View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20959_low_4 (Length: 343)

Name: NF20959_low_4
Description: NF20959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20959_low_4
NF20959_low_4
[»] chr1 (58 HSPs)
chr1 (153-326)||(7889056-7889252)
chr1 (76-149)||(47544629-47544702)
chr1 (76-151)||(8396681-8396756)
chr1 (76-150)||(31821571-31821645)
chr1 (76-150)||(46641849-46641923)
chr1 (76-150)||(13202936-13203010)
chr1 (78-150)||(30320890-30320962)
chr1 (76-151)||(38261136-38261210)
chr1 (76-151)||(45622479-45622554)
chr1 (76-147)||(52861300-52861371)
chr1 (76-150)||(2249587-2249661)
chr1 (82-156)||(24003413-24003487)
chr1 (76-150)||(25702435-25702509)
chr1 (78-151)||(12105159-12105232)
chr1 (76-148)||(34038163-34038235)
chr1 (78-146)||(47693533-47693601)
chr1 (89-151)||(9587989-9588051)
chr1 (78-148)||(52180567-52180637)
chr1 (76-144)||(6966241-6966309)
chr1 (76-151)||(35873935-35874010)
chr1 (76-147)||(38718064-38718135)
chr1 (76-147)||(42275338-42275409)
chr1 (76-151)||(44263989-44264064)
chr1 (76-151)||(48976874-48976949)
chr1 (76-151)||(52345598-52345673)
chr1 (89-151)||(10348026-10348088)
chr1 (76-150)||(51787464-51787538)
chr1 (78-151)||(24230568-24230641)
chr1 (78-150)||(31530307-31530379)
chr1 (92-150)||(10408643-10408701)
chr1 (76-151)||(24511911-24511986)
chr1 (99-150)||(32144669-32144720)
chr1 (89-147)||(17525782-17525840)
chr1 (76-150)||(46362023-46362097)
chr1 (99-151)||(40054942-40054995)
chr1 (78-151)||(46235166-46235239)
chr1 (96-148)||(6468793-6468845)
chr1 (78-138)||(21883146-21883206)
chr1 (107-151)||(34100712-34100756)
chr1 (99-150)||(43916346-43916398)
chr1 (88-136)||(46707358-46707406)
chr1 (95-147)||(48760415-48760467)
chr1 (76-123)||(41541505-41541552)
chr1 (101-151)||(49982455-49982506)
chr1 (76-147)||(51056528-51056599)
chr1 (76-138)||(7227582-7227644)
chr1 (89-150)||(14152687-14152748)
chr1 (78-147)||(31084941-31085010)
chr1 (106-151)||(35305514-35305559)
chr1 (99-151)||(38207528-38207581)
chr1 (89-150)||(51610536-51610597)
chr1 (99-150)||(1845073-1845125)
chr1 (78-150)||(12178933-12179005)
chr1 (76-148)||(24381652-24381724)
chr1 (99-151)||(42958840-42958892)
chr1 (88-148)||(44382019-44382079)
chr1 (99-150)||(44808759-44808811)
chr1 (106-138)||(48796391-48796423)
[»] chr4 (47 HSPs)
chr4 (76-150)||(126910-126984)
chr4 (80-150)||(1857140-1857210)
chr4 (76-150)||(4720803-4720877)
chr4 (76-150)||(27990536-27990610)
chr4 (76-149)||(29364514-29364587)
chr4 (76-138)||(24535494-24535556)
chr4 (77-151)||(28835787-28835861)
chr4 (78-148)||(56303172-56303242)
chr4 (78-150)||(45692622-45692694)
chr4 (76-151)||(26118085-26118160)
chr4 (76-149)||(53936508-53936581)
chr4 (76-147)||(8256774-8256845)
chr4 (76-147)||(8270192-8270263)
chr4 (76-150)||(42177342-42177416)
chr4 (78-151)||(27761399-27761472)
chr4 (76-149)||(54996435-54996508)
chr4 (88-148)||(1433809-1433869)
chr4 (76-144)||(5340301-5340369)
chr4 (78-150)||(34829057-34829129)
chr4 (76-151)||(30348162-30348237)
chr4 (89-147)||(31999070-31999128)
chr4 (76-151)||(352473-352548)
chr4 (99-150)||(46663681-46663732)
chr4 (76-147)||(50733190-50733261)
chr4 (88-150)||(11038046-11038108)
chr4 (76-150)||(33491162-33491236)
chr4 (76-150)||(38008486-38008560)
chr4 (89-147)||(52607571-52607629)
chr4 (103-151)||(4491214-4491263)
chr4 (89-150)||(29582311-29582372)
chr4 (76-144)||(43735465-43735534)
chr4 (99-147)||(408418-408466)
chr4 (89-149)||(5970700-5970760)
chr4 (99-150)||(19527078-19527130)
chr4 (99-151)||(30060529-30060581)
chr4 (76-148)||(50608017-50608089)
chr4 (76-150)||(32570699-32570774)
chr4 (107-150)||(36631036-36631079)
chr4 (107-150)||(50776135-50776178)
chr4 (76-150)||(23058765-23058839)
chr4 (78-148)||(24979944-24980013)
chr4 (99-148)||(39103539-39103589)
chr4 (76-138)||(48647031-48647093)
chr4 (78-150)||(3763447-3763519)
chr4 (103-150)||(4695666-4695714)
chr4 (99-150)||(15060909-15060961)
chr4 (99-151)||(50189368-50189420)
[»] chr3 (53 HSPs)
chr3 (76-150)||(53289230-53289304)
chr3 (76-150)||(26850258-26850332)
chr3 (76-150)||(35501122-35501196)
chr3 (76-150)||(39987351-39987425)
chr3 (78-151)||(35137774-35137847)
chr3 (89-149)||(40474180-40474240)
chr3 (76-151)||(1021306-1021381)
chr3 (76-151)||(1129128-1129203)
chr3 (76-151)||(40478090-40478165)
chr3 (78-149)||(54428829-54428900)
chr3 (78-151)||(30349338-30349411)
chr3 (76-144)||(50258133-50258201)
chr3 (76-147)||(7352169-7352240)
chr3 (76-151)||(37520701-37520776)
chr3 (79-150)||(44379414-44379485)
chr3 (76-150)||(29388695-29388769)
chr3 (78-147)||(7862779-7862848)
chr3 (88-151)||(8966275-8966338)
chr3 (78-149)||(15997155-15997226)
chr3 (76-151)||(25834562-25834637)
chr3 (76-151)||(26456953-26457027)
chr3 (76-147)||(37127807-37127877)
chr3 (79-150)||(42621848-42621919)
chr3 (78-144)||(26012203-26012269)
chr3 (78-148)||(47746163-47746233)
chr3 (78-147)||(23456792-23456861)
chr3 (78-163)||(26884960-26885045)
chr3 (76-148)||(41217387-41217459)
chr3 (78-150)||(44653505-44653577)
chr3 (76-148)||(46507363-46507434)
chr3 (76-143)||(9507235-9507302)
chr3 (76-143)||(9515210-9515277)
chr3 (76-147)||(27045026-27045097)
chr3 (89-136)||(34825613-34825660)
chr3 (76-150)||(4817076-4817150)
chr3 (89-147)||(50029754-50029812)
chr3 (76-150)||(51344705-51344778)
chr3 (78-151)||(42479019-42479092)
chr3 (99-151)||(9252208-9252260)
chr3 (76-151)||(44522323-44522398)
chr3 (89-151)||(36220751-36220813)
chr3 (76-130)||(48825419-48825473)
chr3 (106-151)||(5529056-5529101)
chr3 (99-151)||(29806364-29806416)
chr3 (99-150)||(32121899-32121951)
chr3 (76-123)||(13756333-13756380)
chr3 (100-150)||(29698322-29698373)
chr3 (89-148)||(43745348-43745407)
chr3 (76-150)||(25482251-25482325)
chr3 (89-151)||(50412070-50412132)
chr3 (76-138)||(54788647-54788709)
chr3 (89-150)||(40784494-40784555)
chr3 (106-151)||(44365971-44366016)
[»] chr2 (31 HSPs)
chr2 (78-151)||(32602302-32602375)
chr2 (76-152)||(25331453-25331529)
chr2 (80-151)||(7673294-7673365)
chr2 (76-151)||(9589446-9589521)
chr2 (76-150)||(9122156-9122230)
chr2 (76-147)||(17451285-17451356)
chr2 (76-150)||(21404198-21404272)
chr2 (76-150)||(43439995-43440069)
chr2 (76-148)||(6945674-6945746)
chr2 (79-151)||(35895310-35895382)
chr2 (76-151)||(32401078-32401153)
chr2 (78-151)||(1580246-1580319)
chr2 (78-151)||(4740559-4740632)
chr2 (76-149)||(33493804-33493877)
chr2 (76-148)||(45157846-45157918)
chr2 (76-151)||(40495779-40495854)
chr2 (76-150)||(4297897-4297971)
chr2 (99-151)||(41555430-41555483)
chr2 (99-150)||(15362469-15362521)
chr2 (99-151)||(38617727-38617779)
chr2 (76-148)||(40946764-40946836)
chr2 (76-151)||(3261238-3261313)
chr2 (76-151)||(27401062-27401137)
chr2 (76-150)||(38073106-38073181)
chr2 (76-127)||(44143229-44143279)
chr2 (106-151)||(2859358-2859404)
chr2 (76-137)||(18998728-18998789)
chr2 (76-150)||(33494266-33494342)
chr2 (104-151)||(8333890-8333938)
chr2 (81-137)||(14840134-14840190)
chr2 (99-150)||(34188889-34188941)
[»] chr8 (39 HSPs)
chr8 (76-148)||(118142-118214)
chr8 (76-149)||(6982786-6982859)
chr8 (78-151)||(7128089-7128162)
chr8 (78-151)||(38210654-38210727)
chr8 (77-148)||(39646639-39646710)
chr8 (76-150)||(2261346-2261420)
chr8 (76-144)||(37675943-37676011)
chr8 (76-147)||(5328933-5329004)
chr8 (76-151)||(40579028-40579103)
chr8 (76-151)||(41720581-41720656)
chr8 (76-150)||(15451421-15451495)
chr8 (76-150)||(29454143-29454217)
chr8 (76-151)||(10706554-10706629)
chr8 (81-136)||(26521980-26522035)
chr8 (89-151)||(17792549-17792611)
chr8 (76-150)||(40776637-40776711)
chr8 (76-157)||(26988380-26988461)
chr8 (76-151)||(27847801-27847876)
chr8 (99-150)||(36672010-36672061)
chr8 (76-147)||(39300086-39300157)
chr8 (76-150)||(29265589-29265663)
chr8 (76-148)||(30777274-30777347)
chr8 (78-151)||(44000560-44000633)
chr8 (76-148)||(9497871-9497943)
chr8 (76-151)||(1043392-1043467)
chr8 (89-148)||(27172259-27172318)
chr8 (76-147)||(43841846-43841917)
chr8 (76-150)||(2749315-2749389)
chr8 (107-156)||(15231350-15231399)
chr8 (89-149)||(24937586-24937646)
chr8 (104-151)||(32887665-32887713)
chr8 (76-151)||(34634186-34634260)
chr8 (79-150)||(40267818-40267888)
chr8 (89-147)||(6630912-6630970)
chr8 (89-119)||(45452417-45452447)
chr8 (78-147)||(36667570-36667639)
chr8 (76-149)||(38329452-38329525)
chr8 (106-150)||(40547690-40547735)
chr8 (106-149)||(6804009-6804053)
[»] chr7 (41 HSPs)
chr7 (76-151)||(46575100-46575175)
chr7 (76-148)||(15716238-15716310)
chr7 (78-150)||(7574551-7574623)
chr7 (78-150)||(28264750-28264822)
chr7 (78-151)||(26605055-26605128)
chr7 (76-148)||(24952928-24953000)
chr7 (78-150)||(29606268-29606340)
chr7 (76-151)||(15954593-15954668)
chr7 (76-151)||(38665456-38665531)
chr7 (76-150)||(1269008-1269082)
chr7 (77-151)||(47642832-47642906)
chr7 (76-149)||(23406653-23406726)
chr7 (76-148)||(39558908-39558980)
chr7 (76-147)||(30076973-30077044)
chr7 (78-149)||(35291327-35291398)
chr7 (76-150)||(11750419-11750493)
chr7 (76-136)||(38666202-38666262)
chr7 (99-151)||(29688923-29688976)
chr7 (99-151)||(43631054-43631106)
chr7 (76-150)||(3214853-3214932)
chr7 (104-151)||(18520275-18520322)
chr7 (76-151)||(32529179-32529254)
chr7 (76-150)||(6791444-6791518)
chr7 (108-150)||(23561475-23561517)
chr7 (81-151)||(24812415-24812485)
chr7 (99-151)||(21919687-21919740)
chr7 (78-147)||(41968435-41968504)
chr7 (106-150)||(2291142-2291186)
chr7 (76-148)||(17306603-17306675)
chr7 (78-138)||(22967421-22967481)
chr7 (99-150)||(48460251-48460303)
chr7 (100-150)||(5215380-5215431)
chr7 (76-151)||(35358035-35358110)
chr7 (100-149)||(2089218-2089268)
chr7 (88-150)||(15591729-15591791)
chr7 (76-150)||(37504559-37504633)
chr7 (99-151)||(31743656-31743709)
chr7 (76-145)||(45232053-45232121)
chr7 (76-147)||(8577927-8577999)
chr7 (100-151)||(38882817-38882869)
chr7 (76-151)||(42584093-42584169)
[»] chr6 (28 HSPs)
chr6 (77-151)||(23416830-23416904)
chr6 (76-138)||(33574245-33574307)
chr6 (78-151)||(4509763-4509836)
chr6 (76-152)||(33574685-33574761)
chr6 (76-152)||(33574863-33574939)
chr6 (76-150)||(242885-242959)
chr6 (76-149)||(11763174-11763247)
chr6 (76-151)||(9662090-9662165)
chr6 (89-151)||(23069045-23069107)
chr6 (93-150)||(3141040-3141097)
chr6 (76-157)||(9687108-9687189)
chr6 (89-144)||(2565396-2565451)
chr6 (76-151)||(8549562-8549637)
chr6 (76-151)||(18772192-18772267)
chr6 (78-139)||(1245154-1245215)
chr6 (106-151)||(8858031-8858076)
chr6 (99-152)||(29023617-29023670)
chr6 (99-150)||(1705960-1706012)
chr6 (78-150)||(4576719-4576791)
chr6 (99-150)||(14507975-14508027)
chr6 (99-151)||(10965978-10966031)
chr6 (78-151)||(14779237-14779310)
chr6 (99-151)||(21294144-21294197)
chr6 (99-150)||(2994322-2994374)
chr6 (99-150)||(10887809-10887861)
chr6 (76-151)||(21970639-21970714)
chr6 (99-150)||(31644410-31644461)
chr6 (99-150)||(19474026-19474078)
[»] chr5 (33 HSPs)
chr5 (76-150)||(33678490-33678564)
chr5 (76-151)||(2852030-2852105)
chr5 (76-147)||(40803653-40803724)
chr5 (76-148)||(9604433-9604505)
chr5 (76-136)||(9913203-9913263)
chr5 (82-149)||(28318348-28318415)
chr5 (76-150)||(14434818-14434892)
chr5 (76-149)||(40563116-40563189)
chr5 (76-147)||(9910042-9910113)
chr5 (89-151)||(6260363-6260425)
chr5 (77-151)||(29960200-29960274)
chr5 (76-138)||(35370410-35370472)
chr5 (76-149)||(39816506-39816579)
chr5 (89-149)||(702295-702355)
chr5 (78-150)||(42597474-42597545)
chr5 (76-147)||(13119131-13119202)
chr5 (78-150)||(13127315-13127387)
chr5 (78-137)||(5360060-5360119)
chr5 (76-151)||(36427904-36427979)
chr5 (78-147)||(33210704-33210773)
chr5 (78-137)||(3426124-3426183)
chr5 (99-150)||(17069340-17069391)
chr5 (76-147)||(34259872-34259943)
chr5 (76-151)||(42486604-42486679)
chr5 (76-138)||(30753459-30753521)
chr5 (106-151)||(32455656-32455701)
chr5 (99-151)||(39939032-39939085)
chr5 (76-129)||(8258727-8258781)
chr5 (100-160)||(16432649-16432709)
chr5 (99-151)||(40756540-40756593)
chr5 (78-138)||(3024163-3024223)
chr5 (100-151)||(5204616-5204668)
chr5 (76-151)||(39979675-39979751)
[»] scaffold1319 (1 HSPs)
scaffold1319 (76-150)||(43-117)
[»] scaffold0923 (1 HSPs)
scaffold0923 (78-150)||(19-91)
[»] scaffold0667 (1 HSPs)
scaffold0667 (76-150)||(165-239)
[»] scaffold0308 (1 HSPs)
scaffold0308 (76-149)||(7536-7609)
[»] scaffold0432 (1 HSPs)
scaffold0432 (76-151)||(3031-3102)
[»] scaffold0271 (1 HSPs)
scaffold0271 (76-150)||(16992-17067)
[»] scaffold0009 (1 HSPs)
scaffold0009 (99-150)||(214494-214546)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 9e-58; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 153 - 326
Target Start/End: Complemental strand, 7889252 - 7889056
Alignment:
Q  153 taaaataacacaatcatattattgtaaggttaaggtgcatttgcaagtaatatgattggttatttaaaa-------------cgttttcctccaaagtcc 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||    
