View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20960_low_1 (Length: 531)

Name: NF20960_low_1
Description: NF20960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20960_low_1
NF20960_low_1
[»] chr3 (118 HSPs)
chr3 (1-524)||(7853913-7854433)
chr3 (13-493)||(45581591-45582070)
chr3 (98-524)||(54685202-54685625)
chr3 (1-481)||(54037925-54038406)
chr3 (97-524)||(33341812-33342236)
chr3 (1-374)||(3992628-3993001)
chr3 (1-374)||(2844269-2844642)
chr3 (1-489)||(17955781-17956274)
chr3 (97-502)||(30152893-30153297)
chr3 (1-316)||(55513006-55513321)
chr3 (97-374)||(53771119-53771397)
chr3 (97-374)||(23492451-23492728)
chr3 (97-374)||(16261531-16261809)
chr3 (13-352)||(28558271-28558610)
chr3 (97-374)||(38167992-38168269)
chr3 (97-339)||(18970034-18970277)
chr3 (64-336)||(15550714-15550986)
chr3 (409-524)||(19946629-19946744)
chr3 (174-339)||(48421690-48421855)
chr3 (13-129)||(19232089-19232205)
chr3 (1-129)||(15857067-15857195)
chr3 (418-524)||(47784957-47785064)
chr3 (7-129)||(16743951-16744073)
chr3 (443-524)||(9303343-9303425)
chr3 (409-477)||(14295415-14295484)
chr3 (409-477)||(14298399-14298467)
chr3 (409-477)||(14304026-14304094)
chr3 (318-374)||(16996172-16996228)
chr3 (409-493)||(17523091-17523176)
chr3 (318-374)||(317621-317677)
chr3 (409-488)||(17139474-17139554)
chr3 (409-477)||(35123674-35123742)
chr3 (318-374)||(50112164-50112220)
chr3 (292-374)||(22144358-22144441)
chr3 (398-472)||(28558188-28558263)
chr3 (292-372)||(6146832-6146913)
chr3 (294-374)||(6154419-6154500)
chr3 (409-481)||(11329162-11329235)
chr3 (409-481)||(14528213-14528286)
chr3 (318-477)||(19570801-19570957)
chr3 (313-374)||(34439451-34439512)
chr3 (318-374)||(12349843-12349899)
chr3 (318-374)||(13817590-13817646)
chr3 (409-472)||(14059414-14059478)
chr3 (409-471)||(16182146-16182209)
chr3 (292-374)||(53898541-53898624)
chr3 (413-472)||(53898660-53898719)
chr3 (206-292)||(14177019-14177105)
chr3 (415-496)||(17960520-17960602)
chr3 (189-339)||(19946812-19946962)
chr3 (409-477)||(13817492-13817561)
chr3 (409-477)||(22144473-22144542)
chr3 (409-481)||(55441050-55441123)
chr3 (318-374)||(12349652-12349708)
chr3 (318-374)||(17100731-17100787)
chr3 (318-374)||(17101416-17101472)
chr3 (409-496)||(38811209-38811297)
chr3 (318-374)||(54424090-54424146)
chr3 (455-497)||(1990759-1990801)
chr3 (189-339)||(14285075-14285225)
chr3 (206-339)||(8275853-8275986)
chr3 (206-339)||(9303108-9303241)
chr3 (409-477)||(14301042-14301111)
chr3 (409-469)||(16996260-16996321)
chr3 (409-465)||(50112252-50112309)
chr3 (318-374)||(14298499-14298555)
chr3 (318-374)||(14304126-14304182)
chr3 (318-374)||(19260952-19261008)
chr3 (318-374)||(35123774-35123830)
chr3 (411-481)||(12560439-12560510)
chr3 (413-502)||(12952915-12953006)
chr3 (292-374)||(16182032-16182114)
chr3 (240-339)||(16934016-16934115)
chr3 (413-487)||(17204667-17204742)
chr3 (318-373)||(17523002-17523057)
chr3 (411-481)||(23492346-23492417)
chr3 (206-292)||(12539070-12539156)
chr3 (411-472)||(38167896-38167958)
chr3 (2-131)||(38810814-38810943)
chr3 (411-481)||(54423986-54424056)
chr3 (411-481)||(3992522-3992594)
chr3 (206-339)||(8268753-8268886)
chr3 (411-471)||(17100636-17100697)
chr3 (411-471)||(17101321-17101382)
chr3 (413-472)||(3576643-3576703)
chr3 (409-449)||(12349931-12349970)
chr3 (176-296)||(17393590-17393710)
chr3 (409-444)||(8631801-8631836)
chr3 (59-134)||(13301326-13301401)
chr3 (59-134)||(13311982-13312057)
chr3 (206-273)||(37915294-37915361)
chr3 (416-472)||(53771022-53771080)
chr3 (144-290)||(11402752-11402898)
chr3 (409-497)||(12488927-12489017)
chr3 (59-113)||(17205019-17205073)
chr3 (409-477)||(317709-317778)
chr3 (409-477)||(6146947-6147015)
chr3 (409-477)||(6154532-6154600)
chr3 (96-129)||(15615137-15615170)
chr3 (413-487)||(17191511-17191583)
chr3 (416-472)||(19261047-19261104)
chr3 (455-496)||(34559857-34559898)
chr3 (298-339)||(39656453-39656494)
chr3 (97-134)||(51961031-51961068)
chr3 (97-129)||(2050115-2050147)
chr3 (97-129)||(2449152-2449184)
chr3 (411-472)||(2844172-2844235)
chr3 (97-129)||(8268650-8268682)
chr3 (97-129)||(8275750-8275782)
chr3 (413-488)||(9590959-9591035)
chr3 (59-111)||(12031849-12031901)
chr3 (97-129)||(14842487-14842519)
chr3 (411-447)||(16880131-16880167)
chr3 (97-129)||(16933869-16933901)
chr3 (97-129)||(17912398-17912430)
chr3 (97-129)||(18911300-18911332)
chr3 (97-129)||(19260749-19260781)
chr3 (292-340)||(38527841-38527889)
[»] chr6 (61 HSPs)
chr6 (1-489)||(35014961-35015447)
chr6 (1-489)||(19983096-19983581)
chr6 (1-374)||(18583395-18583768)
chr6 (97-374)||(23995001-23995279)
chr6 (97-374)||(26089813-26090091)
chr6 (97-374)||(18002395-18002673)
chr6 (97-374)||(15742120-15742397)
chr6 (98-339)||(4991186-4991427)
chr6 (93-362)||(15889601-15889871)
chr6 (93-362)||(22585441-22585711)
chr6 (93-362)||(22590272-22590542)
chr6 (409-524)||(18583264-18583379)
chr6 (121-363)||(15004831-15005072)
chr6 (97-336)||(25640456-25640694)
chr6 (409-524)||(18823597-18823712)
chr6 (409-524)||(18839452-18839567)
chr6 (442-524)||(4991002-4991085)
chr6 (190-336)||(32276756-32276902)
chr6 (413-524)||(17083383-17083496)
chr6 (409-477)||(31628245-31628314)
chr6 (409-502)||(18398890-18398984)
chr6 (318-370)||(13014822-13014874)
chr6 (318-374)||(32898868-32898924)
chr6 (323-374)||(25744331-25744382)
chr6 (206-336)||(19629447-19629577)
chr6 (413-489)||(18381888-18381965)
chr6 (409-465)||(32898779-32898836)
chr6 (318-374)||(18570357-18570413)
chr6 (318-374)||(22441012-22441068)
chr6 (412-471)||(16086001-16086060)
chr6 (414-472)||(25367443-25367502)
chr6 (411-481)||(18002707-18002777)
chr6 (318-379)||(18777219-18777280)
chr6 (409-477)||(25744414-25744483)
chr6 (411-472)||(26089718-26089779)
chr6 (209-334)||(26512260-26512385)
chr6 (209-334)||(26517376-26517501)
chr6 (318-374)||(18432721-18432777)
chr6 (413-496)||(22361970-22362054)
chr6 (318-374)||(31628346-31628402)
chr6 (409-471)||(18432626-18432689)
chr6 (411-481)||(18777119-18777190)
chr6 (409-477)||(22440911-22440980)
chr6 (415-472)||(15740211-15740269)
chr6 (416-481)||(15742439-15742505)
chr6 (409-481)||(28195295-28195367)
chr6 (318-374)||(16106594-16106650)
chr6 (227-339)||(16300010-16300122)
chr6 (227-339)||(18823417-18823529)
chr6 (255-339)||(18839300-18839384)
chr6 (227-323)||(21931333-21931429)
chr6 (413-496)||(25919571-25919655)
chr6 (7-113)||(21623506-21623611)
chr6 (416-472)||(23994904-23994962)
chr6 (206-296)||(17374928-17375018)
chr6 (96-129)||(1650020-1650053)
chr6 (318-374)||(16086095-16086151)
chr6 (97-129)||(16232199-16232231)
chr6 (97-129)||(19610325-19610357)
chr6 (413-472)||(33324675-33324735)
chr6 (413-472)||(35136217-35136277)
[»] chr7 (76 HSPs)
chr7 (1-481)||(111073-111550)
chr7 (1-502)||(126366-126866)
chr7 (1-493)||(32493847-32494341)
chr7 (1-362)||(1936821-1937177)
chr7 (97-374)||(2028999-2029276)
chr7 (97-374)||(42056188-42056466)
chr7 (97-374)||(2190085-2190363)
chr7 (97-374)||(3049661-3049937)
chr7 (101-236)||(15516765-15516901)
chr7 (1-128)||(7283860-7283987)
chr7 (1-129)||(3060271-3060399)
chr7 (409-524)||(7284261-7284376)
chr7 (145-336)||(39291457-39291648)
chr7 (99-339)||(13352065-13352306)
chr7 (409-481)||(11287390-11287463)
chr7 (413-524)||(14272091-14272203)
chr7 (292-378)||(44865304-44865391)
chr7 (411-488)||(16570209-16570287)
chr7 (411-488)||(16595375-16595453)
chr7 (322-477)||(39046740-39046893)
chr7 (412-489)||(17224142-17224220)
chr7 (409-477)||(45452367-45452435)
chr7 (413-488)||(49047879-49047955)
chr7 (292-374)||(143717-143800)
chr7 (411-481)||(12248324-12248395)
chr7 (292-374)||(47289859-47289942)
chr7 (411-472)||(26070467-26070529)
chr7 (411-472)||(26094254-26094316)
chr7 (294-379)||(35094889-35094974)
chr7 (7-131)||(13377849-13377973)
chr7 (409-477)||(15822632-15822701)
chr7 (176-360)||(15977820-15978004)
chr7 (409-477)||(35094794-35094863)
chr7 (318-374)||(3895103-3895159)
chr7 (318-374)||(11287495-11287551)
chr7 (318-378)||(12369953-12370013)
chr7 (409-488)||(13274753-13274833)
chr7 (7-113)||(17223740-17223846)
chr7 (398-489)||(1937198-1937290)
chr7 (413-477)||(12758965-12759029)
chr7 (318-374)||(15822544-15822600)
chr7 (413-496)||(48356602-48356686)
chr7 (240-339)||(371203-371302)
chr7 (411-472)||(3049565-3049627)
chr7 (399-496)||(16915119-16915217)
chr7 (318-374)||(7284173-7284229)
chr7 (227-362)||(8563369-8563505)
chr7 (318-374)||(12759065-12759121)
chr7 (318-374)||(26070377-26070433)
chr7 (318-374)||(26094164-26094220)
chr7 (411-481)||(3894998-3895069)
chr7 (416-472)||(42056505-42056563)
chr7 (409-497)||(13377485-13377575)
chr7 (59-113)||(13389693-13389747)
chr7 (410-477)||(47289758-47289826)
chr7 (411-481)||(2028893-2028965)
chr7 (418-497)||(4446168-4446249)
chr7 (418-493)||(12370050-12370127)
chr7 (418-497)||(14935319-14935400)
chr7 (418-497)||(15362912-15362993)
chr7 (97-134)||(25124445-25124482)
chr7 (412-477)||(143622-143688)
chr7 (411-472)||(2190397-2190460)
chr7 (97-129)||(7293333-7293365)
chr7 (97-129)||(11516544-11516576)
chr7 (97-129)||(13758677-13758709)
chr7 (97-129)||(14113903-14113935)
chr7 (97-129)||(15441478-15441510)
chr7 (97-129)||(15862226-15862258)
chr7 (97-129)||(15927875-15927907)
chr7 (97-129)||(16212071-16212103)
chr7 (97-129)||(18979938-18979970)
chr7 (97-129)||(30262043-30262075)
chr7 (413-496)||(34241393-34241477)
chr7 (97-129)||(36052971-36053003)
chr7 (412-477)||(44865204-44865270)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-472)||(79846-80315)
scaffold0034 (318-379)||(46238-46299)
[»] chr4 (73 HSPs)
chr4 (1-376)||(5682332-5682706)
chr4 (12-489)||(25119022-25119498)
chr4 (97-502)||(14951713-14952117)
chr4 (97-374)||(15272211-15272489)
chr4 (93-328)||(19559483-19559719)
chr4 (7-129)||(54118078-54118200)
chr4 (97-199)||(15135907-15136010)
chr4 (174-339)||(34177617-34177781)
chr4 (422-524)||(16522748-16522851)
chr4 (145-339)||(49071800-49071994)
chr4 (318-374)||(53704846-53704902)
chr4 (422-524)||(9295624-9295727)
chr4 (189-339)||(14500208-14500358)
chr4 (409-477)||(16732146-16732215)
chr4 (409-489)||(34395222-34395303)
chr4 (292-374)||(34395335-34395418)
chr4 (409-502)||(55376798-55376893)
chr4 (409-477)||(44055892-44055961)
chr4 (318-374)||(820029-820085)
chr4 (318-374)||(8872584-8872640)
chr4 (409-481)||(18494529-18494602)
chr4 (409-477)||(23270135-23270204)
chr4 (409-472)||(13809711-13809775)
chr4 (318-374)||(30457981-30458037)
chr4 (413-496)||(37957230-37957314)
chr4 (318-378)||(44055989-44056049)
chr4 (318-374)||(44346905-44346961)
chr4 (318-374)||(53907812-53907868)
chr4 (401-489)||(5682728-5682817)
chr4 (409-477)||(53704934-53705003)
chr4 (409-477)||(53907897-53907966)
chr4 (318-378)||(16732243-16732303)
chr4 (318-374)||(21959576-21959632)
chr4 (322-374)||(55376714-55376766)
chr4 (413-524)||(7186049-7186159)
chr4 (292-374)||(23270020-23270103)
chr4 (409-465)||(44346816-44346873)
chr4 (413-496)||(7964916-7965000)
chr4 (227-339)||(14996241-14996353)
chr4 (227-339)||(16522932-16523044)
chr4 (413-496)||(19821981-19822065)
chr4 (411-472)||(12837403-12837464)
chr4 (218-288)||(21417471-21417541)
chr4 (409-462)||(21959664-21959718)
chr4 (409-471)||(820114-820177)
chr4 (413-489)||(14901197-14901274)
chr4 (318-379)||(30232609-30232670)
chr4 (189-310)||(32460699-32460820)
chr4 (413-489)||(47535251-47535328)
chr4 (227-339)||(8045058-8045170)
chr4 (227-339)||(9295808-9295920)
chr4 (409-488)||(27960938-27961017)
chr4 (59-131)||(41165811-41165883)
chr4 (409-449)||(45459056-45459096)
chr4 (219-282)||(12133623-12133686)
chr4 (416-472)||(15272528-15272586)
chr4 (245-336)||(16225211-16225301)
chr4 (318-373)||(45458968-45459023)
chr4 (318-372)||(12837313-12837367)
chr4 (411-472)||(30232699-30232761)
chr4 (420-489)||(41166158-41166228)
chr4 (206-339)||(9795330-9795463)
chr4 (96-129)||(14996445-14996478)
chr4 (399-477)||(30457880-30457959)
chr4 (97-129)||(7131982-7132014)
chr4 (97-129)||(13246737-13246769)
chr4 (97-129)||(15287162-15287194)
chr4 (97-129)||(15294271-15294303)
chr4 (97-129)||(16327840-16327872)
chr4 (97-129)||(16609013-16609045)
chr4 (97-129)||(17145574-17145606)
chr4 (97-129)||(20001030-20001062)
chr4 (97-129)||(26680517-26680549)
[»] scaffold0184 (1 HSPs)
scaffold0184 (12-489)||(31095-31570)
[»] scaffold0078 (2 HSPs)
scaffold0078 (12-489)||(41274-41749)
scaffold0078 (97-129)||(36980-37012)
[»] chr1 (39 HSPs)
chr1 (1-379)||(21860084-21860462)
chr1 (1-379)||(44034775-44035153)
chr1 (98-502)||(15861327-15861728)
chr1 (174-502)||(22366970-22367296)
chr1 (1-183)||(41218674-41218856)
chr1 (7-129)||(41394527-41394649)
chr1 (413-496)||(27674755-27674838)
chr1 (292-377)||(22403196-22403282)
chr1 (409-477)||(21718206-21718274)
chr1 (409-477)||(35522520-35522588)
chr1 (409-488)||(51627865-51627945)
chr1 (413-495)||(22829629-22829712)
chr1 (318-477)||(41212046-41212206)
chr1 (413-496)||(19603055-19603139)
chr1 (416-496)||(38033882-38033962)
chr1 (409-477)||(49967628-49967696)
chr1 (318-374)||(49967728-49967784)
chr1 (398-481)||(21859984-21860068)
chr1 (318-374)||(35522432-35522488)
chr1 (409-489)||(20177140-20177221)
chr1 (318-374)||(21718306-21718362)
chr1 (240-339)||(21650082-21650181)
chr1 (398-484)||(44035169-44035255)
chr1 (409-472)||(22403311-22403375)
chr1 (227-336)||(20254430-20254539)
chr1 (318-379)||(27329868-27329929)
chr1 (318-379)||(35054829-35054890)
chr1 (409-449)||(9784301-9784341)
chr1 (413-496)||(20955644-20955728)
chr1 (59-127)||(27675120-27675188)
chr1 (411-493)||(35054716-35054800)
chr1 (7-113)||(20177513-20177619)
chr1 (409-489)||(13377041-13377122)
chr1 (96-129)||(45051726-45051759)
chr1 (413-496)||(17608886-17608970)
chr1 (413-488)||(21194980-21195056)
chr1 (97-129)||(37844374-37844406)
chr1 (418-489)||(41229149-41229221)
chr1 (97-129)||(46523695-46523727)
[»] chr8 (76 HSPs)
chr8 (1-489)||(24716666-24717152)
chr8 (15-379)||(39115348-39115712)
chr8 (1-374)||(274521-274894)
chr8 (1-374)||(640955-641328)
chr8 (1-374)||(826761-827134)
chr8 (97-481)||(41506709-41507091)
chr8 (97-359)||(24385652-24385914)
chr8 (188-338)||(22321437-22321587)
chr8 (240-374)||(16038924-16039058)
chr8 (97-336)||(21259391-21259630)
chr8 (93-339)||(17502274-17502521)
chr8 (1-129)||(16404804-16404932)
chr8 (121-339)||(23217990-23218208)
chr8 (145-339)||(4233968-4234162)
chr8 (292-374)||(22234890-22234972)
chr8 (409-477)||(20567200-20567268)
chr8 (409-477)||(20567359-20567427)
chr8 (409-477)||(20573393-20573461)
chr8 (409-477)||(20573552-20573620)
chr8 (409-496)||(38533607-38533695)
chr8 (416-496)||(22736046-22736127)
chr8 (409-477)||(41246635-41246704)
chr8 (292-363)||(19993141-19993212)
chr8 (318-374)||(41246736-41246792)
chr8 (292-374)||(37611746-37611829)
chr8 (398-502)||(29759893-29759999)
chr8 (409-477)||(19993255-19993324)
chr8 (7-131)||(31194128-31194251)
chr8 (413-477)||(15969796-15969860)
chr8 (189-329)||(21494452-21494592)
chr8 (409-472)||(21680984-21681048)
chr8 (409-488)||(39446967-39447046)
chr8 (409-493)||(20481565-20481651)
chr8 (206-336)||(22147555-22147685)
chr8 (189-339)||(22886440-22886590)
chr8 (175-292)||(18118259-18118376)
chr8 (413-489)||(23837163-23837240)
chr8 (413-496)||(5854572-5854656)
chr8 (318-374)||(20481683-20481739)
chr8 (314-374)||(20561740-20561800)
chr8 (318-374)||(20573305-20573361)
chr8 (314-374)||(20647938-20647998)
chr8 (318-374)||(20654018-20654074)
chr8 (418-489)||(21198362-21198434)
chr8 (409-477)||(25122513-25122582)
chr8 (240-338)||(2545061-2545159)
chr8 (206-336)||(18612523-18612653)
chr8 (408-497)||(33528383-33528473)
chr8 (227-336)||(18619428-18619537)
chr8 (409-465)||(20648030-20648087)
chr8 (409-465)||(20654106-20654163)
chr8 (7-131)||(21197957-21198080)
chr8 (398-462)||(39115267-39115332)
chr8 (413-496)||(26011452-26011536)
chr8 (411-481)||(274416-274487)
chr8 (411-481)||(641362-641433)
chr8 (411-481)||(827168-827239)
chr8 (240-339)||(3431323-3431422)
chr8 (1-40)||(29760363-29760402)
chr8 (227-336)||(16002113-16002223)
chr8 (420-489)||(24929018-24929087)
chr8 (399-449)||(37611675-37611724)
chr8 (455-496)||(15933256-15933297)
chr8 (413-489)||(17285232-17285309)
chr8 (413-489)||(31194529-31194606)
chr8 (97-129)||(5238404-5238436)
chr8 (97-129)||(13662182-13662214)
chr8 (97-129)||(13720845-13720877)
chr8 (411-493)||(16039092-16039176)
chr8 (97-129)||(16872968-16873000)
chr8 (409-472)||(22235004-22235068)
chr8 (97-129)||(22907128-22907160)
chr8 (413-497)||(23149736-23149823)
chr8 (97-129)||(24661162-24661194)
chr8 (97-129)||(43373392-43373424)
chr8 (97-129)||(43685863-43685895)
[»] scaffold0016 (7 HSPs)
scaffold0016 (1-379)||(166068-166446)
scaffold0016 (59-489)||(162040-162469)
scaffold0016 (318-374)||(164293-164349)
scaffold0016 (409-489)||(166466-166547)
scaffold0016 (59-131)||(116413-116485)
scaffold0016 (413-489)||(116718-116795)
scaffold0016 (409-465)||(164204-164261)
[»] chr2 (63 HSPs)
chr2 (1-379)||(22274795-22275176)
chr2 (1-374)||(22284033-22284409)
chr2 (97-374)||(9652796-9653073)
chr2 (97-374)||(21273949-21274226)
chr2 (45-339)||(15633327-15633621)
chr2 (98-339)||(25213162-25213403)
chr2 (1-129)||(19794533-19794661)
chr2 (13-129)||(43642797-43642913)
chr2 (97-336)||(7321633-7321872)
chr2 (27-129)||(20627168-20627270)
chr2 (413-524)||(19433537-19433649)
chr2 (292-374)||(23836791-23836874)
chr2 (442-524)||(24826961-24827044)
chr2 (422-524)||(25212977-25213081)
chr2 (409-496)||(3442-3529)
chr2 (292-374)||(25876006-25876088)
chr2 (318-477)||(32465835-32465992)
chr2 (409-477)||(27261783-27261852)
chr2 (409-477)||(28974026-28974095)
chr2 (409-477)||(4448334-4448402)
chr2 (409-488)||(22580060-22580140)
chr2 (412-489)||(25601989-25602067)
chr2 (409-477)||(271148-271216)
chr2 (292-374)||(6879515-6879597)
chr2 (189-339)||(28031230-28031380)
chr2 (189-362)||(33128135-33128308)
chr2 (462-524)||(43645824-43645886)
chr2 (175-292)||(20279571-20279688)
chr2 (409-489)||(22283921-22284001)
chr2 (409-477)||(23836906-23836975)
chr2 (413-496)||(722353-722437)
chr2 (398-489)||(22274688-22274779)
chr2 (411-493)||(36890888-36890972)
chr2 (318-374)||(271248-271304)
chr2 (409-488)||(24571493-24571572)
chr2 (227-339)||(24826748-24826860)
chr2 (409-493)||(25876120-25876206)
chr2 (411-481)||(9653107-9653179)
chr2 (456-497)||(24884643-24884684)
chr2 (255-339)||(17204445-17204529)
chr2 (318-374)||(25602102-25602158)
chr2 (318-374)||(36890798-36890854)
chr2 (413-483)||(25305416-25305487)
chr2 (7-113)||(25305769-25305875)
chr2 (59-113)||(43646232-43646286)
chr2 (93-134)||(19666843-19666884)
chr2 (96-129)||(19689314-19689347)
chr2 (97-129)||(463043-463075)
chr2 (97-129)||(3798520-3798552)
chr2 (318-374)||(4448246-4448302)
chr2 (97-129)||(8944153-8944185)
chr2 (97-129)||(12635785-12635817)
chr2 (97-129)||(12641559-12641591)
chr2 (97-129)||(12728699-12728731)
chr2 (97-129)||(14906354-14906386)
chr2 (97-129)||(16935900-16935932)
chr2 (97-129)||(17006560-17006592)
chr2 (12-108)||(19660221-19660316)
chr2 (97-129)||(22863235-22863267)
chr2 (97-129)||(23820388-23820420)
chr2 (318-378)||(28974123-28974183)
chr2 (97-129)||(36982364-36982396)
chr2 (97-129)||(42177886-42177918)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-489)||(30056-30545)
[»] scaffold0686 (2 HSPs)
scaffold0686 (39-489)||(5925-6373)
scaffold0686 (1-243)||(5681-5923)
[»] chr5 (55 HSPs)
chr5 (97-481)||(2031783-2032165)
chr5 (98-502)||(11342635-11343039)
chr5 (110-374)||(21205004-21205268)
chr5 (97-374)||(21650773-21651050)
chr5 (97-339)||(16105757-16105999)
chr5 (398-523)||(11583982-11584108)
chr5 (7-128)||(11584374-11584495)
chr5 (175-327)||(22662653-22662805)
chr5 (101-339)||(25004929-25005165)
chr5 (442-524)||(16105573-16105656)
chr5 (442-524)||(109075-109158)
chr5 (409-502)||(1168405-1168500)
chr5 (409-477)||(11337387-11337455)
chr5 (292-374)||(21397170-21397253)
chr5 (318-374)||(4865341-4865397)
chr5 (409-488)||(19405503-19405583)
chr5 (292-374)||(21646826-21646908)
chr5 (318-374)||(1168317-1168373)
chr5 (292-374)||(24475658-24475738)
chr5 (318-374)||(28261599-28261655)
chr5 (189-339)||(7529014-7529164)
chr5 (409-470)||(21397073-21397135)
chr5 (409-477)||(24475560-24475629)
chr5 (413-488)||(16595474-16595550)
chr5 (318-374)||(20712154-20712210)
chr5 (410-477)||(28261498-28261566)
chr5 (413-496)||(32966352-32966436)
chr5 (206-336)||(17909622-17909752)
chr5 (409-493)||(20712036-20712122)
chr5 (7-131)||(5450646-5450770)
chr5 (409-446)||(21906729-21906766)
chr5 (409-477)||(23466434-23466503)
chr5 (409-496)||(7728378-7728466)
chr5 (318-374)||(24183245-24183301)
chr5 (409-449)||(24183330-24183370)
chr5 (240-339)||(9730425-9730524)
chr5 (418-496)||(21616974-21617053)
chr5 (409-477)||(4865239-4865309)
chr5 (318-379)||(11584124-11584188)
chr5 (485-523)||(24225596-24225634)
chr5 (409-477)||(21646940-21647009)
chr5 (318-374)||(11337299-11337355)
chr5 (416-481)||(21204898-21204965)
chr5 (318-374)||(21906795-21906851)
chr5 (409-497)||(23493875-23493965)
chr5 (227-339)||(108862-108974)
chr5 (97-129)||(7425631-7425663)
chr5 (413-480)||(19862183-19862251)
chr5 (97-129)||(20623286-20623318)
chr5 (97-129)||(21233442-21233474)
chr5 (97-129)||(23507270-23507302)
chr5 (97-129)||(25900320-25900352)
chr5 (413-488)||(29917931-29918007)
chr5 (97-129)||(35791015-35791047)
chr5 (97-129)||(37053061-37053093)
[»] scaffold0342 (2 HSPs)
scaffold0342 (43-379)||(298-633)
scaffold0342 (401-484)||(652-736)
[»] scaffold0032 (5 HSPs)
scaffold0032 (97-374)||(55659-55936)
scaffold0032 (97-200)||(108075-108179)
scaffold0032 (409-496)||(93973-94061)
scaffold0032 (59-134)||(104480-104555)
scaffold0032 (411-481)||(55553-55625)
[»] scaffold0597 (2 HSPs)
scaffold0597 (97-374)||(878-1155)
scaffold0597 (416-481)||(1194-1261)
[»] scaffold0251 (4 HSPs)
scaffold0251 (97-374)||(13285-13563)
scaffold0251 (269-374)||(21432-21537)
scaffold0251 (411-481)||(13597-13669)
scaffold0251 (416-472)||(21576-21634)
[»] scaffold0039 (3 HSPs)
scaffold0039 (97-481)||(12418-12802)
scaffold0039 (398-481)||(19099-19183)
scaffold0039 (345-379)||(19049-19083)
[»] scaffold0706 (2 HSPs)
scaffold0706 (97-374)||(6443-6720)
scaffold0706 (411-472)||(6754-6816)
[»] scaffold0234 (2 HSPs)
scaffold0234 (97-374)||(17304-17581)
scaffold0234 (411-481)||(17615-17686)
[»] scaffold0004 (4 HSPs)
scaffold0004 (96-374)||(193396-193664)
scaffold0004 (231-374)||(186560-186702)
scaffold0004 (411-481)||(193698-193770)
scaffold0004 (411-472)||(186736-186799)
[»] scaffold0303 (2 HSPs)
scaffold0303 (97-343)||(4346-4593)
scaffold0303 (174-374)||(5-205)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-238)||(42568-42802)
[»] scaffold0175 (3 HSPs)
scaffold0175 (165-374)||(15027-15236)
scaffold0175 (411-481)||(14921-14993)
scaffold0175 (97-129)||(882-914)
[»] scaffold0465 (2 HSPs)
scaffold0465 (97-379)||(9882-10148)
scaffold0465 (411-481)||(10177-10248)
[»] scaffold0028 (4 HSPs)
scaffold0028 (98-339)||(130670-130911)
scaffold0028 (422-524)||(130486-130589)
scaffold0028 (314-373)||(89578-89637)
scaffold0028 (413-472)||(79521-79581)
[»] scaffold0833 (1 HSPs)
scaffold0833 (409-524)||(3230-3345)
[»] scaffold0063 (1 HSPs)
scaffold0063 (93-362)||(44009-44279)
[»] scaffold1295 (1 HSPs)
scaffold1295 (7-339)||(219-547)
[»] scaffold0507 (1 HSPs)
scaffold0507 (64-339)||(1371-1643)
[»] scaffold0574 (2 HSPs)
scaffold0574 (206-374)||(9516-9684)
scaffold0574 (411-481)||(9718-9789)
[»] scaffold1867 (2 HSPs)
scaffold1867 (409-524)||(75-190)
scaffold1867 (318-374)||(222-278)
[»] scaffold1164 (2 HSPs)
scaffold1164 (1-128)||(1701-1828)
scaffold1164 (409-502)||(1332-1427)
[»] scaffold0158 (4 HSPs)
scaffold0158 (409-524)||(24890-25004)
scaffold0158 (409-455)||(25212-25257)
scaffold0158 (318-370)||(25040-25092)
scaffold0158 (318-370)||(25293-25345)
[»] scaffold0120 (4 HSPs)
scaffold0120 (409-524)||(21442-21558)
scaffold0120 (409-524)||(31141-31257)
scaffold0120 (318-376)||(21588-21646)
scaffold0120 (318-371)||(31292-31345)
[»] scaffold0310 (4 HSPs)
scaffold0310 (409-524)||(315-430)
scaffold0310 (1-128)||(6208-6335)
scaffold0310 (448-524)||(6603-6679)
scaffold0310 (88-128)||(1-41)
[»] scaffold0122 (3 HSPs)
scaffold0122 (1-128)||(19754-19881)
scaffold0122 (1-128)||(24058-24185)
scaffold0122 (409-481)||(24398-24471)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-128)||(94-221)
[»] scaffold0077 (4 HSPs)
scaffold0077 (1-128)||(15271-15398)
scaffold0077 (318-374)||(15584-15640)
scaffold0077 (411-493)||(15677-15761)
scaffold0077 (96-129)||(36836-36869)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-128)||(20493-20620)
[»] scaffold0037 (3 HSPs)
scaffold0037 (206-374)||(95053-95225)
scaffold0037 (318-374)||(24841-24897)
scaffold0037 (411-481)||(94948-95019)
[»] scaffold0150 (2 HSPs)
scaffold0150 (418-524)||(28466-28573)
scaffold0150 (474-524)||(21637-21687)
[»] scaffold0079 (1 HSPs)
scaffold0079 (93-337)||(3732-3981)
[»] scaffold0057 (1 HSPs)
scaffold0057 (206-339)||(5996-6129)
[»] scaffold0091 (4 HSPs)
scaffold0091 (292-374)||(32281-32363)
scaffold0091 (292-374)||(41940-42022)
scaffold0091 (409-477)||(32180-32249)
scaffold0091 (409-477)||(42054-42123)
[»] scaffold0083 (3 HSPs)
scaffold0083 (292-374)||(14952-15034)
scaffold0083 (409-477)||(14194-14263)
scaffold0083 (409-477)||(14854-14923)
[»] scaffold0207 (1 HSPs)
scaffold0207 (189-339)||(17812-17962)
[»] scaffold0673 (3 HSPs)
scaffold0673 (292-477)||(6932-7118)
scaffold0673 (409-477)||(1023-1092)
scaffold0673 (318-374)||(935-991)
[»] scaffold0480 (3 HSPs)
scaffold0480 (409-481)||(9083-9156)
scaffold0480 (318-374)||(5359-5415)
scaffold0480 (409-477)||(5447-5516)
[»] scaffold0338 (2 HSPs)
scaffold0338 (409-481)||(8960-9033)
scaffold0338 (318-370)||(9069-9121)
[»] scaffold0035 (4 HSPs)
scaffold0035 (409-481)||(109663-109736)
scaffold0035 (409-481)||(118164-118237)
scaffold0035 (318-374)||(118076-118132)
scaffold0035 (325-374)||(109582-109631)
[»] scaffold0011 (4 HSPs)
scaffold0011 (292-374)||(254900-254983)
scaffold0011 (292-374)||(261506-261589)
scaffold0011 (409-477)||(255015-255084)
scaffold0011 (409-477)||(261621-261690)
[»] scaffold0610 (2 HSPs)
scaffold0610 (409-477)||(777-846)
scaffold0610 (318-374)||(689-745)
[»] scaffold0195 (2 HSPs)
scaffold0195 (409-477)||(719-788)
scaffold0195 (318-374)||(631-687)
[»] scaffold0031 (3 HSPs)
scaffold0031 (408-488)||(31010-31091)
scaffold0031 (318-374)||(70691-70748)
scaffold0031 (413-496)||(97403-97487)
[»] scaffold0022 (4 HSPs)
scaffold0022 (413-477)||(112747-112812)
scaffold0022 (409-496)||(103123-103211)
scaffold0022 (409-488)||(109556-109636)
scaffold0022 (318-374)||(112658-112714)
[»] scaffold0021 (4 HSPs)
scaffold0021 (409-481)||(11660-11733)
scaffold0021 (318-374)||(132363-132419)
scaffold0021 (409-477)||(132451-132520)
scaffold0021 (318-374)||(88353-88409)
[»] scaffold0190 (2 HSPs)
scaffold0190 (409-488)||(9903-9983)
scaffold0190 (318-374)||(10015-10071)
[»] scaffold0359 (3 HSPs)
scaffold0359 (409-471)||(1300-1363)
scaffold0359 (292-374)||(11740-11823)
scaffold0359 (318-374)||(1395-1451)
[»] scaffold0396 (2 HSPs)
scaffold0396 (409-470)||(11909-11970)
scaffold0396 (318-374)||(11821-11877)
[»] scaffold0014 (4 HSPs)
scaffold0014 (409-465)||(85321-85378)
scaffold0014 (409-481)||(159275-159348)
scaffold0014 (318-374)||(85410-85466)
scaffold0014 (314-374)||(159377-159438)
[»] scaffold0012 (3 HSPs)
scaffold0012 (409-489)||(253190-253271)
scaffold0012 (318-374)||(253102-253158)
scaffold0012 (97-129)||(247366-247398)
[»] scaffold0008 (3 HSPs)
scaffold0008 (409-477)||(22668-22737)
scaffold0008 (318-374)||(22769-22825)
scaffold0008 (97-129)||(128095-128127)
[»] scaffold0001 (7 HSPs)
scaffold0001 (409-477)||(70823-70892)
scaffold0001 (409-477)||(60784-60852)
scaffold0001 (318-374)||(70735-70791)
scaffold0001 (206-339)||(164974-165107)
scaffold0001 (325-374)||(60884-60933)
scaffold0001 (97-129)||(172210-172242)
scaffold0001 (97-129)||(177913-177945)
[»] scaffold0044 (2 HSPs)
scaffold0044 (318-374)||(38376-38432)
scaffold0044 (409-465)||(38287-38344)
[»] scaffold0025 (3 HSPs)
scaffold0025 (318-374)||(146679-146735)
scaffold0025 (416-493)||(146561-146640)
scaffold0025 (97-129)||(146906-146938)
[»] scaffold0740 (2 HSPs)
scaffold0740 (292-374)||(4363-4445)
scaffold0740 (409-477)||(4284-4353)
[»] scaffold0589 (1 HSPs)
scaffold0589 (411-481)||(7807-7878)
[»] scaffold0173 (1 HSPs)
scaffold0173 (189-336)||(5338-5485)
[»] scaffold0483 (1 HSPs)
scaffold0483 (408-493)||(6622-6708)
[»] scaffold0335 (2 HSPs)
scaffold0335 (197-339)||(5580-5722)
scaffold0335 (442-493)||(5823-5875)
[»] scaffold0023 (3 HSPs)
scaffold0023 (189-362)||(61218-61391)
scaffold0023 (97-129)||(48903-48935)
scaffold0023 (97-129)||(153924-153956)
[»] scaffold0160 (3 HSPs)
scaffold0160 (409-481)||(3492-3565)
scaffold0160 (409-472)||(3-67)
scaffold0160 (318-374)||(99-155)
[»] scaffold0053 (1 HSPs)
scaffold0053 (413-489)||(77052-77129)
[»] scaffold0554 (1 HSPs)
scaffold0554 (410-481)||(1889-1961)
[»] scaffold0240 (2 HSPs)
scaffold0240 (318-374)||(7647-7703)
scaffold0240 (409-470)||(7556-7615)
[»] scaffold0118 (1 HSPs)
scaffold0118 (227-339)||(34442-34554)
[»] scaffold0117 (2 HSPs)
scaffold0117 (409-477)||(11769-11837)
scaffold0117 (318-374)||(11681-11737)
[»] scaffold0095 (1 HSPs)
scaffold0095 (409-488)||(33929-34008)
[»] scaffold0080 (1 HSPs)
scaffold0080 (413-496)||(44003-44087)
[»] scaffold0092 (1 HSPs)
scaffold0092 (411-465)||(3308-3363)
[»] scaffold1272 (1 HSPs)
scaffold1272 (408-493)||(270-356)
[»] scaffold0231 (1 HSPs)
scaffold0231 (464-521)||(12990-13048)
[»] scaffold0068 (4 HSPs)
scaffold0068 (313-374)||(48225-48286)
scaffold0068 (313-374)||(61673-61734)
scaffold0068 (409-477)||(48124-48193)
scaffold0068 (409-477)||(61572-61641)
[»] scaffold0013 (2 HSPs)
scaffold0013 (413-489)||(35444-35520)
scaffold0013 (7-113)||(35816-35922)
[»] scaffold0162 (3 HSPs)
scaffold0162 (227-335)||(11862-11970)
scaffold0162 (64-113)||(6885-6934)
scaffold0162 (97-129)||(26340-26372)
[»] scaffold0029 (1 HSPs)
scaffold0029 (227-339)||(49877-49989)
[»] scaffold0367 (1 HSPs)
scaffold0367 (240-362)||(17356-17478)
[»] scaffold1734 (1 HSPs)
scaffold1734 (432-489)||(1364-1422)
[»] scaffold0075 (2 HSPs)
scaffold0075 (409-489)||(4906-4987)
scaffold0075 (318-374)||(5019-5075)
[»] scaffold0103 (1 HSPs)
scaffold0103 (314-374)||(33740-33800)
[»] scaffold0017 (1 HSPs)
scaffold0017 (484-524)||(12694-12734)
[»] scaffold0009 (2 HSPs)
scaffold0009 (413-496)||(69415-69499)
scaffold0009 (97-129)||(272330-272362)
[»] scaffold0615 (1 HSPs)
scaffold0615 (240-339)||(6258-6357)
[»] scaffold0244 (1 HSPs)
scaffold0244 (411-481)||(22715-22786)
[»] scaffold0090 (1 HSPs)
scaffold0090 (489-524)||(3392-3427)
[»] scaffold0413 (1 HSPs)
scaffold0413 (97-131)||(5990-6024)
[»] scaffold0058 (1 HSPs)
scaffold0058 (97-131)||(57392-57426)
[»] scaffold1500 (1 HSPs)
scaffold1500 (97-129)||(1431-1463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (97-129)||(1492-1524)
[»] scaffold0700 (1 HSPs)
scaffold0700 (413-496)||(2483-2567)
[»] scaffold0498 (1 HSPs)
scaffold0498 (97-129)||(9183-9215)
[»] scaffold0383 (1 HSPs)
scaffold0383 (97-129)||(2700-2732)
[»] scaffold0317 (1 HSPs)
scaffold0317 (240-336)||(12638-12734)
[»] scaffold0302 (1 HSPs)
scaffold0302 (97-129)||(12418-12450)
[»] scaffold0266 (1 HSPs)
scaffold0266 (97-129)||(1430-1462)
[»] scaffold0141 (2 HSPs)
scaffold0141 (97-129)||(22857-22889)
scaffold0141 (97-129)||(27112-27144)
[»] scaffold0124 (1 HSPs)
scaffold0124 (97-129)||(1496-1528)


Alignment Details
Target: chr3 (Bit Score: 381; Significance: 0; HSPs: 118)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 524
Target Start/End: Complemental strand, 7854433 - 7853913
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7854433 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaag 7854334  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  7854333 gtaagggggttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatc 7854234  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7854233 tttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 7854134  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||| || || |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||                  |||    
T  7854133 atggataattggtaaattatgttcaattggtgaattatgcatgattgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttag 7854037  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataat 500  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7854036 tcatatggttgatgataattcatggcttgggtttgcatgaatcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataat 7853937  T
Q  501 gaagaagtttgaatttgatgatgt 524  Q
    |||||||||||| |||||||||||    
T  7853936 gaagaagtttgattttgatgatgt 7853913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 13 - 493
Target Start/End: Complemental strand, 45582070 - 45581591
Alignment:
Q  13 agagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaaggggg-tt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||  |||||||||||||| ||||||||||||||||||| ||    
T  45582070 agagagaagaggaacttgaagaattcaagggtttgaagaatcataggagaaaaa-tgaagctagagctaatagttggagataattaaggtaaggggggtt 45581972  T
Q  112 agtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  45581971 agtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgaaattcg 45581872  T
Q  212 tgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagttt 311  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45581871 tgcttatgttgtagagatatgtttgaatatgttaatttgatgattaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagttt 45581772  T
Q  312 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttg 411  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                  |||||||||| |||    
T  45581771 gtaaattatgctcaattggtgaattatgcatgattgttgatgaattgtgatatgtttcatgattaatg---gttgttgttgttgtttagtcatatggttg 45581675  T
Q  412 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||||||| | ||||||| | |||||| || |||||||||    
T  45581674 atgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaaatgggt 45581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 98 - 524
Target Start/End: Original strand, 54685202 - 54685625
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    |||||||| |||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  54685202 aaggtaagtgggttagtctttatgataatcatttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 54685301  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54685302 atctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 54685401  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  54685402 aaaatgggtagttggtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtt 54685498  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgat 497  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  54685499 tagtcatatggttgatgataattcatggcttggatttgcatgattcatgattgttgttgagaaatgagttgctgttgctggttttgtaaaatgggttgat 54685598  T
Q  498 aatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||||||| |||||||||||    
T  54685599 aatgaagaagtttgattttgatgatgt 54685625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 481
Target Start/End: Original strand, 54037925 - 54038406
Alignment:
Q  1 agaactaggggtagagagaagaggaa---cttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataatt 97  Q
    ||||| |||| ||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  54037925 agaacaagggttagagagaagagggagagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagctaatagttggtgataatt 54038024  T
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||    
T  54038025 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaactca 54038124  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    || ||||  |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54038125 atgtttgacattcgtgcttatattgtagatatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 54038224  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||                      
T  54038225 aaaatgggtagtttgtaaattatgctaaattggtgaattatgcatggttgttgatgaaatgtgatatgtttcatgattaatggttgttgttgttgtt--- 54038321  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||| | |||||||| |||||| | ||||||| | ||||||    
T  54038322 tagtcatatagttgatgataattcatggcttgggtatgcatgattcataatttgttgttaagaaataaattgttgttgttggttt 54038406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 97 - 524
Target Start/End: Complemental strand, 33342236 - 33341812
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  33342236 taaggtaagagggttagtctttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 33342137  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  33342136 aatctttgaaattcgtgctaatgtggtagagatatgtttgaatatgttaatttgatgtttaatgaattgttgatgatgaaattgcaagttcatgatgtat 33342037  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnn 396  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||                     
T  33342036 gaaaatgggtagttggtaaattatgctcaattggtgaattatgcatggttgttgatgaattatgatatgtttcatgatcaatg---gttgttgttgttgt 33341940  T
Q  397 ntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33341939 ttagtcatatggttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttga 33341840  T
Q  497 taatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||| |||||| ||||    
T  33341839 taatgaagaagtttgattttgattatgt 33341812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 3993001 - 3992628
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| || |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  3993001 agaacaagggttaaagaggagaggaacttaaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 3992902  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||| ||| |    
T  3992901 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtaattatcatgaactcaacc 3992802  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  3992801 tttgaaatccgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaggttcatgatgtaggaaa 3992702  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3992701 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 3992628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 2844642 - 2844269
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||| | ||||||||||    
T  2844642 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagtttgagataattaag 2844543  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| ||||||| || ||||||||||||||||    
T  2844542 gtaagggggttagtttttatcataatcatttagttgattctttttctcttattctatgcataattgattatgggaataagcgattatcatgaacccaatc 2844443  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||||||||||||||||||||  | ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2844442 tttgaaattcgtgcttatgttgtagatttttgttttaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 2844343  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  2844342 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttcttgatgaattgtgataagtttcatgat 2844269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 17955781 - 17956274
Alignment:
Q  1 agaactaggggtagagagaagagg---aacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatg----agctaatagttggtgat 93  Q
    ||||| |||| |||||||||||||   || |||||||||||||||||||||||||||||| |||||||||||||||  |    ||||||||||||| |||    
T  17955781 agaacaagggttagagagaagagggagaatttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctaggtagagctaatagttggagat 17955880  T
Q  94 aattaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaa 193  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  17955881 aattaaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataatcgattatgagaataagtgattatcatgaa 17955980  T
Q  194 cccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatg 293  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17955981 cccaatctttgaaattcgtgcttatgtggtagagatatgtctgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatg 17956080  T
Q  294 tatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnn 393  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||                  
T  17956081 tatgaaaatgagtagtttgtaaattatactcaattggtgtattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgt 17956177  T
Q  394 nnnntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
        |||||||||  |||||||| || |||| |||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  17956178 tgtttagtcatattgttgatgatgatacatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 17956274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 97 - 502
Target Start/End: Complemental strand, 30153297 - 30152893
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  30153297 taaggtaagggggttagtttttatcataatcatttaattaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 30153198  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30153197 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 30153098  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnn 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                     
T  30153097 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgt 30153001  T
Q  397 ntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggtt 494  Q
     |||||||||  |||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| || ||||||||||    
T  30153000 ttagtcatattgttgatgatgatatatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaaatgggtt 30152901  T
Q  495 gataatga 502  Q
    ||| ||||    
T  30152900 gattatga 30152893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 55513321 - 55513006
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  55513321 agaacaagggttagagagaagaggagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 55513222  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||    
T  55513221 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatggaaataagtgattatcatgaacccaatc 55513122  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  55513121 tttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaattcgatgttaaatgaattgttgatgatgaaattgcaagttaatgatgtatgaaa 55513022  T
Q  301 atgggtagtttgtaaa 316  Q
    ||||||||||||||||    
T  55513021 atgggtagtttgtaaa 55513006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 53771397 - 53771119
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  53771397 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 53771298  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  53771297 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 53771198  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771197 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 53771119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 23492728 - 23492451
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  23492728 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 23492629  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  23492628 aatctttgaaattcttgcttatgttgtagagatatgtttgaatgtgttaatttgatgttaaatgaattgttgattatgaaattgcaagttcatgatgtat 23492529  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  23492528 gaaaatgggtagtttgtaaattatgctcaaatggtgaattatggatggttgttgatgaattgtgatatgtttcatgat 23492451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 16261809 - 16261531
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||||||    
T  16261809 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcgtaattgattatgagaataagtgattatcatgaacc 16261710  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  16261709 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 16261610  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16261609 cgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 16261531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 352
Target Start/End: Complemental strand, 28558610 - 28558271
Alignment:
Q  13 agagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataat-taaggtaagggggtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | || |   | ||  |  | || ||||||||| |||||    
T  28558610 agagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaattgaagcctaagttggga-ttaatctttatctaaggtaagagggtt 28558512  T
Q  112 agtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcg 211  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  28558511 agtttttatcataatcatttagttaattctttttctcttgttccatgcataattgattatgagaataagtgattatcatgaacctaatctttgaaattcg 28558412  T
Q  212 tgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagttt 311  Q
    |||||||||  |||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28558411 tgcttatgtgatagagatatgtttgaatatgttaatttgatgataaataaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagttt 28558312  T
Q  312 gtaaattatgctcaattggtgaattatgcatggttgttgat 352  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  28558311 gtaaatgatgctcaattggtgaattatgcatggttgttgat 28558271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 38168269 - 38167992
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  38168269 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 38168170  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38168169 aatctttgaaattcgtacttatgttgtagaaatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 38168070  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||| ||||||||||    
T  38168069 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgctatgttgttgatgaattgtaataagtttcatgat 38167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 97 - 339
Target Start/End: Complemental strand, 18970277 - 18970034
Alignment:
Q  97 taaggtaagggggttagttttta-tcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    ||||||||||||||||| ||| | |||||| || ||||||| ||  ||||||||| |||||| ||||| |||||||  |||||||||| ||| |||||||    
T  18970277 taaggtaagggggttagatttcaatcataaccacttagttagtttcttttctctttttctatgcataagtgattatttgaataagtgattattatgaacc 18970178  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| |||||||||| ||||||||| ||||||||| |  |||||||||||||||||| ||||||||||||||| ||||| || ||||||||||||    
T  18970177 caatctttgaaattcgtgctcatgttgtagtgatatgtttaagtatgttaatttgatgttaattgaattgttgatgatgaaatttcatgttcatgatgta 18970078  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    || ||||||||||||||| ||||||||||||||| |||||||||    
T  18970077 tgtaaatgggtagtttgtgaattatgctcaattgatgaattatg 18970034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 64 - 336
Target Start/End: Complemental strand, 15550986 - 15550714
Alignment:
Q  64 aaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataa 163  Q
    |||||||||| || ||||  | ||||||||||||||| ||||||||||||  || |||||||||| ||||||||||  |  |||||  || ||| |||||    
T  15550986 aaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatcataatcacttagttaatttctactctctctttttatgcataa 15550887  T
Q  164 ttgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaat 263  Q
     || | ||  |||||||||| |||  |||||||||  |||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| |||||    
T  15550886 gtgctaatttgaataagtgattattgtgaacccaacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaat 15550787  T
Q  264 tgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||||||| |||||||| |||||||||||||  ||||||||||||||| |||| |||||||||| ||||||    
T  15550786 ttttgatgatgaaattgcatgttcatgatgtatataaatgggtagtttgtgaattgtgctcaattgatgaatt 15550714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 19946744 - 19946629
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||    
T  19946744 ttgatgataatccatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataatatagaagt 19946645  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  19946644 ttgattttgatgatgt 19946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 174 - 339
Target Start/End: Complemental strand, 48421855 - 48421690
Alignment:
Q  174 gaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgat 273  Q
    |||||||||| |||  ||||||||||||||| ||||| |||| ||||||||| |||||||||||  |||||||||||||| ||| |||||||||| ||||    
T  48421855 gaataagtgattattgtgaacccaatctttgaaattcatgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttggtgat 48421756  T
Q  274 caaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
     |||||||| |||||||||||||  ||||||||||||||  ||||||| |||||||||||||||||    
T  48421755 gaaattgcatgttcatgatgtatataaatgggtagtttgagaattatgttcaattggtgaattatg 48421690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 19232205 - 19232089
Alignment:
Q  13 agagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtta 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||| ||||||||||||||||||||||    
T  19232205 agagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggtta 19232106  T
Q  113 gtttttatcataatcat 129  Q
    || |||||| |||||||    
T  19232105 gtctttatcttaatcat 19232089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15857067 - 15857195
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||  ||||||||| |||| ||||||||||    
T  15857067 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgatgaatcataggagctaaagtgaagctagagctaatacttggagataattaag 15857166  T
Q  101 gtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||| || |||||||||||    
T  15857167 gtaagggggttagtcttcatcataatcat 15857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 418 - 524
Target Start/End: Original strand, 47784957 - 47785064
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaattt 516  Q
    ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| |||    
T  47784957 attcatggcttgggtgttcataattcatgatttgttggtgagaaatgagttgttgttggtgattctgtaaaatgggttgataatgaagaagtttgatttt 47785056  T
Q  517 gatgatgt 524  Q
    ||||||||    
T  47785057 gatgatgt 47785064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 16743951 - 16744073
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagg 106  Q
    |||| |||||||| ||||| |||||||||||||||| |||| ||||||||| |||| ||||||||||  |||||||||||||| |||||||||||||| |    
T  16743951 agggttagagagaggaggagcttgaagaattcaaggatttggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaacg 16744050  T
Q  107 gggttagtttttatcataatcat 129  Q
     ||||||| |||| |||||||||    
T  16744051 aggttagtctttaccataatcat 16744073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 9303343 - 9303425
Alignment:
Q  443 catgattgttgttgagaaa-tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||||    
T  9303343 catgattgttgttgagaaaatgagttgttgttggtggttttgtaaaacgggttgataaagaagaagtttgattttgatgatgt 9303425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14295484 - 14295415
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  14295484 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtg 14295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14298467 - 14298399
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  14298467 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 14298399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14304094 - 14304026
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  14304094 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 14304026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 16996172 - 16996228
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16996172 tatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 16996228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 493
Target Start/End: Original strand, 17523091 - 17523176
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||| |||| ||| || |||||||||    
T  17523091 ttgatgataattcatggcttgggtttgcatgatttatgatttgtgttgagaaatgagatgttgttggtgttttggtgaaaatgggt 17523176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 317621 - 317677
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  317621 tatgctaaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 317677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 17139554 - 17139474
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||| ||| |||| ||||||    
T  17139554 ttgatgataattcatggcttgggtatgcatgattcatgatttgttgttgcgaaatgagatgttgttggtagtttggtaaaa 17139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 35123742 - 35123674
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  35123742 ttgatgataattcatggtttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 35123674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 50112164 - 50112220
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  50112164 tatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 50112220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 22144358 - 22144441
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  22144358 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaagtatgcattgttgttgatgaattgtgataagtttcatgat 22144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 28558263 - 28558188
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| | |||||||    
T  28558263 tagtcatatggttgatgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgt 28558188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 6146832 - 6146913
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatg 372  Q
    |||||||||||||||| || |  ||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  6146832 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaatcatgcattgttgttgatgaattgtgataagtttcatg 6146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 6154419 - 6154500
Alignment:
Q  294 tatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||| || |  ||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  6154419 tatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttattgatgaattgtgataagtttcatgat 6154500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 11329162 - 11329235
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||| ||| ||||    
T  11329162 ttgatgataattcatggcttgggtatgcatgattcatgatttgttgatgagaaatgagatgttgttggtagttt 11329235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 14528213 - 14528286
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||| ||||||||    
T  14528213 ttgatggtaattcatggcttgggtatgaatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 14528286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 477
Target Start/End: Original strand, 19570801 - 19570957
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgata 417  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||| |||                   ||||||| |  |||||||||    
T  19570801 tatgctcaattggtgaattatgcattgttgttggtgaattgtgataagtttcatgatcaat---tgttgttgttgttgtttagtcatgttgttgatgata 19570897  T
Q  418 attcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||| |||||||| |||| || |||||||||||||||||| |||||| ||||    
T  19570898 attcatggcttgagtttgcataattcttggttgttgttgagaaatgagatgttgttggtg 19570957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 34439451 - 34439512
Alignment:
Q  313 taaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  34439451 taaaatatgctcaattggtgaattatgcattgttgttgatgaattatgataagtttcatgat 34439512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 12349843 - 12349899
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  12349843 tatgctcaattggtgaattatgcatcgtagttgatgaattgtgataagtttcatgat 12349899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 13817646 - 13817590
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  13817646 tatgctcaattggtgaattatgcattgttgttggtgaattgtgataagtttcatgat 13817590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 472
Target Start/End: Original strand, 14059414 - 14059478
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgat-tgttgttgagaaatgagttgttgt 472  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||    
T  14059414 ttgatgataattcatggcttgggtttgcataattcatgatctgttgatgagaaatgagatgttgt 14059478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 409 - 471
Target Start/End: Original strand, 16182146 - 16182209
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttg 471  Q
    |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||    
T  16182146 ttgatgataattcatggcttgggtttgcataattcttggattgttgttgagaaatgagatgttg 16182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 53898541 - 53898624
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||    
T  53898541 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgttgcattgtgataagtttcatgat 53898624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 53898660 - 53898719
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||    
T  53898660 tgataattcatggcttgggtttgcaagattcatgatttatgttgagaaatgagatgttgt 53898719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 14177019 - 14177105
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgat 292  Q
    ||||||| || ||||||||| ||||||||| |  ||||| |||||||| ||| ||||||||||||||| |||||||| |||||||||    
T  14177019 aattcgtcctcatgttgtagtgatatgtttcagtatgttcatttgatgataattgaattgttgatgatgaaattgcatgttcatgat 14177105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 17960520 - 17960602
Alignment:
Q  415 ataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||| ||||||| ||||| |||||||||| |||| || ||||||||||||||| ||||  |||||||||||||||||    
T  17960520 ataattcatgacttgggtgtgcataattcatgatttgttgatgggaaatgagttgttgttggtgactttgtaaaatgggttga 17960602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 19946962 - 19946812
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | ||||  |||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  19946962 atgaacccaatctttgaatttcgtgctcttgttttggtgataaatttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 19946863  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    | ||||||||||||| ||||||   |||||||||| ||||| ||| |||||    
T  19946862 taatgtatgaaaatgagtagttgtgaaattatgcttaattgatgatttatg 19946812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 13817561 - 13817492
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  13817561 ttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 13817492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 22144473 - 22144542
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||||| |||||| ||||    
T  22144473 ttgatgataatacatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtg 22144542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 55441050 - 55441123
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||| ||||||| ||||| |||||||| || ||||||||||||||| |||||| ||||||||    
T  55441050 ttgatgataattcatgacttgggtatgcataattcatgattttttgttgagaaatgagatgttgttggtggttt 55441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 12349652 - 12349708
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  12349652 tatgctcaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 12349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 17100787 - 17100731
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  17100787 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 17100731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 17101472 - 17101416
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  17101472 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 17101416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 496
Target Start/End: Original strand, 38811209 - 38811297
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||| ||||||||||||||| ||||| ||||||| || | || | |||||||||||||||| ||||  |||||||||||||||||    
T  38811209 ttgatgatgattcatggcttgggtgtgcataattcatgttttgatgatcagaaatgagttgttgttggtgactttgtaaaatgggttga 38811297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 54424146 - 54424090
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  54424146 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 54424090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 455 - 497
Target Start/End: Complemental strand, 1990801 - 1990759
Alignment:
Q  455 tgagaaatgagttgttgtcggtggttttgtaaaatgggttgat 497  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  1990801 tgagaaatgagttgttgttggtggttttgtaaaatgggttgat 1990759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 14285225 - 14285075
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||| | ||| | ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  14285225 atgaacccaacccttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 14285126  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |  |||||||||||||||||||   ||| |||||| ||||| |||||||||    
T  14285125 tagtgtatgaaaatgggtagttgtgaaaatatgcttaattgatgaattatg 14285075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 8275853 - 8275986
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  | | |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  8275853 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 8275952  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    | |||   |||||||||| ||||| |||||||||    
T  8275953 ttgttatgaaattatgcttaattgatgaattatg 8275986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 9303108 - 9303241
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  9303108 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 9303207  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    | |||   |||||||||| ||||| ||| |||||    
T  9303208 ttgttgtgaaattatgcttaattgatgacttatg 9303241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14301111 - 14301042
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||| ||||||| ||| |||||||||||||||||  |||||||||||||||||| |||||| ||||    
T  14301111 ttgatgattattcatgtctttggtttgcatgattcatgttttgttgttgagaaatgagatgttgttggtg 14301042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 469
Target Start/End: Original strand, 16996260 - 16996321
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgt 469  Q
    ||||||||||||||||||||| |||||||| |||| | | ||||||||||||||||||||||    
T  16996260 ttgatgataattcatggcttgagtttgcataattcttggtttgttgttgagaaatgagttgt 16996321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 50112252 - 50112309
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgag 465  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||    
T  50112252 ttgatgataattcatggcttgagtttgcatgattcatggtttgtttttgagaaatgag 50112309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 14298555 - 14298499
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | |||||||  ||||||||||| ||||||||||    
T  14298555 tatgctcaattggtgaattatgctttgttgttgtcgaattgtgataagtttcatgat 14298499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 14304182 - 14304126
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | |||||||  ||||||||||| ||||||||||    
T  14304182 tatgctcaattggtgaattatgctttgttgttgtcgaattgtgataagtttcatgat 14304126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 19260952 - 19261008
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||| |   |||||||||||||||||||| ||||||||||    
T  19260952 tatgctcaattggtgaattatactaagttgttgatgaattgtgataagtttcatgat 19261008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 35123830 - 35123774
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||| ||||||||||    
T  35123830 tatgctcaattggtgaattatgctttgttgttattgaattgtgataagtttcatgat 35123774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 12560439 - 12560510
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| |||||| |||||||||| |||||||||||||| ||| |||||||||||||| |||||| ||| ||||    
T  12560439 gatgttaattcctggcttgggtatgcatgattcatgatttgatgttgagaaatgagatgttgttggtagttt 12560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 502
Target Start/End: Complemental strand, 12953006 - 12952915
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatga 502  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||||||||||||||| | ||||||||| ||||||||||||| ||||    
T  12953006 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaaatgggttgattatga 12952915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 16182032 - 16182114
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| |||||  |||||||||||||||||| || ||||||||||||||||| |||| |||||    
T  16182032 tgtatgaaaatgggta-tgtgtgaaaatatgccaaattggtgaattatgcattgtcgttgatgaattgtgataagtttaatgat 16182114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 16934016 - 16934115
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  16934016 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 16934115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 17204742 - 17204667
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaa 487  Q
    |||| ||||||||||||||| |  || |||||||||| |||| ||||||||||||||||||  |||||||||||||    
T  17204742 tgatgattcatggcttgggtgtttataattcatgatttgttgatgagaaatgagttgttgttagtggttttgtaaa 17204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 17523002 - 17523057
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatga 373  Q
    |||||||||||||||||||||||   ||| |||||||||||||||| |||||||||    
T  17523002 tatgctcaattggtgaattatgctatgttattgatgaattgtgataagtttcatga 17523057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 23492417 - 23492346
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  23492417 gatgctaattcatggcttgggtatgcatgattcatagtttgttgttgtgaaataagttgttgttgttggttt 23492346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 12539070 - 12539156
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgat 292  Q
    ||||||||||  |||| ||| |||||| ||||  |||| |||||| || ||| ||||||||||||||| |||||||| |||||||||    
T  12539070 aattcgtgctcttgttttagtgatatggttgagtatgtgaatttgttgataattgaattgttgatgatgaaattgcatgttcatgat 12539156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 38167958 - 38167896
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| |||||||||    
T  38167958 gatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgt 38167896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 38810814 - 38810943
Alignment:
Q  2 gaactaggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    |||| |||| |||| ||||||||| |||||||| ||||||   | ||||| ||| || |||| |||||||||| || ||||  | |||||||||| ||||    
T  38810814 gaacaagggttagatagaagaggagcttgaaga-ttcaagaactggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataactaag 38810912  T
Q  101 gtaagggggttagtttttatcataatcattt 131  Q
    |||||||||||||  || |||||||||||||    
T  38810913 gtaagggggttagaattcatcataatcattt 38810943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 54424056 - 54423986
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||| ||||||||||||||| ||||||||||||||||  |  |||||||| ||||||||| | ||||||    
T  54424056 gatgattattcatggcttgggtatgcatgattcatgatttgttatgagaaataagttgttgttgttggttt 54423986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 3992594 - 3992522
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  3992594 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 3992522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 8268753 - 8268886
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  | | |||||||||||||| |||| ||||  || |||||| |||||||||||| ||    
T  8268753 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaattgg 8268852  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    | |||   |||||||||| ||||| |||||||||    
T  8268853 ttgttatgaaattatgcttaattgatgaattatg 8268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 17100697 - 17100636
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttg 471  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||    
T  17100697 gatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttg 17100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 17101382 - 17101321
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttg 471  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||    
T  17101382 gatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttg 17101321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 3576643 - 3576703
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||| | ||| |||||||| |||||| ||||||||||||||||||    
T  3576643 tgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgt 3576703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 12349931 - 12349970
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt 449  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  12349931 ttgatgataattcatggcttggg-ttgcatgattcatgatt 12349970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 296
Target Start/End: Complemental strand, 17393710 - 17393590
Alignment:
Q  176 ataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatca 275  Q
    |||||||| ||| ||||||  |||  ||| ||||||||||   ||||||| ||||||||||   ||||||||||| || ||| |||||| |||| ||| |    
T  17393710 ataagtgattattatgaacttaattgttgaaattcgtgctctagttgtagtgatatgtttgggtatgttaatttgttgataattgaattattgacgatga 17393611  T
Q  276 aattgcaagttcatgatgtat 296  Q
    ||||||| ||||||| |||||    
T  17393610 aattgcatgttcatgctgtat 17393590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 444
Target Start/End: Complemental strand, 8631836 - 8631801
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattca 444  Q
    |||||||| |||||||||||||||||||||||||||    
T  8631836 ttgatgatcattcatggcttgggtttgcatgattca 8631801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 13301326 - 13301401
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||| |||||||||| || ||||  | || ||| |||||||||||||||||||||  || ||||||||||||||||    
T  13301326 gagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcatttagt 13301401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 13311982 - 13312057
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||| |||||||||| || ||||  | || ||| |||||||||||||||||||||  || ||||||||||||||||    
T  13311982 gagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcatttagt 13312057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 37915294 - 37915361
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgat 273  Q
    ||||||||||   ||||||| ||||||||||   ||||||||||| |||||| |||||||||||||||    
T  37915294 aattcgtgctctagttgtagtgatatgtttgggtatgttaatttgttgttaattgaattgttgatgat 37915361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 472
Target Start/End: Complemental strand, 53771080 - 53771022
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  53771080 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 53771022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 11402898 - 11402752
Alignment:
Q  144 ttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgt 243  Q
    |||||| ||||||| || || || ||||  |||||||||| |||  |||||  |||  ||| |||||||||| || || ||| |||||||||||  || |    
T  11402898 ttctctagttctatgcacaagtgcttatttgaataagtgattattgtgaacttaattgttgaaattcgtgctcatattatagtgatatgtttgagtatat 11402799  T
Q  244 taatttgatgttaaatgaattgttgatgatcaaattgcaagttcatg 290  Q
     ||||||||| ||| |||||||||| |||| ||||| || |||||||    
T  11402798 gaatttgatgataattgaattgttgttgatgaaatttcatgttcatg 11402752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 497
Target Start/End: Original strand, 12488927 - 12489017
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    |||||||||||||||||||||||| | ||| |||||||| ||  || || ||||| ||||||||| | |||||| || |||||||||||||    
T  12488927 ttgatgataattcatggcttgggtgttcataattcatgatttaatgatgggaaataagttgttgttgttggtttggtgaaaatgggttgat 12489017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 17205073 - 17205019
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttag 113  Q
    |||| |||||||||| || ||||  | ||||||||||||||||||||||||||||    
T  17205073 gagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 17205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 317709 - 317778
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||| ||||| || |||| | | ||||||| |||||||||| |||||| ||||    
T  317709 ttgatgataattcatggcttgagtttgtataattcttggtttgttgtggagaaatgagatgttgttggtg 317778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 6146947 - 6147015
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgt-tgttgagaaatgagttgttgtcggtg 477  Q
    ||||| |||||||||||||||||||| |||||||||||||| | | | |||||||||| |||||| ||||    
T  6146947 ttgataataattcatggcttgggttt-catgattcatgattttgtatggagaaatgagatgttgttggtg 6147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 6154532 - 6154600
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgt-tgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||| ||||||||||||| ||| | | | |||||||||| |||||| ||||    
T  6154532 ttgatgataattcatggcttggg-ttgcatgattcataattttgtatggagaaatgagatgttgttggtg 6154600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 15615170 - 15615137
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| ||||||||||||||    
T  15615170 ttaaggtaagggggttagtctttatcataatcat 15615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 17191583 - 17191511
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaa 487  Q
    |||| |||||||||||| || | ||| |||||||||| |||| ||||||||||||||||   ||||||||||||||    
T  17191583 tgatgattcatggcttgagtgttcataattcatgatttgttgatgagaaatgagttgtt---ggtggttttgtaaa 17191511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 19261047 - 19261104
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| | ||||||||  ||||| |||||||||    
T  19261047 taattcatggcttgggtatgcatgattcataatttgttgttatgaaataagttgttgt 19261104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Complemental strand, 34559898 - 34559857
Alignment:
Q  455 tgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  34559898 tgagaattgagttgttgttgttggttttgtaaaatgggttga 34559857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 39656494 - 39656453
Alignment:
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||||||||| ||||||  |||||||||||||||||    
T  39656494 aaaatgggtagtttgtgaattatattcaattggtgaattatg 39656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 51961031 - 51961068
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||||||||||||||||| || ||||||||||||||||    
T  51961031 taaggtaagggggttagtcttcatcataatcatttagt 51961068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 2050147 - 2050115
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  2050147 taaggtaagggggttagtctttatcataatcat 2050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 2449152 - 2449184
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  2449152 taaggtaagggggttagtctttatcataatcat 2449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 2844235 - 2844172
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||| | |||||||||    
T  2844235 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaagtaagttgttgt 2844172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 8268650 - 8268682
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  8268650 taaggtaagggggttagttattatcataatcat 8268682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 8275750 - 8275782
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  8275750 taaggtaagggggttagttattatcataatcat 8275782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 9590959 - 9591035
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||| ||||||| ||||||| | |||  ||||||||| | || |||||||||||||||||| | |||||||||||||    
T  9590959 tgatgattcatgacttgggtgttcatagttcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaa 9591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 12031901 - 12031849
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtt 111  Q
    |||| |||||||||| || ||||  | ||||||||||||||||||||||||||    
T  12031901 gagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtt 12031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 14842487 - 14842519
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  14842487 taaggtaagggggttagtctttatcataatcat 14842519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 447
Target Start/End: Complemental strand, 16880167 - 16880131
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga 447  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  16880167 gatgataattcatggcttgggtgtgcataattcatga 16880131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 16933869 - 16933901
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  16933869 taaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 17912398 - 17912430
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  17912398 taaggtaagggggttagtctttatcataatcat 17912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 18911332 - 18911300
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  18911332 taaggtaagggggttagttattatcataatcat 18911300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 19260749 - 19260781
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  19260749 taaggtaagggggttagtctttatcataatcat 19260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 38527889 - 38527841
Alignment:
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgc 340  Q
    ||||||||||||||||  | | ||| |||||||||||||||||||||||    
T  38527889 tgtatgaaaatgggtatgtgggaaaatatgctcaattggtgaattatgc 38527841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 335; Significance: 0; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 35014961 - 35015447
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  35014961 agaacaagggttggagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 35015060  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  35015061 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatc 35015160  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35015161 tttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 35015260  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||    
T  35015261 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttag 35015357  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||  |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  35015358 tcatattgttgatgatgatacatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 35015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 19983096 - 19983581
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  19983096 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 19983195  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  19983196 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaatccaatc 19983295  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19983296 tttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 19983395  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||||||||||  ||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| ||                  |||    
T  19983396 atgggtagttt-aaaactatgctcaattagtgaattatgcatgattgttgatgaattgtgatatgtttcatggttagtg---gttgttgttgttgtttag 19983491  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||  |||||||| || ||||||||||||||||||||||||| | ||||||||||||||||  ||||||| ||||||||||| ||||    
T  19983492 tcatattgttgatgatgatacatggcttgggtttgcatgattcatggtttgttgttgagaaatggattgttgttggtggttttgtgaaat 19983581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 18583768 - 18583395
