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 16674509 - 16674392
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  || |||||||||||| ||||||| ||||| ||     
T  16674509 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacaga 16674410  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  16674409 aagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 39115598 - 39115670
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||| ||||||||||||||||  ||||||| |||||| | ||||||||| ||||||    
T  39115598 atgattatgatgaaaactaacacccttaccttaattattaccaactattagctcaagcttcacttttgctcct 39115670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 5238404 - 5238436
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  5238404 atgattatgataaagactaacccccttacctta 5238436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 22907160 - 22907128
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  22907160 atgattatgataaagactaacccccttacctta 22907128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 24385684 - 24385652
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  24385684 atgattatgataaagactaacccccttacctta 24385652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 24661194 - 24661162
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  24661194 atgattatgataaagactaacccccttacctta 24661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 43685863 - 43685895
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  43685863 atgattatgataaagactaacccccttacctta 43685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 222808 - 222754
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 59  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  222808 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 691963 - 691909
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 59  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  691963 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 736431 - 736377
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 59  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  736431 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 860326 - 860272
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaat 59  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||    
T  860326 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 25296364 - 25296405
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  25296364 ttcatgcattcaaacatatcatcatagttagggcacgaattt 25296405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 25758384 - 25758425
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  25758384 ttcatgcattcaaacatatcatcatagttagggcacgaattt 25758425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 2545265 - 2545297
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttacctta 2545297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 3431208 - 3431176
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  3431208 atgattatgatgaagactaacccccttacctta 3431176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 22886654 - 22886686
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  22886654 atgattatgattaagactaacccccttacctta 22886686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 51311 - 51110
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||| ||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |||    
T  51311 caattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcacagt 51212  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  51211 tggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaatctccttac 51112  T
Q  205 ct 206  Q
    ||    
T  51111 ct 51110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 1085 - 882
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| | |||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  1085 caattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 986  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||  ||| ||| ||||||||||||||||||||||||||||||    
T  985 tggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgtaaagtgaagatgattatgataaagactaacccccttac 886  T
Q  205 ctta 208  Q
    ||||    
T  885 ctta 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 41863 - 42066
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| || || |||||||||||||||| | |||||||||| |||||||||   ||| |||| ||||||||||||||||||||||||||||| |||    
T  41863 caattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcacagt 41962  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41963 tggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagaccaacccccttac 42062  T
Q  205 ctta 208  Q
    ||||    
T  42063 ctta 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 23507099 - 23507302
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |      
T  23507099 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaaa 23507198  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||    
T  23507199 tggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaatcttacaaaatggagatgattatgataaagactaacccccttac 23507298  T
Q  205 ctta 208  Q
    ||||    
T  23507299 ctta 23507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 27182676 - 27182471
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| | ||||||||||||| |||| |||| |||||||||||||||||||||||| |||    
T  27182676 caattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcacagt 27182577  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||| ||||||||||||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27182576 tggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccccctt 27182477  T
Q  203 acctta 208  Q
    ||||||    
T  27182476 acctta 27182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 20623103 - 20623232
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20623103 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 20623202  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  20623203 tggagcacgaatttagcaacaattatccat 20623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 21233657 - 21233528
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  21233657 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 21233558  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  21233557 tggagcacgaatttagcaacaattatccat 21233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 18531196 - 18530988
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  18531196 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 18531097  T
Q  105 tggggcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaatttacaaaatgatgat---gattatgataaagactaacccc 199  Q
    ||| ||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| || ||||||||||||   ||||||||| ||||||||||||    
T  18531096 tggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaaattgcaaaatgatgatgacgattatgatgaagactaacccc 18530997  T
Q  200 cttacctta 208  Q
    |||||||||    
T  18530996 cttacctta 18530988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 16536331 - 16536460