T  7889252 taaaataacacaatcatattattgtaaggttaaggtgcatttgcaagtaatatgattggttatttaaaatgttttcctaccgcgttttcctccaaagtcc 7889153  T
Q  240 tgactcaagcggttttgaacttttaatttaag----------gcttcgtgaaatgatgtttcacttgatataacaccagtgatatacatatatgttg 326  Q
    ||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7889152 tgactcaagcggttttgaacttttaatttaaggcttcgtgatgcttcgtgaaatgatgtttcacttgatataacaccactgatatacatatatgttg 7889056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 47544629 - 47544702
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47544629 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccatagaagttcc 47544702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 8396681 - 8396756
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  8396681 tgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtaccgtagaaattccct 8396756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 31821645 - 31821571
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  31821645 tgatcgttcatttataaaattaagaagcaggagtaccgctacacctcattttgtgagtgtaccgtagaagttccc 31821571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 46641849 - 46641923
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  46641849 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgcgagtgtaccgtagaagttccc 46641923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 13203010 - 13202936
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||    
T  13203010 tgatcgttcatttataaaattaagaaacaggagtaccggtacacctcattttctgagtgtacagtagaagttccc 13202936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 30320962 - 30320890
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||    
T  30320962 atcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 30320890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 38261136 - 38261210
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38261136 tgatcgttaatt-ataaaattatgaagcaggagtaccggtacacctcactttatgagtgtaccgtagaagttccct 38261210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 45622554 - 45622479
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| | || |||||||||    
T  45622554 tgatcgttcatttataaaattaagaagtaggagtaccggtacacctcattttgtgagtgtaacgtataagttccct 45622479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 52861371 - 52861300
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| || |||||    
T  52861371 tgatcgttcatttataaaattaagaagcagaagtaccggtacacctcattttgtgagtgtaccgtaaaagtt 52861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 2249661 - 2249587
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||||    
T  2249661 tgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtgagtgtaccgcagaagttccc 2249587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 24003487 - 24003413
Alignment:
Q  82 ttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctgtaaa 156  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| | |||||||| ||||||||||| |||||    
T  24003487 ttcatttataaaattaagaagcaggagtaccggaacacctcattttgttagtgtaccgtagaagttcccagtaaa 24003413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 25702509 - 25702435
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  25702509 tgatcgttgatttataaaattatgaagcaagagtaccggtacacctcaatttatgagtgtaccgtagaagttccc 25702435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 12105232 - 12105159
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  12105232 atcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 12105159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 34038235 - 34038163
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  34038235 tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttc 34038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 47693533 - 47693601
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagt 146  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  47693533 atcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccatagaagt 47693601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 9587989 - 9588051
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  9587989 ataaaattatgaagcaggagtaccggtatacctcactttatgagtgtaccgtagaagttccct 9588051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 52180567 - 52180637
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  52180567 atcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtataccatagaagttc 52180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 6966241 - 6966309
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    ||||| |||||| |||||||||||||  |||||||||||||||||||||||| |||||||||| |||||    
T  6966241 tgatcattcatttataaaattaagaatgaggagtaccggtacacctcattttgtgagtgtaccgtagaa 6966309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 35874010 - 35873935
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||| |||||||||||| |||| ||| |||||||||| ||||||||||||    
T  35874010 tgatcgttaatttataaaattatgaagcagaagtaccggtacatctcactttgtgagtgtaccgtagaagttccct 35873935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 38718064 - 38718135
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| |||||| |||||||||| ||| |||||||||| ||||||||||||| |||||||||| ||||||||    
T  38718064 tgatcattcatttataaaattaataaggaggagtaccgatacacctcattttgtgagtgtaccgtagaagtt 38718135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 42275409 - 42275338
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||| ||| |||||||||| ||||||||    
T  42275409 tgatcgttaatttataaaattatgaagcatgagtaccggtacacctcactttctgagtgtaccttagaagtt 42275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 44263989 - 44264064
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||| ||||||||||||||||||||| ||| |||||||||| |||| |||||||    
T  44263989 tgatcgttaatttataaaattatgaaacaggagtaccggtacacctcactttgtgagtgtaccgtagatgttccct 44264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 48976949 - 48976874
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||||||||||| ||||||||| ||| ||||||| || ||||||||||||    
T  48976949 tgatcgttaatttataaaattatgaagcaggagtaccgatacacctcactttgtgagtgtgccgtagaagttccct 48976874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 52345673 - 52345598
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||| || |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  52345673 tgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 52345598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 10348088 - 10348026
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||||||||||||| |||||||| | ||||| |||||||||| ||||||||||||    
T  10348088 ataaaattaagaagcaggagtatcggtacactttattttgtgagtgtaccgtagaagttccct 10348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 51787538 - 51787464
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| || ||| |||||||||||| ||| |||||||| |||||||||| ||||||||||||| |||||||||||    
T  51787538 tgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttccc 51787464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 24230641 - 24230568
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| ||||||||||||||  ||||||||| ||| |||||||||| ||||||||||||    
T  24230641 atcgttaatttataaaattatgaagcaggagtaccattacacctcactttgtgagtgtaccgtagaagttccct 24230568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 31530379 - 31530307
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||| | |||||||  |||||||||||    
T  31530379 atcgttaatttataaaattatgaagcaggagtaccagtacacctcattttgtaagtgtacggtagaagttccc 31530307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 10408643 - 10408701
Alignment:
Q  92 aaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||    
T  10408643 aaattatgaagcagaagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 10408701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 24511911 - 24511986
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||  || ||||| ||| |||||| |||||||||||||||||| |||| ||||||||| ||||| ||||||    
T  24511911 tgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaaattccct 24511986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 32144720 - 32144669
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||| ||||| ||||||| | ||||||||||||||||||||||||||    
T  32144720 gaagcaggaataccgatacaccttaatttatgagtgtaccatagaagttccc 32144669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 17525782 - 17525840
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| ||| ||||||||||||||| ||||||| | ||||||| |||||||||||||||    
T  17525782 ataaatttaggaagcaggagtaccgatacaccttaatttatgaatgtaccatagaagtt 17525840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 46362097 - 46362023
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||  | | |||||||||||||||||||| ||| |||||| |||||||||||    
T  46362097 tgatcgttaatttataaaattacgaaaaaagggtaccggtacacctcattttgtgaatgtaccgtagaagttccc 46362023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 40054942 - 40054995
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  40054942 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 40054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 46235166 - 46235239
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| |||| | | ||||| |||||||||||||| | |||||||| ||||||||||||    
T  46235166 atcgttaatttataaaattatgaagaaagggtaccagtacacctcattttgtaagtgtaccgtagaagttccct 46235239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 6468845 - 6468793
Alignment:
Q  96 taagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||||||||||||| | | ||||| |||||||||| |||||||||    
T  6468845 taagaagcaggagtaccggtacgctttattttgtgagtgtaccgtagaagttc 6468793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 21883146 - 21883206
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||| ||| ||||||||| |||| | |||||||||||||||||| ||||| ||||||||    
T  21883146 atcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtacc 21883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 34100756 - 34100712
Alignment:
Q  107 agtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||    
T  34100756 agtaccggtacacctcaatttacaagtgtaccatagaagttccct 34100712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 43916398 - 43916346
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  43916398 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 43916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 46707406 - 46707358
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 136  Q
    |||||| ||| ||||||||||||||||||||||| | ||||||||||||    
T  46707406 cataaatttaggaagcaggagtaccggtacaccttaatttatgagtgta 46707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 48760415 - 48760467
Alignment:
Q  95 ttaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||  ||||||||||||| |||||||||| |||||||||| ||||||||    
T  48760415 ttaagaatgaggagtaccggtatacctcattttgtgagtgtaccgtagaagtt 48760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 41541552 - 41541505
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctca 123  Q
    |||||||| ||||||||| ||| |||||| ||||||||||||||||||    
T  41541552 tgatcgttaattcataaatttatgaagcaagagtaccggtacacctca 41541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 49982506 - 49982455
Alignment:
Q  101 agcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    |||||||||| |||||||||||| ||||||| ||||||| ||||||||||||    
T  49982506 agcaggagtatcggtacacctcaatttatgaggtgtaccgtagaagttccct 49982455  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 51056528 - 51056599
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||  ||||| |||||||||||||||||||| |||| ||| ||| |||||| ||||||||    
T  51056528 tgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttgtgattgtaccgtagaagtt 51056599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 7227644 - 7227582
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||| ||| ||||||||| |||| | ||||| || ||||||||||||| ||||||||||    
T  7227644 tgatcgttaatttataaaattatgaagaaagagtatcgatacacctcattttgtgagtgtacc 7227582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 14152748 - 14152687
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||  ||||| ||||||||||| |||| ||||| ||||| |||| |||||||||||    
T  14152748 ataaaattattaagcaagagtaccggtataccttattttgtgagtataccgtagaagttccc 14152687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 31084941 - 31085010
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| ||| |||||||||||| | | |||||||| ||||| |||| || |||||||||| ||||||||    
T  31084941 atcgttaatttataaaattaagatgtaagagtaccgatacacttcatcttgtgagtgtaccgtagaagtt 31085010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 35305514 - 35305559
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||||||| | |||| ||||||||| ||||||||||||    
T  35305514 gagtaccggtacaccttaatttacgagtgtaccgtagaagttccct 35305559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 38207581 - 38207528
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgag-tgtaccatagaagttccct 151  Q