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  18583768 agaacaagggttggagagaagaggaacttgaagaattcaagagtttgaagaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaag 18583669  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||||||||||||||    
T  18583668 gtaagggggttagttttcatcataatcatttagttaattctttttctcctgttctatgcatcattgattatgggaataagtgattatcatgaacccaatc 18583569  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18583568 tttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 18583469  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583468 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 18583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 23995279 - 23995001
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  23995279 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 23995180  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  23995179 caatatttggaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 23995080  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23995079 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 23995001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 26090091 - 26089813
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  26090091 taaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 26089992  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26089991 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcataatgta 26089892  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26089891 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 26089813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 18002395 - 18002673
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| | |||||||| |||||||||||    
T  18002395 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgggcataagtgattatcatgaacc 18002494  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18002495 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttcatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgta 18002594  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18002595 tgaaaatgggtagtttgtaaattatgctcaattgatgaattatgcatggttgttgatgaattgtgatatgtttcatgat 18002673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 15742120 - 15742397
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||    
T  15742120 taaggtaagggggttagtctttatcataatcctttggttaattctttttctcttgttc-atgcataattgattatgagaataagtgattatcatgaaccc 15742218  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatg-ttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  15742219 aatctttgaaattcgtgcttatgttgtagagatatgtttgattatgttaatttgatgattaaatgaattgttgatgatgaaattgcaagttcatgatgta 15742318  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15742319 tgaaaatgggtaatttgtatattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 15742397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 98 - 339
Target Start/End: Complemental strand, 4991427 - 4991186
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcatttgtttaattctttttctcttgattttatgcataattgattatgagaataagtgattatcatgaaccc 4991328  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||| ||||   | |||||| ||||||    
T  4991327 aatctttgaaattcgtgcttatgttgtagagatatgtttggatatgtt-atttgatgttaaatgaatggttgatgatgaaataatatgttcataatgtat 4991229  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||| |||   |||||||||| ||||| ||| |||||    
T  4991228 gaaaatgggttgttgtgaaattatgcttaattgatgacttatg 4991186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 93 - 362
Target Start/End: Original strand, 15889601 - 15889871
Alignment:
Q  93 taattaaggtaagggggttagttttta-tcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| ||||||||||||||| ||| | ||||||||| ||||||||||  || |||||| |||||| ||||| || ||||  ||||| |||| |||  ||    
T  15889601 taattgaggtaagggggttagatttcaatcataatcacttagttaatttcttctctctttttctatgcataagtgtttatttgaatacgtgattattgtg 15889700  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
    ||||||| ||||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| ||| ||||||||||| |||||||| ||||||||    
T  15889701 aacccaacctttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgatttgttgatgatgaaattgcatgttcatga 15889800  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    |||||  ||||||||||||||| ||||||| |||| || ||||||||| ||| |||||||||||||||||||    
T  15889801 tgtatataaatgggtagtttgtgaattatgttcaactgatgaattatgacat-gttgttgatgaattgtgat 15889871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 93 - 362
Target Start/End: Original strand, 22585441 - 22585711
Alignment:
Q  93 taattaaggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| ||||||||||||||| ||| |  |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  |||||||||| |||  ||    
T  22585441 taattgaggtaagggggttagatttcaagcataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattttg 22585540  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||  || ||||||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  22585541 aacccaatctttgaaattcgtgctcatgttgtagtgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttcatga 22585640  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    |||||  ||||||||||||||| |||||||||||||||  |||||||| ||| ||||||| |||||||||||    
T  22585641 tgtatataaatgggtagtttgtgaattatgctcaattgaagaattatgacat-gttgttgttgaattgtgat 22585711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 93 - 362
Target Start/End: Original strand, 22590272 - 22590542
Alignment:
Q  93 taattaaggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| ||||||||||||||| ||| |  |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  |||||||||| |||  ||    
T  22590272 taattgaggtaagggggttagatttcaagcataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattttg 22590371  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||  || ||||||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  22590372 aacccaatctttgaaattcgtgctcatgttgtagtgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttcatga 22590471  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    |||||  ||||||||||||||| |||||||||||||||  |||||||| ||| ||||||| |||||||||||    
T  22590472 tgtatataaatgggtagtttgtgaattatgctcaattgaagaattatgacat-gttgttgttgaattgtgat 22590542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 18583379 - 18583264
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18583379 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaagt 18583280  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  18583279 ttgattttgatgatgt 18583264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 121 - 363
Target Start/End: Original strand, 15004831 - 15005072
Alignment:
Q  121 cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgt 220  Q
    |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  ||||||| || |||  ||||||||||||||| |||||||||| ||||    
T  15004831 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagagattattgtgaacccaatctttgaaattcgtgctcatgt 15004930  T
Q  221 tgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattat 320  Q
    ||||| |||||||||||  |||| ||||||||||| | ||||||||||||||  |||||||| ||| |||||||||  ||||||||||||||| ||||||    
T  15004931 tgtagtgatatgtttgagtatgt-aatttgatgttgattgaattgttgatgaggaaattgcatgtttatgatgtatataaatgggtagtttgtgaattat 15005029  T
Q  321 gctcaattggtgaattatg-catggttgttgatgaattgtgata 363  Q
    | ||||||| ||||||||| ||| ||||||| ||||||||||||    
T  15005030 gttcaattgatgaattatgacat-gttgttgttgaattgtgata 15005072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 25640456 - 25640694
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||  || |||||||||| |||| |||||  |  |||||| |||||| ||||| || ||||  |||||||||| |||  |||||||    
T  25640456 taaggtaagggggttagaattcatcataatcacttaggtaatttctactctctttttctatgcataagtgcttatttgaataagtgattattgtgaaccc 25640555  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    ||  |||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||     
T  25640556 aacttttgaaattcgtgctcatgttgtag-gatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtag 25640654  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
      ||||||||||||||| |||| |||||||||| ||||||    
T  25640655 ataaatgggtagtttgtgaattgtgctcaattgatgaatt 25640694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 18823597 - 18823712
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||| ||||||||    
T  18823597 ttgatgataatccatggcttgggtttgcatgattcatgattgttgtggagaaatgagttgttggtggtggttttgtaaaatggcttgataaagaagaagt 18823696  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  18823697 ttgattttgatgatgt 18823712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 18839452 - 18839567
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||| || ||||||||    
T  18839452 ttgatgataatccatggcttgggtttgcatgattcatgattgttgtggagaaatgagttgttggtggtggttttgtaaaatgagttgaaaaagaagaagt 18839551  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  18839552 ttgattttgatgatgt 18839567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 4991085 - 4991002
Alignment:
Q  442 tcatgattgttgttgagaaa-tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  4991085 tcatgattgttgttgagaaaatgagttgttgttggtggttttgtaaaatgggttgataaagaagaagtttgattttgatgatgt 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 190 - 336
Target Start/End: Original strand, 32276756 - 32276902
Alignment:
Q  190 tgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcat 289  Q
    ||||||||||||||| | ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || ||||||    
T  32276756 tgaacccaatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 32276855  T
Q  290 gatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
     ||||||||||||||||||||   |||||||||| ||||| ||||||    
T  32276856 aatgtatgaaaatgggtagttgtgaaattatgcttaattgatgaatt 32276902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 524
Target Start/End: Original strand, 17083383 - 17083496
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatgaagaagttt 510  Q
    |||| ||||||||||||||| | ||| | |||||||| | || | |||||||||||||||| | || |||||| ||||||||||||||||||||||||||    
T  17083383 tgatgattcatggcttgggtgttcataaatcatgatttgatgattagaaatgagttgttgttgttgtttttgtgaaaatgggttgataatgaagaagttt 17083482  T
Q  511 gaatttgatgatgt 524  Q
    || |||||||||||    
T  17083483 gattttgatgatgt 17083496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 31628314 - 31628245
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||    
T  31628314 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgtggagaaatgagatgttgttggtg 31628245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 502
Target Start/End: Complemental strand, 18398984 - 18398890
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatga 502  Q
    |||||||||||||||||||||||| ||||| |||||||| |  || | |||||||||||||||| | ||||||||| ||||||||||||| ||||    
T  18398984 ttgatgataattcatggcttgggtgtgcataattcatgaattgtgataagaaatgagttgttgttgttggttttgtaaaaatgggttgattatga 18398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 370
Target Start/End: Original strand, 13014822 - 13014874
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttca 370  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  13014822 tatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttca 13014874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 32898924 - 32898868
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  32898924 tatgctcaattggtgaattatgcattattgttgatgaattgtgataagtttcatgat 32898868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 374
Target Start/End: Original strand, 25744331 - 25744382
Alignment:
Q  323 tcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  25744331 tcaagtggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 25744382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 19629577 - 19629447
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||||| | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  19629577 aattcgtgctcttgttgtggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 19629478  T
Q  306 tagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||   |||||||||| ||||| ||||||    
T  19629477 ttgttatgaaattatgcttaattgatgaatt 19629447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 18381888 - 18381965
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  18381888 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtgaaat 18381965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 32898836 - 32898779
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgag 465  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  32898836 ttgatgataattaatggcttgggtttgcatgattcatggtttgttgttgagaaatgag 32898779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 18570413 - 18570357
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  18570413 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 18570357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 22441068 - 22441012
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||    
T  22441068 tatgctcaattggtgaattatgcattgttgttcatgatttgtgataagtttcatgat 22441012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 16086060 - 16086001
Alignment:
Q  412 atgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttg 471  Q
    ||||||||||||| ||||||||||||||||||||||||  ||| |||||||||| |||||    
T  16086060 atgataattcatgacttgggtttgcatgattcatgatttatgtggagaaatgagatgttg 16086001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 25367443 - 25367502
Alignment:
Q  414 gataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||    
T  25367443 gataattcatggcttgggtgtgcatgattcatgaattgttgatgagaaatgagatgttgt 25367502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 18002707 - 18002777
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| ||||||||||||  ||||||||| ||||| ||||||||| | ||||||    
T  18002707 gatgctaattcatggcttgggtatgcatgattcatacttgttgttgtgaaataagttgttgttgttggttt 18002777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18777280 - 18777219
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||| ||||||||||||||||||   |||||||||||||||||||| |||||||||| ||||    
T  18777280 tatgttcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgatcaatg 18777219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 25744414 - 25744483
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| |||| | | ||||||| |||||||||| |||||| ||||    
T  25744414 ttgatgataattcatggcttgggtttgcataattcttggtttgttgtagagaaatgagatgttgttggtg 25744483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 26089779 - 26089718
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgt 472  Q
    |||| |||||||||| |||||| |||||||||||| |||||||||| ||||| |||||||||    
T  26089779 gatgctaattcatggtttgggtatgcatgattcataattgttgttgtgaaataagttgttgt 26089718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 26512385 - 26512260
Alignment:
Q  209 tcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtag 308  Q
    |||||||||| |||||||||||||||||   |    ||||||||| ||  |||||||||| || | ||||| || ||| ||||| |||  ||||||||||    
T  26512385 tcgtgcttatcttgtagagatatgtttgggtacaagaatttgatgatatttgaattgttgttgttgaaattacatgtttatgatatatataaatgggtag 26512286  T
Q  309 tttgtaaattatgctcaattggtgaa 334  Q
    ||||| ||||||||||||||| ||||    
T  26512285 tttgtgaattatgctcaattgatgaa 26512260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 334
Target Start/End: Complemental strand, 26517501 - 26517376
Alignment:
Q  209 tcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtag 308  Q
    |||||||||| |||||||||||||||||   |    ||||||||| ||  |||||||||| || | ||||| || ||| ||||| |||  ||||||||||    
T  26517501 tcgtgcttatcttgtagagatatgtttgggtacaagaatttgatgatatttgaattgttgttgttgaaattacatgtttatgatatatataaatgggtag 26517402  T
Q  309 tttgtaaattatgctcaattggtgaa 334  Q
    ||||| ||||||||||||||| ||||    
T  26517401 tttgtgaattatgctcaattgatgaa 26517376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 18432777 - 18432721
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  18432777 tatgcttaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 18432721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 22361970 - 22362054
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| |||||||| ||| || |||||| ||||||||||| | | |||||||||||||||||||    
T  22361970 tgatgattcatggcttgggtgttcataattcatgaattgatgatgagaattgagttgttgttgttagttttgtaaaatgggttga 22362054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 31628402 - 31628346
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  31628402 tatgcttaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 31628346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 471
Target Start/End: Complemental strand, 18432689 - 18432626
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttg 471  Q
    |||||||||||||||||||||||||||||||||| || | || ||||||| ||||||| |||||    
T  18432689 ttgatgataattcatggcttgggtttgcatgattaatggtttattgttgaaaaatgagatgttg 18432626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 18777190 - 18777119
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  18777190 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggttt 18777119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 22440980 - 22440911
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| | |||||||||| |||||| ||||    
T  22440980 ttgatgataattcatggcttggg-ttgcatgattcatgattttgttatggagaaatgagatgttgttggtg 22440911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Complemental strand, 15740269 - 15740211
Alignment:
Q  415 ataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgt 472  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||    
T  15740269 ataattcatggtttgggtgtgcatgattcatgaattgttgatgagaaatgagatgttgt 15740211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 15742439 - 15742505
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  15742439 taattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgctggttt 15742505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 28195295 - 28195367
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||||||| |||||||| ||| |||| || ||||||||||||||| |||||| ||| ||||    
T  28195295 ttgatgataattcatggcttgagtttgcataatt-atgatttattgttgagaaatgagatgttgttggtagttt 28195367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 16106650 - 16106594
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||| | | ||||||| |||||||||||| ||||||||||    
T  16106650 tatgcttaattggtgaattataccttgttgttgttgaattgtgataagtttcatgat 16106594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 16300010 - 16300122
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||  ||    
T  16300010 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcctaa 16300109  T
Q  327 ttggtgaattatg 339  Q
    ||| | |||||||    
T  16300110 ttgataaattatg 16300122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 18823417 - 18823529
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   || ||||||| ||    
T  18823417 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaagttatgcttaa 18823516  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  18823517 ttgatgacttatg 18823529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 18839300 - 18839384
Alignment:
Q  255 taaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  18839300 taaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 18839384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 21931429 - 21931333
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgct 323  Q
    |||||||||||| || | || |||||| ||| |||||||||| |||| |||||||| ||||||||| | |  |||||||||  |||| |||||||||    
T  21931429 gatatgtttgaatatatgaaattgatgataattgaattgttgttgatgaaattgcatgttcatgatatgtataaatgggtatattgtgaattatgct 21931333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 25919655 - 25919571
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| ||| ||||||||| |||| ||||  ||||||||||| |||||    
T  25919655 tgatgattcatggcttgggtattcataattcatgatttgttgatgaaaaatgagttattgttggtgactttgtaaaatgagttga 25919571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 21623611 - 21623506
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| ||||||||||| || |||||||| ||||||  || ||||| ||| || |||| |||||||||| || ||||  | ||||||||||||||||||||    
T  21623611 agggttagagagaagaagagcttgaaga-ttcaagaatt-gaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaag 21623514  T
Q  106 ggggttag 113  Q
    ||||||||    
T  21623513 ggggttag 21623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 472
Target Start/End: Complemental strand, 23994962 - 23994904
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  23994962 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 23994904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 17374928 - 17375018
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    ||||||||||   ||||||| |||||||||||  ||| ||||||| || ||| |||||| |||||||| ||||| || ||||||| |||||    
T  17374928 aattcgtgctctagttgtagtgatatgtttgagtatgctaatttgttgataattgaattattgatgatgaaattacatgttcatggtgtat 17375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 1650020 - 1650053
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| ||||||||||||||    
T  1650020 ttaaggtaagggggttagtctttatcataatcat 1650053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 16086151 - 16086095
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||| | | ||||||| |||||| ||||| ||||||||||    
T  16086151 tatgcttaattggtgaattataccttgttgttgttgaattatgataagtttcatgat 16086095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 16232231 - 16232199
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  16232231 taaggtaagggggttagttattatcataatcat 16232199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 19610357 - 19610325
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  19610357 taaggtaagggggttagttattatcataatcat 19610325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 33324735 - 33324675
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||| | ||| ||||||| |||| || ||||||||||||||||||    
T  33324735 tgatgattcatggcttgggtattcataattcatgaattggtgatgagaaatgagttgttgt 33324675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 35136217 - 35136277
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||| | ||| ||||||| |||| || ||||||||||||||||||    
T  35136217 tgatgattcatggcttgggtattcataattcatgaattggtgatgagaaatgagttgttgt 35136277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 481
Target Start/End: Original strand, 111073 - 111550
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  111073 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagctaaaagttggtgataattaag 111172  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||     
T  111173 gtaagggggttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgaaaataagtgattatcatgaacccaata 111272  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  111273 tttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaa 111372  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||    
T  111373 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttag 111469  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||| |||||||||||||||||||||||| |||||||||||   ||||||||||||||| | ||||||| | ||||||    
T  111470 tcatatggttgatgataattcatggcttgggtatgcatgattcaaatttgttgttgagaaataaattgttgttgttggttt 111550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 1 - 502
Target Start/End: Complemental strand, 126866 - 126366
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||   |||||||||||||| ||||||||||    
T  126866 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaaatgaagttagagctaatagttggagataattaag 126767  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  126766 gtaagggggttagtttttatcataatcatttagttaattctttttctattgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 126667  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  126666 tttgaaattcgtgcttatgttgcagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 126567  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||    
T  126566 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttag 126470  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttg-taaaatgggttgata 498  Q
    |||||   |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| |  |||||||||||||     
T  126469 tcatactgttgatgatgatacatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggagaaaatgggttgatt 126370  T
Q  499 atga 502  Q
    ||||    
T  126369 atga 126366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 493
Target Start/End: Original strand, 32493847 - 32494341
Alignment:
Q  1 agaactaggggtagagagaagag---gaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataatt 97  Q
    ||||| |||| ||||||||||||   || ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||    
T  32493847 agaacaagggttagagagaagagtgagagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataatt 32493946  T
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  32493947 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccca 32494046  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  32494047 atctttgaaattcgtgtttatgttgtagagatatgtttgaatatgttaatttgatgttaaataaattgttgatgatgaaattgcaagttcatgatgtatg 32494146  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      
T  32494147 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg---gttgttgttgttgtt 32494243  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||| | ||||||||||||||| | ||||||| | |||||| || |||||||||    
T  32494244 tagtcatatgattgatgataattcatggcttgtgtatgcatgattcataatttgttgttgagaaataaattgttgttgttggtttggtgaaaatgggt 32494341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 1936821 - 1937177
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||  ||| |||||||||| ||||||||||    
T  1936821 agaacaagggttagagagaagaggaactcgaagaattcaagggtttgaagaatcatagaagcaaaagtgaagctagagttaatagttggagataattaag 1936920  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  1936921 gtaaggaggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 1937020  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||     |||    
T  1937021 tttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttcatgatgaaattgcaagttcatgat-----aaa 1937115  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgat 362  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1937116 atgggtagtttgtaaattatgctcaattggtgaattatgtatggttgttgatgaattatgat 1937177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 2029276 - 2028999
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  2029276 taaggtaagggggttagtctttatcataatcatttagttaattttttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 2029177  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  2029176 aatctttgaaattcgtgcttatgttgtagatatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtac 2029077  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2029076 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatgattgttgatgaattgtgataagtttcatgat 2028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 42056188 - 42056466
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  42056188 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 42056287  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  42056288 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 42056387  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42056388 tgaaaatgggtagtttgtgaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 42056466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 2190085 - 2190363
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||    
T  2190085 taaggtaaggcggttagtttttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgtacc 2190184  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2190185 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 2190284  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2190285 tgaaaatggatagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 2190363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 3049937 - 3049661
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  3049937 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 3049838  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  3049837 aatctttgaaattcgtgtttatattgtagagatatgtttgaatatgttaatttgatgttaaatgaattg-ggatgatgaaattgcaagttcatgatgtat 3049739  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  3049738 gaatatgggtagtttgtaaattatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 3049661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 15516765 - 15516901
Alignment:
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacccaat 199  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  15516765 gtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacccaat 15516864  T
Q  200 ctttggaattcgtgcttatgttgtagagatatgtttg 236  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15516865 ctttgaaattcgtgcttatgttgtagagatatgtttg 15516901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7283860 - 7283987
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||    
T  7283860 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagttaataattggtgataattaag 7283959  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    ||||||||||||||||| ||||||||||    
T  7283960 gtaagggggttagttttcatcataatca 7283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3060399 - 3060271
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||| |||||| |||    
T  3060399 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcgtaggagcaaaagtgaagctagagctaatagttggagataatgaag 3060300  T
Q  101 gtaagggggttagtttttatcataatcat 129  Q
    |||||||||| ||| ||||||||||||||    
T  3060299 gtaagggggtaagtctttatcataatcat 3060271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 7284261 - 7284376
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  7284261 ttgataataattcatggcttgagtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgttaaatgggttgataatggagaagt 7284360  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| ||||| |||||    
T  7284361 ttgattttgacgatgt 7284376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 145 - 336
Target Start/End: Original strand, 39291457 - 39291648
Alignment:
Q  145 tctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgtt 244  Q
    |||||| |||||| ||||| |  ||||  |||||||||| |||  |||||| ||  |||| |||||||||| ||||||||| |||||||||||  |||||    
T  39291457 tctctttttctatgcataagtacttatttgaataagtgattattgtgaacctaacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgtt 39291556  T
Q  245 aatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
    ||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  39291557 aatttgatgataattgaattgttgatgatgaaattgcatgttgatgatgtatataaatgggtagtttgtgaattatgctcaattggtgaatt 39291648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 99 - 339
Target Start/End: Complemental strand, 13352306 - 13352065
Alignment:
Q  99 aggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    ||||||||||||||| ||| |  |||||||| ||| ||| ||  || |||||| |||||| ||||| || ||||  |||||||||| |||  ||||||||    
T  13352306 aggtaagggggttagatttcaagcataatcacttaattagtttcttctctctttttctatgcataagtgtttatttgaataagtgattattgtgaaccca 13352207  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    | | ||| |||||||||| ||||||||| ||||||||| |  |||||||||||||| ||  ||| ||||||||| | |||||||| |||||||||||||     
T  13352206 acccttgaaattcgtgctcatgttgtagtgatatgtttcagtatgttaatttgatgatatttgatttgttgatggtgaaattgcatgttcatgatgtata 13352107  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
     ||||||||||| | | ||||||||||||||| |||||||||    
T  13352106 taaatgggtagtattttaattatgctcaattgatgaattatg 13352065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 11287463 - 11287390
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  11287463 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 11287390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 413 - 524
Target Start/End: Original strand, 14272091 - 14272203
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttg 511  Q
    |||| |||||||||||| || | ||| |||||||||| | || |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||     
T  14272091 tgatgattcatggcttgagtgttcataattcatgattagatgatgagaaatgagttgttggtggtggttttgtaaaatgggttgatgatgaagaagtttt 14272190  T
Q  512 aatttgatgatgt 524  Q
    | ||| |||||||    
T  14272191 attttaatgatgt 14272203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 44865391 - 44865304
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaat 378  Q
    |||||||||||||||| || |  ||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  44865391 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcatttttgttgatgaattgtgataagtttcatgattaat 44865304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 16570209 - 16570287
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||| ||| ||||||    
T  16570209 gatgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgtgggtgttttggtaaaa 16570287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 411 - 488
Target Start/End: Complemental strand, 16595453 - 16595375
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||| ||| ||||||    
T  16595453 gatgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgtgggtgttttggtaaaa 16595375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 322 - 477
Target Start/End: Original strand, 39046740 - 39046893
Alignment:
Q  322 ctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgataattc 421  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||                   ||||||| |  |||||||||||||    
T  39046740 ctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgatcaat---tgttgttgttgttgtttagtcatgttgttgatgataattc 39046836  T
Q  422 atggcttgggtttgcatgattcatgat-tgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||| |||||| ||||    
T  39046837 atggcttgggtttgcataattcttgatctgttgttgagaaatgagatgttgttggtg 39046893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 489
Target Start/End: Original strand, 17224142 - 17224220
Alignment:
Q  412 atgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  17224142 atgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaaat 17224220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 45452367 - 45452435
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||| |||||| ||||    
T  45452367 ttgatgataattcatggcttgggttggcatgattcatgatttgtgtggagaaatgagatgttgttggtg 45452435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 49047879 - 49047955
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||| ||| |||| ||||||    
T  49047879 tgataattcatggcttgggtatgcatgattcatgatttgttgttgagaaacgagatgttgttggtagtttggtaaaa 49047955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 143800 - 143717
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  143800 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgctttgttgttgatgaattgtgaaaagtttcatgat 143717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 12248324 - 12248395
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  12248324 gatgataatgcatgacttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 12248395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 47289942 - 47289859
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  47289942 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgctttgttgttgatgaattgtgaaaagtttcatgat 47289859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 26070467 - 26070529
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  26070467 gatgattattcatggcttgggtatgcatgattcatgatttgttgttgagaaataagttgttgt 26070529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 26094254 - 26094316
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  26094254 gatgattattcatggcttgggtatgcatgattcatgatttgttgttgagaaataagttgttgt 26094316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 379
Target Start/End: Complemental strand, 35094974 - 35094889
Alignment:
Q  294 tatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||| | ||| ||| ||||||||||||||||||||||||  |||||||||||||||| | |||||||||||| ||||    
T  35094974 tatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcactgttgttgatgaattgttaaatgtttcatgatcaatg 35094889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 13377973 - 13377849
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| |||||||||||||| |||||||| || |||  || ||||| ||| || |||| |||||||||| || ||||  | ||||||||||||||||||||    
T  13377973 agggttagagagaagaggagcttgaagattt-aagaattggaagagatcttaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaag 13377875  T
Q  106 ggggttagtttttatcataatcattt 131  Q
    ||||||||  || |||||||||||||    
T  13377874 ggggttagaattcatcataatcattt 13377849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 15822632 - 15822701
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||| |||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| ||||    
T  15822632 ttgatgatcattcatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtg 15822701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 360
Target Start/End: Original strand, 15977820 - 15978004
Alignment:
Q  176 ataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatca 275  Q
    |||||||| ||| ||||||  ||| |||| ||||| ||||   ||||||| |||||||||||  ||||||||||| || ||| |||||| |||||||| |    
T  15977820 ataagtgattattatgaactaaatgtttgaaattcatgctctagttgtagtgatatgtttgagtatgttaatttgttgataattgaattattgatgatga 15977919  T
Q  276 aattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtg 360  Q
    ||||||| ||||||| |||||  | |||| || ||  | |||||| ||||| || ||||||||| ||| ||||||| |||||||||    
T  15977920 aattgcatgttcatggtgtatatatatggatacttgatgaattatactcaaatgatgaattatgacat-gttgttgttgaattgtg 15978004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 35094863 - 35094794
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||| |||||| ||||    
T  35094863 ttgatgataaatcatggcttgggtttgcataattcttgatttgttgttgagaaatgagatgttgttggtg 35094794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 3895159 - 3895103
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  3895159 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 3895103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 11287551 - 11287495
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  11287551 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 11287495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 12369953 - 12370013
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaat 378  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||  |||||||||||||    
T  12369953 tatgctcaattggtgaattatgccttgttgttgttgaattgtgataactttcatgattaat 12370013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 13274833 - 13274753
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||| ||||||||||| ||| |||||||||||||  |||||||||||||||||| |||||| ||| |||| ||||||    
T  13274833 ttgatgatgattcatggctttggtatgcatgattcatgttttgttgttgagaaatgagatgttgttggtagtttggtaaaa 13274753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 17223740 - 17223846
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| ||||||||||| ||||||||| ||||||||  || ||||| ||| || |||  |||||||||| || ||||| | ||||||||||||||||||||    
