View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20962_low_11 (Length: 396)

Name: NF20962_low_11
Description: NF20962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20962_low_11
NF20962_low_11
[»] chr2 (41 HSPs)
chr2 (181-380)||(5559748-5559947)
chr2 (17-179)||(5559562-5559724)
chr2 (27-117)||(38982998-38983087)
chr2 (51-103)||(32457226-32457278)
chr2 (27-110)||(30758726-30758808)
chr2 (37-103)||(12962775-12962840)
chr2 (27-103)||(35728477-35728553)
chr2 (27-103)||(10204986-10205061)
chr2 (51-107)||(28248942-28248998)
chr2 (27-102)||(7943453-7943527)
chr2 (28-98)||(3837428-3837497)
chr2 (27-117)||(4410776-4410865)
chr2 (51-117)||(12873806-12873872)
chr2 (27-117)||(34447503-34447591)
chr2 (51-108)||(28494787-28494844)
chr2 (34-99)||(41153128-41153192)
chr2 (51-103)||(29988975-29989027)
chr2 (51-90)||(5281204-5281243)
chr2 (51-118)||(38554456-38554523)
chr2 (51-117)||(22333524-22333590)
chr2 (51-101)||(32487073-32487123)
chr2 (27-105)||(33273981-33274058)
chr2 (51-103)||(11030205-11030257)
chr2 (51-103)||(28014356-28014408)
chr2 (51-110)||(11182171-11182230)
chr2 (51-118)||(30761461-30761528)
chr2 (51-102)||(33824433-33824484)
chr2 (51-118)||(39445078-39445145)
chr2 (51-103)||(2936376-2936428)
chr2 (118-170)||(22651093-22651145)
chr2 (51-102)||(5109446-5109497)
chr2 (27-117)||(9152378-9152467)
chr2 (51-117)||(11794532-11794598)
chr2 (116-174)||(34504257-34504315)
chr2 (116-178)||(41542760-41542822)
chr2 (27-88)||(920474-920534)
chr2 (51-103)||(29169848-29169901)
chr2 (51-116)||(43135106-43135171)
chr2 (119-179)||(2080529-2080589)
chr2 (115-179)||(12972709-12972773)
chr2 (51-103)||(36881610-36881662)
[»] chr6 (20 HSPs)
chr6 (27-110)||(30627883-30627965)
chr6 (27-117)||(3064943-3065032)
chr6 (27-102)||(9077646-9077720)
chr6 (27-117)||(28863380-28863469)
chr6 (51-101)||(12450434-12450484)
chr6 (51-103)||(17265734-17265786)
chr6 (51-102)||(30895267-30895318)
chr6 (51-117)||(33119903-33119969)
chr6 (27-100)||(2972224-2972296)
chr6 (51-111)||(10283299-10283359)
chr6 (27-103)||(28630813-28630888)
chr6 (28-103)||(2937093-2937166)
chr6 (51-102)||(8052939-8052990)
chr6 (51-102)||(12999769-12999820)
chr6 (53-104)||(21162412-21162463)
chr6 (116-154)||(5051568-5051606)
chr6 (67-117)||(25538047-25538097)
chr6 (118-178)||(5456556-5456616)
chr6 (119-175)||(12217083-12217138)
chr6 (51-103)||(27909058-27909110)
[»] chr3 (24 HSPs)
chr3 (32-107)||(9197090-9197164)
chr3 (27-101)||(36985216-36985289)
chr3 (27-101)||(37010655-37010728)
chr3 (51-117)||(51517040-51517106)
chr3 (51-117)||(53441906-53441972)
chr3 (27-108)||(13622495-13622575)
chr3 (28-117)||(43449019-43449107)
chr3 (51-119)||(21662969-21663037)
chr3 (27-103)||(44518096-44518171)
chr3 (27-103)||(45010763-45010838)
chr3 (51-118)||(54537526-54537593)
chr3 (51-112)||(19649583-19649644)
chr3 (54-103)||(43343532-43343581)
chr3 (51-103)||(52865034-52865086)
chr3 (27-102)||(23222972-23223046)
chr3 (57-108)||(50354325-50354376)
chr3 (55-117)||(8266318-8266380)
chr3 (51-117)||(12064908-12064974)
chr3 (28-102)||(35099069-35099142)
chr3 (51-90)||(9236170-9236209)
chr3 (51-102)||(20028485-20028535)
chr3 (120-175)||(38672745-38672800)
chr3 (116-179)||(47495741-47495804)
chr3 (51-117)||(51723461-51723527)
[»] chr7 (32 HSPs)
chr7 (27-117)||(28677316-28677405)
chr7 (27-102)||(6838435-6838509)
chr7 (27-117)||(36245375-36245464)
chr7 (51-117)||(41850679-41850745)
chr7 (51-103)||(39153300-39153352)
chr7 (51-117)||(11668014-11668080)
chr7 (51-117)||(13807321-13807387)
chr7 (51-116)||(2680858-2680923)
chr7 (51-102)||(2399966-2400017)
chr7 (27-98)||(8566099-8566169)
chr7 (27-106)||(10462437-10462514)
chr7 (51-110)||(29365627-29365686)
chr7 (53-102)||(2523784-2523833)
chr7 (27-88)||(40142801-40142861)
chr7 (27-102)||(45533290-45533364)
chr7 (53-99)||(7456436-7456482)
chr7 (53-103)||(24163354-24163404)
chr7 (60-105)||(28298946-28298991)
chr7 (118-179)||(37708463-37708524)
chr7 (118-179)||(42121401-42121462)
chr7 (51-108)||(45441444-45441501)
chr7 (28-81)||(47987211-47987263)
chr7 (51-108)||(48082881-48082938)
chr7 (118-178)||(48723250-48723310)
chr7 (51-102)||(9979815-9979865)
chr7 (116-179)||(33645187-33645250)
chr7 (37-100)||(48838382-48838444)
chr7 (118-176)||(26715146-26715204)
chr7 (118-176)||(27772914-27772972)
chr7 (27-105)||(30869197-30869274)
chr7 (118-179)||(9658406-9658467)
chr7 (118-179)||(32802547-32802608)
[»] chr8 (22 HSPs)
chr8 (51-108)||(8793802-8793859)
chr8 (27-108)||(16448797-16448877)
chr8 (27-108)||(35149676-35149756)
chr8 (51-103)||(5031547-5031599)
chr8 (27-103)||(42122979-42123054)
chr8 (27-102)||(3236390-3236464)
chr8 (51-108)||(40483291-40483348)
chr8 (51-103)||(7693046-7693098)
chr8 (27-103)||(8803288-8803363)
chr8 (51-103)||(24618971-24619023)
chr8 (28-103)||(15726773-15726846)
chr8 (51-117)||(10839846-10839911)
chr8 (51-116)||(8453595-8453660)
chr8 (49-102)||(32597512-32597565)
chr8 (50-103)||(43332643-43332696)
chr8 (27-90)||(36191773-36191833)
chr8 (27-102)||(40651283-40651355)
chr8 (51-90)||(10184577-10184616)
chr8 (51-105)||(16008534-16008588)
chr8 (27-108)||(34711141-34711220)
chr8 (27-87)||(1223183-1223242)
chr8 (51-107)||(24821900-24821956)
[»] chr1 (32 HSPs)
chr1 (27-103)||(15342997-15343072)
chr1 (27-103)||(38737944-38738019)
chr1 (51-117)||(38040275-38040341)
chr1 (49-102)||(39748633-39748686)
chr1 (51-117)||(11386238-11386303)
chr1 (51-117)||(26924296-26924362)
chr1 (27-117)||(27819310-27819400)
chr1 (51-103)||(26760186-26760238)
chr1 (51-103)||(34332559-34332611)
chr1 (60-103)||(8971320-8971363)
chr1 (27-88)||(6661574-6661634)
chr1 (51-108)||(44939074-44939131)
chr1 (51-108)||(47912825-47912882)
chr1 (27-108)||(49944893-49944973)
chr1 (51-119)||(519830-519898)
chr1 (27-99)||(37178970-37179041)
chr1 (51-87)||(52427376-52427412)
chr1 (51-102)||(26070907-26070958)
chr1 (51-117)||(6793677-6793743)
chr1 (54-103)||(2351146-2351195)
chr1 (40-117)||(5891725-5891801)
chr1 (52-117)||(18744639-18744704)
chr1 (27-108)||(24305673-24305753)
chr1 (51-108)||(38590074-38590131)
chr1 (60-103)||(7375195-7375238)
chr1 (51-102)||(15286023-15286074)
chr1 (131-178)||(42728149-42728196)
chr1 (119-173)||(13771149-13771203)
chr1 (51-81)||(29256634-29256664)
chr1 (115-179)||(43949156-43949220)
chr1 (53-117)||(49944832-49944896)
chr1 (51-102)||(50155311-50155363)
[»] chr5 (21 HSPs)
chr5 (27-108)||(5002148-5002228)
chr5 (54-117)||(34297173-34297236)
chr5 (51-117)||(13789731-13789797)
chr5 (51-117)||(33478190-33478256)
chr5 (51-117)||(38394511-38394577)
chr5 (51-103)||(21488296-21488348)
chr5 (27-102)||(22101968-22102042)
chr5 (54-105)||(36286070-36286121)
chr5 (51-117)||(18473558-18473624)
chr5 (27-88)||(18391526-18391586)
chr5 (51-119)||(919639-919707)
chr5 (51-102)||(13664960-13665011)
chr5 (116-179)||(29429689-29429752)
chr5 (53-102)||(10228152-10228201)
chr5 (27-88)||(36434706-36434766)
chr5 (51-102)||(16619101-16619152)
chr5 (27-117)||(29299417-29299507)
chr5 (51-97)||(14221864-14221910)
chr5 (27-108)||(11932030-11932110)
chr5 (118-179)||(12289085-12289146)
chr5 (123-175)||(8234075-8234127)
[»] chr4 (38 HSPs)
chr4 (51-123)||(21554101-21554174)
chr4 (27-108)||(48195950-48196030)
chr4 (51-103)||(25477558-25477610)
chr4 (51-103)||(36132648-36132700)
chr4 (51-103)||(48361135-48361187)
chr4 (51-118)||(32714267-32714334)
chr4 (27-106)||(35429783-35429861)
chr4 (40-119)||(45828412-45828490)
chr4 (27-117)||(44111744-44111833)
chr4 (27-103)||(42670824-42670899)
chr4 (37-118)||(43117850-43117932)
chr4 (51-102)||(4386219-4386270)
chr4 (51-102)||(30191979-30192030)
chr4 (52-102)||(3162979-3163029)
chr4 (27-117)||(17284734-17284823)
chr4 (64-105)||(41328718-41328759)
chr4 (27-87)||(696379-696438)
chr4 (27-87)||(764677-764736)
chr4 (51-103)||(19150806-19150858)
chr4 (51-103)||(50121520-50121572)
chr4 (55-102)||(9044401-9044448)
chr4 (27-102)||(44061402-44061476)
chr4 (27-101)||(8347705-8347778)
chr4 (51-117)||(16412317-16412383)
chr4 (34-107)||(31977753-31977825)
chr4 (51-88)||(42169071-42169108)
chr4 (51-88)||(47943810-47943847)
chr4 (51-88)||(53225672-53225709)
chr4 (49-117)||(48361051-48361119)
chr4 (116-179)||(2549067-2549129)
chr4 (52-103)||(37991499-37991550)
chr4 (51-102)||(45096657-45096708)
chr4 (116-179)||(50685672-50685735)
chr4 (49-103)||(42169124-42169178)
chr4 (118-179)||(13529430-13529491)
chr4 (51-108)||(16412242-16412299)
chr4 (51-112)||(55951666-55951727)
chr4 (49-117)||(8347644-8347712)
[»] scaffold0123 (1 HSPs)
scaffold0123 (28-102)||(28101-28176)
[»] scaffold0136 (1 HSPs)
scaffold0136 (51-117)||(16612-16678)
[»] scaffold0236 (1 HSPs)
scaffold0236 (27-88)||(16679-16739)
[»] scaffold0001 (1 HSPs)
scaffold0001 (51-118)||(156766-156833)
[»] scaffold0006 (1 HSPs)
scaffold0006 (116-178)||(50604-50666)
[»] scaffold0110 (1 HSPs)
scaffold0110 (51-88)||(1561-1598)
[»] scaffold0086 (1 HSPs)
scaffold0086 (51-88)||(1520-1556)
[»] scaffold0028 (1 HSPs)
scaffold0028 (51-120)||(71845-71914)
[»] scaffold0778 (1 HSPs)
scaffold0778 (51-103)||(5285-5336)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 4e-82; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 181 - 380
Target Start/End: Original strand, 5559748 - 5559947
Alignment:
Q  181 caaatttacaatcttgattttgagttcctagagtctagcccaacaaatgtgtgaggttcaatggtgataacaacgtcagaaaaatattcgctctcgtgtg 280  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  5559748 caaatttacaatcttggttttgagttcctaaagtctagcccaacaaatgtgtgaggttcagtggtgataacaacgtcagaaaaagattcgctctcgtgtg 5559847  T