    ||||||| ||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  38207581 gaagcagaagtaccgatacacctcaatttatgaggtgtaccgtagaagttccct 38207528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 51610597 - 51610536
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| ||| |||||| |||||||| ||||||||| |||| || |||||| |||||||||||    
T  51610597 ataaatttatgaagcaagagtaccgatacacctcaatttacgaatgtaccgtagaagttccc 51610536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 1845125 - 1845073
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||| ||| ||| ||| |||||||||||    
T  1845125 gaagcaggagtaccggtacacctcaatttgtgaggtgcaccgtagaagttccc 1845073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 12178933 - 12179005
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||| | ||| |||||| |||||||||||||||||| |||  ||||||||| || ||||||||    
T  12178933 atcgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtaccgtaaaagttccc 12179005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 24381652 - 24381724
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| ||| ||||||||| ||| |  |||||||||||||| ||  ||| |||||||||| |||||||||    
T  24381652 tgatcgttaatttataaaattatgaaacgagagtaccggtacacttcgctttgtgagtgtaccgtagaagttc 24381724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 42958892 - 42958840
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||||||||||||| |||| |||| ||||||| ||||||| ||||||    
T  42958892 gaagcaagagtaccggtacatctcaatttacgagtgtatcatagaaattccct 42958840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 44382079 - 44382019
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| ||| || |||||||||||||||| | |||||||||||||| || ||||||    
T  44382079 cataaatttaggaaacatgagtaccggtacaccttaatttatgagtgtaccgtaaaagttc 44382019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 44808759 - 44808811
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgag-tgtaccatagaagttccc 150  Q
    |||||||||||| |||||||||||| ||| |||| |||||| |||||||||||    
T  44808759 gaagcaggagtatcggtacacctcaatttgtgagatgtaccgtagaagttccc 44808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 48796391 - 48796423
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtacc 138  Q
    ||||||||||||||||||||||| |||||||||    
T  48796391 gagtaccggtacacctcattttacgagtgtacc 48796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 126910 - 126984
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  126910 tgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtaccgtagaagttccc 126984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 1857140 - 1857210
Alignment:
Q  80 cgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1857140 cgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 1857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 4720803 - 4720877
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||    
T  4720803 tgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtaccgtataagttccc 4720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 27990610 - 27990536
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  27990610 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtatcgtagaagttccc 27990536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 29364514 - 29364587
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||    
T  29364514 tgatcgttcattcataaaattaaaaagcaggagtaccggtacacctcattttgtgagtgtacagtagaagttcc 29364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 24535556 - 24535494
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24535556 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtacc 24535494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 28835861 - 28835787
Alignment:
Q  77 gatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||||||| |||||||||| || |||||||||    
T  28835861 gatcgttcatttataaaattaagaagcaggagtaccagttcacctcattttgtgagtgtaccgtaaaagttccct 28835787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 56303172 - 56303242
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56303172 atcgttaatttataaaattataaagcaggagtaccggtacacctcactttatgagtgtaccatagaagttc 56303242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 45692694 - 45692622
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||| ||||||||| |||||||||||    
T  45692694 atcgttcatttataaaattaagaagcaagagtatcggtacaccttattttacgagtgtaccgtagaagttccc 45692622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 26118085 - 26118160
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||||| ||||||||||||    
T  26118085 tgatcgttgatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtagaagttccct 26118160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 53936581 - 53936508
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| |||||||||||| ||| |||||||| |||||||||| ||||||||||||| ||||||||||    
T  53936581 tgatcgttaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttcc 53936508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 8256774 - 8256845
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| |||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||| || |||||    
T  8256774 tgatcattcatttataaaattaagaaggaggagtaccgatacacctcattttgtgagtgtaccgtaaaagtt 8256845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 8270192 - 8270263
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| |||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||| || |||||    
T  8270192 tgatcattcatttataaaattaagaaggaggagtaccgatacacctcattttgtgagtgtaccgtaaaagtt 8270263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 42177416 - 42177342
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||| | |||||||| ||||||||||||| |||||||||| |||||||||||    
T  42177416 tgatcgttaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtagaagttccc 42177342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 27761472 - 27761399
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||||||||||||| |||||| |||||||| ||||||||| ||| |||||||||| ||||| ||||||    
T  27761472 atcgttaattcataaaattatgaagcaagagtaccgatacacctcactttgtgagtgtaccgtagaaattccct 27761399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 54996435 - 54996508
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| ||||||||| ||| ||||||||||| ||||||||| ||||||| ||||| |||||||||||    
T  54996435 tgatcgttaatttataaaattatgaaacaggagtaccgttacacctcactttatgaatgtactatagaagttcc 54996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 1433869 - 1433809
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  1433869 cataaatttaggaagcaggaataccggtacaccttaatttatgagtgtaccatagaagttc 1433809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 5340301 - 5340369
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| | ||| ||||||||||| ||||    
T  5340301 tgatcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtaccacagaa 5340369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 34829057 - 34829129
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||||| ||||| |||||    
T  34829057 atcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtagaaattccc 34829129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 30348237 - 30348162
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| | |||||||||||||||||||||| ||| |||||| ||| ||||||||    
T  30348237 tgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgattgtaccgtagtagttccct 30348162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 31999070 - 31999128
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||||||| |||||| |||||||| ||||||||| |||||||||||||| ||||||||    
T  31999070 ataaaattatgaagcaagagtaccgatacacctcactttatgagtgtaccgtagaagtt 31999128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 352548 - 352473
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||| |||||||| |||||||||||| ||| ||||||||||   ||||||||||    
T  352548 tgatcgttaatttataaaattatgaaacaggagtatcggtacacctcactttgtgagtgtaccgcggaagttccct 352473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 46663681 - 46663732
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||||    
T  46663681 gaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccc 46663732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 50733190 - 50733261
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| |||||||||| || ||||||||||| |||| || ||||| |||||||||| | ||||||    
T  50733190 tgatcgttcatttataaaattaaaaaacaggagtaccgatacatcttattttgtgagtgtaccgtggaagtt 50733261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 11038108 - 11038046
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| |||||||||||||||| |||||||||| | ||||||||| | || |||||||||||    
T  11038108 cataaatttaagaagcaggagtatcggtacaccttaatttatgagtttgccgtagaagttccc 11038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 33491236 - 33491162
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||  ||||| |||||||||||||||||||| |||| ||| ||| |||||| |||||||||||    
T  33491236 tgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttgtgaatgtaccgtagaagttccc 33491162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 38008486 - 38008560
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||| | ||||| || ||||||||||||| |||||| ||| |||||||||||    
T  38008486 tgatcgttaatttataaaattatgaagaaagagtatcgatacacctcattttgtgagtgcaccgtagaagttccc 38008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 52607629 - 52607571
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||| ||||||||||||||||||| || ||| |||||| ||||||||    
T  52607629 ataaaattaagatgcaagagtaccggtacacctcatcttgtgaatgtaccgtagaagtt 52607571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 4491214 - 4491263
Alignment:
Q  103 caggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  4491214 caggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccct 4491263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 29582311 - 29582372
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||| |||| |  ||||||||||||||||| ||| |||||||||| |||||||||||    
T  29582311 ataaaattatgaaggaaaagtaccggtacacctcaatttgtgagtgtaccgtagaagttccc 29582372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 43735465 - 43735534
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaa 144  Q
    |||||||| ||| |||||||||||| ||| ||||||||||| ||||||| |||||| ||||||| |||||    
T  43735465 tgatcgttaatttataaaattaagatgcaagagtaccggtatacctcatcttatgaggtgtaccgtagaa 43735534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 408418 - 408466
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||||||||    
T  408418 gaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagtt 408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 5970760 - 5970700
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    ||||||||| |||||| ||||||||||||| |||| | | |||||||||| ||||||||||    
T  5970760 ataaaattatgaagcaagagtaccggtacatctcactatgtgagtgtaccgtagaagttcc 5970700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 19527078 - 19527130
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  19527078 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 19527130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 30060581 - 30060529
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||||| |||||||||||| |||| ||||||||| ||||||||||||    
T  30060581 gaagcaagagtatcggtacacctcaatttacgagtgtaccgtagaagttccct 30060529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 50608017 - 50608089
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||| ||| ||| ||||||||| |||| | |||||  ||||||||||||||| |||||||||| |||||||||    
T  50608017 tgattgttaatttataaaattatgaagaaagagtattggtacacctcattttgtgagtgtaccgtagaagttc 50608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 32570699 - 32570774
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||| ||| |||| | |||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  32570699 tgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 32570774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 36631079 - 36631036
Alignment:
Q  107 agtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||    
T  36631079 agtaccgttacacctcattttgtgagtgtaccgtagaagttccc 36631036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 50776135 - 50776178
Alignment:
Q  107 agtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  50776135 agtaccgatacacctcattttataagtgtaccgtagaagttccc 50776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 23058839 - 23058765
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| |||  ||||| || |||||  ||||||||||||| |||| ||| |||||||||| |||||||||||    
T  23058839 tgatcgttaatttgtaaaagtatgaagcgagagtaccggtacatctcactttgtgagtgtaccgtagaagttccc 23058765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 24980013 - 24979944
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| ||||||| | ||||||  ||||||||||||||| ||||| |||||||||| |||||||||    