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  16536331 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattataaattcatgcatacaaacatatcatcaaagt 16536430  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  16536431 tggagcacgaatttagcaacaattatccat 16536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 37052878 - 37053007
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37052878 caattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 37052977  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  37052978 tggagcacgaatttagcaacaattatccat 37053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 22053962 - 22053753
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| |||||||||||||||  ||| |||||||||| |||||||||||||||||| |||    
T  22053962 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcacagt 22053863  T
Q  105 tggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaaccc 198  Q
    ||| ||||||||||||||||||| |||||  ||   ||||||||||| ||||||||||| || ||||    ||||||||||||||||| |||||||||||    
T  22053862 tggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaaatttcaaaaatgatgatgatgattatgatgaagactaaccc 22053763  T
Q  199 ccttacctta 208  Q
    ||||||||||    
T  22053762 ccttacctta 22053753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 25900535 - 25900408
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  25900535 caattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaaagt 25900436  T
Q  105 tggggcacgaatttagcaacaatcatcc 132  Q
    ||| ||||||||||||||||||| ||||    
T  25900435 tggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 34939411 - 34939540
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||||||||  |||||||||||| || ||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  34939411 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 34939510  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||| | ||||||    
T  34939511 tagagcacgaatttagcaacagttatccat 34939540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 29188399 - 29188284
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 106  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||      
T  29188399 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaa 29188300  T
Q  107 gggcacgaatttagca 122  Q
    | |||||||| |||||    
T  29188299 gagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 27009976 - 27010071
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| | || ||||||||||||||||||||||| |||||    
T  27009976 caatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 43443512 - 43443417
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  43443512 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 4200097 - 4200007
Alignment:
Q  10 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| |||||    
T  4200097 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 19500034 - 19500151
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||     
T  19500034 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagc 19500133  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  19500134 aagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 22366598 - 22366481
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||     
T  22366598 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagc 22366499  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  22366498 aagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 25426763 - 25426880
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||     
T  25426763 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagc 25426862  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  25426863 aagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 18778109 - 18778014
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| |||||    
T  18778109 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatca 18778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 12509 - 12626
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| ||| |||| ||||| | |||||||||||| ||||||||| |||||  ||  ||||||||||||||||||||||| ||||| ||     
T  12509 caatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcacagc 12608  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  12609 aagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 21073712 - 21073595
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  ||| ||||||||||||||||||| ||||| ||     
T  21073712 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcacagc 21073613  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  21073612 aagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 11584374 - 11584445
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| ||  ||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  11584374 tgattatgatgaattctaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 11584445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 16105967 - 16105999
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttacctta 16105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20623286 - 20623318
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  20623286 atgattatgataaagactaacccccttacctta 20623318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 21233474 - 21233442
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  21233474 atgattatgataaagactaacccccttacctta 21233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 25900352 - 25900320
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  25900352 atgattatgataaagactaacccccttacctta 25900320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 37053061 - 37053093
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  37053061 atgattatgataaagactaacccccttacctta 37053093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 32950861 - 32950951
Alignment:
Q  37 aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaat 127  Q
    ||||||||||||| | | ||||||||||| |||| ||||| |||| || || || ||| ||||| |||| | ||||||||||| |||||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat 32950951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 108760 - 108728
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  108760 atgattatgatgaagactaacccccttacctta 108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 9730310 - 9730278
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttacctta 9730278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 16536514 - 16536546
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||| ||||    
T  16536514 atgattatgataaagactaacccccttatctta 16536546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 6193 - 5990
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||| | ||||| | |||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  6193 caatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 6094  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||| |||  |||||||||||||||||||||||||||||    
T  6093 tggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatttgcaaagtgaaaatgattatgataaagactaacccccttac 5994  T
Q  205 ctta 208  Q
    ||||    