Q  281 attattcaccagagttcaatacccttatccatttttaattannnnnnnaataattaaaactacaggtggtaaaagaaaatgattgaatgagatttcattt 380  Q
    ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5559848 attattcacaagagttcaatacccttatccatttttaattatttttttaataattaaaactgcaggtggtaaaagaaaatgattgaatgagatttcattt 5559947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 179
Target Start/End: Original strand, 5559562 - 5559724
Alignment:
Q  17 attggagagggtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagt 116  Q
    ||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || | | | |    
T  5559562 attggagggagtatattgtttagaatataaaccaaaatacatcatttatgcaatgaatcaaaaaaatcaaatatgtcttataaataggatcggaggaaat 5559661  T
Q  117 aattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  5559662 aattaattaaatgcacaaattttaagagactatttctatttctgtgttgcttaacatgtgccc 5559724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 38983087 - 38982998
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| | ||||||    
T  38983087 gtatcttgtctagaatatagac-aaaatacatcatttatgcaatgaatcaaaaaagtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 32457278 - 32457226
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32457278 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 32457226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 30758808 - 30758726
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaa 110  Q
    ||||||||| |||| |||| |||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  30758808 gtatcttgtctaaagtatagaccaaa-tacaccatttatgcaatgaataaaaaaagtcaaatatttcttataaataggaccgaa 30758726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 12962775 - 12962840
Alignment:
Q  37 taaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  12962775 taaaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 12962840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 35728553 - 35728477
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaag-tcaaatatgtcttataaatag 103  Q
    |||||||||||| |||||| |||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  35728553 gtatcttgtttagaatatagaccaaa-tatatcatttatgcaatgaatcaaaaaagatcaaatatttcttataaatag 35728477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 10204986 - 10205061
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| ||||||||| || ||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  10204986 gtatcttgtctaaaatatagactaaa-tacatcatttatacaatgaatcaaaagagtcaaatatttcttataaatag 10205061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 28248998 - 28248942
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaacc 107  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28248998 aaatacattatttatgcaattaatcaaaaaagtcaaatatttcttataaatagaacc 28248942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 7943527 - 7943453
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || |||||| |||||| || |||||||||||||||||| ||||||||||||||| |||||||||||    
T  7943527 gtatcttgtctacaatatagaccaaa-tatatcatttatgcaatgaataaaaaaagtcaaatatctcttataaata 7943453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 3837497 - 3837428
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttata 98  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||| | |||||||    
T  3837497 tatcttgtttaaaatatagaccaaa-tacattatttatgcaatgaatcaaaaaaatcaaatgtttcttata 3837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 4410865 - 4410776
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||| | |||| ||||||||||||||||| ||||||||| || |||| | |||||||||||| | || ||||||||    
T  4410865 gtatcttgtttaaaatatagatcaaa-tacatcatttatgcaataaatcaaaaaggttaaatgtttcttataaataggatcggatggagta 4410776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 12873806 - 12873872
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||| ||| ||||||    
T  12873806 aaatacatcatttatgcaatgaatcaataaagtcaaatattttttataaatataacagaagggagta 12873872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 34447591 - 34447503
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||  ||||||||||||| | |||||||||||| |||| ||| ||||    
T  34447591 gtatcttgtctaaaatataaaccaaa-tacattatttatgcaatgaactaaaaaagtcaaat-tttcttataaataggaccggatgaagta 34447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 28494787 - 28494844
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||| ||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  28494787 aaatatatcatttatgcaatgaatcaaaaaaatcaaatgtttcttataaatagaaccg 28494844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 41153192 - 41153128
Alignment:
Q  34 gtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataa 99  Q
    ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||    
T  41153192 gtttataatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 29988975 - 29989027
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  29988975 aaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttctaaatag 29989027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 5281243 - 5281204
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatat 90  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5281243 aaatacatcatttatgcaatgaatcaaaaaagtcaaatat 5281204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 38554523 - 38554456
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    |||||||| ||||||| |||||||||||| |||||||| | |||||||||||| ||| ||||||||||    
T  38554523 aaatacattatttatgtaatgaatcaaaatagtcaaatgtttcttataaataggaccaaatggagtaa 38554456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 22333590 - 22333524
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||| ||||||||||||||||||||||||  ||| | |||||||||||| | |||||||||||    
T  22333590 aaatacattatttatgcaatgaatcaaaaaagtttaatgtttcttataaataggatcgaatggagta 22333524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 32487073 - 32487123
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaat 101  Q
    |||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  32487073 aaatacattatttatgcaatgaatcaaaaaagtcaaatacttcttataaat 32487123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 33274058 - 33273981
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    |||| |||| |||||||||| ||||| || ||||||||| |||||||||||||||||||||  | ||||||||||||||    
T  33274058 gtatgttgtctaaaatataagccaaa-tatatcatttatacaatgaatcaaaaaagtcaaagttttcttataaatagaa 33273981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 11030257 - 11030205
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||| ||||    
T  11030257 aaatacatcatttatgtaatgaatcaaaaaagtcaaatgtttcttatatatag 11030205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 28014356 - 28014408
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||| ||||| ||||||| | ||||||||||||    
T  28014356 aaatacatcatttatgcaatgaataaaaaaggtcaaatgtttcttataaatag 28014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 11182230 - 11182171
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaa 110  Q
    |||||||||||||||| ||||||||||||||||||||| |  |||||| |||| ||||||    
T  11182230 aaatacatcatttatggaatgaatcaaaaaagtcaaatgttgcttatatataggaccgaa 11182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 30761461 - 30761528
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    ||||||||  ||| |||||||||||||||||||||||| | |||||||||||| |||| | |||||||    
T  30761461 aaatacatattttgtgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtaa 30761528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 33824433 - 33824484
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||| ||||||||| |||||||||| ||||||||||||| |||||||||||    
T  33824433 aaatatatcatttatacaatgaatcagaaaagtcaaatatttcttataaata 33824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 39445078 - 39445145
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    ||||||| |||||||||||| ||| |||||||||||  || |||||||||||||| || |||||||||    
T  39445078 aaatacaccatttatgcaataaattaaaaaagtcaataatttcttataaatagaatcggatggagtaa 39445145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 2936376 - 2936428
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||| ||||| ||| |||||||||||||||||||||| | ||||||||||||    
T  2936376 aaatatatcatctatccaatgaatcaaaaaagtcaaatgtttcttataaatag 2936428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 22651145 - 22651093
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaa 170  Q
    ||||||| |||||| ||| ||||||||||||||||||||| | ||||||||||    
T  22651145 attaattgaatgcataaaatttaagagaatatttctatttttatgttgcttaa 22651093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 5109446 - 5109497
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||| |||||| |  ||||||||||||||||||||| |||||||||||    
T  5109446 aaatacataatttatactttgaatcaaaaaagtcaaatatttcttataaata 5109497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 9152467 - 9152378
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||| || ||||||||| |||||| ||||||| ||||  ||||| ||||||||||||||| | |||| ||||||| |||| | ||||||    
T  9152467 gtatctagtctaaaatatagaccaaa-tacatcaattatttaatgactcaaaaaagtcaaatgtttcttgtaaataggaccggagggagta 9152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 11794532 - 11794598
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||| ||||| |||||| || |||| | |||||||||||| |||| | ||||||    
T  11794532 aaatacatcatttatgccatgaaacaaaaatgtaaaatgtttcttataaataggaccggagggagta 11794598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 34504257 - 34504315