T  24980013 atcgttaatttataaaat-atgaagcaatagtaccggtacaccttattttgtgagtgtaccgtagaagttc 24979944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 39103589 - 39103539
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttc 148  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||    
T  39103589 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttc 39103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 48647093 - 48647031
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||| ||| ||||||||| ||| ||  ||||||  ||||||||||||||||||||||||    
T  48647093 tgatcgttaatttataaaattatgaaacaaaagtaccaatacacctcattttatgagtgtacc 48647031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 3763447 - 3763519
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| |||| |  ||||||| ||||||| ||||| |||||||||  |||||||||||    
T  3763447 atcgttaatttataaaattatgaagaaaaagtaccgatacaccttattttgtgagtgtacggtagaagttccc 3763519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 4695666 - 4695714
Alignment:
Q  103 caggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||| ||||||| ||||||| ||||||| |||||||||||    
T  4695666 caggagtaccggtgcacctcaatttatgaggtgtaccctagaagttccc 4695714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 15060909 - 15060961
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgag-tgtaccatagaagttccc 150  Q
    ||||||||||||||| | ||||||| |||||||| |||||| |||||||||||    
T  15060909 gaagcaggagtaccgatgcacctcaatttatgagatgtaccgtagaagttccc 15060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 50189368 - 50189420
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||| ||||||||||| |||| ||||||||  ||||||||||||    
T  50189368 gaagcaagagtactggtacacctcaatttacgagtgtactgtagaagttccct 50189420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 53289304 - 53289230
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  53289304 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 53289230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 26850258 - 26850332
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26850258 tgatcgttcatttataaaattaagaagtaggagtaccgatacacctcattttataagtgtaccatagaagttccc 26850332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 35501122 - 35501196
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35501122 tgatcgtttatttatagaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccatagaagttccc 35501196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 39987425 - 39987351
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  39987425 tgatcattcatttataaaattaagaaacaggagtaccggtacacctcattttatgagtgtcccgtagaagttccc 39987351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 35137774 - 35137847
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||    
T  35137774 atcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccct 35137847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 40474180 - 40474240
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40474180 ataaaattatgaagcaggagtaccggtacacctcactttatgagtgtaccatagaagttcc 40474240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 1021306 - 1021381
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||||||| | ||||||||||||    
T  1021306 tgatcgttcatttataaaattaggaagcaggagtaccgatacacctcattttgtgagtgtatcgtagaagttccct 1021381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 1129203 - 1129128
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  1129203 tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 1129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 40478090 - 40478165
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  40478090 tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 40478165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 54428829 - 54428900
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||    
T  54428829 atcgttcatttataaaattaagaaacaggagtatcggtacacctcattttatgagtgtacagtagaagttcc 54428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 30349338 - 30349411
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||| ||||||||||||||||| ||||||| ||||| ||||||| |||||||||| ||||||||||||    
T  30349338 atcgttcatttataaaattaagaagcagaagtaccgatacacttcattttgtgagtgtaccgtagaagttccct 30349411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 50258133 - 50258201
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||| |||||    
T  50258133 tgatcgttcattcataaaattaagaagcatgaataccgatacacctcattttgtgagtgtaccgtagaa 50258201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 7352240 - 7352169
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||  |||||||    
T  7352240 tgatcgttcatttataaaattaagaagcaggagtaccgatacatctcattttgtgagtgtaccgcagaagtt 7352169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 37520776 - 37520701
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| | |||||||||||||||||||||| |||||||||| ||||||||||||    
T  37520776 tgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 37520701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 44379485 - 44379414
Alignment:
Q  79 tcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  44379485 tcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 44379414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 29388769 - 29388695
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| |||||| |||||||||||||| |||||||| ||||||||||||||| ||||| |||| |||||||||||    
T  29388769 tgatctttcatttataaaattaagaagtaggagtactggtacacctcattttgtgagtataccgtagaagttccc 29388695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 7862779 - 7862848
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  7862779 atcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgaatgtaccatagaagtt 7862848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 8966275 - 8966338
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  8966275 cataaatttaggaagcaggagtaccggtacaccttaatttatgagtgtaccgtagaagttccct 8966338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 15997155 - 15997226
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||| ||| |||||||||||| ||  ||||||||||||||||||| ||||||||||||| ||||||||||    
T  15997155 atcgttaatttataaaattaagatgcgagagtaccggtacacctcatcttatgagtgtaccgtagaagttcc 15997226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 25834562 - 25834637
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||  ||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  25834562 tgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttatgagtgtaccgtagaagttccct 25834637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 26457027 - 26456953
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| ||||||||||||||||| ||||||| |||||||||||| | ||||||||||||    
T  26457027 tgatcgttaatttataaaattatgaagcaggagtaccggttcacctcactttatgagtgta-cgtagaagttccct 26456953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 37127877 - 37127807
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  37127877 tgatcgttaatttataaaattatgaagcag-agtactggtacacctcattttatgagtgtaccgtagaagtt 37127807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 42621919 - 42621848
Alignment:
Q  79 tcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| ||| ||||||||| |||||| |||||| ||||||||||||||| |||||||||| |||||||||||    
T  42621919 tcgttaatttataaaattatgaagcaagagtactggtacacctcattttgtgagtgtaccgtagaagttccc 42621848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 26012269 - 26012203
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    |||||||||| ||||||||||||||||||||||  | ||||||||||||| |||||||||| |||||    
T  26012269 atcgttcatttataaaattaagaagcaggagtattgatacacctcattttgtgagtgtaccgtagaa 26012203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 47746163 - 47746233
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||| ||| ||||||||| |||||| ||||| |||||||||||||||| |||||||||| |||||||||    
T  47746163 atcgttaatttataaaattatgaagcaagagtatcggtacacctcattttgtgagtgtaccgtagaagttc 47746233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 23456792 - 23456861
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| ||| ||||||||| |||| |||||||||||||||||||| ||| |||||||||| ||||||||    
T  23456792 atcgttaatttataaaattatgaagaaggagtaccggtacacctcactttgtgagtgtaccgtagaagtt 23456861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 26885045 - 26884960
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctgtaaaataacac 163  Q
    |||||| ||| |||||||||||| | | ||||||||||||||||||| || |||||||||| |||||||||||   ||||||||||    
T  26885045 atcgttaatttataaaattaagatgtaagagtaccggtacacctcatcttgtgagtgtaccgtagaagttccccaaaaaataacac 26884960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 41217387 - 41217459
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    ||||| |||||| |||||||||||||||||||||| |  ||||||| ||||| |||||||||| |||||||||    
T  41217387 tgatcattcatttataaaattaagaagcaggagtatcaatacaccttattttgtgagtgtaccgtagaagttc 41217459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 44653505 - 44653577
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| |||  | |||||||||||||||||||||| |||||||||| |||||||||||    
T  44653505 atcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 44653577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 46507434 - 46507363
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| |||||||||| || ||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  46507434 tgatcgttcatttataaaattaaaaaacag-agtaccgatacacctcattttgtgagtgtaccgtagaagttc 46507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 9507235 - 9507302
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccataga 143  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||||| ||||    
T  9507235 tgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtaga 9507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 9515210 - 9515277
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccataga 143  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||||| ||||    
T  9515210 tgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtaga 9515277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 27045026 - 27045097
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| | || |||||||||||| ||||||||||| |||||||||| ||||||||    
T  27045026 tgatcgttaatttataaaattatgtagaaggagtaccggtgcacctcattttgtgagtgtaccgtagaagtt 27045097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 34825613 - 34825660
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 136  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  34825613 ataaaattaagaagcagaagtaccggtacacctcattttgtgagtgta 34825660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 4817150 - 4817076
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| |||||||||  ||| | |||||||||||||||||||||| |||||||||| ||||| |||||    
T  4817150 tgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtaccgtagaaattccc 4817076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 50029812 - 50029754
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| ||| ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  50029812 ataaatttaggaagcaggagtaccgatacaccttagtttatgagtgtaccatagaagtt 50029754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 51344705 - 51344778
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| | ||| | |||||||| |||||||||||    
T  51344705 tgatcgttaatt-ataaaattatgaagcaggagtaccggtacaccttactttgtaagtgtaccgtagaagttccc 51344778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 42479019 - 42479092
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| ||| || |||||||||||||||| ||||| ||| |||||| ||||||||||||    
T  42479019 atcgttaatttataaaattatgaaacaagagtaccggtacaccttattttgtgaatgtaccgtagaagttccct 42479092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 9252208 - 9252260
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  9252208 gaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccct 9252260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 44522323 - 44522398
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| | | ||||||||| |||| | ||||| |||||||||||||||| ||||||||| |||||| ||||||    
T  44522323 tgatcgttaaattataaaattatgaagaaagagtatcggtacacctcattttgtgagtgtactatagaaattccct 44522398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 36220751 - 36220813
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||| ||||||  |||| |||||||||||| ||| |||||||||| ||||||||||||    
T  36220751 ataaaattatgaagcaaaagtatcggtacacctcactttgtgagtgtaccgtagaagttccct 36220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 48825473 - 48825419
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatg 130  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| |||||    
T  48825473 tgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttatg 48825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 5529056 - 5529101