T  5993 ctta 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 172039 - 172242
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||    
T  172039 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagt 172138  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172139 tggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 172238  T
Q  205 ctta 208  Q
    ||||    
T  172239 ctta 172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 177742 - 177945
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| |||| |||||||||| |||| |||||||||| |||||||||||||||||| |||    
T  177742 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccatacaaacatatcatcacagt 177841  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| ||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177842 tggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 177941  T
Q  205 ctta 208  Q
    ||||    
T  177942 ctta 177945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 26544 - 26340
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||| ||| ||||| |||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  26544 caattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaagt 26445  T
Q  105 tggggcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
    ||| ||||||||||||||||||| || ||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26444 tggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatttacaaaatgatcatgattatgataaagactaaccccctta 26345  T
Q  204 cctta 208  Q
    |||||    
T  26344 cctta 26340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 8309 - 8180
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || ||| |||||||| ||||||||||||||| |||| | ||||||||||||||||||||| ||||| |||    
T  8309 caattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcacagt 8210  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  8209 tagagcacgaatttagcaacaattatccat 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 37042 - 36836
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||| | |||| |||| ||||||||||||||||||||||||||||| |||    
T  37042 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcatacaaacatatcatcacagt 36943  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||| ||||||| |||||| ||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  36942 tggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgattatgataaagactaaccccctt 36843  T
Q  203 accttaa 209  Q
    |||||||    
T  36842 accttaa 36836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 15398 - 15327
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||| |||| | | ||||||||| ||||||    
T  15398 tgattatgatgaatgctaacccccttaccttaattatctccaactattagcccaagcttcacttttgctcct 15327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 5e-68; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 23153581 - 23153786
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  23153581 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 23153680  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| |||||||||||| |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23153681 tggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaaccccctt 23153780  T
Q  203 acctta 208  Q
    ||||||    
T  23153781 acctta 23153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 14626247 - 14626045
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||     
T  14626247 caattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagc 14626148  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
      | ||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||  ||| ||| ||||||| ||||||  ||||||||||||||    
T  14626147 aagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatttgtaaagtgaagatgattgtgataataactaacccccttac 14626048  T
Q  205 ctt 207  Q
    |||    
T  14626047 ctt 14626045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 1657877 - 1657748
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||||||||  |||||||||||| || ||||||| |||| ||||||||||||||| |||| |||||||||||||| |||||||| ||||| |||    
T  1657877 caattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcacagt 1657778  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  1657777 tagagcacgaatttagcaacaattatccat 1657748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 35009568 - 35009439
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||    
T  35009568 caattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcacagt 35009469  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  35009468 tagagcacgaatttagcaacaattatccat 35009439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 15862605 - 15862734
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||||||||||||||  ||||| |||||| || ||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  15862605 caattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 15862704  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | |||||||||||| |||||| ||||||    
T  15862705 tagagcacgaatttagtaacaattatccat 15862734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 1650222 - 1650020
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||| || ||||| |||    
T  1650222 caattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagt 1650123  T
Q  105 tggggcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
      | |||||||| |||||  |||  | ||| || | |  ||||||||||||  |||||  | |||||| |  ||||||||||||||||||||||||||||    
T  1650122 aagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaa--tgcaaaatta-catgattatgataaagactaaccccctta 1650026  T
Q  204 ccttaa 209  Q
    ||||||    
T  1650025 ccttaa 1650020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 23148266 - 23148335
Alignment:
Q  139 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23148266 aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttacctta 23148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 19983224 - 19983152
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  19983224 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 35015089 - 35015017
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  35015089 atgattatgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 35015017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25175698 - 25175787
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacata 94  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  |||||||||||||||||||||||    
T  25175698 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 27654100 - 27653983
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |||||  ||  |||||||||||||||||| |||| ||||| ||     
T  27654100 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaagcataacatcacagc 27654001  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  27654000 aagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 16825871 - 16825752
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatcaaa 102  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| ||||||||| |  ||||  ||  ||||||||||||||||||||||| ||||| |    
T  16825871 caatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatcaca 16825772  T
