View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20962_low_20 (Length: 290)

Name: NF20962_low_20
Description: NF20962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20962_low_20
NF20962_low_20
[»] chr5 (26 HSPs)
chr5 (11-290)||(3114015-3114294)
chr5 (109-237)||(37873588-37873716)
chr5 (87-237)||(35310477-35310627)
chr5 (16-237)||(27336722-27336944)
chr5 (136-228)||(25663009-25663101)
chr5 (26-237)||(32269663-32269875)
chr5 (87-234)||(15291954-15292101)
chr5 (108-237)||(13166859-13166988)
chr5 (87-228)||(33691983-33692124)
chr5 (87-227)||(43115386-43115525)
chr5 (16-237)||(43129563-43129784)
chr5 (138-228)||(38875676-38875766)
chr5 (87-228)||(14423716-14423857)
chr5 (31-237)||(35455985-35456192)
chr5 (16-187)||(433371-433543)
chr5 (140-220)||(26212564-26212644)
chr5 (163-228)||(34335375-34335440)
chr5 (141-234)||(32230489-32230582)
chr5 (161-237)||(42921726-42921802)
chr5 (180-230)||(430638-430688)
chr5 (152-213)||(8858969-8859030)
chr5 (138-228)||(8100590-8100680)
chr5 (158-230)||(14436536-14436605)
chr5 (184-234)||(14723269-14723319)
chr5 (136-230)||(9829331-9829423)
chr5 (166-231)||(26577407-26577472)
[»] chr4 (31 HSPs)
chr4 (16-237)||(31847116-31847338)
chr4 (11-230)||(53619622-53619842)
chr4 (114-228)||(55933417-55933531)
chr4 (16-231)||(50000781-50000998)
chr4 (101-237)||(56462049-56462184)
chr4 (87-237)||(132414-132566)
chr4 (142-223)||(23255747-23255828)
chr4 (115-228)||(48656866-48656979)
chr4 (117-237)||(30940697-30940816)
chr4 (113-228)||(12918326-12918441)
chr4 (87-237)||(25504324-25504472)
chr4 (99-237)||(26521517-26521655)
chr4 (121-238)||(50462908-50463025)
chr4 (118-237)||(600651-600770)
chr4 (139-237)||(34107674-34107774)
chr4 (70-200)||(53170573-53170703)
chr4 (117-228)||(12053451-12053562)
chr4 (101-228)||(16957580-16957707)
chr4 (161-237)||(43849350-43849426)
chr4 (183-230)||(24719970-24720017)
chr4 (174-237)||(50483211-50483274)
chr4 (73-183)||(38535500-38535610)
chr4 (139-237)||(46440869-46440967)
chr4 (152-228)||(28739943-28740020)
chr4 (185-237)||(3330025-3330077)
chr4 (243-279)||(45661655-45661691)
chr4 (182-237)||(7536594-7536649)
chr4 (167-213)||(46391323-46391369)
chr4 (152-214)||(52022166-52022228)
chr4 (167-228)||(6865828-6865889)
chr4 (158-231)||(45386060-45386133)
[»] chr6 (25 HSPs)
chr6 (87-237)||(33220639-33220789)
chr6 (116-237)||(17249262-17249383)
chr6 (87-237)||(959609-959759)
chr6 (87-230)||(357645-357788)
chr6 (87-235)||(45605-45753)
chr6 (30-237)||(4206466-4206674)
chr6 (87-237)||(34304525-34304675)
chr6 (87-231)||(28008915-28009062)
chr6 (30-179)||(32115776-32115926)
chr6 (87-237)||(34415465-34415615)
chr6 (26-213)||(12401384-12401572)
chr6 (113-221)||(34168913-34169021)
chr6 (131-237)||(24016366-24016472)
chr6 (99-225)||(34554217-34554343)
chr6 (157-237)||(4165920-4166000)
chr6 (16-227)||(29337939-29338147)
chr6 (16-169)||(20693457-20693610)
chr6 (87-228)||(28543413-28543554)
chr6 (141-230)||(3714953-3715042)
chr6 (135-228)||(28625968-28626062)
chr6 (147-230)||(6225108-6225191)
chr6 (162-231)||(7200540-7200607)
chr6 (245-286)||(28009096-28009137)
chr6 (90-214)||(13398113-13398237)
chr6 (246-286)||(29338189-29338229)
[»] chr1 (27 HSPs)
chr1 (87-237)||(34644595-34644745)
chr1 (70-237)||(19035476-19035643)
chr1 (31-220)||(50161288-50161478)
chr1 (26-237)||(28040993-28041205)
chr1 (30-237)||(29169664-29169871)
chr1 (77-237)||(25375751-25375911)
chr1 (86-236)||(42919890-42920039)
chr1 (11-237)||(45659498-45659726)
chr1 (117-228)||(31737281-31737392)
chr1 (87-228)||(2764517-2764658)
chr1 (31-238)||(37200011-37200217)
chr1 (162-227)||(21473042-21473107)
chr1 (136-235)||(20259774-20259873)
chr1 (28-237)||(4861857-4862067)
chr1 (139-237)||(22346924-22347022)
chr1 (113-230)||(16500070-16500187)
chr1 (138-237)||(2898731-2898833)
chr1 (141-234)||(36486918-36487011)
chr1 (138-214)||(23043929-23044005)
chr1 (87-206)||(37932146-37932264)
chr1 (188-237)||(24177540-24177589)
chr1 (148-229)||(50314613-50314694)
chr1 (142-209)||(35387643-35387710)
chr1 (176-237)||(7213279-7213341)
chr1 (167-201)||(19035424-19035458)
chr1 (195-237)||(47459711-47459753)
chr1 (245-286)||(38731566-38731607)
[»] chr8 (23 HSPs)
chr8 (11-237)||(35739838-35740064)
chr8 (89-228)||(38815332-38815471)
chr8 (87-230)||(39434703-39434846)
chr8 (87-237)||(500256-500406)
chr8 (15-237)||(25021669-25021892)
chr8 (87-237)||(3187998-3188148)
chr8 (70-237)||(24125057-24125224)
chr8 (117-237)||(6592604-6592724)
chr8 (28-231)||(8619849-8620047)
chr8 (102-237)||(10189572-10189707)
chr8 (116-230)||(4073571-4073685)
chr8 (152-222)||(8882371-8882441)
chr8 (134-230)||(28196228-28196324)
chr8 (117-197)||(37517163-37517243)
chr8 (141-237)||(6618313-6618409)
chr8 (114-190)||(11611199-11611275)
chr8 (149-227)||(10556283-10556361)
chr8 (241-286)||(25021919-25021964)
chr8 (135-280)||(42922103-42922247)
chr8 (132-216)||(4699919-4700002)
chr8 (199-238)||(43824017-43824056)
chr8 (158-220)||(39671170-39671232)
chr8 (115-172)||(8390234-8390291)
[»] chr7 (30 HSPs)
chr7 (87-230)||(28517215-28517358)
chr7 (30-228)||(4501296-4501495)
chr7 (87-237)||(21326766-21326916)
chr7 (11-237)||(43856903-43857130)
chr7 (30-236)||(45613712-45613919)
chr7 (99-237)||(32584630-32584768)
chr7 (70-234)||(982981-983145)
chr7 (30-228)||(5825311-5825508)
chr7 (125-237)||(19277322-19277434)
chr7 (86-237)||(27521500-27521651)
chr7 (87-237)||(2904394-2904544)
chr7 (70-230)||(3676675-3676836)
chr7 (141-237)||(30216040-30216136)
chr7 (102-237)||(22198015-22198150)
chr7 (102-237)||(22239671-22239806)
chr7 (99-237)||(24527618-24527756)
chr7 (152-237)||(42295177-42295262)
chr7 (137-233)||(10905151-10905246)
chr7 (157-228)||(40726478-40726549)
chr7 (93-229)||(9281066-9281201)
chr7 (93-229)||(9292037-9292172)
chr7 (99-187)||(33202405-33202493)
chr7 (117-237)||(34067820-34067939)
chr7 (99-222)||(25186876-25186999)
chr7 (99-228)||(34772819-34772946)
chr7 (117-185)||(1249667-1249735)
chr7 (29-230)||(38839360-38839564)
chr7 (245-286)||(43856831-43856872)
chr7 (152-224)||(43383211-43383283)
chr7 (186-234)||(48539213-48539261)
[»] chr3 (26 HSPs)
chr3 (70-235)||(44198798-44198963)
chr3 (94-230)||(46940705-46940841)
chr3 (31-237)||(7900887-7901094)
chr3 (11-237)||(53785738-53785965)
chr3 (99-237)||(39583169-39583307)
chr3 (24-237)||(49017992-49018206)
chr3 (131-235)||(37132971-37133075)
chr3 (87-237)||(52741439-52741590)
chr3 (113-237)||(26772787-26772911)
chr3 (103-237)||(4473090-4473224)
chr3 (70-237)||(13582539-13582705)
chr3 (87-214)||(37992384-37992511)
chr3 (116-237)||(5338672-5338796)
chr3 (166-231)||(38670887-38670952)
chr3 (99-230)||(38146092-38146223)
chr3 (160-237)||(32546824-32546901)
chr3 (117-237)||(3443270-3443390)
chr3 (117-237)||(38978757-38978877)
chr3 (158-237)||(7502010-7502090)
chr3 (143-230)||(54508367-54508455)
chr3 (166-228)||(51234654-51234716)
chr3 (143-214)||(43123197-43123268)
chr3 (171-228)||(52411903-52411960)
chr3 (235-279)||(7502109-7502153)
chr3 (16-61)||(29862003-29862048)
chr3 (158-230)||(35484691-35484763)
[»] scaffold0490 (1 HSPs)
scaffold0490 (70-237)||(6363-6529)
[»] scaffold0148 (1 HSPs)
scaffold0148 (87-237)||(33279-33428)
[»] chr2 (22 HSPs)
chr2 (24-227)||(23484802-23485006)
chr2 (30-237)||(41867778-41867986)
chr2 (26-237)||(2888545-2888753)
chr2 (87-228)||(5532457-5532598)
chr2 (117-237)||(4413024-4413144)
chr2 (70-230)||(9685326-9685486)
chr2 (11-234)||(19161634-19161858)
chr2 (99-237)||(28225029-28225167)
chr2 (87-196)||(44686490-44686598)
chr2 (11-237)||(17344667-17344894)
chr2 (140-220)||(1296031-1296111)
chr2 (158-234)||(13147096-13147175)
chr2 (87-228)||(27502400-27502540)
chr2 (152-233)||(34814812-34814893)
chr2 (161-224)||(18744956-18745019)
chr2 (99-228)||(3825764-3825894)
chr2 (167-237)||(33612555-33612625)
chr2 (182-236)||(2886638-2886692)
chr2 (152-230)||(5679314-5679392)
chr2 (187-234)||(20142753-20142800)
chr2 (87-164)||(9674946-9675023)
chr2 (162-215)||(44720374-44720427)
[»] scaffold0224 (1 HSPs)
scaffold0224 (86-236)||(18292-18441)
[»] scaffold0186 (1 HSPs)
scaffold0186 (87-237)||(10389-10543)
[»] scaffold1768 (1 HSPs)
scaffold1768 (30-234)||(54-259)
[»] scaffold0110 (1 HSPs)
scaffold0110 (11-237)||(47390-47617)
[»] scaffold0031 (1 HSPs)
scaffold0031 (135-228)||(49449-49542)
[»] scaffold0009 (1 HSPs)
scaffold0009 (99-237)||(103135-103272)
[»] scaffold0493 (1 HSPs)
scaffold0493 (168-237)||(8525-8594)
[»] scaffold0119 (1 HSPs)
scaffold0119 (125-209)||(16191-16275)
[»] scaffold0470 (1 HSPs)
scaffold0470 (141-237)||(7631-7727)
[»] scaffold0085 (1 HSPs)
scaffold0085 (152-205)||(37391-37444)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 11 - 290
Target Start/End: Original strand, 3114015 - 3114294
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattagggg 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114015 atcaacacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattagggg 3114114  T
Q  111 ttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatacc 210  Q
    | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114115 tcggggcttttacggtaggacaggcagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatacc 3114214  T
Q  211 atttgtttttgacacttttggtttccttctacaaagttcaaagggtcatgcacaacaatgtcataactccaaggtctgtg 290  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3114215 atttgtttttgacacttttggtttccttctacagagttcaaagggtcatgcacaacaatgtcataactccaaggtctgtg 3114294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 37873588 - 37873716
Alignment:
Q  109 ggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttata 208  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  37873588 ggttggggcttttacggtaggacagacagctctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttata 37873687  T
Q  209 ccatttgtttttgacacttttggtttcct 237  Q
    ||||||| ||||||||||||||| |||||    
T  37873688 ccatttgcttttgacacttttggcttcct 37873716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 35310627 - 35310477
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| |||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  35310627 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacaaccctaaaagatgcgtcaagcaaagtggccaaacatgagaaagcatgttc 35310528  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| ||||||||||| || |||||||||||| || |||||    
T  35310527 tgacaatcaacatgcttttataccatctgcttttgacactttcggcttcct 35310477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 27336944 - 27336722
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 114  Q
    ||||||| | ||| |||||||||||||||  ||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||||||| ||    
T  27336944 cacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtggg 27336845  T
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    |||||||||  |||| |||||||||||||||||||| |||| |||||||| ||||||||||||| | |||||||||| |||||||  |||||||||||||    
T  27336844 ggcttttacaataggacagacagccctaaaagttgcgtcaagcaaagtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccattt 27336745  T
Q  215 gtttttgacacttttggtttcct 237  Q
    | ||||||||||| ||| |||||    
T  27336744 gcttttgacacttgtggcttcct 27336722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 25663009 - 25663101
Alignment:
Q  136 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||    
T  25663009 agccctaaaagctgcatcaaacaaagtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacacttt 25663101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 32269663 - 32269875
Alignment:
Q  26 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 124  Q
    |||||||||||||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||| |||||| || ||| |||||| |    
T  32269663 tgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttctggaattaggtgtcgggccttttatg 32269762  T
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    ||||| ||  || ||||||||| |||||||| |||||||| ||||||||||||||  |||||||||| |||||| | |||||||||||||| |||||| |    
T  32269763 gtaggacatgcaaccctaaaagctgcatcaaccaaagtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgcttttgata 32269862  T
Q  225 cttttggtttcct 237  Q
    |||| | ||||||    
T  32269863 ctttcgatttcct 32269875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 15291954 - 15292101
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  | |||||| | || ||| ||||| ||||| | |||||| |||||||||| || ||||||||||||||||||||||||||| | |||||    
T  15291954 tttcaccacttgttggattaagtgtcgggccttttgcggtatgacagacaaccctaaaagtggcgtcaaacaaagtggccaaacatgagaaaacgtgttc 15292053  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    ||||| ||||||||||||||||| |||||||||| |||||||| ||||    