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||    
T  5529056 gagtaccggtacacctcattttaagagtgtaccgtagaagctccct 5529101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 29806364 - 29806416
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||||||||||||||| |||  ||||||||| ||||||||||||    
T  29806364 gaagcaagagtaccggtacacctcaatttgcgagtgtaccgtagaagttccct 29806416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 32121951 - 32121899
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  32121951 gaagcaggagtaccggtacacctcactttgtgaggtgtaccgtagaagttccc 32121899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 13756380 - 13756333
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctca 123  Q
    |||||||||||| |||||||||||||  |||||||||| |||||||||    
T  13756380 tgatcgttcatttataaaattaagaataaggagtaccgatacacctca 13756333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 29698373 - 29698322
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  29698373 aagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 29698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 43745407 - 43745348
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    ||||||||| ||||||| ||||||||||||||||| ||| | | |||||| |||||||||    
T  43745407 ataaaattatgaagcagaagtaccggtacacctcactttgtaaatgtaccgtagaagttc 43745348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 25482325 - 25482251
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| || ||| |||||||||||| ||| || |||||||||||||||| || | |||||||| ||||| |||||    
T  25482325 tgatcattaatttataaaattaagatgcaagaataccggtacacctcatcttgtaagtgtaccgtagaaattccc 25482251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 50412132 - 50412070
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||| |||| | |||||||| ||||||||||||| |||||||||| || || ||||||    
T  50412132 ataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtataaattccct 50412070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 54788647 - 54788709
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||| ||| || ||||||  |||||||||||| ||||||||||| ||| ||||||||||    
T  54788647 tgatcgttaatttattaaattataaagcaggagtactggtacacctcactttgtgagtgtacc 54788709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 40784555 - 40784494
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||| ||||||  | ||||| |||| ||||||||||||||||||  |||||||||||    
T  40784555 ataaaattatgaagcaaaaataccgatacatctcattttatgagtgtactgtagaagttccc 40784494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 44365971 - 44366016
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||||||| | |||| | ||||||||||||||||||||    
T  44365971 gagtaccggtacaccttaatttacgggtgtaccatagaagttccct 44366016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 32602375 - 32602302
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  32602375 atcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 32602302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 25331529 - 25331453
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctg 152  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  25331529 tgatagttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccctg 25331453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 7673365 - 7673294
Alignment:
Q  80 cgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  7673365 cgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 7673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 9589446 - 9589521
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  9589446 tgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 9589521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 9122230 - 9122156
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||    
T  9122230 tgatcgttcatttataaaattaagaagcagaagtaccggtacaccttattttgtgagtgtaccgtagaagttccc 9122156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 17451356 - 17451285
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  17451356 tgatcgttcacttataaaattaagaagcaggagtaccggtacaccttattttgtgagtgtaccgtagaagtt 17451285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 21404272 - 21404198
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||    
T  21404272 tgatcgttcatttatataattaagaagtaggagtatcggtacacctcattttgtgagtgtaccgtagaagttccc 21404198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 43440069 - 43439995
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||| || |||||||||||    
T  43440069 tgatcgttcatttataaaattaagaagcagaagtatcggtacacctcattttgtgagtgtgccgtagaagttccc 43439995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 6945674 - 6945746
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  6945674 tgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttatgagtgtaccgtagaagttc 6945746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 35895382 - 35895310
Alignment:
Q  79 tcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  35895382 tcgttaatttataaaattatgaagcaggagtaccggtacacctcactttatgagtgtaccgtaaaagttccct 35895310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 32401153 - 32401078
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||||| ||||||||||||    
T  32401153 tgatcgttgatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtagaagttccct 32401078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 1580319 - 1580246
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||||||||||||| |||||| |||||||||||||||||| ||| |||||||||| ||||| ||||||    
T  1580319 atcgttaattcataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaaattccct 1580246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 4740559 - 4740632
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||| || ||| |||||||||||||||||| |  ||||||||||||| |||||||||  ||||||||||||    
T  4740559 atcgttcgtttatataattaagaagcaggagtatcaatacacctcattttgtgagtgtactgtagaagttccct 4740632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 33493804 - 33493877
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| |||||||||||| ||| |||||| |||||||||||| || |||||||||| || |||||||    
T  33493804 tgatcgttaatttataaaattaagatgcaagagtactggtacacctcatcttgtgagtgtaccgtaaaagttcc 33493877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 45157846 - 45157918
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| ||| ||||| ||| |||| | ||||| |||||||||||||||| |||||||||| |||||||||    
T  45157846 tgatcgttaatttataaacttatgaagaaagagtatcggtacacctcattttgtgagtgtaccgtagaagttc 45157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 40495779 - 40495854
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||| ||| ||| ||||||||||||| ||| |||| |||| ||||||||||| |||||||||  ||||||||||||    
T  40495779 tgattgttaatttataaaattaagaaacagaagtatcggtgcacctcattttgtgagtgtacagtagaagttccct 40495854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 4297971 - 4297897
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||| ||| ||| |||||||||||| ||| ||||||||||| ||||||| || |||||||||| ||||| |||||    
T  4297971 tgattgttaatttataaaattaagacgcaagagtaccggtatacctcatcttgtgagtgtaccgtagaaattccc 4297897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 41555483 - 41555430
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  41555483 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 41555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 15362521 - 15362469
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  15362521 gaagcaggagtaccggtacacctcaatttataaggtgtaccgtagaagttccc 15362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 38617779 - 38617727
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||||||||||||||| |||| ||||||||| | ||||||||||    
T  38617779 gaagcaagagtaccggtacacctcaatttacgagtgtaccgttgaagttccct 38617727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 40946836 - 40946764
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| ||| ||||||||| |||| |  |||||||||||| | || |||||||||||||| |||||||||    
T  40946836 tgatcgttaatttataaaattatgaagtaatagtaccggtacaacccactttatgagtgtaccgtagaagttc 40946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 3261238 - 3261313
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| |||  |||||| | |||||  ||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  3261238 tgatcgttaatttgtaaaatcatgaagcgagagtaccggtacatctcactttatgaatgtaccgtagaagttccct 3261313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 27401062 - 27401137
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| | ||||| | |||||||||||||| | | ||||||||| |||||||||    
T  27401062 tgatcgttaatttataaaattatgaagaaagagtatcagtacacctcattttgtaaatgtaccataaaagttccct 27401137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 38073181 - 38073106
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||| ||| |||| | |||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  38073181 tgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 38073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 44143279 - 44143229
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcatttt 127  Q
    |||||||| ||| ||||||| ||||| |||||||||||||||||||||||||    
T  44143279 tgatcgtttatttataaaat-aagaaacaggagtaccggtacacctcatttt 44143229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 2859404 - 2859358
Alignment:
Q  106 gagtaccggtacacctcattttatgag-tgtaccatagaagttccct 151  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||    
T  2859404 gagtaccggtacacctcaatttatgagatgtaccgtagaagttccct 2859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 18998789 - 18998728
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtac 137  Q
    |||||||||||  ||||||||||||||||  ||||||| | ||||| ||||| |||||||||    
T  18998789 tgatcgttcatgtataaaattaagaagcaaaagtaccgatgcacctaattttttgagtgtac 18998728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 33494266 - 33494342
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtaca--cctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||| | |||||||| |||||||| ||||  ||||| |||| ||||||||| |||||||||||    
T  33494266 tgatcgttaatttataaattaaagaagcaagagtaccgatacatacctcaatttacgagtgtaccgtagaagttccc 33494342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 8333938 - 8333890
Alignment:
Q  104 aggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  8333938 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 8333890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 14840134 - 14840190
Alignment:
Q  81 gttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtac 137  Q
    ||||||| |||||||||| ||||||||||| |  || || |||||||||||||||||    
T  14840134 gttcatttataaaattaaaaagcaggagtatcaatatacttcattttatgagtgtac 14840190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 34188889 - 34188941
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||| | | ||||||| |||||||||||    
T  34188889 gaagcaggagtaccggtacacctcaatttgtaaggtgtaccgtagaagttccc 34188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 118142 - 118214
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  118142 tgatcgttcatttatagaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccatagaagttc 118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 6982859 - 6982786
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  6982859 tgatcgttcatttataaaattaagaagcaaaagtaccgatacacctcattttatgagtgtaccatagaagttcc 6982786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 7128162 - 7128089
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  7128162 atcgttcatttatagaattaagaagcaggagtatcggtacacctcattttgtgagtgtaccatagaagttccct 7128089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 38210654 - 38210727
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||    
T  38210654 atcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccct 38210727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 39646710 - 39646639
Alignment:
Q  77 gatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||    
T  39646710 gatcgttcatttataaaattaagaagtaggagtaccggtacaccttattttataagtgtaccgtagaagttc 39646639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 2261346 - 2261420
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| | ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2261346 tgatcgttaatttacaaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccatagaagttccc 2261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 37676011 - 37675943
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  37676011 tgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtgagtgtaccgtagaa 37675943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 5328933 - 5329004
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||    
T  5328933 tgatcattcatttataaaattaagaagcaggagtaccgggacacctcattttataaatgtaccgtagaagtt 5329004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 40579028 - 40579103