Q  103 gttggggcacgaatttagca 122  Q
    |   | ||||||||||||||    
T  16825771 gcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 18583640 - 18583712
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  18583640 atgattatgatgaaaactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 18583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
Q  51 accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccat 134  Q
    ||||||||||||||| || | ||||||||||||||||||||||| ||||| | || | ||||||||||||| ||| | ||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat 27751688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 29666040 - 29666137
Alignment:
Q  37 aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccat 134  Q
    ||||||||||||| ||| ||||||||||| |||| |||||||||| ||||  || ||| ||||| || | | ||||||||||| ||||||| ||||||    
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 18002427 - 18002395
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  18002427 atgattatgataaagactaacccccttacctta 18002395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 23995247 - 23995279
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  23995247 atgattatgataaagactaacccccttacctta 23995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 26090059 - 26090091
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  26090059 atgattatgataaagactaacccccttacctta 26090091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  176 atgattatgataaagactaacccccttacctt 207  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 15742150 - 15742120
Alignment:
Q  178 gattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||    
T  15742150 gattatgataaagactaacccccttacctta 15742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 1657693 - 1657661
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  1657693 atgattatgatgaagactaacccccttacctta 1657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 15862789 - 15862821
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  15862789 atgattatgatgaagactaacccccttacctta 15862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 18823315 - 18823283
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  18823315 atgattatgatgaagactaacccccttacctta 18823283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 18839170 - 18839138
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  18839170 atgattatgatgaagactaacccccttacctta 18839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 21623506 - 21623562
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  21623506 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 21623562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 27751742 - 27751774
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  27751742 atgattatgatgaagactaacccccttacctta 27751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 32276691 - 32276659
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  32276691 atgattatgatgaagactaacccccttacctta 32276659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 12247 - 12450
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  12247 caattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 12346  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctta 203  Q
    | | ||||||||||||||||||| |||||||||||||| |||||||| |||||| ||| ||||||||| | |||||||||||||||||||||||||||||    
T  12347 tagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttg-aaagttacaaaattaagatgattatgataaagactaaccccctta 12445  T
Q  204 cctta 208  Q
    |||||    
T  12446 cctta 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 19340 - 19543
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  19340 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 19439  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaaccccct 201  Q
    ||| ||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    
T  19440 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatgattatgatgaagactaaccccct 19539  T
Q  202 tacc 205  Q
    ||||    
T  19540 tacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 21424 - 21553
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  21424 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 21523  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  21524 tggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 128298 - 128095
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  ||  |||||| |||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  128298 caattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 128199  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||  ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  128198 tgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttac 128099  T
Q  205 ctta 208  Q
    ||||    
T  128098 ctta 128095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  10 ttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||||||||| |||||||| ||||| | || ||||||||| |||||||||||||||  ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 247571 - 247366
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||| ||||| |||  |||||||||| |||| ||||||||||||||||||||||||||| | |||    
T  247571 caattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattacagt 247472  T
Q  105 tggggcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247471 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 247372  T
Q  203 acctta 208  Q
    ||||||    
T  247371 acctta 247366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 34107 - 34075
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttacctta 34075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 5190 - 4996
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||| ||| |||||||||| |||| |||| ||||||||| ||||||||||||||| ||| |||    
T  5190 caattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcacagt 5091  T
Q  105 tggggcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccc 198  Q
    ||| | ||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5090 tggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatttacaaaatgataatgattatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 119; Significance: 7e-61; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 89583 - 89378
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| | |||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||| |||    
T  89583 caattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcacagt 89484  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaaccccctt 202  Q
    ||| ||||||||||||||||||| |||||| ||   |||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  89483 tggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaaccccctt 89384  T
Q  203 acctta 208  Q
    ||||||    
T  89383 acctta 89378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 107835 - 107708
Alignment:
Q  83 catacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 180  Q
    |||||||| ||||||||| |||||| ||||||||||||||| ||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 107736  T
