View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2095_low_9 (Length: 240)
Name: NF2095_low_9
Description: NF2095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2095_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 43015202 - 43014997
Alignment:
| Q |
21 |
attcgtcttctcgggttttcgattctttccaaagttggtgtagagaacaagaattttcttgcaacctttttgtttaccattaaccataacaggtctggtc |
120 |
Q |
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| T |
43015202 |
attcgtcttctcgggttttcgattctttccgaagttggtgtagagaacaagaattttcttgcaacctttttgtttaccattaaccataacaggtctggtc |
43015103 |
T |
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| Q |
121 |
ttaccagttttgtgccatcttgtttctcctcctgtacttccttgtaagtcacactcttcggtttgaatctttctcctctttcgtgttcctgttgtatatg |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43015102 |
ttaccagttttgtgccatcttgtttctcctcctgtacttccttgtaagtcacactcttcggtttgaatctttctcctctttcgtgttcctgttgtatatg |
43015003 |
T |
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| Q |
221 |
cctttg |
226 |
Q |
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|||||| |
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| T |
43015002 |
cctttg |
43014997 |
T |
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