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||| ||||||| ||||||||||  |||||||||||    
T  40579028 tgatcgttcatttataaaattaagaagcagaagtaccgatacacttcattttgtgagtgtaccgcagaagttccct 40579103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 41720581 - 41720656
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| |||||||||| ||| || |||||||||| |||||||||| |||||||||| ||||||||||||    
T  41720581 tgatcgttcatttataaaattaaaaagtagaagtaccggtatacctcattttgtgagtgtaccgtagaagttccct 41720656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 15451495 - 15451421
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| |||||||||||| ||| ||||||||||||||||||| || |||||||| |||||||||||||    
T  15451495 tgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaacatagaagttccc 15451421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 29454217 - 29454143
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||| | ||| |||||||||| |||||||||||    
T  29454217 tgatcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtaccgtagaagttccc 29454143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 10706629 - 10706554
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||||| ||||||| |||||||||| ||| |||||||||| ||||||||||||    
T  10706629 tgatcgttaatttataaaattatgaagcaagagtaccagtacacctcactttgtgagtgtaccgtagaagttccct 10706554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 26522035 - 26521980
Alignment:
Q  81 gttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 136  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  26522035 gttcatttataaaattaagaagcaggagtactggtacacctcattttgtgagtgta 26521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 17792549 - 17792611
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||| ||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  17792549 ataaatttaggaagcaggagtaccgatacaccttaatttatgagtgtaccatagaagttccct 17792611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 40776711 - 40776637
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||||||||||| ||||||| |||| ||| |||||||||||||||| |||||    
T  40776711 tgatcgttaatttataaaattatgaagcaggagtatcggtacatctcactttgtgagtgtaccatagaaattccc 40776637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 26988461 - 26988380
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctgtaaaa 157  Q
    |||||||| ||| |||||||||||| ||| |||||| |||||||||||| || |||||||||| || ||||||| |||||||    
T  26988461 tgatcgttaatttataaaattaagatgcaagagtacaggtacacctcatcttgtgagtgtaccgtaaaagttccatgtaaaa 26988380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 27847801 - 27847876
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||| |||| ||||||||||||| ||| ||||| ||||||||||||||| |||| ||||| ||||| ||||||    
T  27847801 tgatcgtccatttataaaattaagaaacagaagtactggtacacctcattttgtgagcgtaccctagaaattccct 27847876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 36672061 - 36672010
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  36672061 gaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagttccc 36672010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 39300157 - 39300086
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| || ||| ||||||||| |||||| |||||||||||||||||||||| |||||||||| || |||||    
T  39300157 tgatcattaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtaaaagtt 39300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 29265663 - 29265589
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| ||| || |||||||||||||||||| ||| |||||||||  |||||||||||    
T  29265663 tgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtacagtagaagttccc 29265589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 30777347 - 30777274
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttc 148  Q
    |||||||| ||||||||| |||  ||||||||||| |||||||||||| ||||||| ||||||| |||||||||    
T  30777347 tgatcgttaattcataaatttataaagcaggagtatcggtacacctcaatttatgaggtgtaccgtagaagttc 30777274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 44000633 - 44000560
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| |||| | |||||||| ||||||||||||| |||||||||| |||||| |||||    
T  44000633 atcgttaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtagaagatccct 44000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 9497871 - 9497943
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    ||||| || ||| |||||||||||| ||| |||||||| |||||||||| || |||||||||| |||||||||    
T  9497871 tgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttgtgagtgtaccgtagaagttc 9497943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 1043392 - 1043467
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||  ||||||||| ||||||||| |||| || ||||||| ||| |||||||||| ||||||||||||    
T  1043392 tgatcgttaatatataaaattatgaagcaggaataccagtgcacctcactttgtgagtgtaccgtagaagttccct 1043467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 27172259 - 27172318
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    ||||| ||| ||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  27172259 ataaatttaggaagcaggagtaccgatacaccttaatttattagtgtaccatagaagttc 27172318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 43841917 - 43841846
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| |||| | |||||||  ||||||| |||||||||||||||| ||||||||    
T  43841917 tgatcgttaatttataaaattatgaagaaagagtaccaatacaccttattttatgagtgtaccgtagaagtt 43841846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 2749389 - 2749315
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| | |  | |||||||||||||||||||||| ||||| |||| |||||||||||    
T  2749389 tgatcgttaatttataaaattatgcaaaaagagtaccggtacacctcattttgtgagtttaccgtagaagttccc 2749315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 15231350 - 15231399
Alignment:
Q  107 agtaccggtacacctcattttatgagtgtaccatagaagttccctgtaaa 156  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||| ||||    
T  15231350 agtaccggtacacctcactttatgagtgtaccgtagaagtttcctttaaa 15231399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 24937646 - 24937586
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    ||||| ||||||||||||||||||  ||||||| | ||||| |||||||||||||| ||||    
T  24937646 ataaatttaagaagcaggagtaccaatacaccttaatttataagtgtaccatagaaattcc 24937586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 32887713 - 32887665
Alignment:
Q  104 aggagtaccggtacacctcattttatgag-tgtaccatagaagttccct 151  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  32887713 aggagtaccggtacacctcaatttatgagatgtaccgtagaagttccct 32887665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 34634186 - 34634260
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||  | ||||||||||||| |||||||| | |||||||| ||||||||||||    
T  34634186 tgatcgttaatttataaaattatgaaaaaagagtaccggtacatctcattttgt-agtgtaccgtagaagttccct 34634260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 40267818 - 40267888
Alignment:
Q  79 tcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||| |||||||||||||| || | ||| | ||||||||||||| | |||||||| |||||||||||    
T  40267818 tcgttcatttataaaattaagaagtagaa-tactgatacacctcattttgtaagtgtaccgtagaagttccc 40267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 6630970 - 6630912
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||| || |||||||| ||||||| || ||||| |||||||||||||    
T  6630970 ataaaattaagatgcaagactaccggtatacctcatcttgtgagtataccatagaagtt 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 45452447 - 45452417
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacac 119  Q
    |||||||||||||||||||||||||||||||    
T  45452447 ataaaattaagaagcaggagtaccggtacac 45452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 36667570 - 36667639
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||| |||||||||||||||| || || || || ||||||||||| |||| |||| || |||||    
T  36667570 atcgttcatttataaaattaagaagcacgaatatcgatagacctcattttacgagtctaccgtacaagtt 36667639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 38329525 - 38329452
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| |||||||||  ||||  ||||||||||| | |||| ||| |||||||||| ||||||||||    
T  38329525 tgatcgttaatttataaaattataaagcgagagtaccggtatatctcactttgtgagtgtaccgtagaagttcc 38329452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 40547735 - 40547690
Alignment:
Q  106 gagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||||||||||||||||| | | |||||||||||||||||||    
T  40547735 gagtaccggtacacctcattttgttaggtgtaccatagaagttccc 40547690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 6804053 - 6804009
Alignment:
Q  106 gagtaccggtacacctcattttatga-gtgtaccatagaagttcc 149  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||    
T  6804053 gagtaccggtacacctcaatttatgaggtgtaccatagatgttcc 6804009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 46575175 - 46575100
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  46575175 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgaatgtaccgtagaagttccct 46575100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 15716238 - 15716310
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  15716238 tgatcgttcatttataaaattaagaagtaggagtaccggtacacctcattttgtgagtgtaccgtagaagttc 15716310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 7574623 - 7574551
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||    
T  7574623 atcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 7574551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 28264822 - 28264750
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||    
T  28264822 atcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 28264750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 26605128 - 26605055
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  26605128 atcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 26605055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 24953000 - 24952928
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| |||||||||||||| |||| |||||||||| |||||||| |||||||||| |||||||||    
T  24953000 tgatcgttcatttataaaattaagaagtaggaataccggtacatctcattttgtgagtgtaccgtagaagttc 24952928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 29606340 - 29606268
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| |||||||||||||||| |||| || |||||||||||||| |||||||||| |||||||||||    
T  29606340 atcgttcatttataaaattaagaagcaagagtcccagtacacctcattttgtgagtgtaccgtagaagttccc 29606268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 15954593 - 15954668
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| | |||||||||||||||||||||| |||||||||| ||||||||||||    
T  15954593 tgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 15954668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 38665531 - 38665456
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||||| | | ||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  38665531 tgatcgttcatttataaaattaaggaaccggagtaccggtacacttcattttgtgagtgtaccgtagaagttccct 38665456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 1269082 - 1269008
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||| || ||||||||||||||||||  ||||| ||||||||||||| |||||| |||||||||||||||    
T  1269082 tgatcgttcgtttataaaattaagaagcagggataccgatacacctcattttgtgagtgaaccatagaagttccc 1269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 47642832 - 47642906
Alignment:
Q  77 gatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||||| |||||||||||||||| |||||  |||||| |||||||| |||||||||| ||||||||||||    
T  47642832 gatcgttcatttataaaattaagaagcatgagtattggtacatctcattttgtgagtgtaccgtagaagttccct 47642906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 23406726 - 23406653
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  23406726 tgatcgttaatatataaaattatgaagcaggagtaccggtacacctcattttgtgagtgtaccgtataagttcc 23406653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 39558908 - 39558980
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| |||||||||||||| || || |||||||||||||||||||| |||||||  |||||||||    
T  39558908 tgatcgttcatttataaaattaagaagtagaaggaccggtacacctcattttataagtgtactgtagaagttc 39558980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 30076973 - 30077044
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    ||||| |||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||| || |||||    
T  30076973 tgatcattcatttataaaattaagaaggaggagtaccggcacacctcattttgtgagtgtaccgtaaaagtt 30077044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 35291398 - 35291327
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||| ||| ||||||||| |||| | |||||||||||||||||||||| |||||||||| ||||||||||    
T  35291398 atcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcc 35291327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 11750493 - 11750419