T  15292054 tgacaatcaacatgtttttatacaatttgttttttacacttttagttt 15292101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 13166859 - 13166988
Alignment:
Q  108 gggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttat 207  Q
    ||||| ||||||||||||| || |||||| ||||||||  ||| |||| ||||||||| |||||||||||||| |||||||||| |||||||| ||||||    
T  13166859 gggttagggcttttacggtgggacagacaaccctaaaatctgcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttat 13166958  T
Q  208 accatttgtttttgacacttttggtttcct 237  Q
    |||||||| |||||||||||| || |||||    
T  13166959 accatttgcttttgacactttcggcttcct 13166988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 33691983 - 33692124
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| ||| ||| |||||||| ||| |||| |||||||||||||||||| ||| | ||||     
T  33691983 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacaggcaggcctaaaagctgcgtcaagcaaagtggccaaacatgacaaaacgtgtta 33692082  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||    
T  33692083 tgacaatcaacatgcttttgtaccatttgcttttgacacttt 33692124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 43115386 - 43115525
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| | ||| |||| || |||| |||||||||| ||||     
T  43115386 tttcaccactcatgggattagaggtcggggcttttacggtaggatagacagccctaaaagttgcgt-aaataaagcggtcaaatatgagaaagcgtgttt 43115484  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacactt 227  Q
    ||||| |||||||| ||| ||| |||||| |||||||||||    
T  43115485 tgacaatcaacatgctttcatagcatttgcttttgacactt 43115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 43129784 - 43129563
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggg 115  Q
    ||||||| ||||||||||||||| |||||  |||| || ||||||| |  ||| |||  | |||||  |  ||||||||||  | ||||||||||| ||     
T  43129784 cacttaggcatgcagatgttatgatgtacggatggataggaggaaaaatgcatgtgtgaaattgactggggtttcaccacttgttggattaggggtcgga 43129685  T
Q  116 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 215  Q
     |||||||||| || ||  ||| |||||||| ||| |||| |||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||||||    
T  43129684 acttttacggttggacattcagtcctaaaagatgcgtcaagcaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttg 43129585  T
Q  216 tttttgacacttttggtttcct 237  Q
     |||||||| ||| ||||||||    
T  43129584 cttttgacattttcggtttcct 43129563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 38875766 - 38875676
Alignment:
Q  138 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||||||  |||||||||||||| | |||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  38875766 ccctaaaaactgcatcaaacaaagcgaccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacacttt 38875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 14423857 - 14423716
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||||||||| || ||  |||| || ||||| ||| || ||||||||  ||| |||| ||||||| || ||||||||||||| |||||    
T  14423857 tttcaccacttgtgggattaggtgtcggacctttaaccgtaggacaggcaaccctaaaaaatgcgtcaagcaaagtgaccgaacatgagaaagcgtgttc 14423758  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||| |||||||| |||||||||||||| ||||||||||||    
T  14423757 tgacaatcaacatgcttttataccatttgcttttgacacttt 14423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 35456192 - 35455985
Alignment:
Q  31 atgttatggtgtacaaatgggtaagagg-aaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 129  Q
    ||||||||||||||| ||||||| |||| ||| |  ||| ||| ||||||||| |  |||  |||||| | |||||||||||  || |||||||||||||    
T  35456192 atgttatggtgtacagatgggtaggaggtaaatatgcatgtgtggacttgaccggggttttgccactcgtaggattaggggtccggccttttacggtagg 35456093  T
Q  130 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 229  Q
    | ||  ||||| ||||||||  | ||  ||| ||| ||||||||||||||| |||||| ||| |||||||| ||||||||| |||| |||||||| ||||    
T  35456092 gtaggtagcccaaaaagttgtgttaagtaaaatggtcaaacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaatttt 35455993  T
Q  230 ggtttcct 237  Q
    || |||||    
T  35455992 ggcttcct 35455985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 433543 - 433371
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacact-catttgtagacttgaccagtatttcaccactcatgggattaggggttgg 114  Q
    ||||||| ||||| |||||||||||||||| ||||||  |||||||   | ||| ||| ||||||||| |  |||||||||   |||| ||| |||| ||    
T  433543 cacttaggcatgcggatgttatggtgtacagatgggttggaggaaaatatgcatgtgtggacttgaccggggtttcaccacctgtgggtttaagggtagg 433444  T
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttct 187  Q
    |||||||||||||||  ||||| || |||||| ||  |||| |||||||||||||||||||||||| ||||||    
T  433443 ggcttttacggtaggatagacaaccttaaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttct 433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 26212564 - 26212644
Alignment:
Q  140 ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 220  Q
    ||||||||||| |||| |||||||||||||||||||||||| | |||||||  |||||||| |||||||||||||||||||    
T  26212564 ctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttgttttt 26212644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 34335440 - 34335375
Alignment:
Q  163 ggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34335440 ggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttgtttttgacacttt 34335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 32230489 - 32230582
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    |||||||||| |||| ||||||| ||||||||||||||   |||||||||| |||||| | ||||||||||| ||  || ||||||||||||||    
T  32230489 taaaagttgcgtcaagcaaagtgaccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccatctgcgttcgacacttttggttt 32230582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 42921802 - 42921726
Alignment:
Q  161 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||| |||||| |||||| | |||||||||| |||||||| |||||||||||||| || ||||||||| ||||||||    
T  42921802 gtggtcaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttcct 42921726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 430688 - 430638
Alignment:
Q  180 catgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  430688 catgttctgacaatcaacatgcttttataccatttgcttttgacacttttg 430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 8859030 - 8858969
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 213  Q
    |||| |||||| | ||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  8859030 tcaagcaaagtagtcaaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 8100680 - 8100590
Alignment:
Q  138 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||||| | ||||||||  ||| ||| ||||||||||||| | |||| ||||| |  ||||| ||||||||||||||||| |||||||||    
T  8100680 ccctaaacgctgcatcaagtaaaatggtcaaacatgagaaaacgtgttgtgacaatttacatgcttttataccatttgtttgtgacacttt 8100590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 14436605 - 14436536
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||||||||||||||| ||| | |||||| |   |||||||||||||||| |||||||||||||||| ||||    
T  14436605 aaagtggccaaacatgaaaaaacgtgttctaa---tcaacatgtttttatatcatttgtttttgacacctttg 14436536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 14723269 - 14723319
Alignment:
Q  184 ttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||||||    
T  14723269 ttctgacaatcaacatgcttttatatcatttgttttttacacttttggttt 14723319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 9829331 - 9829423
Alignment:
Q  136 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||||||||||||| | || ||||||||| || ||||| |||   |||| ||||| |||||||| ||||||||||||| | |||||||||||||    
T  9829331 agccctaaaagttgcgt-aagcaaagtggctaa-catgataaaatgtgttttgacaatcaacatgcttttataccatttatatttgacacttttg 9829423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 26577407 - 26577472
Alignment:
Q  166 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 231  Q
    ||||||| ||||||  ||||| |||  ||||||||||||||||| |||||| ||| ||||||||||    
T  26577407 caaacataagaaagtgtgttccgactatcaacatgtttttatacaatttgtgtttcacacttttgg 26577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 31847338 - 31847116
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 114  Q
    ||||||| | ||||||| |||||||||||| |||| |  ||||||| ||  ||| ||| |||||||| ||  ||||||||||  |||| |||||||| ||    
T  31847338 cacttaggcctgcagatattatggtgtacagatggattggaggaaaacatgcatgtgtggacttgactagggtttcaccacttgtgggtttaggggtggg 31847239  T
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    ||||||||| ||||| ||| |||||||||||| ||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  31847238 ggcttttacagtaggacaggcagccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccattt 31847139  T
Q  215 gtttttgacacttttggtttcct 237  Q
    | ||||||||||||||| |||||    
T  31847138 gcttttgacacttttggcttcct 31847116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 53619842 - 53619622
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| ||||||| | |||| ||||||||||||||  ||| ||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||| |    
T  53619842 atcaacacttaggcctgcatatgttatggtgtacggatgagttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttagag 53619743  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    || ||||||||||| ||||| ||| || ||||||||| ||| |||| |||||||||||||||||||||| | |||||||||| |||||||| ||||||||    
T  53619742 gtgggggcttttacagtaggacaggcaaccctaaaagctgcgtcaagcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatac 53619643  T
Q  210 catttgtttttgacacttttg 230  Q
    |||||||||||||||||||||    
T  53619642 catttgtttttgacacttttg 53619622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 55933417 - 55933531
Alignment:
Q  114 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 213  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||| |||||||| ||||||||||||    
T  55933417 gggcttttacggtaggacagtcagccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccatt 55933516  T
Q  214 tgtttttgacacttt 228  Q
    || ||||||||||||    
T  55933517 tgcttttgacacttt 55933531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 50000781 - 50000998
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 114  Q
    ||||||| | ||| |||||||||||||||  ||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| | |||||| ||    
T  50000781 cacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggttaaggggtggg 50000880  T
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg-tttttataccatt 213  Q
    ||||||||||||||| |||||||| ||||||| ||| |||| |||||||| ||||||||||||||| |||||||||| |||||||| |||| |||| |||    
T  50000881 ggcttttacggtaggacagacagctctaaaagctgcgtcaagcaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatt 50000980  T
Q  214 tgtttttgacacttttgg 231  Q
    || |||||||||||||||    
T  50000981 tgcttttgacacttttgg 50000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 56462049 - 56462184
Alignment:
Q  101 ggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg 200  Q
    ||||||||||| | | |||||||||| |   ||||  ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| ||||||||    
T  56462049 ggattaggggtcgagacttttacggttgtatagaccaccctaaaagttgcgtcaaacaaagtggc-aaacatgataaagcgtgttctgacaatcaacatg 56462147  T
Q  201 tttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||||||||||| |||||||||||||||||    
T  56462148 tttttataccatttgttttagacacttttggtttcct 56462184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 132566 - 132414
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggt--agggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgt 184  Q
    ||||||||||  | ||||||||||| ||| ||||||||||  ||| ||| |||||||||||| ||| |||| |||| |||| |||||||||||| | |||    
T  132566 tttcaccacttgttggattaggggtcgggacttttacggtgtaggacaggcagccctaaaagctgcgtcaagcaaaatggcaaaacatgagaaatcgtgt 132467  T
Q  185 tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  132466 tctgacaatcaacatgcttttataccatttgttttttacactttcggtttcct 132414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 23255828 - 23255747
Alignment:
Q  142 aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgac 223  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||    
T  23255828 aaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttgtttttgac 23255747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 48656866 - 48656979
Alignment:
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    ||||||||| ||| | |||||||||||||||||| ||||||  ||| ||| ||||||||||||||  |||| || || |||| |||||||||||||||||    
T  48656866 ggcttttacagtatgacagacagccctaaaagtttcatcaagtaaaatggacaaacatgagaaagtgtgttatgtcaatcaaaatgtttttataccattt 48656965  T