T  17223740 agggttagagagaagaagaacttgaa-aattcaagaattggaagagatcctacgaggtaaagtgaagcttgggctaagaattggtgataattaaggtaag 17223838  T
Q  106 ggggttag 113  Q
    ||||||||    
T  17223839 ggggttag 17223846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 1937198 - 1937290
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||  |||||||| || |||| |||||||||||||||||||| | || |||||||||||||  || |||| ||||||||||| ||||    
T  1937198 tagtcatattgttgatgatgatacatgacttgggtttgcatgattcataattttttgttgagaaatggattattgttggtggttttgtgaaat 1937290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 477
Target Start/End: Complemental strand, 12759029 - 12758965
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||| |||| ||||||  ||| |||||||||| |||||| ||||    
T  12759029 tgataattcatggcttgggtttgcaggatttatgatttgtgtggagaaatgagatgttgttggtg 12758965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 15822544 - 15822600
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||| ||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  15822544 tatgctcaaatggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 15822600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 48356686 - 48356602
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||| ||||||||||| | |||||||||||||||||||||    
T  48356686 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttggttttgtaaaatgggttga 48356602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 339
Target Start/End: Complemental strand, 371302 - 371203
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  371302 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 371203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Complemental strand, 3049627 - 3049565
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| |||||||||    
T  3049627 gatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgt 3049565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 16915119 - 16915217
Alignment:
Q  399 agtcatatgtttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||  ||| |||| ||||||||||||||| | ||| | |||||||| | ||  ||||| ||||||||||| | |||||||||||||||||||||    
T  16915119 agtcatattgttgttgatgattcatggcttgggtgttcataaatcatgatttgatgaagagaattgagttgttgttgttggttttgtaaaatgggttga 16915217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 7284173 - 7284229
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||| | | ||||||| |||||||||||| ||||||||||    
T  7284173 tatgcttaattggtgaattatcctttgttgttgttgaattgtgataagtttcatgat 7284229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 8563369 - 8563505
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||||||||||  || | ||||||||| ||| |||||||||| |||| |||||||| ||||||||| |||  ||||| |||  |||| | ||||||||||    
T  8563369 gatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaaattgcatgttcatgatatatataaatgagtatattgtgagttatgctcaa 8563468  T
Q  327 ttgg-tgaattatgcatggttgttgatgaattgtgat 362  Q
     ||| |||||| ||   |||||||| ||| |||||||    
T  8563469 atggatgaattgtgttaggttgttgttgatttgtgat 8563505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 12759121 - 12759065
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   ||||||| |||||| ||||| ||||||||||    
T  12759121 tatgctcaattggtgaattatgctatgttgttggtgaattatgataagtttcatgat 12759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 26070377 - 26070433
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||    |||||||||||||||||||| ||||||||||    
T  26070377 tatgcttaattggtgaattatgttatgttgttgatgaattgtgataagtttcatgat 26070433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 26094164 - 26094220
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||    |||||||||||||||||||| ||||||||||    
T  26094164 tatgcttaattggtgaattatgttatgttgttgatgaattgtgataagtttcatgat 26094220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 3895069 - 3894998
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| | |||||||||  |||| ||||||||| | ||||||    
T  3895069 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtaaaataagttgttgttgttggttt 3894998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 42056505 - 42056563
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  42056505 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 42056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 13377575 - 13377485
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    |||||||| ||||||||||||||| | ||| | |||||| ||| || |||||||| ||||||||| | |||||| || |||||||||||||    
T  13377575 ttgatgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaataagttgttgttgttggtttggtgaaaatgggttgat 13377485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 13389747 - 13389693
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttag 113  Q
    |||| |||||||||| || ||||  | ||||||||||||||||||||||||||||    
T  13389747 gagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 47289826 - 47289758
Alignment:
Q  410 tgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||| | |||||||||||||||  ||||| | |||||||||| |||||| ||||    
T  47289826 tgatgataattcatggcttgtg-ttgcatgattcatgattttgttatggagaaatgagatgttgttggtg 47289758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 2028965 - 2028893
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||| ||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  2028965 gatgctaattcatgacttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 2028893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 4446249 - 4446168
Alignment:
Q  418 attcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    ||||||||||||||| | ||| | |||||| ||| || || ||||||||||||||| | ||||||||| |||||||||||||    
T  4446249 attcatggcttgggtgttcataaatcatgaattgatgatgtgaaatgagttgttgttgttggttttgtaaaaatgggttgat 4446168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 12370050 - 12370127
Alignment:
Q  418 attcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    ||||||||||| ||| |||||||||||||| ||||| ||||||||| |||||| || | |||||| || |||||||||    
T  12370050 attcatggcttaggtatgcatgattcatgatttgttattgagaaataagttgtagttgttggtttggtgaaaatgggt 12370127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 14935400 - 14935319
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    |||||||| |||||| | ||| | |||||||| |||| |||||||| ||||||||| | ||||||||| |||||||||||||    
T  14935400 attcatggtttgggtgttcataaatcatgatttgttgatgagaaatcagttgttgttgttggttttgtaaaaatgggttgat 14935319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 497
Target Start/End: Complemental strand, 15362993 - 15362912
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    |||||||| |||||| | ||| | |||||||| |||| |||||||| ||||||||| | ||||||||| |||||||||||||    
T  15362993 attcatggtttgggtgttcataaatcatgatttgttgatgagaaatcagttgttgttgttggttttgtaaaaatgggttgat 15362912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 25124482 - 25124445
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||||||||||||||||| || ||||||||||||||||    
T  25124482 taaggtaagggggttagtcttcatcataatcatttagt 25124445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 143688 - 143622
Alignment:
Q  412 atgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| | |||||||||| |||||| ||||    
T  143688 atgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtg 143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 2190397 - 2190460
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||| | |||||||||    
T  2190397 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaagtaagttgttgt 2190460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 7293365 - 7293333
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  7293365 taaggtaagggggttagtctttatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 11516576 - 11516544
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  11516576 taaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 13758709 - 13758677
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  13758709 taaggtaagggggttagttattatcataatcat 13758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 14113903 - 14113935
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  14113903 taaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 15441478 - 15441510
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  15441478 taaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 15862258 - 15862226
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  15862258 taaggtaagggggttagttattatcataatcat 15862226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 15927907 - 15927875
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  15927907 taaggtaagggggttagttattatcataatcat 15927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 16212103 - 16212071
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  16212103 taaggtaagggggttagtctttatcataatcat 16212071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 18979938 - 18979970
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  18979938 taaggtaagggggttagttattatcataatcat 18979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 30262043 - 30262075
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  30262043 taaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 34241393 - 34241477
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| |||||||||||| || | ||| | |||||||| | || ||| |||||||||||||| | ||||||||||||| |||||||    
T  34241393 tgatgattcatggcttgagtgttcataaatcatgatttgatgatgaaaaatgagttgttgttgttggttttgtaaaaagggttga 34241477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 36053003 - 36052971
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  36053003 taaggtaagggggttagtctttatcataatcat 36052971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 44865270 - 44865204
Alignment:
Q  412 atgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| | |||||||||| |||||| ||||    
T  44865270 atgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtg 44865204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 322; Significance: 0; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 472
Target Start/End: Complemental strand, 80315 - 79846
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  80315 agaacaagggttagagagaagaggaacttgaagaattcaagggtttaaagaatcataggagcaaaagtgaagcttgagctaatagttggagataattaag 80216  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  80215 gtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 80116  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||| |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  80115 tttgaaatttgtgcttatgtggtagagatatgtttgaatatgttaatttgatgttaaataaattgttgatgatgaaattgcaagttcatgatgtatgaaa 80016  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                  |||    
T  80015 atgggtagtttgtaaattatgctcaattggtgaattatgcatgattgttgatgaattgtgatatgtttcatgattaatg---gttgttgttgttgtttag 79919  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| | ||||||||| ||||| |||||||||    
T  79918 tcatatggttgatgataattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgt 79846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 46299 - 46238
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||   ||||||| | |||||||||| |||||||||| ||||    
T  46299 tatgctcaattggtgaattatgctatgttgttgttaaattgtgataagtttcatgatcaatg 46238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 5682332 - 5682706
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5682332 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcatgagctaatagttggtgataattaag 5682431  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5682432 gtaagtgggttagtttttatcataatcatttagttaatt-ttttcctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 5682530  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5682531 tttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 5682630  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatta 376  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5682631 ttgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatta 5682706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 12 - 489
Target Start/End: Original strand, 25119022 - 25119498
Alignment:
Q  12 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||| |||    
T  25119022 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggagtt 25119121  T
Q  112 agtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcg 211  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||   ||||||    
T  25119122 agtttttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatcttgaaaattcg 25119221  T
Q  212 tgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagttt 311  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25119222 tgcttatgtggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatggatagttt 25119321  T
Q  312 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttg 411  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||                  |||||||||  |||    
T  25119322 gtaaattatgatcaattggtgaattatgcatggtttttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttagtcatattgttg 25119418  T
Q  412 atgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    || || || ||||||||||||||||||||||||| |  ||||||||||||||||  ||||||| ||||||||||| ||||    
T  25119419 ataatgatacatggcttgggtttgcatgattcataattttgttgttgagaaatggattgttgttggtggttttgtgaaat 25119498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 97 - 502
Target Start/End: Complemental strand, 14952117 - 14951713
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  14952117 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 14952018  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14952017 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 14951918  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnn 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                     
T  14951917 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttat 14951821  T
Q  397 ntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggtt 494  Q
     |||||||||  |||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| || ||||||||||    
T  14951820 ttagtcatattgttgatgatgatatatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaaatgggtt 14951721  T
Q  495 gataatga 502  Q
    ||| ||||    
T  14951720 gattatga 14951713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 15272211 - 15272489
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  15272211 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 15272310  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  15272311 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaacgaatggttgatgatgaaattgcaagttcatgatgta 15272410  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15272411 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgttccatgat 15272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 93 - 328
Target Start/End: Complemental strand, 19559719 - 19559483
Alignment:
Q  93 taattaaggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| ||||||||||||||| ||| |  |||||||| ||||||||||  || |||||| |||||| ||||| || ||||  |||||||||| ||| |||    
T  19559719 taattgaggtaagggggttagatttcaagcataatcaattagttaatttcttctctctttttctatgcataagtgcttatttgaataagtgattattatg 19559620  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
     ||||||  |||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  19559619 tacccaacttttgaaattcctgctcatgttgtagtgatatgtttgagcatgttaatttgatgttaattgaattgttgatgatgaaattgcatgttcatga 19559520  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaatt 328  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  19559519 tgtatgtaaatgggtagtttgtgaattatgctcaatt 19559483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 54118078 - 54118200
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagg 106  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  54118078 agggttagagagaagagaaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagg 54118177  T
Q  107 gggttagtttttatcataatcat 129  Q
    |||||||| || |||||||||||    
T  54118178 gggttagtcttcatcataatcat 54118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 15135907 - 15136010
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  15135907 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 15136006  T
Q  196 caat 199  Q
    ||||    
T  15136007 caat 15136010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 174 - 339
Target Start/End: Original strand, 34177617 - 34177781
Alignment:
Q  174 gaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgat 273  Q
    |||||||||| |||  |||| ||||||||   |||||||||| ||||||||| |||||||||||  |||||||||  ||| ||| |||||||||||||||    
T  34177617 gaataagtgattattgtgaatccaatcttgaaaattcgtgctcatgttgtagtgatatgtttgagtatgttaattacatgataattgaattgttgatgat 34177716  T
Q  274 caaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
     |||||||| |||||||||||||  |||||||||| |||  ||||||| |||||||||||||||||    
T  34177717 aaaattgcatgttcatgatgtatataaatgggtag-ttgagaattatgttcaattggtgaattatg 34177781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 422 - 524
Target Start/End: Complemental strand, 16522851 - 16522748
Alignment:
Q  422 atggcttgggtttgcatgattcatgattgttgttgag-aaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatg 520  Q
    ||||||||||| | |||   ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||    
T  16522851 atggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtggttttgtaaaatgggttgataaagaagaagtttgattttgatg 16522752  T
Q  521 atgt 524  Q
    ||||    
T  16522751 atgt 16522748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 145 - 339
Target Start/End: Complemental strand, 49071994 - 49071800
Alignment:
Q  145 tctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgtt 244  Q
    |||||| |||||| ||||| || ||||  ||||||||||  ||  ||||||||| | ||| |||||||||| || |||||| |||||||||||  |||||    
T  49071994 tctctttttctatgcataagtgcttatttgaataagtgatcattgtgaacccaaccgttgaaattcgtgctcatattgtagtgatatgtttgagtatgtt 49071895  T
Q  245 aatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||||||||||| |||||| |||||||| |||||||| ||||||||| |||| | |||  || ||  | || |||||||||||| |||||||||    
T  49071894 aatttgatgttaattgaattattgatgatgaaattgcatgttcatgatatatgtatatgaatacttgatgaaatatgctcaattgatgaattatg 49071800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 53704846 - 53704902
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53704846 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 53704902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 422 - 524
Target Start/End: Complemental strand, 9295727 - 9295624
Alignment:
Q  422 atggcttgggtttgcatgattcatgattgttgttgag-aaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatg 520  Q
    ||||||||||| | |||   ||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||||||||| |||||||    
T  9295727 atggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtggttatgtaaaatgagttgataaagaagaagtttgattttgatg 9295628  T
Q  521 atgt 524  Q
    ||||    
T  9295627 atgt 9295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 339
Target Start/End: Original strand, 14500208 - 14500358
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | |||| ||||||  |||||||||| ||| |||||||||| ||| |||| ||||  || |||||    
T  14500208 atgaacccaatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaatttaatgataaatgaattattggtgatgaaataacatgttca 14500307  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    | ||||||||||||||||||||   |||||||||| ||||| |||||||||    
T  14500308 taatgtatgaaaatgggtagttgtgaaattatgcttaattgatgaattatg 14500358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 16732215 - 16732146
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  16732215 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtg 16732146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 34395303 - 34395222
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  34395303 ttgatgataattcatggcttgagtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 34395222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 34395418 - 34395335
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  34395418 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 34395335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 502
Target Start/End: Original strand, 55376798 - 55376893
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatga 502  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |||  | ||||||||||||| ||||    
T  55376798 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgatgttggtgttttgatgaaaatgggttgattatga 55376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 44055961 - 44055892
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  44055961 ttgatgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 44055892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 820029 - 820085
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  820029 tatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 820085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 8872584 - 8872640
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  8872584 tatgctcaattggtgaattatgcgttgttgttgatgaattgtgatatgtttcatgat 8872640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 18494529 - 18494602
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  18494529 ttgatggtaactcatggcttgggtatgcatgattcatgacttgttgttgagaaatgagatgttgttggtggttt 18494602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 23270135 - 23270204
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||| |||||| ||||    
T  23270135 ttgatgataattcatggcttgggtttgcatgattcatggtttgtggttgagaaatgagatgttgttggtg 23270204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 472
Target Start/End: Original strand, 13809711 - 13809775
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgt 472  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||    
T  13809711 ttgatgataattcatggcttggatatgcatgattcatgattggttgttgagaaatgagatgttgt 13809775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 30458037 - 30457981
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  30458037 tatgctcaattggtgaattacgcattgttgttgatgaattgtgataagtttcatgat 30457981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 37957230 - 37957314
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||| ||||||||| ||||| |||||||||| |||| ||| |||||||||||||| ||||  |||||||||||||||||    
T  37957230 tgataattcacggcttgggtgtgcataattcatgatttgttgatgataaatgagttgttgttggtgactttgtaaaatgggttga 37957314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 44056049 - 44055989
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaat 378  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||    
T  44056049 tatgctcaattggtgaattatgcattattgttgatgaattgtgataagtttcatgatcaat 44055989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 44346961 - 44346905
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  44346961 tatgctcaattggtgaattatacattgttgttcatgaattgtgatatgtttcatgat 44346905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 53907812 - 53907868
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  53907812 tatgcccaattggtgaattatgcattgttgttgatgaattgtgaaatgtttcatgat 53907868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 489
Target Start/End: Original strand, 5682728 - 5682817
Alignment:
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||  |||||||| ||  ||| |||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||| ||||    
T  5682728 tcatattgttgatgatgatatatgtcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 5682817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 53704934 - 53705003
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  53704934 ttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 53705003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 53907897 - 53907966
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  53907897 ttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 53907966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 16732303 - 16732243
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaat 378  Q
    |||||||||||||||||||||||   |||||||||||||||||||| |||||||||| |||    
T  16732303 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgatcaat 16732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 21959576 - 21959632
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  21959576 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 21959632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 55376714 - 55376766
Alignment:
Q  322 ctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  55376714 ctcaattggtgaattatacattgttgttgatgaattgtgataagtttcatgat 55376766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 524
Target Start/End: Original strand, 7186049 - 7186159
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatgaagaagttt 510  Q
    |||| ||||||||||||||| |  || | |||||||| | || ||||| ||||||||||||   || |||||| ||||||||||||||||||||||||||    
T  7186049 tgatgattcatggcttgggtgtttataaatcatgatttgatgatgagatatgagttgttgt---tgtttttgtgaaaatgggttgataatgaagaagttt 7186145  T
Q  511 gaatttgatgatgt 524  Q
    || |||||||||||    
T  7186146 gattttgatgatgt 7186159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 23270020 - 23270103
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||| |||||||| |||||||||||| |||||||||||||||||||| || |||||||    
T  23270020 tgtatgaaaatgggtatgtgttgaaaatatactcaattgatgaattatgcattgttgttgatgaattgtgataagtatcatgat 23270103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 44346873 - 44346816
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgag 465  Q
    |||||||||||||||||||||||||||||| |||| | | ||||||||||||||||||    
T  44346873 ttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgag 44346816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 7964916 - 7965000
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| |||||||||||| || | ||| | |||||||| | || |||||||||||||||||| | |||||||||||||||||||||    
T  7964916 tgatgattcatggcttgagtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaatgggttga 7965000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 14996353 - 14996241
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||| ||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||    
T  14996353 gataagtttgagtatgttaattgaatgataaaagaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaa 14996254  T
Q  327 ttggtgaattatg 339  Q
    ||| |||||||||    
T  14996253 ttgatgaattatg 14996241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 16523044 - 16522932
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||    
T  16523044 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaa 16522945  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  16522944 ttgatgacttatg 16522932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 19821981 - 19822065
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||| | ||||  ||||||||||| |||||    
T  19821981 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgtttttggtgactttgtaaaatgagttga 19822065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 12837403 - 12837464
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||    
T  12837403 gatgttaattcatggcttgggtatgcatgattcatgatttgttg-tgagaaataagttgttgt 12837464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 21417541 - 21417471
Alignment:
Q  218 tgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||| |||||||||||||||| |||| |||||| || ||| ||||||||||||||| ||||| || |||||    
T  21417541 tgttttagagatatgtttgaatatgtgaatttgttgataattgaattgttgatgatgaaatttcatgttca 21417471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 462
Target Start/End: Original strand, 21959664 - 21959718
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaat 462  Q
    ||||||||||||||||||||||| ||||||||||||| | |||| ||||||||||    
T  21959664 ttgatgataattcatggcttgggcttgcatgattcatagtttgtggttgagaaat 21959718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 471
Target Start/End: Original strand, 820114 - 820177
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttg 471  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| | |||||||||| |||||    
T  820114 ttgatgataattcatggcttggg-ttgcatgattcatgattttgttatggagaaatgagatgttg 820177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 489
Target Start/End: Complemental strand, 14901274 - 14901197
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||| | ||||| ||||| |||||||| ||| || ||||||||| |||||||| ||||||||||||||||    
T  14901274 tgatgattcatgacatgggtgtgcataattcatgaattgatgatgagaaatgggttgttgttggtggttttgtaaaat 14901197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 30232609 - 30232670
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||   ||||||| | |||||||||| |||||||||| ||||    
T  30232609 tatgctcaattggtgaattatgctatgttgttgttaaattgtgataagtttcatgatcaatg 30232670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 310
Target Start/End: Original strand, 32460699 - 32460820
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | |  |||  |||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  32460699 atgaacccaatctttgaatttcgtgctcttgttttggttataattttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 32460798  T
Q  289 tgatgtatgaaaatgggtagtt 310  Q
    | ||||||||||| ||||||||    
T  32460799 taatgtatgaaaaggggtagtt 32460820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 47535251 - 47535328
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| |||||||||||| || | ||| |||||||||| |||  |||||||||||||||||| | ||||||||||||||    
T  47535251 tgatgattcatggcttgagtgttcataattcatgatttgttaatgagaaatgagttgttgttgatggttttgtaaaat 47535328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 8045170 - 8045058
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||| ||||||| |||   |||||||||| ||    
T  8045170 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgagaatgggttgttgtgaaattatgcttaa 8045071  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  8045070 ttgatgacttatg 8045058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 9295920 - 9295808
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| | || ||||  || |||||| |||||||||||||||| |||   |||||||||| ||    
T  9295920 gataagtttgagtatgttaattgaatgataaatgaattgttggtaatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaa 9295821  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  9295820 ttgatgacttatg 9295808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 27961017 - 27960938
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    ||||||||||||||||| |||||| ||||||||| |||| || ||||||||||||||| | |||| ||| |||| ||||||    
T  27961017 ttgatgataattcatggtttgggtatgcatgatt-atgatttattgttgagaaatgagatattgttggtagtttggtaaaa 27960938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 41165811 - 41165883
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcattt 131  Q
    |||| |||||||||| || ||||  | |||||||||||||| |||||||||||||  || |||||||||||||    
T  41165811 gagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttagaattcatcataatcattt 41165883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 45459056 - 45459096
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt 449  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  45459056 ttgaagataatccatggcttgggtttgcatgattcatgatt 45459096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 12133623 - 12133686
Alignment:
Q  219 gttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgca 282  Q
    ||||||| ||||||||||   ||||||||||| |||||| ||||||||| ||||| ||||||||    
T  12133623 gttgtagtgatatgtttgggtatgttaatttgttgttaattgaattgttaatgatgaaattgca 12133686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 15272528 - 15272586
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  15272528 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 15272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 16225211 - 16225301
Alignment:
Q  245 aatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
    ||||||||| ||  |||||||||| || | ||||| || ||||||||  |||  ||||||||||||||| ||||||||||||||| ||||||    
T  16225211 aatttgatggtatttgaattgttgttgtttaaattacatgttcatgaa-tatataaatgggtagtttgtgaattatgctcaattgatgaatt 16225301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 45458968 - 45459023
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatga 373  Q
    |||| |||||||||||||||||| | | ||||| |||||||||||| |||||||||    
T  45458968 tatgttcaattggtgaattatgctttgctgttgttgaattgtgataagtttcatga 45459023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 12837313 - 12837367
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatg 372  Q
    |||||||||||||||||||||||   ||||||| | |||||||||| ||||||||    
T  12837313 tatgctcaattggtgaattatgctatgttgttgttaaattgtgataagtttcatg 12837367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 30232699 - 30232761
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| ||||| |||||| | ||||||||| ||||| |||||||||    
T  30232699 gatgttaattcatggcttgggtatgcattattcataatttgttgttgtgaaataagttgttgt 30232761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 489
Target Start/End: Original strand, 41166158 - 41166228
Alignment:
Q  420 tcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||||||||| | ||| | | |||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  41166158 tcatggcttgggtattcataacttatgatttgttgatgagaaatgagttgttgtgggtggttttgtgaaat 41166228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 9795463 - 9795330
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||| ||| |||| ||||  || |||||| |||| | |||||| |    
T  9795463 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattcttggtgatgaaataacatgttcataatgtgtcaaaatgag 9795364  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||   |||||||| | |||||||||||||||    
T  9795363 tagttgtgaaattatgtttaattggtgaattatg 9795330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 14996478 - 14996445
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||||| |||||||||||||    
T  14996478 ttaaggtaagggggttagttattatcataatcat 14996445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 477
Target Start/End: Complemental strand, 30457959 - 30457880
Alignment:
Q  399 agtcatatgtttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||| || ||||||||||||||||||||||| |||||| |||||| |  ||||| | |||||||||| |||||| ||||    
T  30457959 agtcatgtggttgatgataattcatggcttggg-ttgcataattcattattttgttatagagaaatgagatgttgttggtg 30457880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 7131982 - 7132014
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  7131982 taaggtaagggggttagttattatcataatcat 7132014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 13246769 - 13246737
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  13246769 taaggtaagggggttagtctttatcataatcat 13246737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 15287162 - 15287194
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  15287162 taaggtaagggggttagttattatcataatcat 15287194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 15294271 - 15294303
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  15294271 taaggtaagggggttagttattatcataatcat 15294303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 16327840 - 16327872
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 16609013 - 16609045
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  16609013 taaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 17145574 - 17145606
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  17145574 taaggtaagggggttagttattatcataatcat 17145606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 20001062 - 20001030
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  20001062 taaggtaagggggttagttattatcataatcat 20001030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 26680549 - 26680517
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  26680549 taaggtaagggggttagtctttatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 12 - 489
Target Start/End: Original strand, 31095 - 31570
Alignment:
Q  12 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  31095 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggtt 31194  T
Q  112 agtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcg 211  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31195 agtttttatcacaatcatttagttaattcattttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcg 31294  T
Q  212 tgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagttt 311  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31295 tgcttatgttgtagacatgtgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagttt 31394  T
Q  312 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||||||||  |||    
T  31395 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttagtcatattgttg 31491  T
Q  412 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||| || |||||||| |||||||||||||||| | ||||||||||||||||  ||||||| ||||||||||| ||||    
T  31492 atgatgatacatggcttaggtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgtgaaat 31570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 316; Significance: 1e-178; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 12 - 489
Target Start/End: Complemental strand, 41749 - 41274
Alignment:
Q  12 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  41749 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggtt 41650  T
Q  112 agtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcg 211  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  41649 agtttttatcacaatcatttagttaattcattttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcg 41550  T
Q  212 tgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagttt 311  Q
    ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41549 tgcttatgttgtagacatgtgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagttt 41450  T
Q  312 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttg 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                  |||||||||  |||    
T  41449 gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttagtcatattgttg 41353  T
Q  412 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||| || |||||||| |||||||||||||||| | ||||||||||||||||  ||||||| ||||||||||| ||||    
T  41352 atgatgatacatggcttaggtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgtgaaat 41274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 36980 - 37012
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  36980 taaggtaagggggttagtctttatcataatcat 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 307; Significance: 1e-173; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 21860462 - 21860084
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  21860462 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 21860363  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  21860362 gtaagggggttagtttttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatc 21860263  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  21860262 tttgaaattcgtacttatgtggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttaatgatgaaattgcaagttcatgatgaatgaaa 21860163  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21860162 atgagtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 21860084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 44034775 - 44035153