Q  181 tatgataaagactaacccccttacctta 208  Q
     ||||| |||||||||||||||||||||    
T  107735 catgatgaagactaacccccttacctta 107708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 130880 - 130911
Alignment:
Q  176 atgattatgataaagactaacccccttacctt 207  Q
    ||||||||||||||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctt 130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 79745 - 79786
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  79745 ttcatgcatacaaacatatcatcatagttagtgcacgaattt 79786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 9012 - 9215
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| |||||||||| |||| |||| ||| ||||||||||||||||||| ||||| |      
T  9012 caattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcacaaa 9111  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| |||||||||||||||||||  ||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  9112 tggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatttgcaaaatgaagatgattatgataaagactaacccccttac 9211  T
Q  205 ctta 208  Q
    ||||    
T  9212 ctta 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 272159 - 272362
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| ||||||||||||  ||| |||||||||| |||| |||||||||| |||||||||||||||| | |||    
T  272159 caattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcatacaaacatatcattacagt 272258  T
Q  105 tggggcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 204  Q
    ||| | ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  272259 tggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttac 272358  T
Q  205 ctta 208  Q
    ||||    
T  272359 ctta 272362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 123293 - 123087
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |    
T  123293 caattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaat 123194  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatttac-aaaatgatgatgattatgataaagactaaccccct 201  Q
    ||| ||||||||||||||||||| |||||| ||   ||||||||||||||||||| |||||||| ||||| |||||||||||| | ||||||||||||||    
T  123193 tggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatgattatggtgaagactaaccccct 123094  T
Q  202 tacctta 208  Q
    |||||||    
T  123093 tacctta 123087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 26929 - 27058
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26929 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 27028  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  27029 tggagcacgaatttagcaacaattatccat 27058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 22674 - 22796
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22674 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 22773  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||||||||||    
T  22774 tggagcacgaatttagcaacaat 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 22857 - 22889
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  22857 atgattatgataaagactaacccccttacctta 22889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 27112 - 27144
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  27112 atgattatgataaagactaacccccttacctta 27144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 1711 - 1582
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1711 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 1612  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  1611 tggagcacgaatttagcaacaattatccat 1582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 1528 - 1496
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  1528 atgattatgataaagactaacccccttacctta 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 37195 - 37066
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37195 caattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagt 37096  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  37095 tggagcacgaatttagcaacaattatccat 37066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 41632 - 41704
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  41632 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 41704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 37012 - 36980
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  37012 atgattatgataaagactaacccccttacctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 94; Significance: 6e-46; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 8983 - 9192
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||     
T  8983 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaga 9082  T
Q  105 tggggcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaatttacaaa----atgatgatgattatgataaagactaaccc 198  Q
    ||| ||||||||||||||||||| |||||  ||   ||||| ||||| ||||||||||| || ||||    ||||||||||||||||| ||||||||| |    
T  9083 tggagcacgaatttagcaacaattatccaattatgaaaaatacataccacatttgaaaaattgcaaaaatgatgatgatgattatgatgaagactaacac 9182  T
Q  199 ccttacctta 208  Q
     |||||||||    
T  9183 acttacctta 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 160
Target Start/End: Original strand, 148855 - 149012
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |||    
T  148855 caattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcacagt 148954  T
Q  105 tggggcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa 160  Q
    ||| |||| |||||| ||||||| ||| || ||   ||||||||||||||||||||||    
T  148955 tggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 146843 - 146938
Alignment:
Q  113 gaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146843 gaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacctta 146938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 5663 - 5785
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||||||    
T  5663 caatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaaagt 5762  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||||||||||    
T  5763 tggagcacgaatttagcaacaat 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 5846 - 5878
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||| |||||||||||||||||||||||    
T  5846 atgattatggtaaagactaacccccttacctta 5878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 48321 - 48443
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||    
T  48321 caattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagt 48420  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||||||||||    
T  48421 tggagcacgaatttagcaacaat 48443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 20493 - 20564
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||| ||| ||||||    
T  20493 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 20564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 82; Significance: 8e-39; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 13640 - 13769
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  13640 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaaagt 13739  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||||||| ||||||    
T  13740 tagagcacgaatttagcaacaattatccat 13769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 42677 - 42746