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatg 174  Q
    ||||||||| |||||||||| ||||||||||||||| || || ||  ||||||||||||    
T  34504257 taattaattgaatgcacaaaatttaagagaatatttttacttttgaattgcttaacatg 34504315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 41542822 - 41542760
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgcc 178  Q
    |||| ||||||||||||||| ||| |||||||||||||  || || ||| |||||||||||||    
T  41542822 taatcaattaaatgcacaaaattttagagaatatttcttcttttgagtttcttaacatgtgcc 41542760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 920474 - 920534
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||||||||||| |||||| || ||| ||||| ||||||| ||| |||||||||||||||||    
T  920474 gtatcttgtttagaatatagactaaa-tacattatttatgaaataaatcaaaaaagtcaaat 920534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 29169901 - 29169848
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaa-gtcaaatatgtcttataaatag 103  Q
    ||||||||||||||  |||||||| |||||| ||||||||| ||||||||||||    
T  29169901 aaatacatcatttagacaatgaattaaaaaaagtcaaatatttcttataaatag 29169848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 43135106 - 43135171
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagt 116  Q
    |||||||||| ||||  ||| |||||||||||| || | | |||||||||||||| ||||||||||    
T  43135106 aaatacatcaattatttaataaatcaaaaaagtgaattgtttcttataaatagaatcgaatggagt 43135171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 2080589 - 2080529
Alignment:
Q  119 ttaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||| |||||||||| ||||||||||||||| |  || || ||| ||||||||||||||    
T  2080589 ttaattgaatgcacaaaatttaagagaatatttttgcttttgggtttcttaacatgtgccc 2080529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 12972773 - 12972709
Alignment:
Q  115 gtaattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||| |||| |||||||||| ||| |||||||| ||||| || ||  |||||||||||||||||    
T  12972773 gtaataaattgaatgcacaaaatttcagagaataattctacttttggattgcttaacatgtgccc 12972709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 36881610 - 36881662
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||| ||| ||||||| ||||||||||||||||||||| | |||| |||||||    
T  36881610 aaattcattatttatgtaatgaatcaaaaaagtcaaatgtttcttgtaaatag 36881662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 30627883 - 30627965
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaa 110  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  30627883 gtatcttgtctaaaatatagaccaaa-tacatcatttatgcaatgaatcagaaaagtcaaatgtttcttataaatagaaccgaa 30627965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 3064943 - 3065032
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||| |||| | ||||||    
T  3064943 gtatcttgtataaaatatagaccaaa-tacaccatttatgcaatgaatcaaaaaagtaaaatatttcttataaataggaccggagggagta 3065032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 9077646 - 9077720
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || |||||| |||||| | ||||||||||||||||||||||||||||||||||| |||||||||||    
T  9077646 gtatcttgtctagaatatagaccaaa-tgcatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaata 9077720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 28863380 - 28863469
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| || ||||||||||||| ||||||||||||||||| ||||||| || | |||| | ||||||||||||||||| ||||||||    
T  28863380 gtatcttgtctagaatataaaccaaa-tacatcatttatgcaataaatcaaagaatttaaatgtttcttataaatagaaccggatggagta 28863469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 12450434 - 12450484
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaat 101  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  12450434 aaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaat 12450484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 17265786 - 17265734
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  17265786 aaatacgtcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 17265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 30895267 - 30895318
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  30895267 aaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaata 30895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 33119969 - 33119903
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||| ||||||| |||||||||||| ||||||||| | |||||||||||| |||||| ||||||    
T  33119969 aaatacaacatttatacaatgaatcaaagaagtcaaatgtttcttataaataggaccgaagggagta 33119903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 2972224 - 2972296
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaa 100  Q
    ||||||| | ||||||||| || ||||||||||||||||||||||||||||||| ||| ||| | |||||||||    
T  2972224 gtatcttatctaaaatatagac-aaaatacatcatttatgcaatgaatcaaaaacgtctaatgtttcttataaa 2972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 10283359 - 10283299
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaat 111  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||||||| || |||||    
T  10283359 aaatacatcatttataccatgaatcaaaaaagtcaaatattttttataaatataatcgaat 10283299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 28630813 - 28630888
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| || |||||| |||||| ||||| |||||||||||||||| |||||||||| | | ||||||||||||    
T  28630813 gtatcttgtctataatatagaccaaa-tacataatttatgcaatgaatctaaaaagtcaattgtttcttataaatag 28630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 2937166 - 2937093
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||||||| ||||||| |||| | ||||||||||||    
T  2937166 tatcttgtctaaaatgtaaaccaaa-taca-catttatgcaatgaatctaaaaagttaaatgtttcttataaatag 2937093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 8052939 - 8052990
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||| |||| | |||||||| ||||||||||||||| |||||||||||    
T  8052939 aaatacattatttgtacaatgaattaaaaaagtcaaatatttcttataaata 8052990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 12999820 - 12999769
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| ||||||||||||||||||||||| |||| | |||| ||||||    
T  12999820 aaatacatcttttatgcaatgaatcaaaaaagttaaatgtttcttgtaaata 12999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 21162463 - 21162412
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaataga 104  Q
    |||||| ||||||||||||||| |||||||| |||| | |||||||||||||    
T  21162463 atacattatttatgcaatgaattaaaaaagttaaatgtttcttataaataga 21162412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 5051606 - 5051568
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttcta 154  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  5051606 taattaattaagtgcacaaaatttaagagaatatttcta 5051568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 25538047 - 25538097
Alignment:
Q  67 caatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||| |||||| |||||||||||  |||| ||||||||    
T  25538047 caatgaatcaaaaaagttaaatatttcttataaataagaccggatggagta 25538097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 5456616 - 5456556
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgcc 178  Q
    ||||||| ||| |||||| || |||||||||||||||||| |  |||||||||||| ||||    
T  5456616 attaattgaatacacaaaattcaagagaatatttctattttttggttgcttaacatttgcc 5456556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 12217138 - 12217083
Alignment:
Q  119 ttaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgt 175  Q
    |||||||||||| |||| ||||| ||||||||||||||| |  ||||||||||||||    
T  12217138 ttaattaaatgctcaaa-tttaatagaatatttctatttttaggttgcttaacatgt 12217083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 27909058 - 27909110
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||| |||| |||||||| ||||||||||||| | |||| |||||||    
T  27909058 aaatacatcaattattcaatgaattaaaaaagtcaaatgtttcttgtaaatag 27909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 9197164 - 9197090
Alignment:
Q  32 ttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaacc 107  Q
    ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9197164 ttgtttagaatatagac-aaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatagaacc 9197090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 36985216 - 36985289
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaat 101  Q
    |||||||||||| |||||| || ||| ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  36985216 gtatcttgtttagaatatagactaaa-tacattatttatgcaatgaatcaaaaaagtcaaaaatttcttataaat 36985289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 37010655 - 37010728
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaat 101  Q
    |||||||||||| |||||| || ||| ||||| |||||||||||||||||||||||||||| || ||||||||||    
T  37010655 gtatcttgtttagaatatagactaaa-tacattatttatgcaatgaatcaaaaaagtcaaaaatttcttataaat 37010728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 51517040 - 51517106
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||| |||||||||||||| | |||||||||||| |||| | ||||||    
T  51517040 aaatacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagggagta 51517106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 53441972 - 53441906
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||| | ||||||    
T  53441972 aaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagta 53441906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 13622575 - 13622495
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| ||||||||| |||||| || |||||||||||||||||  ||||||||||||| | |||||||||||| ||||    