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| | ||||||||||||||||||||||||  |||| || ||||| |||||||||| |||||||||||    
T  11750493 tgatcgttcaattataaaattaagaagcaggagtaccaatacatcttattttgtgagtgtaccgtagaagttccc 11750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 38666202 - 38666262
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 136  Q
    |||||||||||| |||||||||| || ||||||||||||||||||||||||| | ||||||    
T  38666202 tgatcgttcatttataaaattaaaaaacaggagtaccggtacacctcattttgtaagtgta 38666262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 29688976 - 29688923
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  29688976 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccct 29688923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 43631106 - 43631054
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||||||||||||||| | || ||||||||||||||||||||||    
T  43631106 gaagcaagagtaccggtacacctcaatctacgagtgtaccatagaagttccct 43631054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 3214853 - 3214932
Alignment:
Q  76 tgatcgttcattcataaaattaagaagca-----ggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| ||||||     ||||||||||||||||||| ||| |||||||||| |||||||||||    
T  3214853 tgatcgttaatttataaaattatgaagcaagactggagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 3214932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 18520275 - 18520322
Alignment:
Q  104 aggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  18520275 aggagtaccggtacatctcattttgtgagtgtaccataaaagttccct 18520322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 32529254 - 32529179
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| | |||||||| ||  ||||||||| |||||||||| ||||||||||||    
T  32529254 tgatcgttaatttataaaattatgaagaaagagtaccgatatgcctcattttgtgagtgtaccgtagaagttccct 32529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 6791518 - 6791444
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||  || ||||||||| |||  | |||||||||||||||||||||| | |||||||| |||||||||||    
T  6791518 tgatcgttactttataaaattatgaaaaaagagtaccggtacacctcattttgtaagtgtaccgtagaagttccc 6791444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 23561475 - 23561517
Alignment:
Q  108 gtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  23561475 gtaccggtacacctcaatttacgagtgtaccatagaagttccc 23561517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 24812415 - 24812485
Alignment:
Q  81 gttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||| |||||||||| || ||||||||||| ||||||| ||||| | |||||| | ||||||||||||    
T  24812415 gttcatttataaaattaaaaaacaggagtaccgatacaccttattttgttagtgtatcgtagaagttccct 24812485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 21919740 - 21919687
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  21919740 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 21919687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 41968504 - 41968435
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| ||| ||||||||| |||  | |||||||| ||||||||||||| |||||||||| ||||||||    
T  41968504 atcgttaatttataaaattatgaaaaaagagtaccgatacacctcattttgtgagtgtaccgtagaagtt 41968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 2291142 - 2291186
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||    
T  2291142 gagtaccggtacacctcattttacgagtgtaccgtagaagctccc 2291186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 17306675 - 17306603
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||| |||  |||||| | |||||  ||||||||||||| |||| ||| ||||||||||||||||||||    
T  17306675 tgatcgttaatttgtaaaatcatgaagcgagagtaccggtacatctcactttgtgagtgtaccatagaagttc 17306603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 22967481 - 22967421
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||| ||| ||||||||| |||| | |||||||||||||||||| ||||| ||||||||    
T  22967481 atcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtacc 22967421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 48460303 - 48460251
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||||||||||||| |||||| ||| ||| |||||||||||||||||||    
T  48460303 gaagcaggagtaccggtatacctcaatttgtgaggtgtaccatagaagttccc 48460251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 5215380 - 5215431
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  5215380 aagcaggagtaccggtacacctcaatttgtgatgtgtaccgtagaagttccc 5215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 35358035 - 35358110
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||| || ||| |||||||||  ||| | || ||||||||||||||||||| |||||||||| ||||| ||||||    
T  35358035 tgatctttaatttataaaattattaagaaagactaccggtacacctcattttgtgagtgtaccgtagaaattccct 35358110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 2089218 - 2089268
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttcc 149  Q
    ||||| |||||||||||||||||||||||| | ||||||| ||||||||||    
T  2089218 aagcaagagtaccggtacacctcattttattaggtgtaccgtagaagttcc 2089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 15591729 - 15591791
Alignment:
Q  88 cataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||| ||||||||||||||| | ||||||| |||||| || ||||||||    
T  15591729 cataaatttaggaagcagaagtaccggtacaccttaatttatgaatgtaccgtaaaagttccc 15591791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 37504633 - 37504559
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| |||  | ||||| | |||||||||||||| |||||||||| |||||| ||||    
T  37504633 tgatcgttaatttataaaattatgaataaagagtatcagtacacctcattttgtgagtgtaccgtagaagatccc 37504559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 31743656 - 31743709
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    |||||||||||||||||||||| || ||| ||| ||||||| ||||||||||||    
T  31743656 gaagcaggagtaccggtacaccacaatttgtgaggtgtaccgtagaagttccct 31743709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 45232121 - 45232053
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaag 145  Q
    ||||| || ||| |||||||||||| ||| |||||||||||||| | || ||||||||||||| ||||||    
T  45232121 tgatcattaatttataaaattaagatgcaagagtaccggtacacat-atcttatgagtgtaccgtagaag 45232053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 8577999 - 8577927
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagtt 147  Q
    |||||||| ||| ||||| ||| |||| | |||||  ||||||||||| ||||||| ||||||||||||||||    
T  8577999 tgatcgttaatttataaatttatgaagtaagagtattggtacacctcaatttatgaggtgtaccatagaagtt 8577927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 38882869 - 38882817
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||| |||||||||||||||||||||| | | ||||||| ||||||||||||    
T  38882869 aagcaagagtaccggtacacctcattttgttaggtgtaccgtagaagttccct 38882817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 42584093 - 42584169
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||| || ||| ||||| ||| |||||||||||| |||||||| ||| ||| ||| ||||||| ||||||||||||    
T  42584093 tgatcattaatttataaatttatgaagcaggagtatcggtacacatcaatttgtgaggtgtaccgtagaagttccct 42584169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 23416830 - 23416904
Alignment:
Q  77 gatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  23416830 gatcattcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccct 23416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 33574307 - 33574245
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33574307 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtacc 33574245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 4509763 - 4509836
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  4509763 atcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 4509836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 33574685 - 33574761
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctg 152  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  33574685 tgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccctg 33574761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 33574863 - 33574939
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctg 152  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||| ||| |||||||||| |||||||||||||    
T  33574863 tgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccctg 33574939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 242959 - 242885
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| |||||||||||| ||| ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  242959 tgatcgttaatttataaaattaagatgcaagagtatcggtacacctcatcttatgagtgtaccgtagaagttccc 242885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 11763247 - 11763174
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| | | |||||||||| ||||||||||    
T  11763247 tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactctgtgagtgtaccgtagaagttcc 11763174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 9662090 - 9662165
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||| || ||| |||||||||||| ||| |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  9662090 tgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttccct 9662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 23069045 - 23069107
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||| || |||||||||    
T  23069045 ataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtaaaagttccct 23069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 3141097 - 3141040
Alignment:
Q  93 aattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||    
T  3141097 aattaagaagcaggagtatcaatacacctcattttgtgagtgtaccatagaagttccc 3141040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 9687108 - 9687189
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctgtaaaa 157  Q
    |||||||| ||| |||||||||||||| | ||||| || ||||||||||||| |||||||||| ||||||||| || |||||    
T  9687108 tgatcgttaatttataaaattaagaagaaagagtatcgatacacctcattttgtgagtgtaccgtagaagttctctataaaa 9687189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 2565396 - 2565451
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaa 144  Q
    ||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||    
T  2565396 ataaaattatgaagcaggagtaccggtacacctcactttatgaaagtaccatagaa 2565451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 8549637 - 8549562
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||  | ||||| |||||||||||||||| |||||||||| ||||||||||||    
T  8549637 tgatcgttaatttataaaattatgaaaaaagagtatcggtacacctcattttgtgagtgtaccgtagaagttccct 8549562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 18772192 - 18772267
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||||||||| |||| |||||||||| ||||| ||| ||| |||||||||| ||||||||||||    
T  18772192 tgatcgttaatttataaaattatgaagtaggagtaccgatacacttcactttgtgagtgtaccgtagaagttccct 18772267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 1245154 - 1245215
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacca 139  Q
    |||||||||| |||||||||||||| | ||||| |||||||||| ||||| |||||||||||    
T  1245154 atcgttcatttataaaattaagaaggaagagtatcggtacaccttattttgtgagtgtacca 1245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 8858031 - 8858076
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  8858031 gagtacaggtacaccacattttatgagtgtaccatagaagttccct 8858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 29023670 - 29023617
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccctg 152  Q
    |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||    
T  29023670 gaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccctg 29023617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 1705960 - 1706012
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  1705960 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 1706012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 4576719 - 4576791
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| |||  | |||||||||||||||||||||| ||||| ||| ||||||||||||    
T  4576719 atcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtctacaatagaagttccc 4576791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 14507975 - 14508027
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  14507975 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 14508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 10965978 - 10966031
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  10965978 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 10966031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 14779237 - 14779310
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||| ||| ||||||||| |||  | |||||||||||| ||||||||| |||||||||  ||||||||||||    
T  14779237 atcgttaatttataaaattatgaaaaaagagtaccggtacccctcattttgtgagtgtactgtagaagttccct 14779310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 21294144 - 21294197