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||||    
T  44034775 agaacaagggttagagagaagaggaacttgaagaattcaagagtttgaagaattataggagcaaaagtgaagctagagctaatagttggagataattaag 44034874  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  44034875 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 44034974  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||| || |||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  44034975 tttgaaattcttgtttatgttgtagatatatgtttgaatatgttaatttgatgtttaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 44035074  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44035075 atgggtagtttgtaaattatgctcatttggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg 44035153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 98 - 502
Target Start/End: Original strand, 15861327 - 15861728
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  15861327 aaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccca 15861426  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15861427 atctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 15861526  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  15861527 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg-----gttgttgtttgtt 15861621  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttg 495  Q
    |||||||||  |||||||| || |||| |||||||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| || |||||||||||    
T  15861622 tagtcatattgttgatgatgatgcatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgttttggtgaaaatgggttg 15861721  T
Q  496 ataatga 502  Q
    || ||||    
T  15861722 attatga 15861728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 174 - 502
Target Start/End: Complemental strand, 22367296 - 22366970
Alignment:
Q  174 gaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgat 273  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22367296 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgat 22367197  T
Q  274 caaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatga 373  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22367196 gaaattgcaagttcatgatgtatgaaaatgagtagtttgtaaattatgctcaattggtgaa-tatgcatggttgttgatgaattgtgatatgtttcatga 22367098  T
Q  374 ttaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    | ||||                  |||||||||  |||||||| || |||| |||||||||||||||||||||| ||||||||||||||||  |||||||    
T  22367097 tcaatg---gttgttgttgttgtttagtcatattgttgatgatgatacatgacttgggtttgcatgattcatgatttgttgttgagaaatggattgttgt 22367001  T
Q  473 cggtggttttgt-aaaatgggttgataatga 502  Q
     |||| ||| || ||||||||||||| ||||    
T  22367000 tggtgttttggtgaaaatgggttgattatga 22366970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 41218856 - 41218674
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  41218856 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaag 41218757  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtga 183  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  41218756 gtaagggggttagttttcatcatgatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtga 41218674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 41394649 - 41394527
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagg 106  Q
    |||| |||||||| ||||| ||||||||||||||||||||| ||||||||| |||| ||||||||||  |||||||||||||| ||||||||||||||||    
T  41394649 agggttagagagaggaggagcttgaagaattcaagggtttggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaagg 41394550  T
Q  107 gggttagtttttatcataatcat 129  Q
    |||||||| ||||||||||||||    
T  41394549 gggttagtctttatcataatcat 41394527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 27674838 - 27674755
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||||||||||| ||||| |||||||||| ||| |||||||||||||||||| ||||  |||||||||||||||||    
T  27674838 tgataattcatggcttgggtgtgcataattcatgatttttgatgagaaatgagttgttgttggtgactttgtaaaatgggttga 27674755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 22403196 - 22403282
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaa 377  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22403196 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgattaa 22403282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 21718274 - 21718206
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||    
T  21718274 ttgatgataattcatggcttgggtttgcatgattcatggttgttcttgagaaatgagatgttgttggtg 21718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 35522520 - 35522588
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  35522520 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 35522588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 51627865 - 51627945
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||| |||||||| ||||||    
T  51627865 ttgatgataattcatggcttgggtatgcatgattcatgatttgctgttgagaaatgagatgttgttggtggtttggtaaaa 51627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 413 - 495
Target Start/End: Original strand, 22829629 - 22829712
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttg 495  Q
    |||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||| ||||  ||||||||||||||||    
T  22829629 tgataattcatggcttgggtgtgcataattcatgatttgttgatgagaaatgagttgttgttggtgactttgtaaaatgggttg 22829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 477
Target Start/End: Complemental strand, 41212206 - 41212046
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgata 417  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||                   ||||||| |  |||||||||    
T  41212206 tatgctcaattagtgaattatgcactgttgttgatgaattgtgatatgtttcatgatcaattgttgttgttgttgttgtttagtcatgttgttgatgata 41212107  T
Q  418 attcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  41212106 attcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 41212046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 19603139 - 19603055
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||| ||||||| || || |||||||||| |||| |||||||||||||||||| ||||  |||||||||||||||||    
T  19603139 tgataattcatgacttgggtgtgaataattcatgatttgttgatgagaaatgagttgttgttggtgactttgtaaaatgggttga 19603055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 38033882 - 38033962
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||||| |||||  |||| |||||||| |||||||| ||||||||| ||||  |||||||||||||||||    
T  38033882 taattcatggcttgggtgtgcatagttcacgattgttgatgagaaataagttgttgttggtgactttgtaaaatgggttga 38033962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 49967696 - 49967628
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||| |||||| ||||    
T  49967696 ttgatgataattcattgcttcggtttgcatgattcatggttgttgttgaggaatgagatgttgttggtg 49967628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 49967784 - 49967728
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  49967784 tatgctcaattggtgaattatacattgttgttgatgaattgtgatacgtttcatgat 49967728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 21860068 - 21859984
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||  |||||||| || ||||||| ||||||||||||||||| | ||||||||||||||||| ||||||| | ||||||    
T  21860068 tagtcatattgttgatgatgatacatggctcgggtttgcatgattcataatttgttgttgagaaatgaattgttgttgttggttt 21859984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 35522432 - 35522488
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  35522432 tatgctcaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 35522488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 20177221 - 20177140
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||| ||||||||||||| | | ||| |||||||||| ||||  ||||||||||||||||| ||||||||||| ||||    
T  20177221 ttgatgatgattcatggcttggatattcataattcatgatttgttgaagagaaatgagttgttgttggtggttttgtgaaat 20177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 21718362 - 21718306
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   ||||||||||| |||||||| ||||||||||    
T  21718362 tatgctcaattggtgaattatgctatgttgttgatgatttgtgataagtttcatgat 21718306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 21650082 - 21650181
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  21650082 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 21650181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 484
Target Start/End: Original strand, 44035169 - 44035255
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgt 484  Q
    |||||||||  |||||||| ||  |||||||| ||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||||    
T  44035169 tagtcatatagttgatgatgata-atggcttgagtttgcatgattcataatttgttgttgagaaatggattgttgttggtggttttgt 44035255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 472
Target Start/End: Original strand, 22403311 - 22403375
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||| | |||||||||| ||||||    
T  22403311 ttgatgataattcatggcttgggttt-catgattcatgattttgttatggagaaatgagatgttgt 22403375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 20254539 - 20254430
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| ||||||||||||| || |||   |||||||||| ||    
T  20254539 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgagttgttatgaaattatgcttaa 20254440  T
Q  327 ttggtgaatt 336  Q
    ||| ||||||    
T  20254439 ttgatgaatt 20254430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 27329868 - 27329929
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||   ||||||| | |||||||||| |||||||||| ||||    
T  27329868 tatgctcaattggtgaattatgctatgttgttgttaaattgtgataagtttcatgatcaatg 27329929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 35054890 - 35054829
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||   || ||||||||| ||||||| |||||||||| ||||    
T  35054890 tatgctcaattggtgaattatgctatgtagttgatgaactgtgataagtttcatgatcaatg 35054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 9784301 - 9784341
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt 449  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  9784301 ttgatgatcattcatggcttgggcttgcatgattcatgatt 9784341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 20955644 - 20955728
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||||||| ||| || || |||| ||| |||||| || ||||||||||||||| ||||  ||||||||| |||||||    
T  20955644 tgataattcatggcttcggtgtgaataattcgtgaattgttggtgtgaaatgagttgttgtgggtgactttgtaaaaggggttga 20955728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 27675188 - 27675120
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatc 127  Q
    |||| |||||||||| || ||||  | |||| |||||||||||||||||||||||  ||||||||||||    
T  27675188 gagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatc 27675120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 493
Target Start/End: Complemental strand, 35054800 - 35054716
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| | ||| ||||||||| | |||||| || |||||||||    
T  35054800 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtggaataagttgttgttgttggtttggtgaaaatgggt 35054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 20177619 - 20177513
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| ||||||||||| || |||||||| ||||||  || ||||| ||| || |||| |||||||||| || ||||  | |||||||||||||||||||     
T  20177619 agggttagagagaagaagagcttgaaga-ttcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaat 20177521  T
Q  106 ggggttag 113  Q
    ||||||||    
T  20177520 ggggttag 20177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 13377041 - 13377122
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||| | |||||||||||| || | ||| |||||||| |||||| |||||||||| ||||||| || |||||||| ||||    
T  13377041 ttgatgttgattcatggcttgagtattcataattcatgatttgttgatgagaaatgaattgttgttggcggttttgtgaaat 13377122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 45051759 - 45051726
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| ||||||||||||||    
T  45051759 ttaaggtaagggggttagtctttatcataatcat 45051726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 17608970 - 17608886
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | |  |||||| ||||||||||| | |||||||| ||||||||||||    
T  17608970 tgatgattcatggcttgggtgttcataaatcatgatttgattatgagaattgagttgttgttgttggttttggaaaatgggttga 17608886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 488
Target Start/End: Complemental strand, 21195056 - 21194980
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||||||||||||||| | ||||||| |||||    
T  21195056 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttataaaa 21194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 37844374 - 37844406
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  37844374 taaggtaagggggttagtctttatcataatcat 37844406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 41229149 - 41229221
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||||| || | ||| |||||||||| || | |||||||||||||||||| ||| |||| |||||||    
T  41229149 attcatggcttgagtgttcataattcatgatttgtggatgagaaatgagttgttgttggtagtttggtaaaat 41229221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 46523727 - 46523695
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  46523727 taaggtaagggggttagttattatcataatcat 46523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 24716666 - 24717152
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  24716666 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggtgataattaag 24716765  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||    
T  24716766 gtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccgatc 24716865  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||||||| |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  24716866 tttgaaattcgtggttatatggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgataatgaaattgcaagttcacgatgtatgaaa 24716965  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntag 400  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||                  |||    
T  24716966 atggatagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatttgtttcatgttcaatg---gttgttgttgatgtttag 24717062  T
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||  |||||||| || ||||||||||||||||||||||||| | |||||||||| |||||  ||||||| ||||||||||||||||    
T  24717063 tcatattgttgatgatgatacatggcttgggtttgcatgattcataatttgttgttgataaatggattgttgttggtggttttgtaaaat 24717152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 15 - 379
Target Start/End: Complemental strand, 39115712 - 39115348
Alignment:
Q  15 agagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagt 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  39115712 agagaagagaaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagctaatagttggtaataattaaggtaagggtgttagt 39115613  T
Q  115 ttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgc 214  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||    
T  39115612 tttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaacccaatctttgacattcgtgc 39115513  T
Q  215 ttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgta 314  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  39115512 ttatgttgtaaagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtaatttgta 39115413  T
Q  315 aattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  39115412 aattatgctcaattggtgaattatgcatagttgttgatgaatcgtgatatgtttcatgatcaatg 39115348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 274894 - 274521
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  274894 agaacaagggttagagagaagaggaacttgaagaattcaaatgtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 274795  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  274794 gtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaacccaatc 274695  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  274694 tttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 274595  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  274594 atgtgtagtttgtaaattatgttcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 274521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 640955 - 641328
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  640955 agaacaagggttagagagaagaggaacttgaagaattcaaatgtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 641054  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  641055 gtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaacccaatc 641154  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  641155 tttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 641254  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  641255 atgtgtagtttgtaaattatgttcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 641328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 374
Target Start/End: Original strand, 826761 - 827134
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  826761 agaacaagggttagagagaagaggaacttgaagaattcaaatgtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 826860  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  826861 gtaagggggttagtttttatcataatcatttagttaatccattttctcttgtcctatgcataattgattatgagaataagttattatcatgaacccaatc 826960  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  826961 tttgaaattcgtgcgtatgtggtagagatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 827060  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  827061 atgtgtagtttgtaaattatgttcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 827134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 97 - 481
Target Start/End: Original strand, 41506709 - 41507091
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  41506709 taaggtaagggggttagttttcatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 41506808  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41506809 aatctttgaaatccgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 41506908  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnn 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                     
T  41506909 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgt 41507005  T
Q  397 ntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
     |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  41507006 ttagtcatattgttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 41507091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 97 - 359
Target Start/End: Original strand, 24385652 - 24385914
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  24385652 taaggtaagggggttagtctttatcataatcatttagttaattccttttctcttgttctatgcataattgattatgagaataagtgattattatgaaccc 24385751  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24385752 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgataatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 24385851  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgt 359  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  24385852 gaaaatgggtagtttgtaaattatgctcaattggtgaattaagcattgttgttgatgaattgt 24385914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 188 - 338
Target Start/End: Original strand, 22321437 - 22321587
Alignment:
Q  188 catgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttc 287  Q
    ||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  22321437 catgaacccaatctttgaaattcgtgctcaggttgtagagatatgtttgaatatgttaatttgatgttaattgaattgttgatgatgaaattgcaagttc 22321536  T
Q  288 atgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattat 338  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22321537 atgacgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattat 22321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 240 - 374
Target Start/End: Original strand, 16038924 - 16039058
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16038924 atgttaattgaatgataaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattagtgaattatg 16039023  T
Q  340 catggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||| ||||||||||    
T  16039024 catggttgttgatgaattgtgataagtttcatgat 16039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 97 - 336
Target Start/End: Original strand, 21259391 - 21259630
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||  || |||||||||| ||||||||||  |  |||||| |||||| ||||| || ||||  |||||||||| |||  |||||||    
T  21259391 taaggtaagggggttagaattcatcataatcacttagttaatttctactctctttttctatgcataagtgcttatttgaataagtgattattgtgaaccc 21259490  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    ||  |||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| |||||| |||||||| |||||||| |||||||||||||    
T  21259491 aacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtat 21259590  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
      ||||||||||||||| |||| |||||||||| ||||||    
T  21259591 ataaatgggtagtttgtgaattgtgctcaattgatgaatt 21259630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 93 - 339
Target Start/End: Complemental strand, 17502521 - 17502274
Alignment:
Q  93 taattaaggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| || |||||||||||| ||| |  |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  |||||||||| ||| |||    
T  17502521 taattgagataagggggttagatttcaagcataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattatg 17502422  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
    ||||||||||||| |||| ||||| ||||||||| |||||||||||  |||||||||||||| | | ||||||||| ||||| |||||||| ||||||||    
T  17502421 aacccaatctttgaaatttgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttcatga 17502322  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||  ||| ||||||||||| ||||||| ||||||| |||||||||    
T  17502321 tgtatataaaagggtagtttgtgaattatgttcaattgatgaattatg 17502274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16404804 - 16404932
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  16404804 agaacaagggttagagagaataggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 16404903  T
Q  101 gtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||| || |||||||||||    
T  16404904 gtaagggggttagtcttcatcataatcat 16404932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 121 - 339
Target Start/End: Complemental strand, 23218208 - 23217990
Alignment:
Q  121 cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgt 220  Q
    |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  |||||||||| |||  |||||||||  |||| |||||||||||||||    
T  23218208 cataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattgtgaacccaacttttgaaattcgtgcttatgt 23218109  T
Q  221 tgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattat 320  Q
     |||| |||||||||||  |||||||||||||| | | ||||||||| ||||| |||||||| ||| |||||||||  |||||| |||||||| ||||||    
T  23218108 ggtagtgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttaatgatgtatataaatggctagtttgtgaattat 23218009  T
Q  321 gctcaattggtgaattatg 339  Q
    | ||||||| |||||||||    
T  23218008 gttcaattgatgaattatg 23217990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 145 - 339
Target Start/End: Complemental strand, 4234162 - 4233968
Alignment:
Q  145 tctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgtt 244  Q
    |||||| |||||| ||||| || ||||  |||||||||| |||  ||||||||||||||| |||| ||||| |||||| || |||||||||||  |||||    
T  4234162 tctctttttctatgcataagtgcttatttgaataagtgattattgtgaacccaatctttgaaatttgtgctcatgttgcagtgatatgtttgagtatgtt 4234063  T
Q  245 aatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||||||| | | ||||||||| ||||| |||||||| ||| |||||||||  ||||||||||||||| ||||||  ||||||| |||||||||    
T  4234062 aatttgatgatgattgaattgttaatgatgaaattgcatgtttatgatgtatataaatgggtagtttgtgaattattttcaattgatgaattatg 4233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 22234890 - 22234972
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22234890 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 22234972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 20567200 - 20567268
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  20567200 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 20567268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 20567359 - 20567427
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  20567359 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 20567427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 20573393 - 20573461
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  20573393 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 20573461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 20573552 - 20573620
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  20573552 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgagaaatgagatgttgttggtg 20573620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 38533695 - 38533607
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||| |||||| || |  |||||||||||||||||    
T  38533695 ttgatgataattcatggcttgggtgtgcataattcatgatttgttgatgagaaatgagatgttgttggagactttgtaaaatgggttga 38533607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 22736046 - 22736127
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||| |||||||||||||| ||||  |||||||||||||||||    
T  22736046 taattcatggcttgggtgtgcataattcatgaattgttgatgaaaaatgagttgttgttggtgactttgtaaaatgggttga 22736127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 41246704 - 41246635
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  |||||| ||||    
T  41246704 ttgatgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgaaatgttgttggtg 41246635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 19993141 - 19993212
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgata 363  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  19993141 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgata 19993212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 41246792 - 41246736
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41246792 tatgcttaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 41246736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 37611829 - 37611746
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||    
T  37611829 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgctttgttgttgatgaattgtgaaaagtttcatgat 37611746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 502
Target Start/End: Complemental strand, 29759999 - 29759893
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttg 495  Q
    |||||||||  |||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||  ||||||| |||| ||| ||  ||||||||||    
T  29759999 tagtcatattgttgatgatgatatatggcttgggtttgcatgattcatgatttgttgttgagaaatggtttgttgttggtgttttggtgtaaatgggttg 29759900  T
Q  496 ataatga 502  Q
    || ||||    
T  29759899 attatga 29759893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 19993255 - 19993324
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||| |||||| ||||    
T  19993255 ttgatgataattcatggctagggtttgcataattcttggattgttgttgagaaatgagatgttgttggtg 19993324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 31194128 - 31194251
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaat-agttggtgataattaaggtaag 105  Q
    |||| ||||||||||| |||||||| || ||||| | |||||||||||||| ||||||||||||||| | ||||| | | ||  |  ||| |||||||||    
T  31194128 agggttagagagaagaagaacttgagga-ttcaaagatttgaagaatcataggagcaaaagtgaagcttaagctagtgaattaat-ctaactaaggtaag 31194225  T
Q  106 ggggttagtttttatcataatcattt 131  Q
    |||||||||||| |||||||||||||    
T  31194226 ggggttagttttcatcataatcattt 31194251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 477
Target Start/End: Complemental strand, 15969860 - 15969796
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||| ||||| |||||||||||| |  ||||||||||||||||| ||||    
T  15969860 tgataattcatggcttgggtgtgcataattcatgattgtagaggagaaatgagttgttgttggtg 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 329
Target Start/End: Original strand, 21494452 - 21494592
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | ||||  |||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  21494452 atgaacccaatctttgaatttcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 21494551  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattg 329  Q
    | ||||||||||| ||||||||   |||||||||| |||||    
T  21494552 taatgtatgaaaaggggtagttgtgaaattatgcttaattg 21494592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 472
Target Start/End: Complemental strand, 21681048 - 21680984
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| || ||||||    
T  21681048 ttgatgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaataagatgttgt 21680984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 39446967 - 39447046
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||| ||| |||| ||||||    
T  39446967 ttgataataattcatggcttgggtatgcatgatt-atgatttgttgttgagaaatgagatgttgttggtagtttggtaaaa 39447046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 20481651 - 20481565
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | |||||| || |||||||||    
T  20481651 ttgatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaaatgggt 20481565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 22147685 - 22147555
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  22147685 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 22147586  T
Q  306 tagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||   |||||||||| ||||| ||||||    
T  22147585 ttgttatgaaattatgcttaattgatgaatt 22147555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 22886590 - 22886440
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    ||||| |||||||||| | ||||||||  |||| | |  ||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  22886590 atgaatccaatctttgaatttcgtgctcttgttttggtaataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 22886491  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    | |||||||||||||||| |||   |||||||||| ||||| |||| ||||    
T  22886490 taatgtatgaaaatgggttgttgtgaaattatgcttaattgatgaactatg 22886440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 292
Target Start/End: Original strand, 18118259 - 18118376
Alignment:
Q  175 aataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatc 274  Q
    ||||||||| |||  |||||  |||| ||| ||||||||||  |||| ||||||||||||||   || | ||||||||| ||| |||||||||| ||||     
T  18118259 aataagtgattattgtgaacttaatcgttgaaattcgtgctcgtgttatagagatatgtttgcgtatataaatttgatgataattgaattgttgttgatg 18118358  T
Q  275 aaattgcaagttcatgat 292  Q
    |||||||| |||||||||    
T  18118359 aaattgcatgttcatgat 18118376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 489
Target Start/End: Complemental strand, 23837240 - 23837163
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||  ||||||||||| ||||    
T  23837240 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttggtggtggttttgtgaaat 23837163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 5854656 - 5854572
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||| ||||||||||| | |||||||||||||||||||||    
T  5854656 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgagttgttgttgttggttttgtaaaatgggttga 5854572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 20481739 - 20481683
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||| | | |||||||||||||||||||| ||| ||||||    
T  20481739 tatgctcaattggtgaattatactttgttgttgatgaattgtgataagttgcatgat 20481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 20561740 - 20561800
Alignment:
Q  314 aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| | ||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  20561740 aaattatgtttaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 20561800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 20573305 - 20573361
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||| | | ||||||| |||||||||||| ||||||||||    
T  20573305 tatgctcaattggtgaattatcctttgttgttgttgaattgtgataagtttcatgat 20573361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 374
Target Start/End: Original strand, 20647938 - 20647998
Alignment:
Q  314 aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| | ||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  20647938 aaattatgtttaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 20647998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 20654018 - 20654074
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| ||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  20654018 tatgcttaattggtgaattatgctaagttgttgatgaattgtgataagtttcatgat 20654074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 21198362 - 21198434
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||||||||||| | ||| |||||||||| || | |||||||||||||||||| |||||||| |||||||    
T  21198362 attcatggcttgggtgttcataattcatgatttgtggatgagaaatgagttgttgttggtggtttggtaaaat 21198434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 25122582 - 25122513
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||| | |||||||||| |||||| ||||    
T  25122582 ttgatgataattcatggcttggg-ttgcatgattcatgattttgttatggagaaatgagatgttgttggtg 25122513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 338
Target Start/End: Complemental strand, 2545159 - 2545061
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattat 338  Q
    |||||||||  ||| |||||||||||||| |||| ||||  ||  ||||| |||| |||||||||||||||   |||||||||| ||||| ||||||||    
T  2545159 atgttaattgaatgataaatgaattgttggtgatgaaataacatattcataatgtgtgaaaatgggtagttgtaaaattatgcttaattgatgaattat 2545061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 18612653 - 18612523
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| ||||||||||||||     
T  18612653 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgga 18612554  T
Q  306 tagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||   |||||||||| ||||| ||||||    
T  18612553 ttgttatgaaattatgcttaattgatgaatt 18612523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 497
Target Start/End: Complemental strand, 33528473 - 33528383
Alignment:
Q  408 tttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgat 497  Q
    |||| |||| ||||||||||||||| | ||| | |||||||| | || ||||||||| |||||||| | || |||||||||||||||||||    
T  33528473 tttgttgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgggttgttgttgttgattttgtaaaatgggttgat 33528383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 18619537 - 18619428
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||| | |||   |||||||||| ||    
T  18619537 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggattgttatgaaattatgcttaa 18619438  T
Q  327 ttggtgaatt 336  Q
    ||| ||||||    
T  18619437 ttgatgaatt 18619428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 20648030 - 20648087
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgag 465  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  20648030 ttgatgttaatccatggcttgggtttgcatgattcatgatttgttgtggagaagtgag 20648087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 20654106 - 20654163
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgag 465  Q
    |||||| |||||||| ||||||||||||||||||||||| ||||||| ||||| ||||    
T  20654106 ttgatgttaattcattgcttgggtttgcatgattcatgatttgttgtggagaagtgag 20654163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 21197957 - 21198080
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttga-agaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| |||||||||||||| |||||||| |||||| ||| || |||| | || |||| |||||||||| || ||||  | ||||||||||||||| ||||    
T  21197957 agggttagagagaagaggagcttgaaga-ttcaagagttggagagaacc-taggagctaaagtgaagcttgggctaggaattggtgataattaagataag 21198054  T
Q  106 ggggttagtttttatcataatcattt 131  Q
    ||||||||  || || ||||||||||    
T  21198055 ggggttagaattcattataatcattt 21198080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 462
Target Start/End: Complemental strand, 39115332 - 39115267
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaat 462  Q
    |||||||||| |||||||||||||||| |||| || |||||||||||| | || ||||||||||||    
T  39115332 tagtcatatggttgatgataattcatgacttgtgtatgcatgattcataatttattgttgagaaat 39115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 26011536 - 26011452
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||| | ||||||||| | |||||||||||||||||||||    
T  26011536 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattaagttgttgttgttggttttgtaaaatgggttga 26011452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 274487 - 274416
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| ||||||| |||| | ||||||||| ||||| ||||||||| | ||||||    
T  274487 gatgctaattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggttt 274416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 641362 - 641433
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| ||||||| |||| | ||||||||| ||||| ||||||||| | ||||||    
T  641362 gatgctaattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggttt 641433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 827168 - 827239
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| ||||||| |||| | ||||||||| ||||| ||||||||| | ||||||    
T  827168 gatgctaattcatggcttgggtatgcatgaatcataatttgttgttgtgaaataagttgttgttgttggttt 827239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 3431323 - 3431422
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| ||||||||||||| || |||   |||||||||| ||||| ||| |||||    
T  3431323 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgagttgttgtgaaattatgcttaattgatgacttatg 3431422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29760402 - 29760363
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaa 40  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  29760402 agaacaagggttagagagaagaggaacttgaagaattcaa 29760363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 16002223 - 16002113
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctc-a 325  Q
    |||||||||||  || | ||||||||| ||| | |||||||| |||| |||||| | ||||||||| | |||||||| |||  ||||||||| ||||| |    
T  16002223 gatatgtttgagtatatgaatttgatgataatttaattgttgttgatgaaattgtatgttcatgatatgtgaaaatgagtatattgtaaattgtgctcta 16002124  T
Q  326 attggtgaatt 336  Q
    |||| ||||||    
T  16002123 attgttgaatt 16002113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 489
Target Start/End: Original strand, 24929018 - 24929087
Alignment:
Q  420 tcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| |||||||| ||||| |||||||||| ||||||||||||||  ||||||| ||||||||||| ||||    
T  24929018 tcattgcttgggtatgcat-attcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 24929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 449
Target Start/End: Complemental strand, 37611724 - 37611675
Alignment:
Q  399 agtcatatgtttgatgataattcatggcttgggtttgcatgattcatgatt 449  Q
    |||||| || ||||||||||||||||||||||| |||||| ||||||||||    
T  37611724 agtcatgtggttgatgataattcatggcttggg-ttgcataattcatgatt 37611675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Complemental strand, 15933297 - 15933256
Alignment:
Q  455 tgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  15933297 tgagaattgagttgttgttgttggttttgtaaaatgggttga 15933256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 489
Target Start/End: Complemental strand, 17285309 - 17285232