T  13622575 gtatcttgtgtaaaatatagaccaaa-tatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaataggaccg 13622495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 43449019 - 43449107
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||| ||  |||||||||||| |||||||||||| ||||||| ||||||| |||||||| |||||||||||| | |||| ||||||    
T  43449019 tatcttgtctatgatataaaccaaa-tacatcatttatacaatgaaccaaaaaaatcaaatatttcttataaataggatcgaagggagta 43449107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 21662969 - 21663037
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaat 119  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||  |||| | ||||||||    
T  21662969 aaatacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggagggagtaat 21663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 44518096 - 44518171
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| ||||||||| |||||| |||||||||||  |||||||||||||||||||||  | ||||||||||||    
T  44518096 gtatcttgtctaaaatatagaccaaa-tacatcatttagacaatgaatcaaaaaagtcaaagttttcttataaatag 44518171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 45010838 - 45010763
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||| ||||| |||||| |||| || ||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  45010838 gtatctagtttagaatatagaccacaa-acatcatttatacaataaatcaaaaaagtcaaatatttcttataaatag 45010763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 54537526 - 54537593
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    |||||||  |||||||||||||||||||||||||||  || |||||||||||| |||||| |||||||    
T  54537526 aaatacacaatttatgcaatgaatcaaaaaagtcaataatttcttataaataggaccgaagggagtaa 54537593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 19649644 - 19649583
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatg 112  Q
    |||||||||| |||| |||||||||||||||||||||| | |||| |||||| |||||||||    
T  19649644 aaatacatcaattattcaatgaatcaaaaaagtcaaatgtttcttgtaaataaaaccgaatg 19649583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 43343532 - 43343581
Alignment:
Q  54 tacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  43343532 tacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaatag 43343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 52865034 - 52865086
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||| |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  52865034 aaatatatcatttatgcaatgaatcaaaaaagtcaattattttttataaatag 52865086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 23223046 - 23222972
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| ||||||||| |||||| ||||||||||||  ||| ||| ||||||||||||| | |||||||||||    
T  23223046 gtatcttgtctaaaatatagaccaaa-tacatcatttatataataaattaaaaaagtcaaatgtttcttataaata 23222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 50354325 - 50354376
Alignment:
Q  57 atcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||| ||||    
T  50354325 atcatttatgcaatgaatcaaaaaaatcaaatattttttataaataggaccg 50354376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 8266318 - 8266380
Alignment:
Q  55 acatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||| |||||| |||||||||||||||||||||| | |||||||||||| |||| | ||||||    
T  8266318 acattatttatacaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 8266380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 12064974 - 12064908
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||||||| |||||||||||||||||||| |||| | |||||||| ||| |||| | ||||||    
T  12064974 aaatacatcattaatgcaatgaatcaaaaaagtaaaatgtttcttataagtaggaccggagggagta 12064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 35099142 - 35099069
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||| || |||||| |||||| |||||||||||| |||| ||| |||||||| |||||| |||||||||||    
T  35099142 tatcttgtctagaatatagaccaaa-tacatcatttatacaataaattaaaaaagttaaatatttcttataaata 35099069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 9236170 - 9236209
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatat 90  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  9236170 aaatatatcatttatgtaatgaatcaaaaaagtcaaatat 9236209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 20028535 - 20028485
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||| ||||||| ||||||||||||||| | |||||||||    
T  20028535 aaatacatcatttatgaaatgaat-aaaaaagtcaaatattttttataaata 20028485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 38672800 - 38672745
Alignment:
Q  120 taattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgt 175  Q
    ||||| ||||||||||  |||||||||||||||||||| || |||| |||||||||    
T  38672800 taattgaatgcacaaatcttaagagaatatttctatttttgggttgtttaacatgt 38672745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 47495804 - 47495741
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||||||||||||||||  ||||   ||||||||||||| |  ||||||||||||||||||    
T  47495804 taattaattaaatgcacaaatattaaagaaatatttctattttttagttgcttaacatgtgccc 47495741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 51723461 - 51723527
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||| ||||||||| ||||||||||||||||| |||| | || ||| |||||||||| | ||||||    
T  51723461 aaatatatcatttatacaatgaatcaaaaaagttaaatttttcctattaatagaaccggagggagta 51723527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 28677405 - 28677316
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| | ||||||    
T  28677405 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 28677316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 6838435 - 6838509
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  6838435 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaata 6838509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 36245464 - 36245375
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||| | ||||||    
T  36245464 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagggagta 36245375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 41850679 - 41850745
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||| ||||||||    
T  41850679 aaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggatggagta 41850745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 39153352 - 39153300
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  39153352 aaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 39153300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 11668080 - 11668014
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||| | ||||||    
T  11668080 aaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 11668014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 13807321 - 13807387
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  13807321 aaatatatcatttatgtaatgaatcaaaaaagtcaaatgtttcttataaatagaaccggagggagta 13807387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 2680923 - 2680858
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagt 116  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||||||||| | |||| |||||    
T  2680923 aaatacatcatttatataatgaatcaaaaaagtcaaatatttcttataaataggatcgaagggagt 2680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 2400017 - 2399966
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  2400017 aaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaata 2399966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 8566169 - 8566099
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttata 98  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||||||||||||| |||| | |||||||    
T  8566169 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaagttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 10462437 - 10462514
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaac 106  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||| ||| ||| | |||||||||||||||    
T  10462437 gtatcttgtctaaaatatataccaaa-tacatcatttatgcaatgaataaaaaatgtc-aatgtttcttataaatagaac 10462514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 29365686 - 29365627
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaa 110  Q
    ||||||||||||||||||||| || ||||||||||||| | |||||||||||| ||||||    
T  29365686 aaatacatcatttatgcaatgtattaaaaaagtcaaatgtttcttataaataggaccgaa 29365627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 2523833 - 2523784
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  2523833 atacatcgtttatgcaatgaatcaaaaaagtcaaatgtttcttataaata 2523784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 40142861 - 40142801
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    ||||||||||||  ||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  40142861 gtatcttgtttaggatatagaccaaa-tacattatttatgcaatgaatcaaaaaagtcaaat 40142801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 45533290 - 45533364
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || |||||| |||||| ||||| |||||| |||||||| ||||||||||||| | |||||||||||    
T  45533290 gtatcttgtctagaatatagaccaaa-tacattatttatacaatgaattaaaaaagtcaaatgtttcttataaata 45533364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 7456482 - 7456436
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataa 99  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  7456482 atacatcatttatacaatgaatctaaaaagtcaaatatttcttataa 7456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 24163354 - 24163404
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||| |||||||| |||| | ||||||||||||    
