View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2095_low_10 (Length: 240)
Name: NF2095_low_10
Description: NF2095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2095_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 36946183 - 36946384
Alignment:
| Q |
19 |
atgtgtatatgcttaaatgatccgtccaaatcaatgtaaccatacaagcatggctcacatgcctaagacatgtctagaagatgataaaaccaggttaatc |
118 |
Q |
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| T |
36946183 |
atgtgtatatgcttaaatgatccgtccaaatcaatgtaaccatacaagcatggctcacatgcttaagacatgtctagaagatgataaaaccaggttaatc |
36946282 |
T |
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| Q |
119 |
caccaaaactaataagacaaagatacaaagaaaacacnnnnnnnncaaatccaccccaaatcaatgtagactaataacagttcacaaaaccaaacaagcc |
218 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36946283 |
caccaaaactaataagacaaagatacaaagaaaacacaaaaaaaacaaatccaccccaaatcaatgtagactaataacagttcacaaaaccaaacaagcc |
36946382 |
T |
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| Q |
219 |
aa |
220 |
Q |
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|| |
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| T |
36946383 |
aa |
36946384 |
T |
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