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||| |||  | |||||||||||||||||| ||| |||||| |||||    
T  17285309 tgatgattcatggcttgggtattcataattcatgacttgaggatgagaaatgagttgttgttggtagttttgcaaaat 17285232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 31194529 - 31194606
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| |||||| ||||||||   |||||||||||||| |||| ||| |||||||||||||| ||||  ||||||||||    
T  31194529 tgatgattcatagcttgggtgcacatgattcatgatttgttggtgaaaaatgagttgttgttggtgactttgtaaaat 31194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 5238436 - 5238404
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  5238436 taaggtaagggggttagtctttatcataatcat 5238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 13662182 - 13662214
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  13662182 taaggtaagggggttagttattatcataatcat 13662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 13720845 - 13720877
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  13720845 taaggtaagggggttagttattatcataatcat 13720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 493
Target Start/End: Original strand, 16039092 - 16039176
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||| ||||| ||||||||| | |||||||||||| | ||||||||| ||||| ||||||||| | |||||| || |||||||||    
T  16039092 gatgctaatttatggcttggatatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaaatgggt 16039176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 16872968 - 16873000
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  16872968 taaggtaagggggttagttattatcataatcat 16873000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 472
Target Start/End: Original strand, 22235004 - 22235068
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |||| | | ||||||||||| | |||| ||||||    
T  22235004 ttgatgataattcatggattgggtttgcataattcttggtttgttgttgaggattgagatgttgt 22235068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 22907128 - 22907160
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  22907128 taaggtaagggggttagtctttatcataatcat 22907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 23149823 - 23149736
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgta--aaatgggttgat 497  Q
    |||| |||||||||||| || | ||| |||||||||| | || ||| |||||||||||||| | ||||||||||  ||||||||||||    
T  23149823 tgatgattcatggcttgagtattcataattcatgatttgatgatgaaaaatgagttgttgttgttggttttgtaagaaatgggttgat 23149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 24661162 - 24661194
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  24661162 taaggtaagggggttagtctttatcataatcat 24661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 43373392 - 43373424
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  43373392 taaggtaagggggttagtctttatcataatcat 43373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 43685895 - 43685863
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  43685895 taaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 299; Significance: 1e-168; HSPs: 7)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 166068 - 166446
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  166068 agaacaagggttagagagaagaggaacttgaagaattcaatggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaag 166167  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  166168 gtaagggggttagttttcatcataatcatctagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 166267  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||    
T  166268 tttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgatattaaatgatttgttgatgatgaaattgcaagttcatgatgtatgtaa 166367  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  166368 atgggtagtttgtaaattatgctcaattggtgaattctgcatggttgttgatgaattgtgatatgtttcatgatcaatg 166446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 59 - 489
Target Start/End: Original strand, 162040 - 162469
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatt 158  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||     
T  162040 gagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatctagttaattctttttctcttgttctatg 162139  T
Q  159 cataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaa 258  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  162140 cataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatgtgtttgaatatgttaatttgatattaaa 162239  T
Q  259 tgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattg 358  Q
    ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  162240 tgatttgttgatgatgaaattgcaagttcatgatgtatgtaaatgggtagtttgtaaattatgctcaattggtgaattctgcatggttgttgatgaattg 162339  T
Q  359 tgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttga 457  Q
    |||||||||||||||| ||||                  |||||||||  |||||||| ||  |||||||||||||||||||||||||| ||||||||||    
T  162340 tgatatgtttcatgatcaatg--gttgttgttgtttgtttagtcatattgttgatgatgatatatggcttgggtttgcatgattcatgatttgttgttga 162437  T
Q  458 gaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||  ||||||| ||||||||||| ||||    
T  162438 gaaatggattgttgttggtggttttgtgaaat 162469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 164349 - 164293
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  164349 tatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 164293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 166466 - 166547
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||| |||||  ||||||| ||||||||||| ||||    
T  166466 ttgatgatgatacatggcttgggtttgcatgattcatgatttgttgttgaaaaatggattgttgttggtggttttgtgaaat 166547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 116413 - 116485
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcattt 131  Q
    |||| |||||||||| || ||||  | |||||||||||||||||||||||||||| ||| |||||||||||||    
T  116413 gagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagatttcatcataatcattt 116485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 116718 - 116795
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| ||| |||||  ||||||| ||||||||||||||||    
T  116718 tgatgattcatggcttgggtgttcataattcatgatttgttgatgaaaaatggattgttgttggtggttttgtaaaat 116795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 164261 - 164204
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgag 465  Q
    |||||| ||||||||||||||||||||||| |||| | | ||||||||||||||||||    
T  164261 ttgatggtaattcatggcttgggtttgcataattcttggtttgttgttgagaaatgag 164204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 296; Significance: 1e-166; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 22275176 - 22274795
Alignment:
Q  1 agaactaggggtagagagaagaggaa---cttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataatt 97  Q
    ||||| |||| ||||||||||||| |   ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||    
T  22275176 agaacaagggttagagagaagagggagagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataatt 22275077  T
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  22275076 aaggtaagggggttagcctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 22274977  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22274976 atctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 22274877  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22274876 aaaatgggttgtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatgtgtttcatgatcaatg 22274795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 1 - 374
Target Start/End: Complemental strand, 22284409 - 22284033
Alignment:
Q  1 agaactaggggtagagagaagag---gaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataatt 97  Q
    ||||| |||| ||||||||||||   || ||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||| |||||||    
T  22284409 agaacaagggttagagagaagagagagagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagttagagctaatagttggagataatt 22284310  T
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||    
T  22284309 aaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcatatttgattatgagaataagtgattatcatgaactca 22284210  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22284209 atctttgaaattcgtgcttatgtggtagagatatgtttgaatatgttaatttaatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 22284110  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22284109 aaaatgaatagttagtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatgtgtttcatgat 22284033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 9652796 - 9653073
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  9652796 taaggtaagggggttagtctttatcataatcatttggttaattctttttttcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 9652895  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9652896 aatctttgaaattcgtggttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 9652995  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  9652996 gaaaatgggtagtttgtaaattatactcaattggtgaattatgcatggttgttgatgaattgcgatatttttcatgat 9653073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 21273949 - 21274226
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||| ||||| ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  21273949 taaggtaagggg-ttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 21274047  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  21274048 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 21274147  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21274148 tgaaaatgggtagtttgtaaattatactcaattggtgaattatgcatggttgttgatgaattgtaatatgtttcatgat 21274226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 45 - 339
Target Start/End: Complemental strand, 15633621 - 15633327
Alignment:
Q  45 ttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaattctttt 144  Q
    ||||||||||||| |||||||||||||||  ||| |||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  15633621 ttgaagaatcataggagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtctttatcataatcacttagttaattctttt 15633522  T
Q  145 tctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgtt 244  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||  ||| | ||||||||  |||| | | |||| ||||||  |||||    
T  15633521 tctcttgttctatgcataattgattatgagaataagtgattataatgaacccaattcttgaatttcgtgctcttgttttggtgataagtttgagtatgtt 15633422  T
Q  245 aatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||  ||| |||||||||||||| |||| ||||  || |||||| |||| |||||||||||||||   |||||||||| ||||| |||||||||    
T  15633421 aattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtttgaaaatgggtagttgtgaaattatgcttaattgatgaattatg 15633327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 98 - 339
Target Start/End: Complemental strand, 25213403 - 25213162
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaaccc 25213304  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||   | |||||| ||||||    
T  25213303 aatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaa-ttgatgttaaatgaatggttgatgatgaaataatatgttcataatgtat 25213205  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||| |||   |||||||||| ||||| ||| |||||    
T  25213204 gaaaatgggttgttgtgaaattatgcttaattgatgacttatg 25213162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 19794533 - 19794661
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  19794533 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagctagagctaatagttggagataattaag 19794632  T
Q  101 gtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||| || |||||||||||    
T  19794633 gtaagggggttagtcttcatcataatcat 19794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 43642797 - 43642913
Alignment:
Q  13 agagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggtta 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||| |||| |||||    
T  43642797 agagagaataggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaagggaaggaggtta 43642896  T
Q  113 gtttttatcataatcat 129  Q
    || ||||||||||||||    
T  43642897 gtctttatcataatcat 43642913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 7321872 - 7321633
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||  || || ||||||| ||||||||||  |  |||||| | |||| ||||  || ||||  |||||||||| |||  |||||||    
T  7321872 taaggtaagggggttagaattcattataatcacttagttaatttctactctcttttcctatgcatacgtgcttatttgaataagtgactattgtgaaccc 7321773  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    ||  |||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| |||||| || ||||| ||||| || ||| |||||||||    
T  7321772 aacttttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattttttatgatgaaatttcatgtttatgatgtat 7321673  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
      ||||||||||||||| |||| |||||||||| ||||||    
T  7321672 ataaatgggtagtttgtgaattgtgctcaattgatgaatt 7321633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 20627168 - 20627270
Alignment:
Q  27 cttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataat 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  20627168 cttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaacggggttagtctttatcataat 20627267  T
Q  127 cat 129  Q
    |||    
T  20627268 cat 20627270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 413 - 524
Target Start/End: Original strand, 19433537 - 19433649
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttg 511  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19433537 tgatgattcatggcttgggtgttcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaagtttg 19433636  T
Q  512 aatttgatgatgt 524  Q
    | |||||||||||    
T  19433637 attttgatgatgt 19433649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 23836791 - 23836874
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || || ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23836791 tgtatgaaaatgggtatgtgtgaaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 23836874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 442 - 524
Target Start/End: Original strand, 24826961 - 24827044
Alignment:
Q  442 tcatgattgttgttgagaaa-tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  24826961 tcatgattgttgttgagaaaatgagctgttgttggtggttttgtaaaatgggttgataaagaagaagtttgatattgatgatgt 24827044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 422 - 524
Target Start/End: Complemental strand, 25213081 - 25212977
Alignment:
Q  422 atggcttgggtttgcatgattcatgattgttgttgag--aaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgat 519  Q
    ||||||||||| | |||   |||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||| |||||| ||||| ||||||    
T  25213081 atggcttgggtgttcatatatcatgattgttgttgagaaaaatgagttgttggtggtggttttgtaaaatgggttgataaagaagaaatttgattttgat 25212982  T
Q  520 gatgt 524  Q
    |||||    
T  25212981 gatgt 25212977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 496
Target Start/End: Original strand, 3442 - 3529
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||| ||||||||||||||| | ||| |||||||||||| | |||||||||||||||||| ||||  |||||||||||||||||    
T  3442 ttgatgatgattcatggcttgggtgttcataattcatgattgtagatgagaaatgagttgttgttggtgactttgtaaaatgggttga 3529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 25876006 - 25876088
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25876006 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgcttcatgat 25876088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 477
Target Start/End: Complemental strand, 32465992 - 32465835
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgata 417  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| |||                   ||||||| |  |||||||||    
T  32465992 tatgctcaattggtgaattatgcattgttcttgatgaattgtgataagtttcatgatcaat---tgatgttgttgttgtttagtcatgttgttgatgata 32465896  T
Q  418 attcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  32465895 attcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 32465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 27261852 - 27261783
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||    
T  27261852 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttaagaaatgagatgttgttggtg 27261783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 28974095 - 28974026
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||    
T  28974095 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgatgagaaatgagatgttgttggtg 28974026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 4448334 - 4448402
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||| ||||    
T  4448334 ttgatgataattcatggcttgggtttgcatgattcatgatttgtgttgaaaaatgagatgttgttggtg 4448402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 22580060 - 22580140
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||| |||| ||| ||||||    
T  22580060 ttgatgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaatgagatgttgttggtgttttggtaaaa 22580140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 25602067 - 25601989
Alignment:
Q  412 atgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  25602067 atgataaatcatggcttaggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 25601989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 271216 - 271148
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||| |||||||||||||||||||||||||  ||||||| |||||| |||||| ||||    
T  271216 ttgatgataattcatagcttgggtttgcatgattcatgatttgtgttgaggaatgagatgttgttggtg 271148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 6879597 - 6879515
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  6879597 tgtatgaaaatgggta-tgtgtgaaaatatactcaattggtgaattatgcattgttattgatgaattgtgatatgtttaatgat 6879515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 339
Target Start/End: Original strand, 28031230 - 28031380
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | |||| |||| |  |||||||||   || |||||||||||||| |||| ||||  || |||||    
T  28031230 atgaacccaatctttgaatttcgtgctcttgttttggtgataagttttagtatgttaattgattgataaatgaattgttggtgatgaaataacatgttca 28031329  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    | |||| |||||||||||||||   |||||||||| ||||| |||||||||    
T  28031330 taatgtgtgaaaatgggtagttgtgaaattatgcttaattgatgaattatg 28031380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 362
Target Start/End: Complemental strand, 33128308 - 33128135
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||    ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  33128308 atgaacccaatctttaattttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 33128209  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    | |||||||||||||||| |||   |||||||||| ||||| ||| ||||| ||| ||||||| |||||||||||    
T  33128208 taatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatgacat-gttgttgttgaattgtgat 33128135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 462 - 524
Target Start/End: Complemental strand, 43645886 - 43645824
Alignment:
Q  462 tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  43645886 tgagttgttggtggtggttttgtaaaatgggttggtaatgaaaaagtttgattttgatgatgt 43645824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 292
Target Start/End: Complemental strand, 20279688 - 20279571
Alignment:
Q  175 aataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatc 274  Q
    ||||||||| |||  |||||  |||| ||| |||||||||| ||||| ||||||||||||||   || | ||||||||| ||| |||||||||| ||||     
T  20279688 aataagtgattatggtgaacttaatcgttgaaattcgtgctcatgttatagagatatgtttgggtatatgaatttgatgataattgaattgttgttgatg 20279589  T
Q  275 aaattgcaagttcatgat 292  Q
    |||||||| |||||||||    
T  20279588 aaattgcatgttcatgat 20279571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 22284001 - 22283921
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||| || ||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||| ||||||||||| ||||    
T  22284001 ttgatgatgatacatggcttgggtt-gcatgattcatgaattgctgttgagaaatgaattgttgttggtggttttgtgaaat 22283921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 23836906 - 23836975
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||| |||||| ||||    
T  23836906 ttgatgataattcatgacttgggtttgcataattcttgatttgttgttgagaaatgagatgttgttggtg 23836975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 722437 - 722353
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||||||||||| ||||| |||||||| || ||| ||||| |||||||||||| ||||  |||||||||| ||||||    
T  722437 tgataattcatggcttgggtgtgcataattcatgatttattgatgagatatgagttgttgttggtgactttgtaaaattggttga 722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 22274779 - 22274688
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||  |||||||| ||  |||||||||||| ||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  22274779 tagtcatattgttgatgatgatagatggcttgggtt-gcatgattcatgaattgttgttgagaaatggattgttgttggtggttttgtgaaat 22274688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 493
Target Start/End: Original strand, 36890888 - 36890972
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||| ||||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||| | |||||| || |||||||||    
T  36890888 gatgattattcatggcttgggtatgcatgattcttgatttgttgttgagaaataagttgttgttgttggtttggtgaaaatgggt 36890972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 271304 - 271248
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||| ||||||||||    
T  271304 tatgctcaattggtgaattatgttttgttgttgttgaattgtgataagtttcatgat 271248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 24571493 - 24571572
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||| ||||| ||||| | || ||||||||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  24571493 ttgatgataactcatg-cttggctatgtatgattcatgatttgttgttgagaaatgagatgttgttggtggtttggtaaaa 24571572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 24826748 - 24826860
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||    
T  24826748 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaa 24826847  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  24826848 ttgatgacttatg 24826860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 493
Target Start/End: Original strand, 25876120 - 25876206
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||||||||||||||||||||||||||| |||| | | ||||| ||| ||||| ||||||||| | |||||| || |||||||||    
T  25876120 ttgatgataattcatggcttgggtttgcataattcttggcttgttattgtgaaataagttgttgttgttggtttggtgaaaatgggt 25876206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 9653107 - 9653179
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  9653107 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 9653179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 497
Target Start/End: Complemental strand, 24884684 - 24884643
Alignment:
Q  456 gagaaatgagttgttgtcggtggttttgtaaaatgggttgat 497  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  24884684 gagaaatgagttgttgttgttggttttgtaaaatgggttgat 24884643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 17204529 - 17204445
Alignment:
Q  255 taaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  17204529 taaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 17204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 25602158 - 25602102
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| ||||||   || ||||||||||||||||| ||||||||||    
T  25602158 tatgctcaattggtgagttatgctatgtggttgatgaattgtgataagtttcatgat 25602102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 36890798 - 36890854
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| ||||||||||||||||   ||||||||| |||||||||| ||||||||||    
T  36890798 tatgcttaattggtgaattatgctatgttgttgataaattgtgataagtttcatgat 36890854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 483
Target Start/End: Complemental strand, 25305487 - 25305416
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttg 483  Q
    |||| ||||||||| ||||| | ||| |||||||||| |||| |||||||||||||||||| ||| ||||||    
T  25305487 tgatgattcatggcctgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtagttttg 25305416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 25305875 - 25305769
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| ||||||||| |||| |||||||| ||||||  || ||||| ||| || |||  |||||||||| || ||||  | ||||||||||||||||||||    
T  25305875 agggttagagagaataggagcttgaaga-ttcaagaattggaagagatcctaggagttaaagtgaagcttgggctatgaattggtgataattaaggtaag 25305777  T
Q  106 ggggttag 113  Q
    ||||||||    
T  25305776 ggggttag 25305769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 43646286 - 43646232
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttag 113  Q
    |||| |||||||||| || ||||  | ||||||||||||||||||||||||||||    
T  43646286 gagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 43646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 19666884 - 19666843
Alignment:
Q  93 taattaaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||||||||||||||||||||  || ||||||||||||||||    
T  19666884 taattaaggtaagggggttagaattcatcataatcatttagt 19666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 19689314 - 19689347
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| ||||||||||||||    
T  19689314 ttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 463075 - 463043
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  463075 taaggtaagggggttagtctttatcataatcat 463043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 3798520 - 3798552
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  3798520 taaggtaagggggttagttattatcataatcat 3798552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 4448246 - 4448302
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||| |||| | ||||||| |||||| ||||| ||||||||||    
T  4448246 tatgttcaattggtgaatgatgctttgttgttgttgaattatgataagtttcatgat 4448302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 8944185 - 8944153
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  8944185 taaggtaagggggttagttattatcataatcat 8944153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 12635785 - 12635817
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  12635785 taaggtaagggggttagttattatcataatcat 12635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 12641559 - 12641591
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  12641559 taaggtaagggggttagttattatcataatcat 12641591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 12728731 - 12728699
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  12728731 taaggtaagggggttagttattatcataatcat 12728699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 14906354 - 14906386
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  14906354 taaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 16935932 - 16935900
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  16935932 taaggtaagggggttagttattatcataatcat 16935900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 17006592 - 17006560
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  17006592 taaggtaagggggttagttattatcataatcat 17006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 19660316 - 19660221
Alignment:
Q  12 tagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggg 108  Q
    |||||||||||||| | |||||| |||||| ||| ||   ||| || |||| |||||||||| || ||||  | |||||||||||||||||||||||    
T  19660316 tagagagaagaggatcatgaaga-ttcaagagttggagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggg 19660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 22863267 - 22863235
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  22863267 taaggtaagggggttagtctttatcataatcat 22863235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 23820420 - 23820388
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  23820420 taaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 28974183 - 28974123
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaat 378  Q
    |||||||| |||| |||||||||   ||||||||||||||||| || |||||||||| |||    
T  28974183 tatgctcatttggcgaattatgctatgttgttgatgaattgtggtaagtttcatgatcaat 28974123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 36982364 - 36982396
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  36982364 taaggtaagggggttagtctttatcataatcat 36982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 42177886 - 42177918
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  42177886 taaggtaagggggttagttattatcataatcat 42177918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 489
Target Start/End: Complemental strand, 30545 - 30056
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| ||||| |||||||||||||||    
T  30545 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcatagaagcaaaagtgaagcttgagttaataattggtgataattaag 30446  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||    
T  30445 gtaagggggttatttttcatcataatcatttagttaattatttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccctatc 30346  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30345 tttgaaattcatgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaa 30246  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaatta---tgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    ||||||||||||||||||||||||||||| ||  | |   || |||||||||||||||||||||||||||||||||| ||||                      
T  30245 atgggtagtttgtaaattatgctcaattgttgtttgaaattgtatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtt 30149  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  30148 tagtcatattgttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 30056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 281; Significance: 1e-157; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 39 - 489
Target Start/End: Original strand, 5925 - 6373
Alignment:
Q  39 aagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaat 138  Q
    ||||||||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  5925 aagggtttgaagaattataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatatagttaat 6024  T
Q  139 tctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaa 238  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  6025 tctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatgtgtttgaa 6124  T
Q  239 catgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattat 338  Q
     |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6125 tatgttaatttgatgttaaatgatttgttaatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattat 6224  T
Q  339 gcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnntagtcatatgtttgatgataattcatggcttgggtttgcat 438  Q
    |||||||||||||||||||||||||||||||||||| ||||                  |||| ||||  |||||||| || |||| |||||||||||||    
T  6225 gcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgtttagtaatattgttgatgatgatacatgacttgggtttgcat 6321  T
Q  439 gattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    ||||||||| ||||||||||||||||  ||||||| ||||||||||| ||||    
T  6322 gattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 6373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 5681 - 5923
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||| ||||||||||    
T  5681 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaattataggagcaaaagtgaagctagagctaatagttggagataattaag 5780  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  5781 gtaagggggttagttttcatcataatcatatagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 5880  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgt 243  Q
    |||| ||||||||||| |||||||||||| |||||||| ||||    
T  5881 tttgaaattcgtgcttctgttgtagagatgtgtttgaatatgt 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 97 - 481
Target Start/End: Complemental strand, 2032165 - 2031783
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  2032165 taaggtaagggggttagttttcatcataatcgtttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 2032066  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2032065 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 2031966  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnn 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                     
T  2031965 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg---gttgttgttgttgt 2031869  T
Q  397 ntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
     |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  2031868 ttagtcatattgttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 2031783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 98 - 502
Target Start/End: Complemental strand, 11343039 - 11342635
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccca 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  11343039 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccca 11342940  T
Q  198 atctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatg 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11342939 atctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatg 11342840  T
Q  298 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnnnnn 397  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  11342839 aaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatcaatg--gttgttgttgtttgtt 11342742  T
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttg 495  Q
    |||||||||  |||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||  ||||||| ||||  || || |||||||||||    
T  11342741 tagtcatattgttgatgatgatatatggcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtgtcttggtgaaaatgggttg 11342642  T
Q  496 ataatga 502  Q
    || ||||    
T  11342641 attatga 11342635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 110 - 374
Target Start/End: Complemental strand, 21205268 - 21205004
Alignment:
Q  110 ttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaatt 209  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  21205268 ttagtctttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatctttgaaatt 21205169  T
Q  210 cgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagt 309  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21205168 cgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagt 21205069  T
Q  310 ttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21205068 ttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 21205004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 21651050 - 21650773
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||| |||||||||| ||||||||||||    
T  21651050 taaggtaagggggttaatatttatcataatcatttggttaattctttttctcttgttctgtgcatagttgattatgggaataagtgattatcatgaaccc 21650951  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21650950 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 21650851  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  21650850 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgttgaattgtgataagtttcatgat 21650773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 97 - 339
Target Start/End: Complemental strand, 16105999 - 16105757
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  16105999 taaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 16105900  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||||| ||||   | |||||| |||||    
T  16105899 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaa-ttgatgttaaatgaatggttgatgatgaaataatatgttcataatgta 16105801  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||||||||| |||   |||||||||| ||||| ||| |||||    
T  16105800 tgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 16105757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 398 - 523
Target Start/End: Complemental strand, 11584108 - 11583982
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggttt-gcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  11584108 tagtcatatggttgatgataattcatggcttgggttttgcatgattcatgattgttgttgagaaatgagttgttgttcgtggttttgtaaaatgggttga 11584009  T
Q  497 taatgaagaagtttgaatttgatgatg 523  Q
    | |||||||||||||  ||||||||||    
T  11584008 tgatgaagaagtttgtttttgatgatg 11583982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 11584495 - 11584374
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagg 106  Q
    |||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  11584495 agggttagagagaagaggaacttgaagaattcaagggtgtgaataatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagg 11584396  T
Q  107 gggttagtttttatcataatca 128  Q
    |||||||  || ||||||||||    
T  11584395 gggttagaattcatcataatca 11584374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 175 - 327
Target Start/End: Original strand, 22662653 - 22662805
Alignment:
Q  175 aataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatc 274  Q
    ||||||||| |||  ||||||||||||||| |||||||||| ||||||||| ||||| |||||| |||||||||||||| ||| |||||||||||||||     
T  22662653 aataagtgattattgtgaacccaatctttgaaattcgtgctcatgttgtagtgatatatttgaatatgttaatttgatgataattgaattgttgatgatg 22662752  T
Q  275 aaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaat 327  Q
    |||||||| |||||||||||||  ||||||||||||||  ||||||| |||||    
T  22662753 aaattgcatgttcatgatgtatataaatgggtagtttgagaattatgttcaat 22662805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 339
Target Start/End: Complemental strand, 25005165 - 25004929
Alignment:
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    |||||||||||||| || ||||||||||||||||| | |  |||||  ||||| |||  |||| || | |   |||||||||| |||  |||||||||||    
T  25005165 gtaagggggttagtcttcatcataatcatttagtttagt--ttttcaattgttgtatgaataagtgctcaattgaataagtgattattgtgaacccaatc 25005068  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaa 300  Q
    |||| |||||||||| |||||| || |||||||||||   ||||||||| | | ||| ||||||||| || || |||||||| |||||||||||||| ||    
T  25005067 tttgaaattcgtgctcatgttgaagtgatatgtttgagtgtgttaatttaaggataattgaattgttaattatgaaattgcatgttcatgatgtatgtaa 25004968  T
Q  301 atgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||||||||||  ||||||||||||||||||| |||||    
T  25004967 atgggtagtttgagaattatgctcaattggtgatttatg 25004929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 442 - 524
Target Start/End: Complemental strand, 16105656 - 16105573
Alignment:
Q  442 tcatgattgttgttgagaaa-tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  16105656 tcatgattgttgttgagaaaatgagttgttgttggtggttttgtaaaatgggttgataaagaagaagtttgattttgatgatgt 16105573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 442 - 524
Target Start/End: Original strand, 109075 - 109158
Alignment:
Q  442 tcatgattgttgttgagaaa-tgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  109075 tcatgattgttgttgagaaaatgagttgttgttggtggttttgtaaaatgggttgatagagaagaagtttgattttgatgatgt 109158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 409 - 502
Target Start/End: Original strand, 1168405 - 1168500
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatga 502  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| |||  | ||||||||||||| ||||    
T  1168405 ttgatgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttgatgaaaatgggttgattatga 1168500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 11337387 - 11337455
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  11337387 ttgatgataattcatggcttgagtttacatgattcatgattgttgttgagaaatgagatgttgttggtg 11337455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 21397253 - 21397170
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  21397253 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 21397170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 4865397 - 4865341