T  24163354 atacatcatttatgcaatgaattaaaaaagtgaaatgtttcttataaatag 24163404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 28298946 - 28298991
Alignment:
Q  60 atttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    ||||||||||||||||||||||||||||| | | ||||||||||||    
T  28298946 atttatgcaatgaatcaaaaaagtcaaatgttttttataaatagaa 28298991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 37708524 - 37708463
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||| |||||||||| |||||| |||| |||||||||||| ||| |||||||| |||||    
T  37708524 attaattgaatgcacaaaatttaagggaatgtttctatttctgagttacttaacatctgccc 37708463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 42121401 - 42121462
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||| |||| ||||| ||||||||||| |||||| || || ||||||||||||||||||    
T  42121401 attaattgaatgtacaaaatttaagagaatgtttctacttttgggttgcttaacatgtgccc 42121462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 45441501 - 45441444
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||||| ||| |||| ||||||||||||||||||| || ||||||||| ||||    
T  45441501 aaatacatcatctatacaataaatcaaaaaagtcaaatatttcatataaataggaccg 45441444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 47987211 - 47987263
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaa 81  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||    
T  47987211 tatcttgtttagagtataaaccaaa-tacatcatttatgcaatgaattaaaaaa 47987263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 48082881 - 48082938
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||| |||||||| ||||||| ||||||||||||||| | |||||||||| ||||    
T  48082881 aaatacaccatttatgtaatgaataaaaaaagtcaaatatttattataaataggaccg 48082938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 48723310 - 48723250
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgcc 178  Q
    ||||||| |||| ||||| ||||||| ||| ||||||||| || |||||||||||||||||    
T  48723310 attaattgaatgtacaaaatttaagataatgtttctatttttgggttgcttaacatgtgcc 48723250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 9979865 - 9979815
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||| ||| |||||||| |||||||||| |||||||||||    
T  9979865 aaatacatcatttatg-aataaatcaaaatagtcaaatatttcttataaata 9979815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 33645250 - 33645187
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||||||| |||||||| ||||| ||| | ||||||||| || |||| |||||||||||||    
T  33645250 taattaattaagtgcacaaaatttaaaagattgtttctatttttgggttgtttaacatgtgccc 33645187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 48838382 - 48838444
Alignment:
Q  37 taaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaa 100  Q
    ||||||||| |||||| ||||||||||||| ||||||| |||||||| |||| | |||||||||    
T  48838382 taaaatatagaccaaa-tacatcatttatgtaatgaattaaaaaagttaaatgtttcttataaa 48838444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 26715146 - 26715204
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtg 176  Q
    ||||||| |||||||||| || |||||||||||| ||||| ||  ||||||||||||||    
T  26715146 attaattgaatgcacaaaattcaagagaatatttttatttttggattgcttaacatgtg 26715204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 27772972 - 27772914
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtg 176  Q
    ||||||| |||||||||| ||| ||| ||||||| ||||| || |||||||||||||||    
T  27772972 attaattgaatgcacaaaatttgagataatatttttatttttgggttgcttaacatgtg 27772914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 30869274 - 30869197
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    ||||||||| || |||||| |||||| ||||| |||||| |||| ||||||||| ||||||| | || |||||||||||    
T  30869274 gtatcttgtctagaatatagaccaaa-tacattatttatacaataaatcaaaaacgtcaaatgtttcatataaatagaa 30869197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 9658406 - 9658467
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||||||||| ||||| ||||||| || ||||||| || || |||||||||||| |||||    
T  9658406 attaattaaatgaacaaaatttaagaaaaaatttctacttttgagttgcttaacatatgccc 9658467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 32802547 - 32802608
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||||||||| | ||| ||||||||||||||| || || || |||| |||||||||||||    
T  32802547 attaattaaatgtataaaatttaagagaatatttttaattttgggttggttaacatgtgccc 32802608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 8793802 - 8793859
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  8793802 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataggaccg 8793859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 16448877 - 16448797
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||| | || ||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||| ||||    
T  16448877 gtatcttatatagaatataaaccaaa-tatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccg 16448797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 35149756 - 35149676
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| || |||||| |||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  35149756 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaattaatcaaaaaagtcaaatgtttcttataaataggaccg 35149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 5031547 - 5031599
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  5031547 aaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 5031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 42123054 - 42122979
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  42123054 gtatcttgtctagaatatataccaaa-tacatcatttatgcaatgaatcaaaaaagtcaaacgtttcttataaatag 42122979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 3236390 - 3236464
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||| ||||||||| || |||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  3236390 gtatctagtttaaaatttagaccaaa-tacatcatttatacaatgaattaaaaaagtcaaatatttcttataaata 3236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 40483348 - 40483291
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    |||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||    
T  40483348 aaatacatcatttatgcaatgaattaaaaaagttaaatatttcttataaataggaccg 40483291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 7693098 - 7693046
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  7693098 aaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaatag 7693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 8803288 - 8803363
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| || |||||| |||||| ||||||||||||| |||||||||||||||| |||||| | ||||||||||    
T  8803288 gtatcttgtctagaatatagaccaaa-tacatcatttatgtaatgaatcaaaaaagttaaatattttttataaatag 8803363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 24619023 - 24618971
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  24619023 aaatacatcatttatgcaatgaatcaaaaaagtcaaaggtttcttataaatag 24618971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 15726846 - 15726773
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||| || |||||||||||||||||| || ||| |||||| |||||||| ||||||||||||    
T  15726846 tatcttgtttaaaatatatac-aaaatacatcatttatgcgataaattaaaaaa-tcaaatatttcttataaatag 15726773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 10839846 - 10839911
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||| ||||||| |||| | |||||||||||| |||| ||||||||    
T  10839846 aaatacatcatttatgcaatgaatc-aaaaagttaaatgtttcttataaataggaccggatggagta 10839911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8453660 - 8453595
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagt 116  Q
    |||||||| ||||||| |||||||||||||| |||||| | || |||||||||||||| |||||||    
T  8453660 aaatacattatttatgtaatgaatcaaaaaattcaaatgtttcctataaatagaaccggatggagt 8453595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 32597565 - 32597512
Alignment:
Q  49 caaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||| |||| ||||||||||||||||||||||| | |||||||||||    
T  32597565 caaaatacatcgtttacgcaatgaatcaaaaaagtcaaatgtttcttataaata 32597512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 43332643 - 43332696
Alignment:
Q  50 aaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||| ||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  43332643 aaaaaacatcatttatgcaatgaatcaaaaaaatcaaatattttttataaatag 43332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 36191833 - 36191773
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatat 90  Q
    ||||||||| |||||||||   | |||||||||||||||||||||||  |||||||||||||||    
T  36191833 gtatcttgtataaaatata---ccaaatacatcatttatgcaatgaaagaaaaaagtcaaatat 36191773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 40651283 - 40651355
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || ||||||||| ||| ||||| |||||| |  ||||||||||||||||||||| |||||||||||    
T  40651283 gtatcttgtctataatataaactaaa-tacattatttatac--tgaatcaaaaaagtcaaatatttcttataaata 40651355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 10184616 - 10184577
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatat 90  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  10184616 aaatacatcatttatacaatgaataaaaaaagtcaaatat 10184577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 16008588 - 16008534
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    |||||||| |||||||||||  || ||||||||||||| | ||||||||||||||    
T  16008588 aaatacattatttatgcaatagattaaaaaagtcaaatgtttcttataaatagaa 16008534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 34711141 - 34711220