Q  215 gtttttgacacttt 228  Q
    ||||||||||||||    
T  48656966 gtttttgacacttt 48656979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 30940697 - 30940816
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    |||||||  |||| |||||| ||||||||||||| ||||  ||||||| ||||||||||||||| |||||||||| |||||||| |||||||||| |||     
T  30940697 cttttaccataggacagacaaccctaaaagttgcgtcaagtaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttatacca-ttgc 30940795  T
Q  217 ttttgacacttttggtttcct 237  Q
    |||||||||||| | ||||||    
T  30940796 ttttgacactttcgatttcct 30940816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 12918326 - 12918441
Alignment:
Q  113 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 212  Q
    ||||||||||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| ||||| | |||||||||| ||||||   |||||||| ||    
T  12918326 ggggcttttacggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactat 12918425  T
Q  213 ttgtttttgacacttt 228  Q
    ||  ||||||||||||    
T  12918426 ttacttttgacacttt 12918441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 25504472 - 25504324
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||||||||| ||  || ||||||||||| | ||| || ||||||| |||||||||| |||| ||| ||||||||||||| | |||||    
T  25504472 tttcaccacttgtgggattaggcgtcaggccttttacggtatgacaggcaaccctaaa-gttgcatcaagcaaa-tggtcaaacatgagaaaacgtgttc 25504375  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    | ||| || ||||||||||||||| |||| |||||||| ||||||||||||    
T  25504374 taacaatcgacatgtttttataccgtttgcttttgacatttttggtttcct 25504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 26521655 - 26521517
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||||||||||  |  |||||| |||||| || ||| ||||||||||||| |||||||||||||| |||||||| ||| | |||| ||||| ||||||    
T  26521655 tgggattaggggtcagaccttttatggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggctaaacatgaaaaaacgtgttatgacaatcaaca 26521556  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || ||||||| ||| || |||  ||||||||||||||||    
T  26521555 tgcttttatatcatatgctttcaacacttttggtttcct 26521517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 50462908 - 50463025
Alignment:
Q  121 tacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 220  Q
    ||||||||| ||||||||| |||||||||| |||| |||  || |||||||||||||||  | ||| |||| |||||||| ||| |||||||||| ||||    
T  50462908 tacggtaggacagacagccttaaaagttgcgtcaagcaagatgaccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgctttt 50463007  T
Q  221 gacacttttggtttcctt 238  Q
    |||||||||| |||||||    
T  50463008 gacacttttgatttcctt 50463025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 600651 - 600770
Alignment:
Q  118 ttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtt 217  Q
    |||||| ||||| |||||| |||||||||||   |||| ||||||| |||||||||||||| | |||||| ||| | |||||| |||||||||||||| |    
T  600651 ttttactgtaggacagacaaccctaaaagttatgtcaagcaaagtgaccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgct 600750  T
Q  218 tttgacacttttggtttcct 237  Q
    |||| |||||| ||||||||    
T  600751 tttgtcactttcggtttcct 600770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 34107674 - 34107774
Alignment:
Q  139 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgt--tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 236  Q
    ||||||| |||| |||||| |||||||||||||||||||| | |||  || || | |||||||||||||||||||||||||||||||||||| | |||||    
T  34107674 cctaaaaattgcgtcaaacgaagtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcc 34107773  T
Q  237 t 237  Q
    |    
T  34107774 t 34107774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 53170703 - 53170573
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  |  ||||||||||| |||||||||| || ||  ||||||| ||| | ||| ||||||||||||| |  | |   ||||| ||||||    
T  53170703 tgtagacttgactggggtttcaccactcgtgggattaggtgtcggaccttttacagtatgacaggcagccctaaaagtcgtgttaggtaaagtagccaaa 53170604  T
Q  170 catgagaaagcatgttctgacagtcaacatg 200  Q
    ||||||||||| |||||||||||||||||||    
T  53170603 catgagaaagcgtgttctgacagtcaacatg 53170573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 12053562 - 12053451
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    ||||||| ||||| || ||||| ||||||| ||| ||||||||||| | ||||||||||||| | |||||| ||| |||| | ||||||||| ||||||     
T  12053562 cttttacagtaggacaaacagctctaaaagctgcgtcaaacaaagttgtcaaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgc 12053463  T
Q  217 ttttgacacttt 228  Q
    ||| ||| ||||    
T  12053462 tttcgactcttt 12053451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 16957707 - 16957580
Alignment:
Q  101 ggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg 200  Q
    ||||||||||| ||| || |||| |||||  || ||| |||||||||||| |  | |||| || |||||||||||||||  || ||||| | ||||||||    
T  16957707 ggattaggggtcgggcctcttacagtaggataggcagtcctaaaagttgcgtagagcaaaatgaccaaacatgagaaagtgtgctctgataatcaacatg 16957608  T
Q  201 tttttataccatttgtttttgacacttt 228  Q
     || ||||||||||| ||||||||||||    
T  16957607 cttatataccatttgcttttgacacttt 16957580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 43849350 - 43849426
Alignment:
Q  161 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||| |||||||| ||||| || |  ||||||| |||||||| |||||| |||||||||||||| |||||    
T  43849350 gtggccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttcct 43849426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 24720017 - 24719970
Alignment:
Q  183 gttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  24720017 gttctgacaatcaacatgtttttatatcatttgtgtttgacacttttg 24719970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 50483211 - 50483274
Alignment:
Q  174 agaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| | |||||||| |||||||| |||||||||||||| ||| |||||||| ||||||||    
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctttcgacactttcggtttcct 50483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 38535500 - 38535610
Alignment:
Q  73 agacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacat 172  Q
    ||||||||| ||  |||||| |||  ||||||| | ||||||||||||||  ||||  |||||||| ||||||||||  || |||||||||| |||| ||    
T  38535500 agacttgactagggtttcactacttgtgggatttgaggttggggcttttaatgtagaacagacagctctaaaagttgtgtctaacaaagtggtcaaatat 38535599  T
Q  173 gagaaagcatg 183  Q
     ||||||||||    
T  38535600 aagaaagcatg 38535610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 46440869 - 46440967
Alignment:
Q  139 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||  | ||||||||||||| ||||||| | ||||  |||||| ||| | |||| ||||||||| |||||| |||||||||||| || |||||    
T  46440869 cctaaaagtaacgtcaaacaaagtggtcaaacataaaaaagtgtgttctaacaattaacacgtttttatatcatttgcttttgacactttcggcttcct 46440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 28740020 - 28739943
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt-ttttataccatttgtttttgacacttt 228  Q
    ||||| |||||||||||||| ||||||   |||| ||||||| ||||||| ||||||||||||| | |||||||||||    
T  28740020 tcaaataaagtggccaaacacgagaaattgtgttgtgacagttaacatgtgttttataccatttatgtttgacacttt 28739943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 3330077 - 3330025
Alignment:
Q  185 tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| |||||||| |||||||| ||||| ||||||||||||||| |||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttcct 3330025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 45661691 - 45661655
Alignment:
Q  243 aaagttcaaagggtcatgcacaacaatgtcataactc 279  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45661691 aaagttcaaagggtcatacacaacaatgtcataactc 45661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 7536594 - 7536649
Alignment:
Q  182 tgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||| ||||| ||||||||||||||||| |||||||||||||| |||  |||||||    
T  7536594 tgttttgacaatcaacatgtttttatacaatttgtttttgacaatttcagtttcct 7536649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 46391323 - 46391369
Alignment:
Q  167 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 213  Q
    ||||| |||||| |||||||| |||| ||||||||||||||||||||    
T  46391323 aaacacgagaaaacatgttctcacagccaacatgtttttataccatt 46391369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 52022228 - 52022166
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    |||| ||||||| ||||| |||||| |   ||||||||||||| |||||||||||||||||||    
T  52022228 tcaatcaaagtgaccaaaaatgagagaaagtgttctgacagtcgacatgtttttataccattt 52022166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 6865828 - 6865889
Alignment:
Q  167 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||| |||||| | |||||||||  |||||||| ||||||| |||||| ||||||||||||    
T  6865828 aaacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacacttt 6865889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 45386060 - 45386133
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 231  Q
    ||||||| ||||||| ||||||| |||||||||| ||||  | ||||||||||||||   ||||| ||||||||    
T  45386060 aaagtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttacatttgaaacttttgg 45386133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 33220639 - 33220789
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||| |||      
T  33220639 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacagctctaaaagctgcatcaagcaaagtggccaaacatgagaaagcgtgtgt 33220738  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| |||||||||||||| |||||||||||| || |||||    
T  33220739 tgacaatcaacatgcttttataccatttgcttttgacactttcggcttcct 33220789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 17249262 - 17249383
Alignment:
Q  116 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 215  Q
    |||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  17249262 gcttttacggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttg 17249361  T
Q  216 tttttgacacttttggtttcct 237  Q
     ||||||||||||||| |||||    
T  17249362 cttttgacacttttggcttcct 17249383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 959759 - 959609
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    |||||||||| ||||||||||| || ||| ||||||||||||| || ||| ||||||||||||  |||| ||||||||| || ||||||||| | |||||    
T  959759 tttcaccacttatgggattaggtgtcgggccttttacggtaggacaaacaaccctaaaagttgtgtcaagcaaagtggctaaccatgagaaaacgtgttc 959660  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| ||||||||| |||||||||||||||||||||| ||| ||||||||    
T  959659 tgacaatcaacatgtctttataccatttgtttttgacattttcggtttcct 959609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 357645 - 357788
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| || |||||||||||||| ||| |||||||||||| | | |||| |||||||||||||||||||||||| |||||    
T  357645 tttcaccacttgtgggtttaggggtcggtgcttttacggtaggacaggcagccctaaaagcttcgtcaagcaaagtggccaaacatgagaaagcgtgttc 357744  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||| | |||||| ||||||| | ||||||||| |||||||||    
T  357745 tgacaatgaacatgcttttataacctttgtttttaacacttttg 357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 45605 - 45753
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||||||||| || ||  ||||||| ||||| ||| |||| ||||||| |||||||| |||||||  ||||||||||||| | |||||    
T  45605 tttcaccacttgtgggattaggtgtcggaccttttaccgtaggacaggcagctctaaaagctgcatcaagcaaagtgatcaaacatgagaaaacgtgttc 45704  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 235  Q
    ||||| |||||||| |||||| |||||||||||||||||||| ||||||    
T  45705 tgacaatcaacatgcttttattccatttgtttttgacactttcggtttc 45753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 237
Target Start/End: Original strand, 4206466 - 4206674
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    |||||||||||||||||||||||  ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||||||||||  |  |  ||||||||||||    
T  4206466 gatgttatggtgtacaaatgggttggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggcatcagaccttttacggtag 4206565  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | ||  ||||| ||||||| || |||| ||||||||| |||||||||||||| |||||||||| | |||||| ||||||| |||||| ||||||||||||    
T  4206566 gacatgcagccttaaaagtggcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacacttt 4206665  T
Q  229 tggtttcct 237  Q
     || |||||    
T  4206666 cgggttcct 4206674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 34304675 - 34304525
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| ||||| || |||||||||||||| || |||  ||||||||||| ||| |||| |||| |  |||||||||||||||| |||||    