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  4865397 tatgctcaattggtgaattatgcattgtggttgatgaattgtgatatgtttcatgat 4865341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 19405583 - 19405503
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||| |||| ||| ||||||    
T  19405583 ttgatgataattcatggcttgggtatgcatgattcatgatttgttgtggagaaatgagatgttgttggtgttttggtaaaa 19405503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 21646826 - 21646908
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || || |||| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  21646826 tgtatgaaaatgggtatgtatgaaaat-atgttcaattggtgaattatgtatcgttgttgatgaattgtgatatgtttcatgat 21646908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 1168317 - 1168373
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  1168317 tatgctcaattggtgaattatgcaatgttgttgatgaattgtgataagtttcatgat 1168373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 24475738 - 24475658
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  24475738 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgt--tatgtttcatgat 24475658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 28261655 - 28261599
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  28261655 tatgctcaattggtgaattatgcattgttgttgataaattgtgatatgttttatgat 28261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 7529164 - 7529014
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||| | ||| | ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  7529164 atgaacccaacccttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 7529065  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |  |||||||||||||||||||   |||||||||| ||||| |||||||||    
T  7529064 tagtgtatgaaaatgggtagttgtgaaattatgcttaattgatgaattatg 7529014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 21397135 - 21397073
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgtt 470  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||    
T  21397135 ttgatgataattcatggcttgggtttgcatgattcatggtttgttattgagaaatgagatgtt 21397073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 24475629 - 24475560
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  24475629 ttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 24475560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 488
Target Start/End: Complemental strand, 16595550 - 16595474
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||| |||||| ||| |||| ||||||    
T  16595550 tgataattcatgacttgggtgtgcatgattcatgaattgttgatgagaaatgagatgttgttggtagtttggtaaaa 16595474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 20712210 - 20712154
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||    
T  20712210 tatgctcaattggtgaattatgctttgttgttgatgaattgtgataagttgcatgat 20712154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 477
Target Start/End: Complemental strand, 28261566 - 28261498
Alignment:
Q  410 tgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  28261566 tgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 28261498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 32966352 - 32966436
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgattg-ttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||||| |  ||||| |||||| |||| ||| |||||||||||||||||| ||||  |||||||||||||||||    
T  32966352 tgataattcatggcttgagcgtgcataattcataattggttgatgagaaatgagttgttgttggtgactttgtaaaatgggttga 32966436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 17909752 - 17909622
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  17909752 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 17909653  T
Q  306 tagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||   |||||||||| ||||| ||||||    
T  17909652 ttgttatgaaattatgcttaattgatgaatt 17909622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 493
Target Start/End: Complemental strand, 20712122 - 20712036
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | |||||| || |||||||||    
T  20712122 ttgatgttaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggtttggtgaaaatgggt 20712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 5450646 - 5450770
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| |||||||||||||| |||||||| ||||||  || ||||| ||| || |||| |||||||||| || ||||  | ||| | ||||||||||||||    
T  5450646 agggttagagagaagaggagcttgaaga-ttcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaattgataataattaaggtaag 5450744  T
Q  106 ggggttagtttttatcataatcattt 131  Q
    ||||||||  || |||||||||||||    
T  5450745 ggggttagaattcatcataatcattt 5450770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 446
Target Start/End: Complemental strand, 21906766 - 21906729
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatg 446  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21906766 ttgatgataattcatggcttgggtttgcatgattcatg 21906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 23466503 - 23466434
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||  |||||| ||||    
T  23466503 ttgatgatagttcatggcttgggtatgcatgattcatgatttgttgttgaggaatgatatgttgttggtg 23466434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 7728466 - 7728378
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||||||||||| || |||||||| ||||| ||||||| ||||||| ||||| ||||| |||||| ||||  |||| ||||||||||||    
T  7728466 ttgatgataatttatcgcttgggtgtgcataattcatgaattgttggtgagagatgaggtgttgttggtgactttgaaaaatgggttga 7728378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 24183245 - 24183301
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||  ||||||||||    
T  24183245 tatgctcaattggtgaattatgctttgttgttgttgaattgtgatgagtttcatgat 24183301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 449
Target Start/End: Original strand, 24183330 - 24183370
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt 449  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  24183330 ttgatgataattaatggcttgggtttgcatgattcatgatt 24183370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 9730425 - 9730524
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||||||| ||||| ||| |||||    
T  9730425 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatg 9730524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 496
Target Start/End: Complemental strand, 21617053 - 21616974
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||| | ||| |||||||||| | || |||||| |||| |||||| | |||||||||||||||||||||    
T  21617053 attcatggcttgggtgttcataattcatgatttgatgatgagaagtgagctgttgtggttggttttgtaaaatgggttga 21616974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 4865309 - 4865239
Alignment:
Q  409 ttgatgataatt-catggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||| |||||||||||||||||| |||| || ||||||||||||| ||||| |||||| ||||    
T  4865309 ttgatgataatttcatggcttgggtttgcataattcttgaattgttgttgagagatgaggtgttgttggtg 4865239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 11584188 - 11584124
Alignment:
Q  318 tatgctcaattggtgaattatgc---atggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||    | ||||||| ||||||||||||||||||||||| ||||    
T  11584188 tatgctcaattggtgaattatgctttgttgttgttgttgaattgtgatatgtttcatgatcaatg 11584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 24225596 - 24225634
Alignment:
Q  485 aaaatgggttgataatgaagaagtttgaatttgatgatg 523  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  24225596 aaaatgggttgataatgaagaagtttgattttgatgatg 24225634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 21646940 - 21647009
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||| || |||  | | |||||||||||||||||| |||||| ||||    
T  21646940 ttgatgataattcatggcttgggtttgtataattattggtttgttgttgagaaatgagatgttgttggtg 21647009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 11337299 - 11337355
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| |||||||||||||    |||||||||||||||||||| ||||||||||    
T  11337299 tatgctcatttggtgaattatgttatgttgttgatgaattgtgataagtttcatgat 11337355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 21204965 - 21204898
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  21204965 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 21204898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 21906851 - 21906795
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||| ||||||||||   |||||||||||||||||||| ||||||||||    
T  21906851 tatgttcaattgatgaattatgctatgttgttgatgaattgtgataagtttcatgat 21906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 497
Target Start/End: Complemental strand, 23493965 - 23493875
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgat 497  Q
    |||||||| ||||||||||||||| | ||| |||||||| ||| || |||||||| ||||||||| | |||||| || |||||| ||||||    
T  23493965 ttgatgatgattcatggcttgggtgttcataattcatgatttgatgatgagaaataagttgttgttgttggtttggtgaaaatgagttgat 23493875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 108862 - 108974
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| || |  || |||||| |||||||||||||| | |||   |||||||||| ||    
T  108862 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaattaacatgttcataatgtatgaaaatggattgttgtgaaattatgcttaa 108961  T
Q  327 ttggtgaattatg 339  Q
    ||| ||| |||||    
T  108962 ttgatgacttatg 108974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 7425663 - 7425631
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  7425663 taaggtaagggggttagttattatcataatcat 7425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 480
Target Start/End: Complemental strand, 19862251 - 19862183
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggtt 480  Q
    |||| ||||||| ||||||| | ||| |||||||||| | || |||||||||||||||||| |||||||    
T  19862251 tgatgattcatgacttgggtgttcataattcatgatttgatgatgagaaatgagttgttgttggtggtt 19862183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 20623318 - 20623286
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  20623318 taaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 21233442 - 21233474
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  21233442 taaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 23507302 - 23507270
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  23507302 taaggtaagggggttagtctttatcataatcat 23507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 25900320 - 25900352
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  25900320 taaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 488
Target Start/End: Complemental strand, 29918007 - 29917931
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||| ||||||||||||||| | ||| | |||||||| | ||||||||||| | || |||||| |||||||||||||    
T  29918007 tgatgattcatggcttgggtgttcataaatcatgatttgatgttgagaaataaattattgtcgttggttttgtaaaa 29917931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 35791015 - 35791047
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  35791015 taaggtaagggggttagttattatcataatcat 35791047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 37053093 - 37053061
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  37053093 taaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 43 - 379
Target Start/End: Original strand, 298 - 633
Alignment:
Q  43 gtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaattctt 142  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||    
T  298 gtttgaagaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaacggggttattctttatcataatcatctagttaattctt 397  T
Q  143 tttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatg 242  Q
    || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||| |||||| |||    
T  398 tt-ctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatatttgaaatttgtgcttatgttgtagagatatatttgaatatg 496  T
Q  243 ttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcat 342  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  497 ttaatttgatgttaaatgaattgtagatgatgaaattgcaagttcatgatgtatgaaaatgaatagtttgtaaattatgctcaattggtgaattatgcat 596  T
Q  343 ggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||||||||||| ||||    
T  597 ggttgttgatgaattgtgatatgtttcatgatcaatg 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 484
Target Start/End: Original strand, 652 - 736
Alignment:
Q  401 tcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt 484  Q
    ||||||  |||||||| || |||||||||||||||||||||| || | ||||||||||||||||  || |||| |||||||||||    
T  652 tcatattgttgatgatgatacatggcttgggtttgcatgattaataatttgttgttgagaaatggattattgttggtggttttgt 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 242; Significance: 1e-134; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 97 - 374
Target Start/End: Complemental strand, 55936 - 55659
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  55936 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaaccc 55837  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  55836 aatctttgaaattcgtgcttatgttgtagatatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtag 55737  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55736 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 55659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 200
Target Start/End: Original strand, 108075 - 108179
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctctt-gttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||    
T  108075 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttcattctatgcataattgattatgagaataagtgattatcatgaacc 108174  T
Q  196 caatc 200  Q
    |||||    
T  108175 caatc 108179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 496
Target Start/End: Original strand, 93973 - 94061
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||||  ||||||   ||| |||||||||| |||| ||||||||||| |||||| ||||  |||||||||||||||||    
T  93973 ttgatgataattcatgatttgggtgaacataattcatgatttgttggtgagaaatgagatgttgttggtgactttgtaaaatgggttga 94061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 104480 - 104555
Alignment:
Q  59 gagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagt 134  Q
    |||| |||||||||| || ||||| | || ||| ||||||||||||| |||||||  || ||||||||||||||||    
T  104480 gagctaaagtgaagcttgggctaagaatttgtgctaattaaggtaagtgggttagaattcatcataatcatttagt 104555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 55625 - 55553
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  |||||||||  |||| ||||||||| | ||||||    
T  55625 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtaaaataagttgttgttgttggttt 55553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 878 - 1155
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  878 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgggaataagtgattatcatgaaccc 977  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  978 aatctttgaaattcgtgcttatgttgtagaggtttgttttaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 1077  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1078 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 1194 - 1261
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||| |||||||||||| |  ||||||||||||||| ||||||||| | ||||||    
T  1194 taattcatggcttgggtatgcatgattcataattttgttgttgagaaataagttgttgttgttggttt 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 13285 - 13563
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  13285 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaacc 13384  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  13385 caatctttgaaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgta 13484  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13485 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 13563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 269 - 374
Target Start/End: Original strand, 21432 - 21537
Alignment:
Q  269 atgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgttt 368  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21432 atgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgttt 21531  T
Q  369 catgat 374  Q
    ||||||    
T  21532 catgat 21537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 13597 - 13669
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  13597 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 13669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 21576 - 21634
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  21576 taattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 21634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 234; Significance: 1e-129; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 97 - 481
Target Start/End: Original strand, 12418 - 12802
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||| | ||||||||||||    
T  12418 taaggtaagggggttagtttttatcataatcatttagttaattctttttcttttgttctatgcataattgattatgggaataagttattatcatgaaccc 12517  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaa--tgaattgttgatgatcaaattgcaagttcatgatgt 294  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| | ||  ||||||||||||||| ||||||||||||||||||||    
T  12518 aatctttgaaatttgtgcttatgttgtagagatatgtttgaatatgttaatttgatgattaatgtgaattgttgatgatgaaattgcaagttcatgatgt 12617  T
Q  295 atgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnnnnnn 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||                   
T  12618 atgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatgattgttgatgaattgtgatatgtttcatgattaatg---gttgttgttgtt 12714  T
Q  395 nnntagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
       |||||||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| | ||||||| | ||||||    
T  12715 gtttagtcatatggttgatgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggttt 12802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 19099 - 19183
Alignment:
Q  398 tagtcatatgtttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| | ||||||| | ||||||    
T  19099 tagtcatatggttgatgataattcatggcttgggtatgcatgattcataatttgttgttgagaaataaattgttgttgttggttt 19183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 379
Target Start/End: Original strand, 19049 - 19083
Alignment:
Q  345 ttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    |||||||||||||||||||||||||||||||||||    
T  19049 ttgttgatgaattgtgatatgtttcatgattaatg 19083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 230; Significance: 1e-127; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 6443 - 6720
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||  ||||||||||||    
T  6443 taaggtaagggggttagtctttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgataataggtgcttatcatgaaccc 6542  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6543 aatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgtcaaatgaattgttgatgatgaaattgcaagttcatgatgtat 6642  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6643 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgataagtttgatgat 6720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 6754 - 6816
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| |||||||||    
T  6754 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgt 6816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 97 - 374
Target Start/End: Original strand, 17304 - 17581
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  17304 taaggtaagcgggttagtctttatcataatcatttaggtaattctttttctcttgttctatgcataattgattatgagaataattgattatcatgaaccc 17403  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17404 aatctttgaaattagtgcttatgtggtagagatatgtttgaatatgttaatttgattttaaatgaattgttgatgatgaaattgcaagttcatgatgtat 17503  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17504 gaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgataagtttcatgat 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 17615 - 17686
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatgat-tgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| || |||||||| ||||| ||||||||| | ||||||    
T  17615 gatgctaattcatggcttgggtatgcatgattcataatatgttgttgtgaaataagttgttgttgttggttt 17686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 203; Significance: 1e-110; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 96 - 374
Target Start/End: Original strand, 193396 - 193664
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  193396 ttaaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacc 193495  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||| ||| |||||||||         ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  193496 caatcattgaaattcgtgc---------agagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgta 193586  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  193587 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgat-tattgtgatatgtttcatgat 193664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 231 - 374
Target Start/End: Original strand, 186560 - 186702
Alignment:
Q  231 tgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattgg 330  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186560 tgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattgg 186659  T
Q  331 tgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  186660 tgaattatgcatggttgttgat-tattgtgatatgtttcatgat 186702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 193698 - 193770
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  193698 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgcgaaataagttgttgttgttggttt 193770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 472
Target Start/End: Original strand, 186736 - 186799
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| |||||||||    
T  186736 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgt 186799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 97 - 343
Target Start/End: Original strand, 4346 - 4593
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||| |||||||||| |||||||||||    
T  4346 taaggtaagggggttagactttatcataatcatttggttaattctttttctcttcattctatgcataattgattatgggaataagtgattatcatgaacc 4445  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4446 caatctttgaaattagtgcttatgttgtagagatatgtttaaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgta 4545  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatg 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4546 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatg 4593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 174 - 374
Target Start/End: Original strand, 5 - 205
Alignment:
Q  174 gaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgat 273  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5 gaataagtgattatcatgaacccaatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgat 104  T
Q  274 caaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatga 373  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  |||||||||| ||||| |||||||||    
T  105 gaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcataataattgatgaattatgataagtttcatga 204  T
Q  374 t 374  Q
    |    
T  205 t 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 180; Significance: 6e-97; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 42802 - 42568
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||   ||    
T  42802 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagctagagctaatagttggagataa---ag 42706  T
Q  101 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42705 gtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctatgcataattgattatgagaataagtgattatcatgaacccaatc 42606  T
Q  201 tttggaattcgtgcttatgttgtagagatatgtttgaa 238  Q
    |||| ||||||||||||||| ||||||||||| |||||    
T  42605 tttgaaattcgtgcttatgtggtagagatatggttgaa 42568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 174; Significance: 2e-93; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 165 - 374
Target Start/End: Complemental strand, 15236 - 15027
Alignment:
Q  165 tgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaatt 264  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  15236 tgattatgggaataagtgattatcatgaacccaatctttgaaattcgtgcttatgtcgtagagatatgtttgaatatgttaatttgatgttaaatgaatt 15137  T
Q  265 gttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatat 364  Q
    ||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15136 gttgatgatgaaattgcaagttcatgatgtatgaaaatgtttattttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatat 15037  T
Q  365 gtttcatgat 374  Q
    ||||||||||    
T  15036 gtttcatgat 15027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 14993 - 14921
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| |  ||||||||| ||||| ||||||||| | ||||||    
T  14993 gatgctaattcatggcttgggtatgcatgattcataattttgttgttgtgaaataagttgttgttgttggttt 14921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 882 - 914
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  882 taaggtaagggggttagtctttatcataatcat 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 172; Significance: 3e-92; HSPs: 2)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 97 - 379
Target Start/End: Original strand, 9882 - 10148
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataa-ttgattatgagaataagtgaatatcatgaacc 195  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||    
T  9882 taaggtaagggggttagtctttatcataatcatttggttaattctttttctcttgttctatgcataaattgattatgaaaataagtgattatcatgaacc 9981  T
Q  196 caatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgta 295  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9982 caatctttgaaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgta 10081  T
Q  296 tgaaaatgggtagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatg 379  Q
    ||||||||||||                 |||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  10082 tgaaaatgggta-----------------aattggcgaattatgcttggttgttgatgaattgtgataagtttcatgatcaatg 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 10177 - 10248
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  10177 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgatggttt 10248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 131; Significance: 1e-67; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 98 - 339
Target Start/End: Complemental strand, 130911 - 130670
Alignment:
Q  98 aaggtaagggggttagtttttatcataatcatttagttaattctttttctcttg-ttctattcataattgattatgagaataagtgaatatcatgaaccc 196  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcatttgattaattctttttctcttgattctatgcataattgattatgagaataagtgattatcatgaaccc 130812  T
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| |||||||||| |||||||||||||||||||| | | ||||| |||||||||||||||| ||||||||| ||||   | |||||| ||||||    
T  130811 aatctttgaaattcgtgctcatgttgtagagatatgtttggatacgttaa-ttgatgttaaatgaatggttgatgatgaaataatatgttcataatgtat 130713  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||| |||   |||||||||| ||||| ||| |||||    
T  130712 gaaaatgggttgttgtgaaattatgcttaattgatgacttatg 130670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 422 - 524
Target Start/End: Complemental strand, 130589 - 130486
Alignment:
Q  422 atggcttgggtttgcatgattcatgattgttgttgag-aaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatg 520  Q
    ||||||||||| | |||   ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||    
T  130589 atggcttgggtgttcatatatcatgattgttgttgagaaaatgagttgttgttggtggttttgtaaaatgggttaataaagaagaagtttgattttgatg 130490  T
Q  521 atgt 524  Q
    ||||    
T  130489 atgt 130486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 89578 - 89637
Alignment:
Q  314 aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatga 373  Q
    ||||| ||||||||||||||||||||| | ||||||| | |||||||||| |||||||||    
T  89578 aaattgtgctcaattggtgaattatgctttgttgttgttaaattgtgataagtttcatga 89637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 79581 - 79521
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatg-attgttgttgagaaatgagttgttgt 472  Q
    |||| ||||||||||||||| | ||| ||||||| |||| || ||||||||||||||||||    
T  79581 tgatgattcatggcttgggtattcataattcatgaattggtgatgagaaatgagttgttgt 79521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 3345 - 3230
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3345 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaagt 3246  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  3245 ttgattttgatgatgt 3230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 93 - 362
Target Start/End: Original strand, 44009 - 44279
Alignment:
Q  93 taattaaggtaagggggttagttttta-tcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| |||||| |||||||| ||| | ||||||||| ||||||||||  || |||||| | |||| ||||| |||||||  |||||||||| |||  ||    
T  44009 taattgaggtaacggggttagatttcaatcataatcacttagttaatttcttctctcttttgctatgcataagtgattatttgaataagtgattattgtg 44108  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatga 291  Q
    |||| |||||||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  44109 aacctaatctttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatggtaattgaattgttgatgatgaaattgcatgttcatga 44208  T
Q  292 tgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    |||||| ||||  ||||||||| | |||||||||||||  |||||||| ||| ||||||| |||||||||||    
T  44209 tgtatgtaaataagtagtttgtgagttatgctcaattgacgaattatgacat-gttgttgttgaattgtgat 44279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 7 - 339
Target Start/End: Complemental strand, 547 - 219
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagg 106  Q
    |||| |||||||||||||| |||||||| ||||||| || |||||    || |||| |||||||||| |||||||  | |||||||||| | ||||||||    
T  547 agggttagagagaagaggagcttgaaga-ttcaaggattggaagagggctaggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagg 449  T
Q  107 gggttagtttttatcataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatgaacccaatctttgga 206  Q
    |||||||  || ||  ||||||||||||  | |   ||||  ||||| |||  |||| || |||   |||||||||| |||  ||||||||||||||| |    
T  448 gggttagaattcattgtaatcatttagtgtagt---tttcatttgttgtatgaataagtgcttaattgaataagtgattattgtgaacccaatctttgaa 352  T
Q  207 attcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggt 306  Q
    |||| |||| ||||||||| |||||||||||  |||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||  ||||| ||    
T  351 attcttgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatgtgt 252  T
Q  307 agtttgtaaattatgctcaattggtgaattatg 339  Q
    ||||||| ||||||||||||||| |||||||||    
T  251 agtttgtgaattatgctcaattgttgaattatg 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 64 - 339
Target Start/End: Original strand, 1371 - 1643
Alignment:
Q  64 aaagtgaagcatgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcatttagttaattctttttctcttgttctattcataa 163  Q
    |||||||||| |||||||  | |||||||||||| |||||||||||||||  || ||||||||||||||||  | |   ||||  ||||| |||  ||||    
T  1371 aaagtgaagcttgagctaggaattggtgataattgaggtaagggggttagaattcatcataatcatttagtgtagt---tttcatttgttgtatgaataa 1467  T
Q  164 ttgattatgagaataagtgaatatcatgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaat 263  Q
     || |||   |||||| ||| |||  ||||||||||||||| |||||||||| ||||||||| |||||||||||  |||||||||||||| ||| |||||    
T  1468 gtgcttaattgaataaatgattattgtgaacccaatctttgaaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaat 1567  T
Q  264 tgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||| |||||||| |||||||||||||  ||||| ||||||||  ||||||||||||||| |||||||||    
T  1568 tgttgatgatgaaattgcatgttcatgatgtatataaatgagtagtttgagaattatgctcaattgatgaattatg 1643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 206 - 374
Target Start/End: Original strand, 9516 - 9684
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||   || ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  9516 aattcgtgctcttgttttggtgataagtttgagtatgttaattgattgctaaatgaattgttgatgatgaaattgcaagtttatgatgtatgaaaatggg 9615  T
Q  306 tagtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  9616 tagtttgtaaattatgctcaattagtgacttatgcatggttgttgatgaattgtgataagtttcatgat 9684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 9718 - 9789
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  9718 gatgctaattcatggcttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggttt 9789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 190 - 75
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  190 ttgatgataattcatggcttgggtttgcatgattcatgattgttgctgagaaatgagttgttgttgttggttttgtaaaatgggttgataatgaagaagt 91  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  90 ttgattttgatgatgt 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 278 - 222
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  278 tatgctcaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 1828 - 1701
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  1828 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaag 1729  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  1728 gtaagggggttagtgttcatcataatca 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 409 - 502
Target Start/End: Complemental strand, 1427 - 1332
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggttgataatga 502  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||| || ||||||||||||| ||||    
T  1427 ttgatgataaatcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtgttttggtgaaaatgggttgattatga 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 100; Significance: 3e-49; HSPs: 4)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 25004 - 24890
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25004 ttgatgataattcatggcttgggtt-gcatgattcatgattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaagt 24906  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  24905 ttgattttgatgatgt 24890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 455
Target Start/End: Complemental strand, 25257 - 25212
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgtt 455  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  25257 ttgatgataattcatggcttggg-ttgcatgattcatgattgttgtt 25212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 25092 - 25040
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttca 370  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||| ||||||    
T  25092 tatgctcaattggtgaattatgttttgttgttgttgaattgtgataagtttca 25040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 25345 - 25293
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttca 370  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||| ||||||    
T  25345 tatgctcaattggtgaattatgttttgttgttgttgaattgtgataagtttca 25293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 97; Significance: 2e-47; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 21558 - 21442
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaag 507  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21558 ttgatgataattcatggcttgggtttgcatgattcatgaattgttgttaagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaag 21459  T
Q  508 tttgaatttgatgatgt 524  Q
    ||||| |||||||||||    
T  21458 tttgattttgatgatgt 21442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 409 - 524
Target Start/End: Complemental strand, 31257 - 31141
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaag 507  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  31257 ttgatgataattcatggcttgggtttgcatgattcatgaattgttgttgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaaaaag 31158  T
Q  508 tttgaatttgatgatgt 524  Q
    ||||| |||||||||||    
T  31157 tttgattttgatgatgt 31141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 21646 - 21588
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgatta 376  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||    
T  21646 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgatta 21588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 31345 - 31292
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcat 371  Q
    |||||||||||||| |||||| |   |||||||||||||||||||| |||||||    
T  31345 tatgctcaattggtaaattatactatgttgttgatgaattgtgataagtttcat 31292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 96; Significance: 8e-47; HSPs: 4)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 315 - 430
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagt 508  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  315 ttgatgataattcatagcttgggtttgcatgattcatgattgttgttgagaaatgagcttttgttggtggttttgtaaaatgggttgataatgaagaagt 414  T
Q  509 ttgaatttgatgatgt 524  Q
    |||| |||||||||||    
T  415 ttgattttgatgatgt 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6208 - 6335
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  6208 agaacaagggttagagagaagatgaacttgaagaattcaagggtttgaataatcataggagcaaaagtgaagcttgagttaatagtgggtgataattaag 6307  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  6308 gtaagggggttagtgttcatcataatca 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 448 - 524
Target Start/End: Original strand, 6603 - 6679
Alignment:
Q  448 ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6603 ttgttgttgagaattgagttgttcttggtggttttgtaaaatgggttgataatgaagaagtttgattttgatgatgt 6679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 1 - 41
Alignment:
Q  88 ggtgataattaaggtaagggggttagtttttatcataatca 128  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  1 ggtgataattaaggtaagggggttagtgttcatcataatca 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 96; Significance: 8e-47; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19754 - 19881
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  19754 agaacaagggttagagagaagaggagcttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaag 19853  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  19854 gtaagggggttagtgttcatcataatca 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 24058 - 24185
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  24058 agaacaagggttagagagaagaggagcttgaagaattcaagggtttgaagaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaag 24157  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  24158 gtaagggggttagtgttcatcataatca 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 24398 - 24471
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  24398 ttgatgataattcatgtcttgggtttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttt 24471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 221 - 94
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| |||| |||||||||||||||||||||    
T  221 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaataatcattggagcaaaagtgaagcttgagttaatagttggtgataattaag 122  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  121 gtaagggggttagtgttcatcataatca 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 15271 - 15398
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||||||||||    
T  15271 agaacaagggttagagagaagaggaacttgaagaattcaagggtttgaagaatcataggagcaaaagtgaagcttgggctaatagttggagataattaag 15370  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||  || ||||||||||    
T  15371 gtaagggggttagcattcatcataatca 15398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 15584 - 15640
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15584 tatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 15640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 493
Target Start/End: Original strand, 15677 - 15761
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    |||| ||||||||||||||||| |||||||||||| | || |||||||||||| | ||||||| | |||||| || |||||||||    