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    |||| |||| |||||||||||| ||| ||||||||| ||||||| ||||||||||||  ||| | | |||||||||||||||    
T  34711141 gtattttgtctaaaatataaactaaa-tacatcattaatgcaataaatcaaaaaagt-taattttttttataaatagaaccg 34711220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 1223183 - 1223242
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaa 87  Q
    |||||||||  |||||||| |||||| ||||| ||||||||||||||| |||| |||||||    
T  1223183 gtatcttgtcaaaaatatagaccaaa-tacataatttatgcaatgaattaaaatagtcaaa 1223242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 24821956 - 24821900
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaacc 107  Q
    |||||||| ||||||| ||| ||| |||||||| |||| | ||||||||||||||||    
T  24821956 aaatacattatttatgtaataaattaaaaaagttaaatgtttcttataaatagaacc 24821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 15342997 - 15343072
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  15342997 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaatcaaaaaaatcaaatatttcttataaatag 15343072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 38738019 - 38737944
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  38738019 gtatcttgtctagaatataaaccaaa-tacatcctttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 38737944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 38040341 - 38040275
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||||| ||||||    
T  38040341 aaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccgaagggagta 38040275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 39748686 - 39748633
Alignment:
Q  49 caaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  39748686 caaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaata 39748633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 11386238 - 11386303
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||| ||||||    
T  11386238 aaatacatcatttatgcaatgaatc-aaaaagtcaaatgtttcttataaataggaccgaaaggagta 11386303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 26924296 - 26924362
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||| | ||||||    
T  26924296 aaatacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 26924362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 27819400 - 27819310
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||| |||| ||||||||||| ||||  | |||||||||| ||||||||||||||||||||||| | |||||||||  |||| ||||||||    
T  27819400 gtattttgtctaaaatataaatcaaataatatcatttatgaaatgaatcaaaaaagtcaaatattttttataaataagaccggatggagta 27819310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 26760238 - 26760186
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  26760238 aaatacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaatag 26760186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 34332559 - 34332611
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  34332559 aaatacatcatttatccaatgaatcaaaaaagtcaaatgtttcttataaatag 34332611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 8971320 - 8971363
Alignment:
Q  60 atttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  8971320 atttatgcaatgaatcaaaaaagtcaaatatttcttataaatag 8971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 6661574 - 6661634
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    ||||||||| || |||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  6661574 gtatcttgtatagaatatagaccaaa-tacatcatttatgcaattaatcaaaaaagtcaaat 6661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 44939131 - 44939074
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||||||||| |||||||| ||||||||||||| | |||||||||||| ||||    
T  44939131 aaatacatcatttatacaatgaataaaaaaagtcaaatgtttcttataaataggaccg 44939074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 47912882 - 47912825
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  47912882 aaatacattatttatacaataaatcaaaaaagtcaaatatttcttataaataggaccg 47912825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 49944893 - 49944973
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| || |||||| |||||| |||||||||||| ||||||||||||||| |||||| | |||| ||||||| ||||    
T  49944893 gtatcttgtctagaatatagaccaaa-tacatcatttatacaatgaatcaaaaaaatcaaatgtttcttgtaaataggaccg 49944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 519898 - 519830
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaat 119  Q
    ||||||||||||||| |||| ||||||||||||||||| | | |||||||||| |||| | ||||||||    
T  519898 aaatacatcatttatacaataaatcaaaaaagtcaaatgtttattataaataggaccggagggagtaat 519830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 37178970 - 37179041
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataa 99  Q
    ||||||||| ||||||||| || ||| |||||||||||| |||| ||||||||||||||||| | ||||||||    
T  37178970 gtatcttgtctaaaatatagactaaa-tacatcatttatacaataaatcaaaaaagtcaaatgtttcttataa 37179041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 52427412 - 52427376
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaa 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  52427412 aaatacatcatttatgcaatgaatcaaaaaagtcaaa 52427376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 26070907 - 26070958
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||| |||||||||||||||||||||||| |||| | |||||||||||    
T  26070907 aaatacattatttatgcaatgaatcaaaaaagtaaaatgtttcttataaata 26070958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 6793677 - 6793743
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||||||||||||||||||||| |||||| |||| | |||| ||||||| |||| || |||||    
T  6793677 aaatacatcatttatgcaatgaatcataaaagttaaatgtttcttttaaataggaccggatagagta 6793743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 2351195 - 2351146
Alignment:
Q  54 tacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  2351195 tacaacatttatgcaatgaatcaaaaaagttaaatgtttcttataaatag 2351146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 5891801 - 5891725
Alignment:
Q  40 aatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||| ||||| || |||||||| ||| |||||||| |||||| |||||||||||| |||| | ||||||    
T  5891801 aatataaaccaaa-tacattatatatgcaattaattaaaaaagttaaatatttcttataaataggaccggagggagta 5891725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 18744639 - 18744704
Alignment:
Q  52 aatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||| |||||||| |||| | |||| ||||||| |||| | ||||||    
T  18744639 aatacatcatttatgcaatgaataaaaaaagttaaatgtttcttttaaataggaccggagggagta 18744704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 24305753 - 24305673
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| || ||||||||||  | |||||||||||||| |||||| |||||| |||||||| | ||||||| |||||||    
T  24305753 gtatcttgtatagaatataaacctta-tacatcatttatgcgatgaataaaaaaaatcaaatattttttataaacagaaccg 24305673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 38590131 - 38590074
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    |||||||| ||||||| |||||||||||||||||||||   ||||||| |||||||||    
T  38590131 aaatacattatttatgaaatgaatcaaaaaagtcaaatgcttcttatatatagaaccg 38590074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 7375238 - 7375195
Alignment:
Q  60 atttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||    
T  7375238 atttatgcaatgattcaaaaaagtcaaatattttttataaatag 7375195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 15286074 - 15286023
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||  ||||||| ||||||||||||| | |||||||||||    
T  15286074 aaatacatcatttatataatgaattaaaaaagtcaaatgtttcttataaata 15286023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 42728196 - 42728149
Alignment:
Q  131 acaaactttaagagaatatttctatttctgtgttgcttaacatgtgcc 178  Q
    ||||| |||||||| |||||||||||| || |||||||||||||||||    
T  42728196 acaaaatttaagaggatatttctatttttgggttgcttaacatgtgcc 42728149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 13771203 - 13771149
Alignment:
Q  119 ttaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacat 173  Q
    ||||||||||||| |||| |||||| ||||||||||||| |  ||||||||||||    
T  13771203 ttaattaaatgcataaacattaagaaaatatttctatttttaggttgcttaacat 13771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 29256664 - 29256634
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaa 81  Q
    |||||||||||||||||||||||||||||||    
T  29256664 aaatacatcatttatgcaatgaatcaaaaaa 29256634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 43949156 - 43949220
Alignment:
Q  115 gtaattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||| |||| |||||||||| ||| |||||||||||||  || || ||| ||||||||||||||    
T  43949156 gtaatgaattgaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgccc 43949220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 49944896 - 49944832
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||| |||| ||||||||| ||||||| |||| | |||||||||||| |||| ||| ||||    
T  49944896 atacatcaattattcaatgaatctaaaaagttaaatttttcttataaataggaccggatgtagta 49944832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 50155363 - 50155311
Alignment:
Q  51 aaatacatcatttatgcaatgaa-tcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||||||||||||||| | |||||| |||||||| | |||||||||    
T  50155363 aaatacatcatttatgcaatgaattaaaaaaaatcaaatatttattataaata 50155311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 5002228 - 5002148