T  34304675 tttcaccacttgtgggtttaggagtcggggcttttacggttggacagctagccctaaaagctgcgtcaagcaaaataaccaaacatgagaaagcgtgttc 34304576  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| |||||||||||||| |||||||||||| || |||||    
T  34304575 tgacaatcaacatgcttttataccatttgcttttgacactttgggcttcct 34304525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 28008915 - 28009062
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||  || ||||||||| | | |||| ||||| || ||||||||||||||| |||||    
T  28008915 tttcaccactcgtgggattaggggtcggggcttttacggtaggacatgcaaccctaaaagctacgtcaagcaaagcggtcaaacatgagaaagcttgttc 28009014  T
Q  187 tgacagtc---aacatgtttttataccatttgtttttgacacttttgg 231  Q
    | ||| ||   || ||| |||||||||||||| |||||||||||||||    
T  28009015 taacaatcaagaatatggttttataccatttgcttttgacacttttgg 28009062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 32115926 - 32115776
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    |||||||||||||||| ||| ||| ||||||| ||  ||| ||||||||||||| |  ||||| |||| ||||||||||| || |||  ||||||| |||    
T  32115926 gatgttatggtgtacagatgagtaggaggaaaacatgcatgtgtagacttgaccggggtttcatcacttatgggattaggtgtcgggcattttacgttag 32115827  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaag 179  Q
    | ||  ||||| |||||||||| ||||||||||||||||||||||||||||    
T  32115826 gacatgcagccttaaaagttgcgtcaaacaaagtggccaaacatgagaaag 32115776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 34415615 - 34415465
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||| | | |||||||||||  || |||||||||||||  || || || || ||| ||| |||| |||| |||| |||||||||||||  |||||    
T  34415615 tttcaccacacgttggattaggggtcaggacttttacggtaggataggcatccttacaagctgcgtcaagcaaaatggcgaaacatgagaaagtgtgttc 34415516  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| |||||| |||||||||||||||||||| ||||||||    
T  34415515 tgacaatcaacatgcttttatgccatttgtttttgacactttaggtttcct 34415465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 12401572 - 12401384
Alignment:
Q  26 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 124  Q
    |||| ||||||||||||||  ||||||| ||||||| ||  ||| |||||||||||   |  |||||||||| ||||||||| || |  ||||||||| |    
T  12401572 tgcaaatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgattggggtttcaccacttatgggattatggttcagggcttttatg 12401473  T
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 213  Q
    ||||| ||  |||| ||||||||||| ||||||||||||||||||||| ||| ||| |||| ||  | |||||||| || |||||||||    
T  12401472 gtaggacaagcagcactaaaagttgcgtcaaacaaagtggccaaacataagatagcgtgttttgctaatcaacatgcttatataccatt 12401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 34169021 - 34168913
Alignment:
Q  113 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 212  Q
    ||||||||||| ||||| ||  || |||||||| |||| |||| |||||||||||||||||||||||||||||  ||||  ||||||| |||||||||||    
T  34169021 ggggcttttaccgtaggacatgcaaccctaaaatttgcgtcaagcaaagtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccat 34168922  T
Q  213 ttgtttttg 221  Q
    ||| |||||    
T  34168921 ttgcttttg 34168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 24016472 - 24016366
Alignment:
Q  131 cagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||||| || |||||||||||||||  ||| | | ||||||||||||||| |||||| ||| ||||||||||||||||||||||| | |||| | |||||    
T  24016472 cagacaaccgtaaaagttgcatcaagtaaaatagtcaaacatgagaaagcttgttctcacaatcaacatgtttttataccatttgctattgatagttttg 24016373  T
Q  231 gtttcct 237  Q
    |||||||    
T  24016372 gtttcct 24016366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 34554217 - 34554343
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    ||||||||||| |  |||||||||  ||||| |||||| | ||||||||||| |||| ||||  | |||||||||||||||| |||||||| | |||| |    
T  34554217 tgggattagggatcagggcttttaaagtaggtcagacaacactaaaagttgcgtcaagcaaaacgaccaaacatgagaaagcgtgttctgataatcaaga 34554316  T
Q  199 tgtttttataccatttgtttttgacac 225  Q
    ||||||||||||||||  |||||||||    
T  34554317 tgtttttataccatttacttttgacac 34554343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 4165920 - 4166000
Alignment:
Q  157 caaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||| |||||||||||||| |||||||||| |||||||| ||||||| |||||| |||||||||||| || |||||    
T  4165920 caaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttcct 4166000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 29337939 - 29338147
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 114  Q
    ||||||| | ||||||||||||||||| || ||||||| ||||||| ||  ||| ||| ||||||| |    ||| |||||||    |||||| ||| ||    
T  29337939 cacttaggcctgcagatgttatggtgtgcagatgggtaggaggaaaacatgcatgtgtggacttgatcgaggttttaccactc----gattagtggtcgg 29338034  T
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    ||||||||||||||| || |||  | |||||| ||  |||| |||||  ||||||||||||||| | |||||| ||| |||||||| | |||||||||||    
T  29338035 ggcttttacggtaggacaaacaatcataaaagatgtgtcaagcaaagctgccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccattt 29338134  T
Q  215 gtttttgacactt 227  Q
    | |||||||||||    
T  29338135 gcttttgacactt 29338147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 20693457 - 20693610
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggg 115  Q
    ||||||| | ||||||| |||||||||||| ||||||| |||||||   |  | |||  |||||| |||  ||||||||||| ||||||||| |||  |     
T  20693457 cacttaggcctgcagatattatggtgtacagatgggtaggaggaaaacatgctatgtgaacttgatcagggtttcaccactcgtgggattagaggtctga 20693556  T
Q  116 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    |||||||| ||||  || || |||||||| ||||||||||||||||||||||||    
T  20693557 gcttttacagtagaacatacggccctaaaggttgcatcaaacaaagtggccaaa 20693610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 28543554 - 28543413
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  ||||||||| |||  || ||||||||||| | ||| ||||| ||||||| || |||| |||||||||||||||||||||| | ||||     
T  28543554 tttcaccacttgtgggattagaggtcaggacttttacggtaagacaggcagccttaaaagtcgcgtcaagcaaagtggccaaacatgagaaatcgtgttt 28543455  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||| | |||  ||| | |||||| ||||| ||||||||||||    
T  28543454 tgaaaatcactatgctcttatactatttgattttgacacttt 28543413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 3715042 - 3714953
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||||||||  ||||||||| |||  |||||||||||| | |||||| ||| | |||||||||||||| ||| |||||||||||||||||    
T  3715042 taaaagttgtgtcaaacaaaatggttaaacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgtttttgacacttttg 3714953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 28626062 - 28625968
Alignment:
Q  135 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgttttt-ataccatttgtttttgacacttt 228  Q
    ||||||| |||| ||| ||||  || ||||| ||||| |||||| | |||||||||| ||||||| ||||| ||||||||||||||| |||||||    
T  28626062 cagcccttaaagctgcgtcaagtaaggtggctaaacacgagaaaacgtgttctgacaatcaacattttttttataccatttgttttttacacttt 28625968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 6225191 - 6225108
Alignment:
Q  147 ttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||| ||||| ||||||| |||||||||||||   |||| ||||| |||||||| || |||  ||||||| |||||||||||||    
T  6225191 ttgcgtcaaataaagtggtcaaacatgagaaattttgttgtgacaatcaacatgcttatatgtcatttgtgtttgacacttttg 6225108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 7200540 - 7200607
Alignment:
Q  162 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 231  Q
    ||||||||||||||||| |  ||||  ||| |||||||||||||||  ||||||| ||||||||||||||    
T  7200540 tggccaaacatgagaaatcgagttcaaacaatcaacatgtttttat--catttgtgtttgacacttttgg 7200607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 28009096 - 28009137
Alignment:
Q  245 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 286  Q
    ||||||||||||||| |||||||||||||| ||||| |||||    
T  28009096 agttcaaagggtcatacacaacaatgtcatgactcctaggtc 28009137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 214
Target Start/End: Original strand, 13398113 - 13398237
Alignment:
Q  90 caccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctga 189  Q
    ||||| || ||||||||| ||||| | ||||||||||||   |||||   ||| |||||| |||||  |||  || |||| |||| ||||||||||| ||    
T  13398113 caccattcctgggattagcggttgagacttttacggtagaatagacaattctacaagttgtatcaagtaaaacggtcaaatatgaaaaagcatgttccga 13398212  T
Q  190 cagtcaacatgtttttataccattt 214  Q
    || ||||||| ||||||||| ||||    
T  13398213 caatcaacatatttttatactattt 13398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 29338189 - 29338229
Alignment:
Q  246 gttcaaagggtcatgcacaacaatgtcataactccaaggtc 286  Q
    ||||||||||||||||||| ||||||||| ||||| |||||    
T  29338189 gttcaaagggtcatgcacatcaatgtcatgactcctaggtc 29338229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 34644745 - 34644595
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| ||  || ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  34644745 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacaagcaaccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagcgtgttc 34644646  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||  | ||||| ||||||||||||||||||||||||||| || |||||    
T  34644645 tgacaacctacatgcttttataccatttgtttttgacactttcggcttcct 34644595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 19035643 - 19035476
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  | ||||||||| |  |||||||||| || ||  ||||||| ||||||||| |||||||||||| ||| |||| |||||||||||||    
T  19035643 tgtagacttgactgggatttcaccagttgtgggattaggtgtcggaccttttaccgtagggcaggcagccctaaaagctgcgtcaagcaaagtggccaaa 19035544  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||  |||||||||||  ||||||||    
T  19035543 catgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacacttacggtttcct 19035476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 220
Target Start/End: Original strand, 50161288 - 50161478
Alignment:
Q  31 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 129  Q
    ||||||||||||||   |||||||||| ||| ||  ||| ||| ||||| |||  ||||||||||||| ||| |||||||| || | |||||||||||||    
T  50161288 atgttatggtgtacggttgggtaagagaaaaacatgcatgtgtggacttaaccgatatttcaccactcgtggaattaggggctgagacttttacggtagg 50161387  T
Q  130 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 220  Q
     |||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||| ||| |||||||| ||||||| ||||| |||||    
T  50161388 acagacaaccctaaaagttgcgtcaagcaaagtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcattttttttt 50161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 28040993 - 28041205
Alignment:
Q  26 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 124  Q
    |||||||||||||||||||| ||||||| | ||||| ||  | | ||||||||||||  |  |||||| |||  |||||||||| || ||  |||||||     
T  28040993 tgcagatgttatggtgtacagatgggtaggtggaaaacatgcttgtgtagacttgactggggtttcactacttgtgggattaggtgtcggaccttttacc 28041092  T
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    |||||  || |||| ||||||   || ||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||||||    
T  28041093 gtaggataggcagctctaaaatccgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgaca 28041192  T
Q  225 cttttggtttcct 237  Q
    |||| ||||||||    
T  28041193 ctttcggtttcct 28041205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 237
Target Start/End: Original strand, 29169664 - 29169871
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    |||||||||||||||  || |||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  |||||||||| || ||| ||||||| ||||    
T  29169664 gatgttatggtgtacggataggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccactt-tgggattaggtgtcgggccttttaccgtag 29169762  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | ||||||||||| |||||||  ||||  || ||||||||||| |||||| | |||||||||| |||||||| |||||||||||||| ||||||||||||    
T  29169763 gacagacagcccttaaagttgtgtcaagtaaggtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 29169862  T
Q  229 tggtttcct 237  Q
     ||||||||    
T  29169863 cggtttcct 29169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 25375751 - 25375911
Alignment:
Q  77 ttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgaga 176  Q
    ||||||||  |||||| |||| | |||||||||||  | |||||||||||||| |||||| | | ||||||||| |||| ||||||| |||||||||| |    
T  25375751 ttgaccagggtttcactactcgtcggattaggggtcagagcttttacggtaggacagacaactccaaaagttgcgtcaagcaaagtgaccaaacatgaca 25375850  T
Q  177 aagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || |||||||| ||  ||||||||||||||||||||||| | ||||||||||||| |||||    
T  25375851 aaacatgttcttaccatcaacatgtttttataccatttgctattgacacttttggcttcct 25375911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 42920039 - 42919890