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||||    
T  21294144 gaagcaggagtaccggtacacctcaatttatgaggtgtaccgtaggagttccct 21294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 2994374 - 2994322
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  2994374 gaagcaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 2994322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 10887861 - 10887809
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||| |||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  10887861 gaagtaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 10887809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 21970639 - 21970714
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| ||| | ||| |||| | |||||||||||||||  | |||||||||||||| ||||||||||||    
T  21970639 tgatcgttaatttatagatttaggaagtaagagtaccggtacaccagaatttatgagtgtaccgtagaagttccct 21970714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 31644461 - 31644410
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| |||||||| ||||||||| |||| ||||||||| |||||||||||    
T  31644461 gaagcaagagtaccgatacacctcaatttacgagtgtaccgtagaagttccc 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 19474026 - 19474078
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||| |||||||||||||||||| ||| ||| ||||||| |||||||||||    
T  19474026 gaagcaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 19474078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 33678490 - 33678564
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  33678490 tgatcattcatttataaaattaagaagcaggagtaccgatacacctcattttgtgagtgtaccatagaagttccc 33678564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 2852030 - 2852105
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  2852030 tgatcgttcatttataaaattaagaagcatgagtaccgatacacctcattttgtgagtgtaccgtagaagttccct 2852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 40803653 - 40803724
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  40803653 tgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgcaccgtagaagtt 40803724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 9604505 - 9604433
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttc 148  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  9604505 tgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtgagtgtaccgtagaagttc 9604433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 9913263 - 9913203
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 136  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9913263 tgatagttcatttataaaattaagaagcaggagtaccggtacacctcattttatgagtgta 9913203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 28318415 - 28318348
Alignment:
Q  82 ttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  28318415 ttcatttataaaattaagaagcaggagtaccgatacacctcattttataagtgtaccgtagaagttcc 28318348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 14434892 - 14434818
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||  |||||||||||    
T  14434892 tgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtgagtgtacagtagaagttccc 14434818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 40563189 - 40563116
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  40563189 tgatcgttaatttataaaattatgaagcaagagtatcggtacacctcattttatgagtgtaccgtagaagttcc 40563116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 9910113 - 9910042
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||||||| ||| |||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  9910113 tgatcgttcatttatagaattaaaaagaaggagtatcggtacacctcattttgtgagtgtaccatagaagtt 9910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 6260363 - 6260425
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  6260363 ataaaattatgaaggaagagtaccggtacacctcattttatgagtgtaccgtagaagttccct 6260425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 29960200 - 29960274
Alignment:
Q  77 gatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||||| ||| ||||||||| |||| | ||||||||||||||||||||||||||||||||| || |||||||||    
T  29960200 gatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttatgagtgtaccgtaaaagttccct 29960274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 35370472 - 35370410
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  35370472 tgatcgttcatttataaaattaagaagcaagagtaccggtacacctcattttgtgagtttacc 35370410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 39816579 - 39816506
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||| ||| ||||||||| |||||| |||||||||||||||||| ||| |||||||||| ||||||||||    
T  39816579 tgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttcc 39816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 702295 - 702355
Alignment:
Q  89 ataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    ||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  702295 ataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcc 702355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 42597545 - 42597474
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||| ||||||||||||||||| |||| | |||||||||||||| |||||||||| |||||||||||    
T  42597545 atcgttcatttataaaattaagaagcag-agtatcagtacacctcattttgtgagtgtaccgtagaagttccc 42597474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 13119131 - 13119202
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||| ||| | |||||||| ||||||||    
T  13119131 tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtaagtgtaccgtagaagtt 13119202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 13127315 - 13127387
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| |||| | |||||||||||||||||||||| ||| |||||| |||||||||||    
T  13127315 atcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgaatgtaccgtagaagttccc 13127387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 5360060 - 5360119
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtac 137  Q
    |||||| ||| ||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  5360060 atcgttaatttataaaattatgaagcaggagtaccgatacacctcattttgtgagtgtac 5360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 36427979 - 36427904
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||| |||||||||   |||| |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  36427979 tgatcgttaatttataaaattattgagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccct 36427904  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 33210704 - 33210773
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||| ||| ||||||||| |||| | | |||||||||||||||||||| |||||||||| ||||||||    
T  33210704 atcgttaatttataaaattatgaagaaagggtaccggtacacctcattttgtgagtgtaccgtagaagtt 33210773  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 3426124 - 3426183
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtac 137  Q
    |||||| ||| ||||||||| |||||| ||||| |||||||||||||||| |||||||||    
T  3426124 atcgttaatttataaaattatgaagcaagagtatcggtacacctcattttgtgagtgtac 3426183  T

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Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 17069340 - 17069391
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||||||| |||| ||||| ||| |||||||||||    
T  17069340 gaagcaggagtaccggtacacctcaatttacgagtgcaccgtagaagttccc 17069391  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 34259872 - 34259943
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagtt 147  Q
    |||||||| ||| ||||||||| |||||||||||||||||| |||||| ||| | ||| |||| ||||||||    
T  34259872 tgatcgttaatttataaaattatgaagcaggagtaccggtagacctcactttgttagtataccgtagaagtt 34259943  T

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Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 42486679 - 42486604
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    ||||| || ||| ||||||||| |||| | |||||||||||||||||| ||| |||||||||| ||||| ||||||    
T  42486679 tgatctttaatttataaaattatgaagtatgagtaccggtacacctcactttgtgagtgtaccgtagaaattccct 42486604  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 30753521 - 30753459
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||| ||| |||||||||  ||| | |||||||||||||||||||||| ||||||||||    
T  30753521 tgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtacc 30753459  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 32455656 - 32455701
Alignment:
Q  106 gagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||    
T  32455656 gagtaccgatacaccttaatttatgagtgtaccatagaagttccct 32455701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 39939085 - 39939032
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||    
T  39939085 gaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 39939032  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 8258727 - 8258781
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagta-ccggtacacctcattttat 129  Q
    |||||||||||| ||||||||||||||||| |||| ||| ||||| |||||||||    
T  8258727 tgatcgttcatttataaaattaagaagcagaagtacccgatacacatcattttat 8258781  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 16432709 - 16432649
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatg-agtgtaccatagaagttccctgtaaaataa 160  Q
    |||||||||| ||||||||||||| |||||| |||||||| || ||||||||| ||||||||    
T  16432709 aagcaggagttccggtacacctcaatttatgaagtgtaccgtaaaagttccct-taaaataa 16432649  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 40756593 - 40756540
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||    
T  40756593 gaagcaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccct 40756540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 3024223 - 3024163
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtacc 138  Q
    |||||||||| |||||||||||||| || |||| || ||||| | |||||| |||||||||    
T  3024223 atcgttcatttataaaattaagaagtagaagtatcgatacactttattttacgagtgtacc 3024163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 5204668 - 5204616
Alignment:
Q  100 aagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    |||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||    
T  5204668 aagcaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccct 5204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 39979675 - 39979751
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccct 151  Q
    ||||| || ||| ||||| ||| ||||||| |||| |||||||||||| ||| ||| ||||||| ||||||||||||    
T  39979675 tgatcattaatttataaatttatgaagcagaagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccct 39979751  T

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Target: scaffold1319 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 117 - 43
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||| |||||||||||    
T  117 tgatcgttcatttataaaattaagaagcaggagtaccaatacacctcattttgtgagtgtaccgtagaagttccc 43  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 19 - 91
Alignment:
Q  78 atcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  19 atcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 91  T

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Target: scaffold0667 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 165 - 239
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||||||| ||||||| ||||||||||||||||| ||| |||||||||| |||||||||||    
T  165 tgatcgttaatttataaaattatgaagcagaagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 7536 - 7609
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttcc 149  Q
    |||||||||||| |||||||||||||| | |||||||| ||||| ||||||| | |||||| | ||||||||||    
T  7536 tgatcgttcatttataaaattaagaaggaagagtaccgatacacttcattttgttagtgtatcgtagaagttcc 7609  T

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Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 3102 - 3031
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatgagtgtaccatagaagttccct 151  Q
    |||||||||||| ||||||||| |||| |||||||||||   |||||| |||||||||||||| ||||| ||||||    
T  3102 tgatcgttcatt-ataaaattatgaagtaggagtaccgg---acctcactttatgagtgtaccgtagaaattccct 3031  T

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Target: scaffold0271 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 16992 - 17067
Alignment:
Q  76 tgatcgttcattcataaaattaagaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    |||||||| ||| ||||| ||| |||| ||||||| |||||||||||| ||| ||| ||||||| |||||||||||    
T  16992 tgatcgttaattgataaatttatgaagtaggagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 17067  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 214494 - 214546
Alignment:
Q  99 gaagcaggagtaccggtacacctcattttatga-gtgtaccatagaagttccc 150  Q
    ||||||||||||||||||||  ||| ||||||| ||||||| |||||||||||    
T  214494 gaagcaggagtaccggtacaattcaatttatgaggtgtaccgtagaagttccc 214546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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