View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20960_high_7 (Length: 212)
Name: NF20960_high_7
Description: NF20960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20960_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 33571607 - 33571759
Alignment:
| Q |
44 |
taatttcttctcctcctcccactcatcgacctaacaacaccaaca------tccccacaatctctttccggcgcaactctccggcaaggcttcccattcc |
137 |
Q |
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| T |
33571607 |
taatttctcctcctcctcccactcaccgacctaacaacaccaacaccaacatccccacaatcactttccggcgcaactctccggcaaggcttcc------ |
33571700 |
T |
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| Q |
138 |
catcaccagaaaacatcacaatctgtttcctaccaaccccacatttctcaccacttttc |
196 |
Q |
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| T |
33571701 |
catcaccagaaaacatcacaatctgtttcctaccaaccccacatttctcaccacttttc |
33571759 |
T |
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