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| ||||||||| | |||| ||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||    
T  5002228 gtatcttgtctaaaatatagatcaaa-tacatcatttatgcaattaatcaaaaaagtcaaatgtttcttataaataggaccg 5002148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 34297236 - 34297173
Alignment:
Q  54 tacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||  |||| ||||||||    
T  34297236 tacatcatttatgcaatgaattaaaaaagtcaaatatttcttataaataagaccggatggagta 34297173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 13789797 - 13789731
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||| | ||||||    
T  13789797 aaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagta 13789731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 33478190 - 33478256
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||| | ||||||    
T  33478190 aaatacatcatttatgcaatgaatcaaaaatgtcaaatgtttcttataaataggaccggagggagta 33478256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 38394511 - 38394577
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||| | |||| ||||||    
T  38394511 aaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggatcgaagggagta 38394577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 21488348 - 21488296
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  21488348 aaatacattatttatgcaatgaattaaaaaagtcaaatatttcttataaatag 21488296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 22101968 - 22102042
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| ||||||||| | |||| ||||| |||||| |||| ||||||||||||||||||| |||||||||||    
T  22101968 gtatcttgtctaaaatatagatcaaa-tacattatttatacaataaatcaaaaaagtcaaatatttcttataaata 22102042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 36286121 - 36286070
Alignment:
Q  54 tacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  36286121 tacatcatttatgcaatgaatcaaaaaaatcaagtatttcttataaatagaa 36286070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 18473558 - 18473624
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||| |||||||||| |||||||||||||||||||||| | |||||||||||| ||| || ||||||    
T  18473558 aaatgcatcatttatacaatgaatcaaaaaagtcaaatgtttcttataaataggaccaaagggagta 18473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 18391586 - 18391526
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||||||||||| |||||| | |||| ||||| |||||||||||||||||||||||||||||    
T  18391586 gtatcttgtttataatatagatcaaa-tacattatttatgcaatgaatcaaaaaagtcaaat 18391526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 919707 - 919639
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaat 119  Q
    |||||||||||||||  ||||||||||||||||||||||| || |||| |||  |||| ||||||||||    
T  919707 aaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctatatatatgaccggatggagtaat 919639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 13665011 - 13664960
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||||||| ||| ||||||||||||| | |||||||||||    
T  13665011 aaatacatcatttatgcaattaattaaaaaagtcaaatgtttcttataaata 13664960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 29429689 - 29429752
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||||||||||||||||| ||||||| |  ||||||| || || ||||||||||||||||||    
T  29429689 taattaattaaatgcacaaaatttaagaaacaatttctacttttgggttgcttaacatgtgccc 29429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 10228152 - 10228201
Alignment:
Q  53 atacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  10228152 atacatcatttatacaatgaatcaaaaaagtcaaatgtttctaataaata 10228201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 36434766 - 36434706
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    ||||||||| ||||||||||||| ||||| |||||||||| ||||||| |||||| ||||||    
T  36434766 gtatcttgtctaaaatataaacc-aaatatatcatttatgtaatgaataaaaaaaatcaaat 36434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 16619101 - 16619152
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||| |||||||||||||| ||||||||| ||||| ||| |||||||||||    
T  16619101 aaatatatcatttatgcaataaatcaaaaacgtcaactatttcttataaata 16619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 29299417 - 29299507
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaat-caaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||| |||| ||||||||| ||| || |||||||||||| |||||||| |||||||||||||| | |||||||| ||| |||| | ||||||    
T  29299417 gtattttgtctaaaatatagaccgaa-tacatcatttatacaatgaattcaaaaaagtcaaatgtttcttataactaggaccggagggagta 29299507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 14221910 - 14221864
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttat 97  Q
    ||||| |||||||||||||| ||||||||||||||||| | ||||||    
T  14221910 aaatatatcatttatgcaattaatcaaaaaagtcaaatgtttcttat 14221864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 11932030 - 11932110
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| ||||||||| |||||| ||||||||||||  ||| |||||||||| | |||| | |||| ||||||| ||||    
T  11932030 gtatcttgtctaaaatatagaccaaa-tacatcatttatataataaatcaaaaaaattaaatgtttcttttaaataggaccg 11932110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 12289085 - 12289146
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||| ||| |||||| || ||||||||||||||| || ||  |||||||||||||||||    
T  12289085 attaattgaatacacaaaattcaagagaatatttctacttttggattgcttaacatgtgccc 12289146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 8234075 - 8234127
Alignment:
Q  123 ttaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgt 175  Q
    ||||||||||||| |||||||||||||||||  || || ||| ||||||||||    
T  8234075 ttaaatgcacaaaatttaagagaatatttcttcttttgagtttcttaacatgt 8234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 21554174 - 21554101
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag-aaccgaatggagtaattaat 123  Q
    ||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||||| | ||||||||||||    
T  21554174 aaatacatcatttatgcaatgaatcgaaaaagtcaaatattttttataaatagaaaccggaaggagtaattaat 21554101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 48195950 - 48196030
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||| |||||||||||||| | |||||||||||| ||||    
T  48195950 gtatcttgtctagaatatagaccaaa-tacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccg 48196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 25477610 - 25477558
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  25477610 aaatacatcatttatgcaatgaatcaaaaaagtcaaatattttttataaatag 25477558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 36132700 - 36132648
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  36132700 aaatacatcatttatacaatgaatcaaaaaagtcaaatatttcttataaatag 36132648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 48361135 - 48361187
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  48361135 aaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaatag 48361187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 32714334 - 32714267
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||||| ||||| | |||||||    
T  32714334 aaatacatcatttatgtaatgaatcaaaaaagtcaaatgtttcttataaataaaaccggaaggagtaa 32714267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 35429861 - 35429783
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaac 106  Q
    ||||||||| || |||||| |||||| |||||| ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  35429861 gtatcttgtctagaatatagaccaaa-tacatcttttatgcaacgaataaaaaaagtcaaatatttcttataaatagaac 35429783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 45828490 - 45828412
Alignment:
Q  40 aatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaat 119  Q
    ||||||||||||| ||||||||||||| || ||||||||||| |||||||| | |||||||||||| |||| ||||||||    
T  45828490 aatataaaccaaa-tacatcatttatgtaaagaatcaaaaaaatcaaatattttttataaatagaatcgaagggagtaat 45828412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 44111833 - 44111744
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||| |||| |||||| |||||| ||||||||||||| ||| ||||||||||||||||| | |||||||||||| |||| | ||||||    
T  44111833 gtatcttctttagaatatagaccaaa-tacatcatttatgtaattaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 44111744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 42670824 - 42670899
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||| ||||| |||||| |||||| || ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  42670824 gtatctcgtttagaatatagaccaaa-tatatcatttatgcaatgaatctaaaaagtcaaatgtttcttataaatag 42670899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 43117932 - 43117850
Alignment:
Q  37 taaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaa--gtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||  || |||||| || ||||||||| ||||||||||||||    
T  43117932 taaaatatagaccaaa-tacatcatttatgcaataaatcaaaaaaaagttaaatatttcatataaataggaccgaatggagtaa 43117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 4386219 - 4386270
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  4386219 aaatacatcatttatgtaatgaatcaaaaaagtcaaatttttcttataaata 4386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 30191979 - 30192030
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  30191979 aaatacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaata 30192030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 3162979 - 3163029
Alignment:
Q  52 aatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  3162979 aatacatcatttatgcaatgaatcaaaaaagtcaaatgttttttataaata 3163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 17284823 - 17284734