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||||| ||||||||||||||||   ||||||||||||| |||||||| ||||||||| ||||||    
T  42677 atgattatgataaaaactaacccccttacct---ttatctccaactattagctctagcttcacttttgctcct 42746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 13824 - 13856
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  13824 atgattatgatgaagactaacccccttacctta 13856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 663 - 534
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| ||||  |||||| | | ||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||    
T  663 caattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagt 564  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    ||| ||||||||||||||||||| ||||||    
T  563 tggagcacgaatttagcaacaattatccat 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 134
Target Start/End: Original strand, 41782 - 41911
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  41782 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 41881  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||| ||||||| ||||||    
T  41882 tagagcacgaatttaacaacaattatccat 41911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 41957 - 41997
Alignment:
Q  168 aaatgatgatgattatgataaagactaacccccttacctta 208  Q
    ||||||  ||||||||||| |||||||||||||||||||||    
T  41957 aaatgaacatgattatgatgaagactaacccccttacctta 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 107881 - 108003
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||| | ||||| |||||||| || |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||    
T  107881 caatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagt 107980  T
Q  105 tggggcacgaatttagcaacaat 127  Q
    ||| |||||||||||| ||||||    
T  107981 tggagcacgaatttagtaacaat 108003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 64645 - 64585
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcataca 65  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  64645 caatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcataca 64585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattta 119  Q
    |||||||||||||||||||||||| |||||| |||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 13440 - 13347
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  13440 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 9464 - 9371
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  9464 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 100
Target Start/End: Complemental strand, 16362 - 16269
Alignment:
Q  7 attttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  16362 attttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 34589 - 34460
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||   ||||||||| | || |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||    
T  34589 caattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagt 34490  T
Q  105 tggggcacgaatttagcaacaatcatccat 134  Q
    | | ||||||||||||||| ||| ||||||    
T  34489 tagagcacgaatttagcaataattatccat 34460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 177 - 265
Alignment:
Q  12 cataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||    
T  177 cataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 30417 - 30482
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 241  Q
    ||||||||||| || | |||||||||||||||||||||| |||| || || ||| | |||||||||    
T  30417 atgattatgatgaaaaataacccccttaccttaattatcaccaattattaactcaagcttcacttt 30482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 5333 - 5254
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  5333 caattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 3097 - 3215
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    ||||||||| |||||  |||||||||||| || |||||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||     
T  3097 caattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagc 3196  T
Q  105 tggggcacgaatttagcaa 123  Q
      | |||||||||||||||    
T  3197 aagagcacgaatttagcaa 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatc 99  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  43132 caatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 80187 - 80259
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||    
T  80187 atgattatgataaagactaacccccttaccttaattatctccaactattagctcaagcttcacttttgctcct 80259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 14178 - 14083
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||| | |||| ||||||||||||||||| ||||| |||||    
T  14178 caatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 21233 - 21138
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca 100  Q
    |||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||| | |||| ||||||| ||| ||||||||||| |||||    
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 1421 - 1304
Alignment:
Q  5 caattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagt 104  Q
    |||| |||||||||| |||||||| ||||| | |||||||||||| |||||||||||||||  ||  ||||||||||||||||||||||| ||||| ||     
T  1421 caatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagc 1322  T
Q  105 tggggcacgaatttagca 122  Q
      | ||||||||||||||    
T  1321 aagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 162111 - 162038
Alignment:
Q  175 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  162111 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 162038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 166197 - 166124
Alignment:
Q  175 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  166197 gatgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 166124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 116483 - 116411
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| ||  ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  116483 atgattatgatgaaatctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 116411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 5809 - 5737
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  5809 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 6015 - 5943
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  6015 atgattatgatgaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 31212 - 31140
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  31212 atgattgtgataaaaactaacccccttaccttaattatctccaactattagctctagcttcacttttgctcct 31140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 3856 - 3936
Alignment:
Q  5 caattttcataacttttcatttt-tacatatttaaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    |||||| |||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    
T  3856 caatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 385 - 312
Alignment:
Q  175 gatgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||| | ||||||||| ||||||    
T  385 gatgattatgataaagaataaccccgttaccttaattatcaccaactattagctcaagcttcacttttgctcct 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 3360 - 3453
Alignment:
Q  41 atgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccat 134  Q
    ||||||||| |||||||||||||||  ||| || ||||||||||||||||| || ||||| || | | |||||||||||||| |||| ||||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 1701 - 1772
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  1701 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 19881 - 19810
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| ||||||    
T  19881 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcct 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 24185 - 24114
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||| ||| ||||||    
T  24185 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcatttttgctcct 24114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 94 - 164
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcc 247  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| || ||| | ||||||||| |||||    
T  94 tgattatgatgaacactaacccccttaccttaattatcaccaactattaactcaagcttcacttttgctcc 164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
Q  9 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 106  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| ||||     
T  56226 tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta 56127  T
Q  107 gggcacgaatttagcaacaat 127  Q
    | ||||||||||| |||||||    
T  56126 gagcacgaatttaacaacaat 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 10458 - 10256
Alignment:
Q  9 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg 106  Q
    |||||||||||  ||||| |||||| ||  ||||||||||||| ||| |||| |||||  | || ||||||||||||| |  || ||||||||| ||       
T  10458 tttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaa 10359  T
Q  107 gggcacgaatttagcaacaatcatccat-aatcaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 205  Q
    | ||||||||||||||||||| || ||| || | |  ||||||||||||  ||||||  | ||| |||  ||||||||||  ||||| ||||||||||||    
T  10358 gagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttacc 10259  T
Q  206 tta 208  Q
    |||    
T  10258 tta 10256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 6335 - 6264
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || ||| | ||||||||| ||||||    
T  6335 tgattatgatgaacactaacccccttaccttaattatcacccactattaactcaagcttcacttttgctcct 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 41 - 4
Alignment:
Q  177 tgattatgataaagactaacccccttaccttaattatc 214  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41 tgattatgatgaacactaacccccttaccttaattatc 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 193429 - 193396
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaa 209  Q
    ||||||||||||||||||||||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaa 193396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 6475 - 6443
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttacctta 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 910 - 878
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttacctta 878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 9914 - 9882
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttacctta 9882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 13317 - 13285
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  13317 atgattatgataaagactaacccccttacctta 13285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 57424 - 57392
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  57424 atgattatgataaagactaacccccttacctta 57392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||||| | ||||||||    
T  70348 ttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 55904 - 55936
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttacctta 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 108107 - 108075
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||||||||||||||||||||||    
T  108107 atgattatgataaagactaacccccttacctta 108075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 18015 - 18058
Alignment:
Q  165 acaaaatgatgatgattatgataaagactaacccccttacctta 208  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttacctta 18058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 45197 - 45370
Alignment:
Q  37 aaacatgtaatttaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggggcacgaatttagcaacaatcatccat-a 135  Q
    ||||||||||||| ||| ||||||||||| |||| ||||||||||||| |  || ||| ||||| |    ||||||||||||| ||||||| || ||| |    
T  45197 aaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatca 45296  T
Q  136 atcaaaattcatacaacatttgaaaatttacaaaa--tgatgatgattatgataaagactaacccccttacctta 208  Q
    | | |  ||||||||||| | || || || ||| |  |||  ||||||||||| |||||||||||||||||||||    
T  45297 acccattttcatacaacaat-gagaaattgcaataattgaacatgattatgatgaagactaacccccttacctta 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 54553 - 54630
Alignment:
Q  9 tttcataacttttcatttttacatattt--aaacatgtaatttaaccaacaatcatacacttattatcaattcatgca 84  Q
    |||||||||||  ||||| |||||| ||  ||||||| ||||| ||| ||||||||||| |||| |||||||||||||    
T  54553 tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 1436 - 1371
Alignment:
Q  176 atgattatgataaagactaacccccttaccttaattatctccaactactagctctaacttcacttt 241  Q
    ||||||||||| ||  ||||||||||||||| ||||||| |||| | ||||||| | |||||||||    
T  1436 atgattatgatgaattctaacccccttacctcaattatcaccaattcctagctcaagcttcacttt 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 8216 - 8257
Alignment:
Q  77 ttcatgcatacaaacatatcatcaaagttggggcacgaattt 118  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  8216 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttacctta 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 5508 - 5476
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  5508 atgattatgatgaagactaacccccttacctta 5476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 4378 - 4346
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||||||| |||||||||||||||||    
T  4378 atgattatgataaagtctaacccccttacctta 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 17336 - 17304
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||||||||||||||| |||||||||    
T  17336 atgattatgataaagactaacccgcttacctta 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 5549 - 5581
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  5549 atgattatgatgaagactaacccccttacctta 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 34340 - 34308
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    ||||||||||| |||||||||||||||||||||    
T  34340 atgattatgatgaagactaacccccttacctta 34308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  176 atgattatgataaagactaacccccttacctta 208  Q
    |||||||||||||| ||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttacctta 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 35816 - 35872
Alignment:
Q  192 ctaacccccttaccttaattatctccaactactagctctaacttcactttggctcct 248  Q
    ||||||||||||||||||||||| |||| | ||||| | | ||||||||| ||||||    
T  35816 ctaacccccttaccttaattatcaccaattcctagcccaagcttcactttagctcct 35872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University