Alignment:
Q  86 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    ||||||| |||| |||||||| |||| || ||||||| | |||| || ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  42920039 atttcactactcgtgggattacgggtcggagcttttatgataggacaaacaaccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgtt 42919941  T
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 236  Q
    || ||| |||||||||||||||  ||| || |||||||||||||| |||||    
T  42919940 ctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttcc 42919890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 45659498 - 45659726
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| |||| || |||||| ||||||| ||||||| ||||||| ||||||| ||  |||  |||||||||||  |  ||||||||||  ||||||||||     
T  45659498 atcaacactcaggcatgcacatgttatagtgtacagatgggtaggaggaaaacatgcatgcgtagacttgactggggtttcaccacttgtgggattaggt 45659597  T
Q  110 gttggggcttttacggtagggcagacagccct-aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttata 208  Q
     | ||| ||||||| ||||| ||  ||||||| ||||| ||| ||||  || ||||||||||| |||||||| |||||||||| |||||||| |||||||    
T  45659598 atcgggccttttaccgtaggacatgcagcccttaaaagctgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttata 45659697  T
Q  209 ccatttgtttttgacacttttggtttcct 237  Q
    ||||||| |||||||||||| | ||||||    
T  45659698 ccatttgcttttgacactttcgatttcct 45659726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 31737281 - 31737392
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    ||||||||||| |  | || ||||||||||  || |||| |||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  31737281 cttttacggtaagataaacggccctaaaagcggcgtcaagcaaagtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgt 31737380  T
Q  217 ttttgacacttt 228  Q
    ||||||||||||    
T  31737381 ttttgacacttt 31737392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 2764658 - 2764517
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| ||||||||||| ||||||| ||||||  || ||| |||||||||||  ||| ||||||||| ||||||||||||| | |||||    
T  2764658 tttcaccacttgtgggtttaggggttggtgcttttatggtaggataggcagtcctaaaagttgtgtcagacaaagtggtcaaacatgagaaaacgtgttc 2764559  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
     |||| |||||||| |||||| ||||||  ||||||||||||    
T  2764558 cgacaatcaacatgcttttatgccattttcttttgacacttt 2764517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 238
Target Start/End: Complemental strand, 37200217 - 37200011
Alignment:
Q  31 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 129  Q
    ||||||||| |||| |||||||||||||||| ||  ||| ||| ||||||||   | ||||||||||| |||||||| ||   || ||||||||  ||||    
T  37200217 atgttatggggtaccaatgggtaagaggaaaacatgcatgtgt-gacttgactgatgtttcaccactcgtgggattaaggaccggagcttttacaatagg 37200119  T
Q  130 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 229  Q
     ||  ||||| |||||||| | ||||  ||||||| ||||||| ||||||||||| || ||| |||| ||||||||||||||||||||||| ||||||||    
T  37200118 acatgcagccataaaagttacgtcaagtaaagtggtcaaacataagaaagcatgtgctaacaatcaatatgtttttataccatttgttttt-acactttt 37200020  T
Q  230 ggtttcctt 238  Q
    || ||||||    
T  37200019 ggcttcctt 37200011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 21473107 - 21473042
Alignment:
Q  162 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 227  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  21473107 tggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactt 21473042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 20259774 - 20259873
Alignment:
Q  136 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 235  Q
    ||||||||||| | | |||| ||||||||  ||| |||||||||| |||||||||| |||||||||||||||||||||| || |||||||||| ||||||    
T  20259774 agccctaaaagctacgtcaagcaaagtggttaaaaatgagaaagcgtgttctgacaatcaacatgtttttataccatttattgttgacactttcggtttc 20259873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 237
Target Start/End: Original strand, 4861857 - 4862067
Alignment:
Q  28 cagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggt 126  Q
    |||||||||||||||||  ||||||| ||| ||| ||  ||| ||| || |||||  || ||||||||||  | |||||||||||   | | |||| |||    
T  4861857 cagatgttatggtgtacggatgggtaggagaaaaacatgcatgtgtggatttgactggtgtttcaccacttgttggattaggggtcttgacatttatggt 4861956  T
Q  127 agggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacact 226  Q
    ||| ||||||||| |||||||||| ||||  ||| ||| ||||||||||||||| | ||||||||  ||||||  |||||||| ||||| ||||||||||    
T  4861957 aggacagacagccttaaaagttgcgtcaagtaaaatggtcaaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacact 4862056  T
Q  227 tttggtttcct 237  Q
    || | ||||||    
T  4862057 ttcgatttcct 4862067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 22347022 - 22346924
Alignment:
Q  139 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||   |||| ||||||||||||| |||||||||| |||||||||| ||||||||  |||||||| |||| |||||||||||| ||||||||    
T  22347022 cctaaaagttatgtcaagcaaagtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttcct 22346924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 16500187 - 16500070
Alignment:
Q  113 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 212  Q
    ||||||||||||||||| ||||||  |||||||||||| |||   |||||||||||| || ||||| |||||||| ||| | ||||||  ||||||| ||    
T  16500187 ggggcttttacggtaggacagacaatcctaaaagttgcgtcacgtaaagtggccaaatataagaaaacatgttctaacaattaacatgcctttatactat 16500088  T
Q  213 ttgtttttgacacttttg 230  Q
    ||| ||||||||||||||    
T  16500087 ttgcttttgacacttttg 16500070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 2898833 - 2898731
Alignment:
Q  138 ccctaaaagttgcatcaaacaaagtggccaaacatgagaa----agcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 233  Q
    ||||||||| |||||||| |||||||||||||||||||||    ||| |||||||||| |||| | |||||||||||||||| |||||| ||||| ||||    
T  2898833 ccctaaaagatgcatcaagcaaagtggccaaacatgagaaagtgagcgtgttctgacaatcaata-gtttttataccatttgcttttgatactttcggtt 2898735  T
Q  234 tcct 237  Q
    ||||    
T  2898734 tcct 2898731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 36487011 - 36486918
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    ||||| |||||||||  ||||||| |||| |||||||||| |||| ||||| |||| || ||||||||  ||||| ||||||||||||||||||    
T  36487011 taaaaattgcatcaagtaaagtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgcttttgacacttttggttt 36486918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 23044005 - 23043929
Alignment:
Q  138 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    |||| |||| |||||||| ||||||||||||| |||||||| || || || ||| |||||||| |||||||||||||    
T  23044005 ccctcaaagctgcatcaagcaaagtggccaaatatgagaaaacaagtactcacaatcaacatgcttttataccattt 23043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 37932146 - 37932264
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  ||||||||||||    ||||||||| ||| | |||||||||||||||||||  |||| |||| ||| |||| | |||||||  |||||    
T  37932146 tttcaccacttgtgggattaggggccaaggcttttacagtaagacagacagccctaaaagttgtgtcaagcaaaatggtcaaatacgagaaag-gtgttc 37932244  T
Q  187 tgacagtcaacatgttttta 206  Q
    ||||| ||||| ||||||||    
T  37932245 tgacaatcaacgtgttttta 37932264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 24177540 - 24177589
Alignment:
Q  188 gacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||| ||||||| |||||||||||||||||||||||| ||| ||||||||    
T  24177540 gacaatcaacatatttttataccatttgtttttgacagtttcggtttcct 24177589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 50314613 - 50314694
Alignment:
Q  148 tgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 229  Q
    ||||| || |||||||| ||||||||| ||| | |||||| ||| |||||||| |||||||||||||  |||||||| ||||    
T  50314613 tgcataaagcaaagtggtcaaacatgacaaaacttgttctcacaatcaacatgcttttataccatttacttttgacattttt 50314694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 35387643 - 35387710
Alignment:
Q  142 aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    |||| ||||||||| |||||||||||||||||| ||||  |||||||||  |||||| | ||||||||    
T  35387643 aaaatttgcatcaagcaaagtggccaaacatgaaaaagtgtgttctgacgatcaacaagcttttatac 35387710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 7213341 - 7213279
Alignment:
Q  176 aaagcatgttctgacagtcaacatgttttt-ataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||||||| | | ||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  7213341 aaagcatgttctgataattaacatgttttttatatcatttatttttgacactttcggtttcct 7213279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 19035458 - 19035424
Alignment:
Q  167 aaacatgagaaagcatgttctgacagtcaacatgt 201  Q
    ||||||||||||||||||||||||| |||||||||    
T  19035458 aaacatgagaaagcatgttctgacaatcaacatgt 19035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 47459753 - 47459711
Alignment:
Q  195 aacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||||||||||||| |||||| |||||||| |||||    
T  47459753 aacatgtttttataccatttgcttttgatacttttggcttcct 47459711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 38731607 - 38731566
Alignment:
Q  245 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 286  Q
    ||||||||||||||||||||| |||||||| ||||| |||||    
T  38731607 agttcaaagggtcatgcacaataatgtcatgactcctaggtc 38731566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 6e-40; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 35739838 - 35740064
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| ||||||| ||||||||||||||||||||  |||||||| ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||||||| ||    
T  35739838 atcaacacttaggcatgcagatgttatggtgtatgaatgggtaggaggaaaacatgcatgtgtggacttgactggggtttcaccactagtgggattaagg 35739937  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
     | ||| ||||||||||||| |||||| ||||||||||||  | || ||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  35739938 -tcgggccttttacggtaggacagacatccctaaaagttgtgttaagcaaagtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatac 35740036  T
Q  210 catttgtttttgacacttttggtttcct 237  Q
     ||| | ||||||||||||  |||||||    
T  35740037 aattagcttttgacactttcagtttcct 35740064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 38815471 - 38815332
Alignment:
Q  89 tcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctg 188  Q
    ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||   |  |||||||||||||||||||||||||||| |||||||    
T  38815471 tcaccacttgtgggattaggggtcggggcttttatggtaggacagacagccctaaaagccacgccaaacaaagtggccaaacatgagaaagcgtgttctg 38815372  T
Q  189 acagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||| |||||||| |||||||||||||| ||||||||||||    
T  38815371 acaatcaacatgcttttataccatttgcttttgacacttt 38815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 87 - 230
Target Start/End: Complemental strand, 39434846 - 39434703
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| | ||||||||| ||||| |||  ||| ||||||||||| |||| |||||||||||||||||||||||| |||||    
T  39434846 tttcaccacttgtgggtttaggggtggaggcttttacagtaggacaggaagctctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttc 39434747  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  39434746 tgacaatcaacatgcttttataccatttgtttttgacacttttg 39434703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 500406 - 500256
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||||||||| || ||| ||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||| | |||||    
T  500406 tttcaccacttgtgggattaggtgtcgggccttttacggtaggaccgacagccctaaaagttgcgtcaagcaaagtggccaaacatgagaaaacgtgttc 500307  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| |||||||||||||  |||||||| ||| ||||||||    
T  500306 tgacaatcaacatgcttttataccatttacttttgacattttcggtttcct 500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 237
Target Start/End: Original strand, 25021669 - 25021892
Alignment:
Q  15 tcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttg 113  Q
    |||||||| | |||||||||||||||||||  ||||||| ||||||| ||  ||| ||| ||||||||| |  ||||||||||  ||||||||||||| |    
T  25021669 tcacttaggcctgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtggacttgaccggagtttcaccacttgtgggattaggggtcg 25021768  T
Q  114 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 213  Q
      | |||||| ||| | || ||||||||||||||||  |||| ||||||||  ||| |||||||||  |||||| ||| |||||||||||||||||||||    
T  25021769 atgtttttacagtatgacatacagccctaaaagttgtgtcaagcaaagtggtgaaatatgagaaagtgtgttctcacaatcaacatgtttttataccatt 25021868  T
Q  214 tgtttttgacacttttggtttcct 237  Q
    |  |||||||| |||||| |||||    