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    ||||||||| || |||||| |||| | |||||||||||||||||||||||||||| ||||||||   |||||||||| |||| | ||||||    
T  17284823 gtatcttgtctagaatatagaccaca-tacatcatttatgcaatgaatcaaaaaaatcaaatattcattataaataggaccggagggagta 17284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 41328718 - 41328759
Alignment:
Q  64 atgcaatgaatcaaaaaagtcaaatatgtcttataaatagaa 105  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  41328718 atgcaatgaatcaaaaaagtcaaatatttcttataaatagaa 41328759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 696438 - 696379
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaa 87  Q
    |||||||||||| |||||| || ||| | ||||||||||||||||||||||||||||||||    
T  696438 gtatcttgtttagaatatagactaaa-tccatcatttatgcaatgaatcaaaaaagtcaaa 696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 764736 - 764677
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaa 87  Q
    |||||||||||| |||||| || ||| | ||||||||||||||||||||||||||||||||    
T  764736 gtatcttgtttagaatatagactaaa-tccatcatttatgcaatgaatcaaaaaagtcaaa 764677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 19150806 - 19150858
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||||||||||||||||||||||| ||||||| |||| | ||||||||||||    
T  19150806 aaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaatag 19150858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 50121520 - 50121572
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    ||||| |||||||||||||||||| ||||||||||||| | ||||||||||||    
T  50121520 aaatatatcatttatgcaatgaattaaaaaagtcaaatgtttcttataaatag 50121572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 9044448 - 9044401
Alignment:
Q  55 acatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  9044448 acatcatttatacaatgaatcaaaaaagtcaaatatttcttatgaata 9044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 44061476 - 44061402
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||||||| || |||||| |||||| ||||| |||||||||||||||||||||| |||||  | |||||||||||    
T  44061476 gtatcttgtctagaatatagaccaaa-tacattatttatgcaatgaatcaaaaaactcaaacgtttcttataaata 44061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 8347705 - 8347778
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaat 101  Q
    |||| |||| ||||||||| ||| || |||||||||||| |||||||| ||||||||||||| | ||||||||||    
T  8347705 gtattttgtataaaatatagaccgaa-tacatcatttatacaatgaataaaaaaagtcaaatgtttcttataaat 8347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 16412317 - 16412383
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||| ||||||||||||  ||||| ||||||||||| ||||||| ||||||||| | ||||||    
T  16412317 aaatacattatttatgcaatgtgtcaaagaagtcaaatatttcttatatatagaaccggagggagta 16412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 31977825 - 31977753
Alignment:
Q  34 gtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaacc 107  Q
    ||||| |||||| |||||| || ||||||||||| | |||| |||||| |||||||| ||||||||||||||||    
T  31977825 gtttagaatatagaccaaa-tatatcatttatgctaggaataaaaaaaatcaaatatttcttataaatagaacc 31977753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 42169108 - 42169071
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||||||||||||||| |||||||||||||||||||||    
T  42169108 aaatacatcatttatgtaatgaatcaaaaaagtcaaat 42169071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 47943810 - 47943847
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||||||||||||||||||||||||||||| |||||||    
T  47943810 aaatacatcatttatgcaatgaatcaaaaatgtcaaat 47943847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 53225709 - 53225672
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  53225709 aaatacatcatttatgcaatgaatcaaaaaagtaaaat 53225672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 48361119 - 48361051
Alignment:
Q  49 caaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||||||| |||  ||||||||| |||||||||||| | |||||||||||| |||| | ||||||    
T  48361119 caaaatacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccggagggagta 48361051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 2549067 - 2549129
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||||||||||||||||| ||||||| ||  |||||| || || ||||||||||||||||||    
T  2549067 taattaattaaatgcacaaaatttaagaaaaagtttctacttttg-gttgcttaacatgtgccc 2549129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 37991550 - 37991499
Alignment:
Q  52 aatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||||| ||||||||||||||| | |||| | ||||||||||||    
T  37991550 aatacatcatttatacaatgaatcaaaaaatttaaatgtttcttataaatag 37991499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 45096657 - 45096708
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaata 102  Q
    ||||| |||||||||||||| ||||||||||||||||| | | |||||||||    
T  45096657 aaatatatcatttatgcaataaatcaaaaaagtcaaatgttttttataaata 45096708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 50685672 - 50685735
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    ||||||||| |||||||||| || |||| ||||||||||||| ||  |||||||| ||||||||    
T  50685672 taattaattgaatgcacaaaattcaagaaaatatttctatttttgaattgcttaaaatgtgccc 50685735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 42169124 - 42169178
Alignment:
Q  49 caaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||||||| |||| |||| |||| |||||||||||| | ||||||||||||    
T  42169124 caaaatacatcaattattcaataaatctaaaaagtcaaatttttcttataaatag 42169178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 13529430 - 13529491
Alignment:
Q  118 attaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgccc 179  Q
    |||||||||||| ||||| ||||||| || ||||||| || || |||||||||||| |||||    
T  13529430 attaattaaatgaacaaaatttaagaaaaaatttctacttttgagttgcttaacatatgccc 13529491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 16412299 - 16412242
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccg 108  Q
    ||||| |||| |||| ||||||||| |||||||||| | | |||||||||||||||||    
T  16412299 aaatatatcaattattcaatgaatctaaaaagtcaattttttcttataaatagaaccg 16412242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 55951727 - 55951666
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatg 112  Q
    |||||||||||||||  || |||| ||||||||||||||| | |||||||||  ||||||||    
T  55951727 aaatacatcatttatataacgaattaaaaaagtcaaatatttattataaataagaccgaatg 55951666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 8347712 - 8347644
Alignment:
Q  49 caaaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||||||| | |  ||||||||| |||||||||||| | |||||||||||| | || ||||||||    
T  8347712 caaaatacatcaatcactcaatgaatctaaaaagtcaaatttttcttataaataggagcggatggagta 8347644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 28176 - 28101
Alignment:
Q  28 tatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaat--caaaaaagtcaaatatgtcttataaata 102  Q
    |||||||| ||||||||| | |||| |||||||||||||||||||||  ||||||||| |||||| |||||||||||    
T  28176 tatcttgtctaaaatatagatcaaa-tacatcatttatgcaatgaatcacaaaaaagttaaatatttcttataaata 28101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 16612 - 16678
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagta 117  Q
    |||||||| |||||| |||||||||||||||||||||  | |||||||||||  |||||| ||||||    
T  16612 aaatacattatttatacaatgaatcaaaaaagtcaaacgtttcttataaataagaccgaacggagta 16678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 16739 - 16679
Alignment:
Q  27 gtatcttgtttaaaatataaaccaaaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    ||||||||| || |||||| |||||| |||||  ||||||||||||||||||||||||||||    
T  16739 gtatcttgtctagaatatagaccaaa-tacatattttatgcaatgaatcaaaaaagtcaaat 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 156833 - 156766
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaa 118  Q
    ||||| ||| |||||||||||||| |||||||| |||| | |||||||||||| |||| | |||||||    
T  156833 aaatatatcgtttatgcaatgaattaaaaaagttaaatgtttcttataaataggaccggagggagtaa 156766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 50666 - 50604
Alignment:
Q  116 taattaattaaatgcacaaactttaagagaatatttctatttctgtgttgcttaacatgtgcc 178  Q
    |||| ||||||||||||||| ||| |||||||||||||  || || ||| |||||||||||||    
T  50666 taatcaattaaatgcacaaaattttagagaatatttcttcttttgggtttcttaacatgtgcc 50604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 1598 - 1561
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  1598 aaatgcatcatttatgcaacgaatcaaaaaagtcaaat 1561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 1520 - 1556
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaat 88  Q
    |||||||||||||||||| |||||||||||||||||||    
T  1520 aaatacatcatttatgca-tgaatcaaaaaagtcaaat 1556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 71914 - 71845
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatagaaccgaatggagtaatt 120  Q
    |||||||| |||||| ||||||||||||||| | |||  | |||||||||||| | |||| |||||||||    
T  71914 aaatacataatttatacaatgaatcaaaaaaattaaaattttcttataaataggatcgaagggagtaatt 71845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 5336 - 5285
Alignment:
Q  51 aaatacatcatttatgcaatgaatcaaaaaagtcaaatatgtcttataaatag 103  Q
    |||||||| ||||||||||| ||| ||||||||||||| | ||||||||||||    
T  5336 aaatacataatttatgcaatcaat-aaaaaagtcaaatgtttcttataaatag 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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