T  15677 gatgctaattcatggcttgggtatgcatgattcataattttttgttgagaaataaattgttgttgttggtttggtgaaaatgggt 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 36836 - 36869
Alignment:
Q  96 ttaaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| ||||||||||||||    
T  36836 ttaaggtaagggggttagtctttatcataatcat 36869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 20620 - 20493
Alignment:
Q  1 agaactaggggtagagagaagaggaacttgaagaattcaagggtttgaagaatcataagagcaaaagtgaagcatgagctaatagttggtgataattaag 100  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  20620 agaacaagggttagagagaagaggagcttgaagaattcaagggtttgaagaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaag 20521  T
Q  101 gtaagggggttagtttttatcataatca 128  Q
    |||||||||||||| || ||||||||||    
T  20520 gtaagggggttagtgttcatcataatca 20493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 206 - 374
Target Start/End: Complemental strand, 95225 - 95053
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||||||| |     
T  95225 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaataga 95126  T
Q  306 tagttt----gtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  95125 tagtttatttgtaaattatgctcaattagtgaattatgcatggttgttgatgaattgtgataagtttcatgat 95053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 24841 - 24897
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  24841 tatgctcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 24897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 95019 - 94948
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| |||||||||| |||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  95019 gatgctaattcatggtttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggttt 94948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 418 - 524
Target Start/End: Complemental strand, 28573 - 28466
Alignment:
Q  418 attcatggcttgggtttgcatgattcatgattg-ttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttgataatgaagaagtttgaattt 516  Q
    ||||||||||||||| | ||| ||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  28573 attcatggcttgggtgttcataattcatgatttattggtgagaaatgagttgttgttggtggttttgtaaaatgggttgataatgaagaagtttgatttt 28474  T
Q  517 gatgatgt 524  Q
    ||||||||    
T  28473 gatgatgt 28466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 524
Target Start/End: Complemental strand, 21687 - 21637
Alignment:
Q  474 ggtggttttgtaaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21687 ggtggttttgtaaaatgggttgataatgaagaagtttgattttgatgatgt 21637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 93 - 337
Target Start/End: Original strand, 3732 - 3981
Alignment:
Q  93 taattaaggtaagggggttagtttttat-cataatcatttagttaattctttttctcttgttctattcataattgattatgagaataagtgaatatcatg 191  Q
    ||||| |||||| |||||||| ||| |  |||||||| ||||||| ||  || |||||| |||||| ||||| || ||||  |||||||||| |||  ||    
T  3732 taattgaggtaaaggggttagatttcaagcataatcacttagttagtttcttctctctttttctatgcataagtgcttatttgaataagtgattattgtg 3831  T
Q  192 aacccaatctttggaattcgtgcttatgttgtagagatat----gtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttc 287  Q
    || ||||  |||| |||||||||| ||||||||| |||||    ||||||  |||||||||||||| | | ||||||||| ||||| |||||||| ||||    
T  3832 aaaccaacttttgaaattcgtgctcatgttgtagtgatatatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttc 3931  T
Q  288 atgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatta 337  Q
    ||||| |||  ||||||||||||||| ||||||| ||||||| |||||||    
T  3932 atgatatatataaatgggtagtttgtgaattatgttcaattgatgaatta 3981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 6129 - 5996
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    |||| ||||| ||||||||| |||||||||||  ||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||| || | |||||||    
T  6129 aatttgtgctcatgttgtagtgatatgtttgagtatgttaaattgatgataattgaattgttgatgatgaaattgcatgttcatgatataagtaaatggg 6030  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||| |||| |||||||||| ||| |||||    
T  6029 tagtttgtgaattgtgctcaattgatgatttatg 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 56; Significance: 6e-23; HSPs: 4)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 32363 - 32281
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  32363 tgtatgaaaatgggtatgtttgaaaat-atgctcaattggtgaattatgaattgttgttgatgaattgtgatatgtttcatgat 32281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 41940 - 42022
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  41940 tgtatgaaaatgggtatgtttg-aaaatatgctcaattggtgaattatgaattgttgttgatgaattgtgatatgtttcatgat 42022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 32249 - 32180
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| || | | | |||||||||||||||||| |||||| ||||    
T  32249 ttgatgataattcatggcttgggtttgcataatccttggtttgttgttgagaaatgagatgttgttggtg 32180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 42054 - 42123
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| || | | | |||||||||||||||||| |||||| ||||    
T  42054 ttgatgataattcatggcttgggtttgcataatccttggtttgttgttgagaaatgagatgttgttggtg 42123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 15034 - 14952
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15034 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgatatgtttcatgat 14952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14263 - 14194
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattc-atgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| ||||   | |||||||||||||||||| |||||| ||||    
T  14263 ttgatgataattcatggcttgggtttgcataattctcggtttgttgttgagaaatgagatgttgttggtg 14194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 14923 - 14854
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattc-atgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||||||||||||||||| ||||   | |||||||||||||||||| |||||| ||||    
T  14923 ttgatgataattcatggcttgggtttgcataattctcggtttgttgttgagaaatgagatgttgttggtg 14854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 339
Target Start/End: Complemental strand, 17962 - 17812
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  17962 atgaacccaatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 17863  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    | ||||||||||||||||||||   |||||||||| ||||| |||||||||    
T  17862 taatgtatgaaaatgggtagttgtgaaattatgcttaattgatgaattatg 17812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 292 - 477
Target Start/End: Original strand, 6932 - 7118
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgattaatgnnnnnnnnnnn 390  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||                
T  6932 tgtatgaaaatgggta-tgtgtgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgatcaattgttgttgttgt 7030  T
Q  391 nnnnnnntagtcatatgtttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
           ||||||| |  |||||||||||||||||||||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  7031 tgttgtttagtcatgttgttgatgataattcatggcttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 1023 - 1092
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  1023 ttgatgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 935 - 991
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||    
T  935 tatgctcaattggtgaattatgcattgttattgatgatttgtgataagtttcatgat 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 9083 - 9156
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  9083 ttgatgataattcatggcttaggtatgcatgattcatgatttgttgttgagaaatgagatgttgtcggtggttt 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 5359 - 5415
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  5359 tatgctcaattggtgaattaggcattgttgttgatgaattgtgatatgtttcatgat 5415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 5447 - 5516
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  5447 ttgatgataattcatggtttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 5516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 9033 - 8960
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||    
T  9033 ttgatgataattcatggcttgggtttgcttgattcatgatttgttgttgagaaatgagatgttgttggtggttt 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 9121 - 9069
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttca 370  Q
    |||||||||||||||||||||||   ||||||||||| |||||||| ||||||    
T  9121 tatgctcaattggtgaattatgctatgttgttgatgatttgtgataagtttca 9069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 9e-22; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 109663 - 109736
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  109663 ttgatgataattcatggcttgggattgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 109736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 118164 - 118237
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  118164 ttgatgataattcatggcttggggttgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 118237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 118076 - 118132
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  118076 tatgttcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 118132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 109582 - 109631
Alignment:
Q  325 aattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  109582 aattggtgaattatgctaagttgttgatgaattgtgataagtttcatgat 109631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 254900 - 254983
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  254900 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 254983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 261506 - 261589
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  261506 tgtatgaaaatgggtatgtgttgaaaatatgctcaattggtgaattatgcattgttgttgatgaattgtgataagtttcatgat 261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 255015 - 255084
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  255015 ttgatgataattcatggcttgagtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 255084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 261621 - 261690
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  261621 ttgatgataattcatggcttgagtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 777 - 846
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||    
T  777 ttgatgataattcatggcttgggttggcatgattcatgatttgttgttgagaaatgagatgttgttggtg 846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 689 - 745
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| ||||||||||||||   |||||||||||||||||||| ||||||||||    
T  689 tatgctcatttggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 719 - 788
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| ||||    
T  719 ttgatgataattcatggcttgggttggcatgattcatgatttgttgttgagaaatgagatgttgttggtg 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 631 - 687
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| ||||||||||||||   |||||||||||||||||||| ||||||||||    
T  631 tatgctcatttggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 31091 - 31010
Alignment:
Q  408 tttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||| ||| ||||||    
T  31091 tttgatgataatttatggcttgggtatgcatgattcatgacttgttgttgagaaatgagatgttgttggtgttttggtaaaa 31010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 70748 - 70691
Alignment:
Q  318 tatgctcaattggt-gaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| ||||||| ||||||||| | ||||||| |||||||||||| ||||||||||    
T  70748 tatgcttaattggttgaattatgctttgttgttgttgaattgtgataagtttcatgat 70691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 97403 - 97487
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||| ||||||||| ||| | |||||||| | || | |||| |||||||||||   |||||||||||||||||||||    
T  97403 tgatgattcatgccttgggttttcataaatcatgatttgatgataagaattgagttgttgttattggttttgtaaaatgggttga 97487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 477
Target Start/End: Original strand, 112747 - 112812
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  112747 tgataattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttgttggtg 112812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 496
Target Start/End: Original strand, 103123 - 103211
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||||| ||| |||||||||||||| ||||  |||||||||||||||||    
T  103123 ttgatgataattcatggtttgggtgtgcataattcatgaattgttggtgataaatgagttgttgttggtgactttgtaaaatgggttga 103211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 109636 - 109556
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||| ||||||||||| |||||| ||| |||| ||||||    
T  109636 ttgatgataattcatggcttgggtatgcacgattcatgatttgttgatgagaaatgagatgttgttggtagtttggtaaaa 109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 112658 - 112714
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||| |||||||||||   || ||||||||||||||||| ||||||||||    
T  112658 tatgctcaattagtgaattatgctatgtggttgatgaattgtgataagtttcatgat 112714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 11733 - 11660
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  11733 ttgatgataattcatggcttggttatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 11660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 132363 - 132419
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  132363 tatgctcaattggtgaattatgcatcgttgttgatgaattgtgataagtttcatgat 132419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 132451 - 132520
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  |||||| ||||    
T  132451 ttgatgataattcatggcttgggtttgcatgattcatggtttgttgttgagaaatgaaatgttgttggtg 132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 88409 - 88353
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||||||   |||||||||||||||||||| ||||||||||    
T  88409 tatgatcaattggtgaattatgctatgttgttgatgaattgtgataagtttcatgat 88353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 9983 - 9903
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||| ||| ||||||    
T  9983 ttgatgattattcatggcttgggtttgcatgattcatgatttgttgtggagaaatgagatgttgttggtgttttggtaaaa 9903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 10071 - 10015
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  10071 tatgctcaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 10015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 409 - 471
Target Start/End: Complemental strand, 1363 - 1300
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttg 471  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  1363 ttgatgatcattcatggcttgggtttgcatgattcatgatttgttgttgagaaatgagatgttg 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 11740 - 11823
Alignment:
Q  292 tgtatgaaaatgggta-gtttgtaaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| || |  ||| ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||    
T  11740 tgtatgaaaatgggtatgtgttgaaaatatgctcaattagtgaattatgcattgttgttgatgaattgtgaaaagtttcatgat 11823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 1451 - 1395
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  1451 tatgcttaattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 470
Target Start/End: Original strand, 11909 - 11970
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgtt 470  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||    
T  11909 ttgatgataattcatggcttgagtttgcatggttcatgattggtgttgagaaatgagatgtt 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 11821 - 11877
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  11821 tatgctcaattggtgaattatgcattgttgttgatgaattttgataagtttcatgat 11877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 85378 - 85321
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgag 465  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  85378 ttgatgataattcatggtttgggtttgcatgattcatgatttgttgttgagaaatgag 85321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 159348 - 159275
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||  |||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  159348 ttgatgataatttttggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtggttt 159275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 85466 - 85410
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  85466 tatgcttaattggtgaattatgctaggttgttgatgaattgtgataagtttcatgat 85410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 159438 - 159377
Alignment:
Q  314 aaattatgctcaattggt-gaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||| |||||||||   |||| || |||||||||||| ||||||||||    
T  159438 aaattatgctcaattggttgaattatgctatgttgatgttgaattgtgataagtttcatgat 159377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 489
Target Start/End: Original strand, 253190 - 253271
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| |||||||||  ||||||| ||||||||||| ||||    
T  253190 ttgatgataattcaaggcttgggtttgcatgattcatgatttcttgatgagaaatggattgttgttggtggttttgtgaaat 253271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 253102 - 253158
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||| |||| | ||||||| |||||||||||| ||||||||||    
T  253102 tatgctcaattggtgaatcatgctttgttgttgttgaattgtgataagtttcatgat 253158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 247366 - 247398
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  247366 taaggtaagggggttagtctttatcataatcat 247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 22737 - 22668
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||| ||||    
T  22737 ttgatgataattcatggcttgggtttgcatgattcatggtttgttattgagaaatgagatgttgttggtg 22668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 22825 - 22769
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  22825 tatgctcaattggtgaattatgcatttttgttgatgaattgtgataagtttcatgat 22769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 128095 - 128127
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  128095 taaggtaagggggttagtctttatcataatcat 128127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 5e-17; HSPs: 7)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 70823 - 70892
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| |||||| ||||    
T  70823 ttgatgataattcatgacttgggtttgcatgattcatggtttgttgttgagaaatgagatgttgttggtg 70892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 60852 - 60784
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||| |||||| ||||    
T  60852 ttgatgataattcatgacttgggtttgcatgattcatgatttgtgtggagaaatgagatgttgttggtg 60784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 70735 - 70791
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  70735 tatgctcaattggtgaattatgcattattgttgatgaattgtgataagtttcatgat 70791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 164974 - 165107
Alignment:
Q  206 aattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatggg 305  Q
    ||||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||    
T  164974 aattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggg 165073  T
Q  306 tagtttgtaaattatgctcaattggtgaattatg 339  Q
    |  ||   |||||||||| ||||| |||||||||    
T  165074 ttcttatgaaattatgcttaattgatgaattatg 165107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 60933 - 60884
Alignment:
Q  325 aattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  60933 aattggtgaattatgctttgttgttgttgaattgtgataagtttcatgat 60884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 172242 - 172210
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  172242 taaggtaagggggttagtctttatcataatcat 172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 177945 - 177913
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  177945 taaggtaagggggttagtctttatcataatcat 177913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 38432 - 38376
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  38432 tatgctcaattggcgaattatgcattgttgttgatgaattgtgataagtttcatgat 38376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 38344 - 38287
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgag 465  Q
    |||||||||||||||  |||||||||||||||||||| | ||||||||||||||||||    
T  38344 ttgatgataattcataacttgggtttgcatgattcatggtttgttgttgagaaatgag 38287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 146735 - 146679
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  146735 tatgctcaattggtgaattatgctaggttgttgatgaattgtgataagtttcatgat 146679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 493
Target Start/End: Complemental strand, 146640 - 146561
Alignment:
Q  416 taattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgt-aaaatgggt 493  Q
    ||||||||||||||||| |||||||||||| | ||||| ||| ||||| ||||||||| | |||||| || |||||||||    
T  146640 taattcatggcttgggtatgcatgattcataatttgtttttgtgaaataagttgttgttgttggtttggtgaaaatgggt 146561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 146938 - 146906
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  146938 taaggtaagggggttagtctttatcataatcat 146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 4445 - 4363
Alignment:
Q  292 tgtatgaaaatgggtagtttgt-aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  4445 tgtatgaaaatgggta-tgtgtgaaaatatgttcaattggtgaattatgcattgttgttgatgaattgtgataagttttatgat 4363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 4353 - 4284
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcat-gattgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||| |||||||||||| |||| | | |||||||||||||||||| |||||| ||||    
T  4353 ttgatgataattcatggtttgggtttgcataattcttggtttgttgttgagaaatgagatgttgttggtg 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 7878 - 7807
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||| ||||    
T  7878 gatgttaattcatggcttgggtatgcatgattcatgatttgttgttgagaaatgagatgttgttggtagttt 7807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 336
Target Start/End: Complemental strand, 5485 - 5338
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||| | ||||||||  |||| | | |||| ||||||  |||||||||   || |||||||||||||| |||| ||||  || |||||    
T  5485 atgaacccaatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgattgataaatgaattgttggtgatgaaataacatgttca 5386  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
    | |||||||||||||||| |||   |||||||||| ||||| ||||||    
T  5385 taatgtatgaaaatgggttgttatgaaattatgcttaattgatgaatt 5338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 493
Target Start/End: Complemental strand, 6708 - 6622
Alignment:
Q  408 tttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggt 493  Q
    |||| |||| |||||||||||||||   ||| |||||||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  6708 tttgttgatgattcatggcttgggtggtcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaactgggt 6622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 339
Target Start/End: Original strand, 5580 - 5722
Alignment:
Q  197 aatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtat 296  Q
    |||||||| | ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| ||||||    
T  5580 aatctttgaatttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtat 5679  T
Q  297 gaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||| ||||  |||||||||| ||||  |||||||||    
T  5680 gaaaatgggttgttttgaaattatgcttaattaatgaattatg 5722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 493
Target Start/End: Original strand, 5823 - 5875
Alignment:
Q  442 tcatgattgttgttgagaaatgagttgttgtcggtggttttgta-aaatgggt 493  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||| ||||||||    
T  5823 tcatgattgttggtgagaaatgagatgttgttggttgttttgtataaatgggt 5875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 362
Target Start/End: Original strand, 61218 - 61391
Alignment:
Q  189 atgaacccaatctttggaattcgtgcttatgttgtagagatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttca 288  Q
    |||||||||||||||    ||||||||  |||| | | |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||    
T  61218 atgaacccaatctttaattttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttca 61317  T
Q  289 tgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg-catggttgttgatgaattgtgat 362  Q
    | |||||||||||||||| |||   |||||||||| ||||| ||| ||||| ||| ||||||| |||||||||||    
T  61318 taatgtatgaaaatgggttgttgtgaaattatgcttaattgatgacttatgacat-gttgttgttgaattgtgat 61391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 48935 - 48903
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  48935 taaggtaagggggttagtctttatcataatcat 48903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 153924 - 153956
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  153924 taaggtaagggggttagttattatcataatcat 153956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 481
Target Start/End: Complemental strand, 3565 - 3492
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||   |||||| ||||||||    
T  3565 ttgatgataattcatggcttgggtttgcatgtttcattatttgttgttgagaaatggaatgttgttggtggttt 3492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 472
Target Start/End: Complemental strand, 67 - 3
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgt 472  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||  |||||||    
T  67 ttgatgataattcatggcttgggtttgcatgtttcattatttgttgttgagaaatggattgttgt 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 155 - 99
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||| |||||||||||   || ||||||||||||||||| ||||||||||    
T  155 tatgctcaattcgtgaattatgctacgtggttgatgaattgtgataagtttcatgat 99  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 77052 - 77129
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||||| |||| |||||||||||||||||| ||||||||||| ||||    
T  77052 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtgaaat 77129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 1961 - 1889
Alignment:
Q  410 tgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||||| ||||||  |||||||    
T  1961 tgatgataattcttggcttgagtatgcatgattcatgatttgttgttgagaaatgagatgttgttagtggttt 1889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 7703 - 7647
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  7703 tatgctcaattggtgaattatgcattgttgttgataaattatgataagtttcatgat 7647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 7615 - 7556
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgtt 470  Q
    |||||||||||||||||||||||||||||||||||  | | |||||||||||||||| ||||    
T  7615 ttgatgataattcatggcttgggtttgcatgattc--gttggttgttgagaaatgagatgtt 7556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 34442 - 34554
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||| |||||||||||||||   |||||||||| ||    
T  34442 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtgtgaaaatgggtagttgtgaaattatgcttaa 34541  T
Q  327 ttggtgaattatg 339  Q
    ||| |||||||||    
T  34542 ttgatgaattatg 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 11769 - 11837
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatgattgttgttgagaaatgagttgttgtcggtg 477  Q
    |||||||||||||||| ||||||||||||| ||||||||||  ||| |||||||||| |||||| ||||    
T  11769 ttgatgataattcatgacttgggtttgcataattcatgatttgtgtggagaaatgagatgttgttggtg 11837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 11681 - 11737
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||  ||||||||||    
T  11681 tatgcttaattggtgaattatgctttgttgttgttgaattgtgatcagtttcatgat 11737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 33929 - 34008
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaa 488  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||| |||||| ||| |||| ||||||    
T  33929 ttgataataattcatggcttgggtatgcatgatt-atgatttgttgttgagaaatgagatgttgttggtagtttggtaaaa 34008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 496
Target Start/End: Original strand, 44003 - 44087
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||||||||||||||| | |||||||||||||||||||||    
T  44003 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaaatgagttgttgttgttggttttgtaaaatgggttga 44087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 3363 - 3308
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgag 465  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  3363 gatgttaattcatggcttgggtatgcatgattcatgatttgttgttgagaaatgag 3308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 493
Target Start/End: Complemental strand, 356 - 270
Alignment:
Q  408 tttgatgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggt 493  Q
    |||| |||| ||||||| |||||||   ||| |||||||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  356 tttgttgattattcatgccttgggtgctcataattcatgatttgttgatgagaaatgagttgttgttggtggttttgtaaactgggt 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 521
Target Start/End: Original strand, 12990 - 13048
Alignment:
Q  464 agttgttgtcggtggttttgt-aaaatgggttgataatgaagaagtttgaatttgatga 521  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  12990 agttgttgttgatggttttgtgaaaatgggttgataatgaagaagtttgattttgatga 13048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 48286 - 48225
Alignment:
Q  313 taaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||||||||||  | |||||||||||||||||| | ||||||||||    
T  48286 taaaatatgctcaattggtgaattatgttttgttgttgatgaattgtgaaaagtttcatgat 48225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 61734 - 61673
Alignment:
Q  313 taaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||| ||||||||||||||||||||||  | |||||||||||||||||| | ||||||||||    
T  61734 taaaatatgctcaattggtgaattatgttttgttgttgatgaattgtgaaaagtttcatgat 61673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 48193 - 48124
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||| |||||| ||||||||  ||||| | |||||||||| |||||| ||||    
T  48193 ttgatgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtg 48124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 61641 - 61572
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga--ttgttgttgagaaatgagttgttgtcggtg 477  Q
    ||||||||||||||||||||||| |||||| ||||||||  ||||| | |||||||||| |||||| ||||    
T  61641 ttgatgataattcatggcttggg-ttgcataattcatgattttgttatggagaaatgagatgttgttggtg 61572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 489
Target Start/End: Complemental strand, 35520 - 35444
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||| ||||||||||||||| | ||| |||||||| |||||| |||||||||||||| ||| ||||||||||||||||    
T  35520 tgatgattcatggcttgggtattcataattcatgatttgttgatgagaaatgagttg-tgttggtggttttgtaaaat 35444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 35922 - 35816
Alignment:
Q  7 aggggtagagagaagaggaacttgaagaattcaagggtttgaaga-atcataagagcaaaagtgaagcatgagctaatagttggtgataattaaggtaag 105  Q
    |||| ||||||||||| || |||||||| ||||||  || ||||| ||| || |||| |||||||||| || ||||  | ||||||||||||||||||||    
T  35922 agggttagagagaagaagagcttgaaga-ttcaagaattggaagagatcctaggagctaaagtgaagcttgggctaggaattggtgataattaaggtaag 35824  T
Q  106 ggggttag 113  Q
    ||||||||    
T  35823 ggggttag 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 11970 - 11862
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||| |||||||||||||||   |||||||||| ||    
T  11970 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtttgaaaatgggtagttgtgaaattatgcttaa 11871  T
Q  327 ttggtgaat 335  Q
    ||| |||||    
T  11870 ttgatgaat 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 6885 - 6934
Alignment:
Q  64 aaagtgaagcatgagctaatagttggtgataattaaggtaagggggttag 113  Q
    |||||||||| || ||||  | ||||||||||||||||||||||||||||    
T  6885 aaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 26340 - 26372
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  26340 taaggtaagggggttagtctttatcataatcat 26372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 49877 - 49989
Alignment:
Q  227 gatatgtttgaacatgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 326  Q
    |||| ||||||  |||||||||  ||| |||||||||||||| |||| ||||  || ||||||  |||||||||||||||||||   ||||||| || ||    
T  49877 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcatagtgtatgaaaatgggtagttgtgaaattatacttaa 49976  T
Q  327 ttggtgaattatg 339  Q
    ||| |||||||||    
T  49977 ttgatgaattatg 49989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 17356 - 17478
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| | |   |||||||||| ||||| ||| |||||    
T  17356 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgctgtgaaattatgcttaattgatgacttatg 17455  T
Q  340 -catggttgttgatgaattgtgat 362  Q
     ||| ||||||| |||||||||||    
T  17456 acat-gttgttgttgaattgtgat 17478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 489
Target Start/End: Complemental strand, 1422 - 1364
Alignment:
Q  432 tttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||||||||||| ||||||||||||||  ||||||| ||||||||||| ||||    
T  1422 tttgcatgattcatgatttgttgttgagaaatggattgttgttggtggttttgtgaaat 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 489
Target Start/End: Complemental strand, 4987 - 4906
Alignment:
Q  409 ttgatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttttgtaaaat 489  Q
    |||||||||||||||||||||| | | ||| |||||||| ||| || |||||||||  ||||||| ||||||||||| ||||    
T  4987 ttgatgataattcatggcttggttgttcataattcatgatttgctgatgagaaatggattgttgttggtggttttgtgaaat 4906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 5075 - 5019
Alignment:
Q  318 tatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||| |||||||||||||||  | ||||||| |||||||||||| ||||||||||    
T  5075 tatgcttaattggtgaattatgatttgttgttgttgaattgtgataagtttcatgat 5019  T

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Target: scaffold0103 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 374
Target Start/End: Complemental strand, 33800 - 33740
Alignment:
Q  314 aaattatgctcaattggtgaattatgcatggttgttgatgaattgtgatatgtttcatgat 374  Q
    |||||||| | ||||||||||||||||   |||||||||||||| ||||| ||||||||||    
T  33800 aaattatgtttaattggtgaattatgctatgttgttgatgaattttgataagtttcatgat 33740  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 524
Target Start/End: Complemental strand, 12734 - 12694
Alignment:
Q  484 taaaatgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  12734 taaaatgggttgatagtgaagaagtttgattttgatgatgt 12694  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 69499 - 69415
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| ||||||||||||||| | ||| | |||||||| | || |||||| |||| |||||| | |||||||||||||||||||||    
T  69499 tgatgattcatggcttgggtgttcataaatcatgatttgatgatgagaattgaggtgttgttgttggttttgtaaaatgggttga 69415  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 272362 - 272330
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  272362 taaggtaagggggttagtctttatcataatcat 272330  T

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Target: scaffold0615 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 6258 - 6357
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaattatg 339  Q
    |||||||||  ||| |||||||||||||| |||| ||||  || |||||| |||||||||||||||| |||   |||||| ||| ||||| ||| |||||    
T  6258 atgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattaagcttaattgatgacttatg 6357  T

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Target: scaffold0244 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 22715 - 22786
Alignment:
Q  411 gatgataattcatggcttgggtttgcatgattcatga-ttgttgttgagaaatgagttgttgtcggtggttt 481  Q
    |||| |||||||||| |||||| |||||||||||| | ||||||||| ||||| ||||||||| | ||||||    
T  22715 gatgctaattcatggtttgggtatgcatgattcataatttgttgttgtgaaataagttgttgttgttggttt 22786  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 524
Target Start/End: Original strand, 3392 - 3427
Alignment:
Q  489 tgggttgataatgaagaagtttgaatttgatgatgt 524  Q
    |||||||||||||||||||||||| |||||||||||    
T  3392 tgggttgataatgaagaagtttgattttgatgatgt 3427  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 5990 - 6024
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcattt 131  Q
    |||||||||||||||||| ||||||||||||||||    
T  5990 taaggtaagggggttagtctttatcataatcattt 6024  T

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Target: scaffold0058 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 57392 - 57426
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcattt 131  Q
    |||||||||||||||||| ||||||||||||||||    
T  57392 taaggtaagggggttagtctttatcataatcattt 57426  T

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Target: scaffold1500 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 1431 - 1463
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  1431 taaggtaagggggttagttattatcataatcat 1463  T

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Target: scaffold0761 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 1492 - 1524
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  1492 taaggtaagggggttagttattatcataatcat 1524  T

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Target: scaffold0700 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 2567 - 2483
Alignment:
Q  413 tgataattcatggcttgggtttgcatgattcatgatt-gttgttgagaaatgagttgttgtcggtggttttgtaaaatgggttga 496  Q
    |||| |||||||| |||||| | ||| | |||||||| | || |||||||||| ||||||| | ||||||| |||||||||||||    
T  2567 tgatgattcatggtttgggtgttcataaatcatgatttgatgatgagaaatgacttgttgttgttggttttctaaaatgggttga 2483  T

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Target: scaffold0498 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 9215 - 9183
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  9215 taaggtaagggggttagtctttatcataatcat 9183  T

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Target: scaffold0383 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 2732 - 2700
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    ||||||||||||||||||| |||||||||||||    
T  2732 taaggtaagggggttagttattatcataatcat 2700  T

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Target: scaffold0317 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 12638 - 12734
Alignment:
Q  240 atgttaatttgatgttaaatgaattgttgatgatcaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggtgaatt 336  Q
    ||||||| ||| || ||| |||||| |||||||| |||||||| ||||||| | |||  |||||  || ||  ||||||||||||||||| ||||||    
T  12638 atgttaacttgttgataattgaattattgatgatgaaattgcatgttcatgttatatataaatgaataattgataaattatgctcaattgatgaatt 12734  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 12450 - 12418
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  12450 taaggtaagggggttagtctttatcataatcat 12418  T

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Target: scaffold0266 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 1462 - 1430
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  1462 taaggtaagggggttagtctttatcataatcat 1430  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 22889 - 22857
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  22889 taaggtaagggggttagtctttatcataatcat 22857  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 27144 - 27112
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  27144 taaggtaagggggttagtctttatcataatcat 27112  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 1496 - 1528
Alignment:
Q  97 taaggtaagggggttagtttttatcataatcat 129  Q
    |||||||||||||||||| ||||||||||||||    
T  1496 taaggtaagggggttagtctttatcataatcat 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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