T  25021869 ttcttttgacatttttggcttcct 25021892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 3188148 - 3187998
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagcc-ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    ||||||||||  |||| |||||| | ||||||||||||||||| |||  |||| |||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  3188148 tttcaccacttgtgggtttaggg-tcggggcttttacggtaggacaggaagcctctaaaagttgcatcaagcaaagtggcaaaacatgaggaagcgtgtt 3188050  T
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||| |||||||| |||||||||||||| |||||| ||||| || |||||    
T  3188049 ctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttcct 3187998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24125224 - 24125057
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  |  ||||||||||  |||||||| | || | | |||||||||| || ||  |||||||||||| |||||||| |||| ||||||||    
T  24125224 tgtagacttgactggggtttcaccacttgtgggattatgcgtcgtgccttttacggtgggacaagcagccctaaaagctgcatcaagcaaaatggccaaa 24125125  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||| || ||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||    
T  24125124 catgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcct 24125057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 6592724 - 6592604
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    |||||||| ||||  |||||| | |||||| ||| |||| |||||||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||||     
T  6592724 cttttacgataggatagacagtcgtaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgc 6592625  T
Q  217 ttttgacacttttggtttcct 237  Q
    ||||||||||||  |||||||    
T  6592624 ttttgacactttcagtttcct 6592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 8620047 - 8619849
Alignment:
Q  28 cagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggta 127  Q
    ||||||||||||||||| ||||||||||||||||     || |||  |||||||  |  ||||||||||  ||||||||| | | | | |||||||| ||    
T  8620047 cagatgttatggtgtacgaatgggtaagaggaaa-----atgtgtgaacttgactggggtttcaccacttgtgggattagagatcgtgacttttacgata 8619953  T
Q  128 gggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 227  Q
    |  |||||||||||||||||||| ||||  ||| ||| ||||||||| ||||| | || ||||| ||||| || ||||||||||||||||||| ||| ||    
T  8619952 gaacagacagccctaaaagttgcgtcaagtaaaatggtcaaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacattt 8619853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 10189707 - 10189572
Alignment:
Q  102 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 201  Q
    |||||||||||  |||||||| |||||| || |||  ||||||||||||  |||  ||||| | |||||| ||||||||||||||||||| |||||||||    
T  10189707 gattaggggttaaggcttttatggtaggacatacattcctaaaagttgcgccaattaaagtagtcaaacaagagaaagcatgttctgacaatcaacatgt 10189608  T
Q  202 ttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| ||||||  ||||||| |||||| |||||    
T  10189607 ttttatatcatttgcatttgacatttttggcttcct 10189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 4073685 - 4073571
Alignment:
Q  116 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 215  Q
    ||||||||||| |  |||||| ||||||||||||||||||||||||||| |||||| |||||| | |||| |  || |||||||| |||||||| |||||    
T  4073685 gcttttacggtggaacagacaaccctaaaagttgcatcaaacaaagtggtcaaacaagagaaaacgtgttttaccaatcaacatgattttatacaatttg 4073586  T
Q  216 tttttgacacttttg 230  Q
      |||||||||||||    
T  4073585 catttgacacttttg 4073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 8882441 - 8882371
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 222  Q
    |||| |||||||||||||||||||||||| |||||||||| |||| ||| ||||| |||||||||||||||    
T  8882441 tcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttgtttttga 8882371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 28196324 - 28196228
Alignment:
Q  134 acagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||| |||||||  ||||||||  |||| ||| |||||||||||||  |||| ||| | | ||||||||||||||||||||||||||||||||||||    
T  28196324 acagtcctaaaaactgcatcaagtaaagcggctaaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttg 28196228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 37517243 - 37517163
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaac 197  Q
    ||||||| ||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  37517243 cttttaccgtaggacagacagctctaaaagctgcatcaagcaaagtggccaaacatgagaaagggtgttccgacaatcaac 37517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 6618409 - 6618313
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||| ||||| | ||| |  |||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||||||||||||  |||||||    
T  6618409 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcct 6618313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 11611199 - 11611275
Alignment:
Q  114 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgac 190  Q
    ||||||||||| || |  ||||| ||||||||||||  ||||| |||||||||||| ||||||||||||||||||||    
T  11611199 gggcttttacgataagatagacatccctaaaagttgtgtcaaataaagtggccaaatatgagaaagcatgttctgac 11611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 10556283 - 10556361
Alignment:
Q  149 gcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 227  Q
    |||||||| ||||||| ||||||||||||| ||| |||||| | ||||||||||||||||  | |||| ||||||||||    
T  10556283 gcatcaaagaaagtggtcaaacatgagaaaacatattctgaaaatcaacatgtttttatataaattgtatttgacactt 10556361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 25021919 - 25021964
Alignment:
Q  241 acaaagttcaaagggtcatgcacaacaatgtcataactccaaggtc 286  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  25021919 acaaagttcaaagggtcatgcacaacaatgtcatatctcctaggtc 25021964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 42922103 - 42922247
Alignment:
Q  135 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    ||||| |||||||||| ||||||||| ||| ||||  ||||||| | |||| ||||| |||| ||| ||||| | ||||||  |||||||||||||| ||    
T  42922103 cagccataaaagttgcgtcaaacaaaatggtcaaatttgagaaaacgtgttttgacaatcaaaatgcttttaaatcatttgcctttgacacttttggctt 42922202  T
Q  235 ccttctacaaagttcaaagggtcatgcacaacaatgtcataactcc 280  Q
    |||   | | |||| |||  || |||||||||||||||||||||||    
T  42922203 cctaacatagagtttaaa-agttatgcacaacaatgtcataactcc 42922247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 4700002 - 4699919
Alignment:
Q  132 agacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    ||||| |||| |||||||  |||| ||||||||||||||||||  |||| |||||| ||| | |||||||||||| |||||||||    
T  4700002 agacaaccctcaaagttgtgtcaagcaaagtggccaaacatga-taagcgtgttctcacaattaacatgtttttacaccatttgt 4699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 43824056 - 43824017
Alignment:
Q  199 tgtttttataccatttgtttttgacacttttggtttcctt 238  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  43824056 tgtttttataccatttgcttttgacacttttggcttcctt 43824017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 39671170 - 39671232
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 220  Q
    |||||||||||||  |||||||| |||| ||||| | ||||||||||||||| |||| |||||    
T  39671170 aaagtggccaaaccagagaaagcgtgttttgacaattaacatgtttttatacaatttattttt 39671232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 8390291 - 8390234
Alignment:
Q  115 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacat 172  Q
    |||||||| | ||||||||||| |||||||| |||| | |||||||||| ||||||||    
T  8390291 ggcttttatgatagggcagacaaccctaaaaattgcgtaaaacaaagtgaccaaacat 8390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 28517215 - 28517358
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| ||||||||||| ||||| |||||| ||||||||| ||| |||| |||||||||||||||||||||||| ||||     
T  28517215 tttcaccacttgtgggtttaggggtgggggcttttacagtaggacagacaaccctaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttt 28517314  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
     |||| ||||||||||||||||||||||| ||||||||||||||    
T  28517315 agacaatcaacatgtttttataccatttgcttttgacacttttg 28517358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 4501495 - 4501296
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    |||||||||||||||  || |||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  |||||||||| || ||| ||||||| ||||    
T  4501495 gatgttatggtgtacggataggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggtgtcgggccttttaccgtag 4501396  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | || ||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||  ||||| ||||||||||||    
T  4501395 gacaaacaaccctaaaagctgcgtcaaacaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt 4501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 21326766 - 21326916
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||||||||| || ||  ||||||| ||||| || |||||||||||||  || |||| |||||||||||||||||||||||| |||||    
T  21326766 tttcaccacttgtgggattaggtgtcggaccttttaccgtaggacaaacagccctaaaagccgcgtcaagcaaagtggccaaacatgagaaagcgtgttc 21326865  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| |||||||| |||||||||||||| |||||||||||| | ||||||    
T  21326866 tgacaatcaacatgcttttataccatttgcttttgacactttcgatttcct 21326916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 43857130 - 43856903
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| ||||||| | |||||||||||||||||||  ||||||| ||| ||| ||  |||  || ||||||||  |  ||||||||||  |||||||||||    
T  43857130 atcaacacttaggcctgcagatgttatggtgtacggatgggtaggagaaaaacatacatgcgtggacttgacgggggtttcaccacttgtgggattaggg 43857031  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    || ||||||||||| ||||| |||||| |  |||||| ||| |||| ||||||||| | |||||||||||| |||| ||||| ||||||||  |||||||    
T  43857030 gtcggggcttttacagtaggacagacaacattaaaagatgcgtcaatcaaagtggctagacatgagaaagcgtgttttgacaatcaacatgcgtttatac 43856931  T
Q  210 catttgtttttgacacttttggtttcct 237  Q
     ||||| |||||||| ||||||||||||    
T  43856930 aatttgcttttgacatttttggtttcct 43856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 30 - 236
Target Start/End: Original strand, 45613712 - 45613919
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    ||||||||| ||||| |||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  | |||||||| || ||| ||||| | ||||    
T  45613712 gatgttatgatgtacgaatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtaggattaggtgtcgggcctttttccgtag 45613811  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | |||||| ||||||||||||| ||||  || ||| ||||||| | |||||  |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  45613812 gacagacaaccctaaaagttgcgtcaagtaaggtgaccaaacacgggaaagtgtgttctgacaatcaacatgtttttataccatttgattttgacacttt 45613911  T
Q  229 tggtttcc 236  Q
     |||||||    
T  45613912 cggtttcc 45613919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 32584768 - 32584630
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    ||||||||||||| |||| |||||||||||| ||  || |||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||| |    
T  32584768 tgggattaggggtcggggattttacggtaggacatgcaaccctaaaaattgcatcaaacaaagtggtcaaacatgagaaaacgtgttctgacaatcaaga 32584669  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || ||||| |||||||| ||||||||||||  |||||||    
T  32584668 tgcttttacaccatttgcttttgacactttatgtttcct 32584630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 983145 - 982981
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    |||||||||||| ||  ||| ||||||  |||||||||| || ||  ||||||  ||||| ||| ||||| |||||| ||| |||| |||||||||||||    
T  983145 tgtagacttgactagggtttaaccacttgtgggattaggtgtgggaccttttattgtaggacaggcagccataaaagctgcgtcaagcaaagtggccaaa 983046  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    ||||||||| | |||||||||| |||||||| |||||||||||||| |||||| ||||| |||||    
T  983045 catgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatactttcggttt 982981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 228
Target Start/End: Complemental strand, 5825508 - 5825311
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    ||||||||||||||| |||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||||||| | ||||||||||| ||    
T  5825508 gatgttatggtgtacgaatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcgaggcttttacggcag 5825409  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | |||  ||||||||||| |||||||| |||||||  ||||||||| || || |||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  5825408 gacaggaagccctaaaagctgcatcaagcaaagtg--caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacacttt 5825311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 19277434 - 19277322
Alignment:
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    ||||| ||| ||| |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||    
