View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2095_low_5 (Length: 349)
Name: NF2095_low_5
Description: NF2095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2095_low_5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 11 - 349
Target Start/End: Complemental strand, 43083540 - 43083203
Alignment:
| Q |
11 |
cacagattggaccccataattgtatagattctttgaaatcgtagaaaaaacatgaaagatgataagaagtgtcctaagaacactagttacnnnnnnnnnn |
110 |
Q |
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| T |
43083540 |
cacaaattggaccccacaattgtatagattctttgaaatcctagaaaaaatatgaatgatgataagaagtgtgctaagaacactagttacaaaaaaccaa |
43083441 |
T |
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| Q |
111 |
nnntatatagtatatatactaagttttattatcaattaacgtgactaatctctatnnnnnnnnnccgttacacacaagatgagtttttccttctctgaat |
210 |
Q |
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| T |
43083440 |
aaatatatagtatatatactaagttttattatcaattaacgtgactaatctctataaaaaaac-ctgttacacacaagatgagtttttccttctctgaat |
43083342 |
T |
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| Q |
211 |
tttctcaattcaaaagagcaagagatcgagctcttaaccatttcctgaagtgacaccttctctgaatacactatttttatacacatcacatccatatttt |
310 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43083341 |
tttctcaattcaaaagagcaagagattgagctcttaaccatttcctgaagtgacaccttctctgaatacactatttttatacacatcacatccatatttt |
43083242 |
T |
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| Q |
311 |
attaatgaatatcctaaagatattattagcagtttcctt |
349 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43083241 |
attaatgaatatcctaaagatattattagcagtttcctt |
43083203 |
T |
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