T  19277434 gtaggacaggcagtcctaaaagctgcgtcaagcaaagtagccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaca 19277335  T
Q  225 cttttggtttcct 237  Q
    |||| ||||||||    
T  19277334 ctttcggtttcct 19277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 27521651 - 27521500
Alignment:
Q  86 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    ||||||||| |  |||||||||| || ||| ||||||||||||| ||  || || |||||||||| | ||||||||||| ||||||||||||| | ||||    
T  27521651 atttcaccatttgtgggattaggtgtcgggccttttacggtaggacatgcacccttaaaagttgcgttaaacaaagtggtcaaacatgagaaaacgtgtt 27521552  T
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||| ||||||||  ||||||| ||||  |||||||||||||||||||||    
T  27521551 ctgacaatcaacatgcatttatacaatttacttttgacacttttggtttcct 27521500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 2904544 - 2904394
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  || | ||||||| || ||| |||||||||||  |||||| |||||||||| | |||| |||| | | |||||||||||||||||||||    
T  2904544 tttcaccacttgtgaggttaggggatgaggcatttacggtaggatagacagtcctaaaagttacgtcaagcaaaatagtcaaacatgagaaagcatgttc 2904445  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
     |||| |||||||| ||||||| ||||||||| |||||  ||||| |||||    
T  2904444 cgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttcct 2904394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 3676836 - 3676675
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagac-agccctaaaagttgcatcaaacaaagtggccaa 168  Q
    ||||||||||||  |  ||||||||||  |||||||||| || ||  ||||||| ||||| ||| | ||||||||||| ||| |||| |||||||| |||    
T  3676836 tgtagacttgactggggtttcaccacttgtgggattaggtgtcggtccttttaccgtaggacaggccagccctaaaagctgcgtcaagcaaagtggtcaa 3676737  T
Q  169 acatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||| ||||||| |||||| ||  |||| ||| |||||||||||||| ||||||||||||||    
T  3676736 acatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgacacttttg 3676675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 30216040 - 30216136
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||| ||| |||| |||| ||| |||| |||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  30216040 taaaagctgcgtcaagcaaaatggtcaaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttcct 30216136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 22198150 - 22198015
Alignment:
Q  102 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 201  Q
    ||||||| || ||| |||||| |||||| |   ||||||||||||  || |||| ||||||| |||||||||||||||  |||||  ||| |||||||||    
T  22198150 gattaggtgtcgggccttttatggtaggacgcgcagccctaaaagcggcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgt 22198051  T
Q  202 ttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||||||| ||||| |||||| ||||||||    
T  22198050 ttttataccatttgcttttgtcactttcggtttcct 22198015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 22239671 - 22239806
Alignment:
Q  102 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 201  Q
    ||||||| || ||| |||||| |||||| |   ||||||||||||  || |||| ||||||| |||||||||||||||  |||||  ||| |||||||||    
T  22239671 gattaggtgtcgggccttttatggtaggacgcgcagccctaaaagcggcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgt 22239770  T
Q  202 ttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||||||| ||||| |||||| ||||||||    
T  22239771 ttttataccatttgcttttgtcactttcggtttcct 22239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 24527756 - 24527618
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||||||| || ||  ||||||| ||||| ||| ||||||||||||  |  ||||  |||||||  |||||||||||| | |||||||||| ||||||    
T  24527756 tgggattaggtgtcggaccttttaccgtaggacaggcagccctaaaagcagtgtcaagtaaagtgggaaaacatgagaaaacgtgttctgacaatcaaca 24527657  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || |||||||||||||| ||||||||||||  |||||||    
T  24527656 tgcttttataccatttgcttttgacactttcagtttcct 24527618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 42295177 - 42295262
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||| |||| ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| | ||||| ||||||||    
T  42295177 tcaagcaaaatggccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttgttttttatactttcggtttcct 42295262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 10905246 - 10905151
Alignment:
Q  137 gccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 233  Q
    |||||||||| ||| |||| ||||||||||||| ||||||||   |||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  10905246 gccctaaaagctgcgtcaagcaaagtggccaaatatgagaaaaagtgttctgacactcaacatg-ctttataccatttgcttttgacacttttggtt 10905151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 40726478 - 40726549
Alignment:
Q  157 caaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    |||||||||||||||| | |||   |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40726478 caaagtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacacttt 40726549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 9281066 - 9281201
Alignment:
Q  93 cactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacag 192  Q
    ||||| |||||||| | | | ||| |||||| ||||| |||||| ||||||||| |||||||| |||| | || |||||||||||||| |||||| |||     
T  9281066 cactcgtgggattatgtgatagggtttttacagtaggacagacaaccctaaaagctgcatcaagcaaactagc-aaacatgagaaagcgtgttctaacaa 9281164  T
Q  193 tcaacatgtttttataccatttgtttttgacactttt 229  Q
    |||||||| |||||||| |||||  ||||||| ||||    
T  9281165 tcaacatgcttttatactatttggatttgacattttt 9281201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 229
Target Start/End: Original strand, 9292037 - 9292172
Alignment:
Q  93 cactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacag 192  Q
    ||||| |||||||| | | | ||| |||||| ||||| |||||| ||||||||| |||||||| |||| | || |||||||||||||| |||||| |||     
T  9292037 cactcgtgggattatgtgatagggtttttacagtaggacagacaaccctaaaagctgcatcaagcaaactagc-aaacatgagaaagcgtgttctaacaa 9292135  T
Q  193 tcaacatgtttttataccatttgtttttgacactttt 229  Q
    |||||||| |||||||| |||||  ||||||| ||||    
T  9292136 tcaacatgcttttatactatttggatttgacattttt 9292172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 33202405 - 33202493
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttct 187  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||  ||||||| || ||| ||||||||||||||||||| || ||||||    
T  33202405 tgggattaggggttggggcttttacagtaggatagaaagccctggaagttgcgtccaactaagtggccaaacatgagaacgcgtgttct 33202493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 34067820 - 34067939
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    ||||||| || || |||||||||||  |||| || |||| | ||||| |||||||||||||||  |||| ||||| ||||||| ||| ||| ||||||||    
T  34067820 cttttactgtgggacagacagccctcgaagtcgcttcaagccaagtgaccaaacatgagaaagtgtgttttgacaatcaacat-tttctatgccatttgt 34067918  T
Q  217 ttttgacacttttggtttcct 237  Q
     ||||||||||||||||||||    
T  34067919 atttgacacttttggtttcct 34067939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 25186876 - 25186999
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||||||| || ||  ||||||| ||||| || | | ||||||||||||  ||||  ||||||| | ||||||||||||| ||||| || | ||||||    
T  25186876 tgggattaggtgtcggaccttttaccgtaggacataaaaccctaaaagttgtgtcaagtaaagtggtctaacatgagaaagcgtgttccgataatcaaca 25186975  T
Q  199 tgtttttataccatttgtttttga 222  Q
    ||||||| ||||||||| ||||||    
T  25186976 tgtttttctaccatttgcttttga 25186999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 34772946 - 34772819
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||||| | ||||||  |||||||||| |  || |||| ||||||||||  |||| |||||| |||||| |||||||||  ||||| |||| | || |    
T  34772946 tgggattatgtgttgggctttttacggtatgataggcagctctaaaagttg--tcaatcaaagtagccaaatatgagaaagtgtgttcggacaattaata 34772849  T
Q  199 tgtttttataccatttgtttttgacacttt 228  Q
    ||||||||||||||||| |||||| |||||    
T  34772848 tgtttttataccatttgcttttgaaacttt 34772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 1249735 - 1249667
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    |||||||||||||  ||||||||||||||  ||| ||||| ||||||| ||||||||||||||| ||||    
T  1249735 cttttacggtaggatagacagccctaaaacctgcgtcaaataaagtggtcaaacatgagaaagcgtgtt 1249667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 29 - 230
Target Start/End: Complemental strand, 38839564 - 38839360
Alignment:
Q  29 agatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    ||||||||||||||||  ||| ||||||| |||||  ||| ||| ||||||||    |||||| || |  ||||||| ||||| | | ||||||||| ||    
T  38839564 agatgttatggtgtacggatgtgtaagagaaaacatgcatgtgtggacttgactgagatttcatcattg-tgggatttggggtcgtgtcttttacggaag 38839466  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaa----catgtttttataccatttgtttttgaca 224  Q
      |||||| | ||||||||||| | ||| ||| | | |||||||||||||||||||| || || ||||    ||||||||||||  ||||| ||||||||    
T  38839465 aacagacaactctaaaagttgcgtaaaataaaatcgtcaaacatgagaaagcatgttatgtcaatcaacatgcatgtttttatataatttgcttttgaca 38839366  T
Q  225 cttttg 230  Q
    ||||||    
T  38839365 cttttg 38839360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 43856872 - 43856831
Alignment:
Q  245 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 286  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  43856872 agttcaaagggtcatgcacaacaatgtcatgactcctaggtc 43856831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 43383283 - 43383211
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    ||||| ||||||||||| |||||||||||||||||   || |||||||| |||||| |||||| | |||||||    
T  43383283 tcaaataaagtggccaaccatgagaaagcatgttccagcaatcaacatgcttttatgccatttatgtttgaca 43383211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 48539261 - 48539213
Alignment:
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    |||||| |||||||| |||||||||||||| |||||||||||| |||||    
T  48539261 ctgacaatcaacatgcttttataccatttgcttttgacactttcggttt 48539213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 44198963 - 44198798
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  |  ||||||||||  |||||||||| || ||  ||||||| ||||| ||| |||| ||||||||||| |||| |||||||||||||    
T  44198963 tgtagacttgactggggtttcaccacttgtgggattaggtgtcggaccttttaccgtaggtcaggcagctctaaaagttgcgtcaagcaaagtggccaaa 44198864  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 235  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||| |||||||||||| ||||||    
T  44198863 catgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttc 44198798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 46940705 - 46940841
Alignment:
Q  94 actcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagt 193  Q
    |||| ||||||||||||| | || ||||| |||||| |||||| | ||||||| ||| |||| |||||||||||||||| ||||| ||||||| |||| |    
T  46940705 actcgtgggattaggggtcgaggattttatggtaggacagacaactctaaaagatgcgtcaagcaaagtggccaaacattagaaaacatgttccgacaat 46940804  T
Q  194 caacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||||| |||||||||||||||||||||||||||||    
T  46940805 caacatgcttttataccatttgtttttgacacttttg 46940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 7901094 - 7900887
Alignment:
Q  31 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 129  Q
    ||||||||||||| | ||| ||| ||||||| ||  ||| ||| ||||||||  |  ||||||||||  ||||||||||||||||| |||||||||||||    
T  7901094 atgttatggtgtatagatgtgtaggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggattaggggttgggtcttttacggtagg 7900995  T
Q  130 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 229  Q
     | || | ||||||||  ||| |||| |||| | ||| ||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||     
T  7900994 acggatatccctaaaaactgcgtcaagcaaaatagccgaacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttc 7900895  T
Q  230 ggtttcct 237  Q
    || |||||    
T  7900894 ggcttcct 7900887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 53785965 - 53785738
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| |||| || ||||| |||||| ||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||||||||||     
T  53785965 atcaacactcaggcatgcggatgttttggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccactagtgggattaggt 53785866  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    || ||| ||||||| |||||  || ||||||| ||||  || ||||  || ||||||||||| |||||||| |||||||||| |||||||| ||||||||    
T  53785865 gtcgggccttttaccgtaggataggcagcccttaaagccgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttatac 53785766  T
Q  210 catttgtttttgacacttttggtttcct 237  Q
    |||||| |||||||||||| ||||||||    
T  53785765 catttgcttttgacactttcggtttcct 53785738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 39583169 - 39583307
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||||| |||| ||| | |||| ||||||  || |||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||| ||||||    
T  39583169 tgggattaagggtcgggccatttatggtaggataggcagccctaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaaca 39583268  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || ||||||| |||||||||| |||||||| ||||||||    
T  39583269 tgcttttatatcatttgttttcgacactttcggtttcct 39583307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 24 - 237
Target Start/End: Complemental strand, 49018206 - 49017992
Alignment:
Q  24 catgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggctttta 122  Q
    |||||||||||||||||||||  || |||| ||||||| ||  ||| |||| |||||||  |  ||||||||||  ||| |||||| || | | ||||||    
T  49018206 catgcagatgttatggtgtacggattggtacgaggaaaacatgcatgtgtaaacttgactggagtttcaccacttgtggaattaggtgtcgagcctttta 49018107  T
Q  123 cggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 222  Q
    ||||||| ||  || |||| |||||| | | |||||||||| |||||||||||||||  |||||| ||| |||||||||||||||||||||| ||||| |    
T  49018106 cggtaggacaagcaaccctgaaagttacgtaaaacaaagtgaccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccatttttttttta 49018007  T
Q  223 cacttttggtttcct 237  Q
    |||||| ||||||||    
T  49018006 cactttcggtttcct 49017992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 37132971 - 37133075
Alignment:
Q  131 cagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||||||||||||||| | | |||| ||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| |    
T  37132971 cagacagccctaaaagctacgtcaagcaaagtggttaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgttttttacactttcg 37133070  T
Q  231 gtttc 235  Q
    |||||    
T  37133071 gtttc 37133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 52741439 - 52741590
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaa-gttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    ||||||||||  |||||||||  || ||  ||||||  ||||| ||| ||||||||||| | ||  ||||||||| || |||||||||||||||| ||||    
T  52741439 tttcaccacttgtgggattagatgtaggaccttttattgtaggacaggcagccctaaaaagctgagtcaaacaaattgaccaaacatgagaaagcgtgtt 52741538  T
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  52741539 ctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcct 52741590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 26772911 - 26772787
Alignment:
Q  113 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 212  Q
    ||||| ||||| ||||| ||  || ||||||||||||  |||| |||||||||||||||| ||||| | |||||||||| |||||||| |||||||||||    
T  26772911 ggggcatttacagtaggacatgcatccctaaaagttgtgtcaagcaaagtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccat 26772812  T
Q  213 ttgtttttgacacttttggtttcct 237  Q
    ||| ||||||||||||||| |||||    
T  26772811 ttgcttttgacacttttggcttcct 26772787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 4473224 - 4473090
Alignment:
Q  103 attaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtt 202  Q
    ||||| |||||||| |||||||||||| |||| |||| ||||| |||| |||| ||||||| | |||||||| ||||| |||||| ||  |||| |||||    
T  4473224 attagtggttggggtttttacggtaggacagagagccttaaaaattgcgtcaagcaaagtgtcaaaacatgaaaaagcgtgttctaaccatcaatatgtt 4473125  T
Q  203 tttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| |||||||||||||||||| || |||||    
T  4473124 tttatactatttgtttttgacactttcggcttcct 4473090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 13582705 - 13582539
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    |||||||||||||    ||||| ||||  |||||||||| ||  || ||||||| ||||| ||  |||||||||||| ||| |||| |||||||  ||||    
T  13582705 tgtagacttgaccgaggtttcaacacttgtgggattaggtgtcaggccttttaccgtaggacaagcagccctaaaagctgcgtcaatcaaagtgatcaaa 13582606  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||| ||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||    
T  13582605 cataagaaagtgtgttctgacaatcaacgtgtttttataccatttgttttt-acacttttgatttcct 13582539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 37992511 - 37992384
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||| |||||||| |||||| ||| | |  |||||||||||| || | ||||||  ||||||  |||||||||||| ||||||||||| ||||||||||    
T  37992511 tttcatcactcatgagattagaggtcgagatttttacggtaggacatatagccctgcaagttgtgtcaaacaaagtgaccaaacatgaggaagcatgttc 37992412  T
Q  187 tgacagtcaacatgtttttataccattt 214  Q
    ||||| |||||||| ||||||| |||||    
T  37992411 tgacaatcaacatgattttatatcattt 37992384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 5338796 - 5338672
Alignment:
Q  116 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt---ctgacagtcaacatgtttttataccat 212  Q
    |||||||||||||| |||| |||||||| |||||| ||||||||| | ||||||||||||||||   |||    |||||||||||||| |||||||| ||    
T  5338796 gcttttacggtaggacagaaagccctaagagttgcgtcaaacaaaattgccaaacatgagaaagtgcgttgcgttgacagtcaacatgcttttatacaat 5338697  T
Q  213 ttgtttttgacacttttggtttcct 237  Q
    ||| |||||||||||| || |||||    
T  5338696 ttgcttttgacactttcggcttcct 5338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 38670887 - 38670952
Alignment:
Q  166 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 231  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  38670887 caaacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttgg 38670952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 38146223 - 38146092
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    ||||||||||||| || ||||| | |||||| ||  ||||||||||||  ||||||| |||||||| |||||  |||| | | |||| ||||| ||||||    
T  38146223 tgggattaggggtcggagctttgagggtaggacatgcagccctaaaagcggcatcaatcaaagtggtcaaacgcgagacaacgtgttttgacaatcaaca 38146124  T
Q  199 tgtttttataccatttgtttttgacacttttg 230  Q
    ||||||||||||||||   |||||||||||||    
T  38146123 tgtttttataccatttacatttgacacttttg 38146092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 32546901 - 32546824
Alignment:
Q  160 agtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||  |||||||||||||| ||||||||||||  |||||||    
T  32546901 agtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacactttcagtttcct 32546824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 3443270 - 3443390
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    |||||||| |||| |||| || |||||||||||| |||| |||| ||||||||||||| ||||  | |||| ||| |||||||| |||||||||||||      
T  3443270 cttttacgataggacagagagtcctaaaagttgcgtcaagcaaaatggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattttc 3443369  T
Q  217 ttttgacacttttggtttcct 237  Q
    | ||||||||||  |||||||    
T  3443370 tgttgacactttcagtttcct 3443390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 38978757 - 38978877
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    |||||||||||||  | ||| ||||||||||||  |||| |||| |||  | ||||| |||| | | || ||||| |||| |||||||||||| ||||||    
T  38978757 cttttacggtaggaaatacaaccctaaaagttgtgtcaagcaaattggttagacatgtgaaaacgtattttgacaatcaatatgtttttatactatttgt 38978856  T
Q  217 ttttgacacttttggtttcct 237  Q
    |||||||||||||||||||||    
T  38978857 ttttgacacttttggtttcct 38978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 7502010 - 7502090
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatg-tttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||| ||||||||||||||| |||||  ||| |||||||| ||||||||||||||  |||||||| ||||||||||||    
T  7502010 aaagtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttcct 7502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 54508367 - 54508455
Alignment:
Q  143 aaagttgcatcaaacaaagtggccaaacatgagaaag-catgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||||||| ||||||||| |||| ||||||||||||  | |||||||||| | |||||||||||||| |||||| |||||||| |||||    
T  54508367 aaagttgcgtcaaacaaaatggctaaacatgagaaaaacttgttctgacaattaacatgtttttatatcatttgcttttgacatttttg 54508455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 51234716 - 51234654
Alignment:
Q  166 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||||||| |||||||||| |||||  ||||||| ||||||||||||| |||||||||||||    
T  51234716 caaacatgaaaaagcatgttatgacaaccaacatgcttttataccatttatttttgacacttt 51234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 43123268 - 43123197
Alignment:
Q  143 aaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 214  Q
    ||||| ||||||| ||||||| | |||||||| |||| ||||||||||| |||||||||| |||||| ||||    
T  43123268 aaagtcgcatcaagcaaagtgtctaaacatgataaaggatgttctgacaatcaacatgttgttatactattt 43123197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 52411903 - 52411960
Alignment:
Q  171 atgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    |||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacacttt 52411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 7502109 - 7502153
Alignment:
Q  235 ccttctacaaagttcaaagggtcatgcacaacaatgtcataactc 279  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  7502109 ccttctacagagtttaaagggtcatgcacaacaatgtcatgactc 7502153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 29862048 - 29862003
Alignment:
Q  16 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa 61  Q
    ||||||| |||||||||||||||||||||  ||||||| |||||||    
T  29862048 cacttaggcatgcagatgttatggtgtacggatgggtaggaggaaa 29862003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 35484691 - 35484763
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||||| |||||||||||||  ||||||  ||| ||||||||||||| ||| |||||  |||||||| ||||    
T  35484691 aaagtggtcaaacatgagaaaatatgttccaacaatcaacatgtttttgtactatttgcatttgacacgtttg 35484763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 6529 - 6363
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  |  ||||||||||  ||||||||||| | ||  ||||||| ||||| |||||||||||||||||||| ||||  ||||||||||||    
T  6529 tgtagacttgactggggtttcaccacttgtgggattaggg-tcggaccttttaccgtaggacagacagccctaaaagttgcgtcaagtaaagtggccaaa 6431  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||| |||||||||| |||||||| || ||||||||||| ||||||||||||  |||||||    
T  6430 catgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcct 6363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 33428 - 33279
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    |||||||||| ||||||||||| || ||| ||||||||||||| ||| || || |||| || ||||||| ||||||||| |||||||||||||| |||||    
T  33428 tttcaccacttatgggattaggtgtcgggccttttacggtaggacaggcaaccttaaa-gtggcatcaagcaaagtggctaaacatgagaaagcgtgttc 33330  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||| ||||||||||||||||||||||  |||||||| ||| ||||||||    
T  33329 tgacaatcaacatgtttttataccatttacttttgacattttcggtttcct 33279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 23484802 - 23485006
Alignment:
Q  24 catgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggctttta 122  Q
    |||||| |||||||| |||||  ||||||| ||||||| ||  ||| |||||||||||   |  ||||||||||  |||||||| | || ||| |||| |    
T  23484802 catgcatatgttatgatgtacggatgggtaggaggaaaacatgcatgtgtagacttgattggggtttcaccacttgtgggattaagtgtcgggcctttaa 23484901  T
Q  123 cggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 222  Q
    |||| || ||   ||||||||||| | | |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23484902 cggtgggacaactagccctaaaagctacgtcaaacaaagtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttgtttttga 23485001  T
Q  223 cactt 227  Q
    |||||    
T  23485002 cactt 23485006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 237
Target Start/End: Original strand, 41867778 - 41867986
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    |||||||||||||||| ||||||| | ||||| ||  | | ||||||||||||    ||||||| |||  |||||||||| || ||  ||||||  ||||    
T  41867778 gatgttatggtgtacagatgggtaggtggaaaacatgcttgtgtagacttgactgagatttcacgacttgtgggattaggtgtcggaccttttatcgtag 41867877  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | ||| ||||| |||||| ||| |||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  41867878 gacaggcagccttaaaagctgcgtcaagcaaagtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacacttt 41867977  T
Q  229 tggtttcct 237  Q
     || |||||    
T  41867978 cgggttcct 41867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 2888753 - 2888545
Alignment:
Q  26 tgcagatgttatggtgtacaaatgggtaagagg-aaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 124  Q
    ||||||||||||||| |||| |||||||||||| |||||  ||| ||| ||||| ||  | ||||| ||||| || ||||||||||| ||     ||| |    
T  2888753 tgcagatgttatggtatacatatgggtaagaggtaaacatgcatgtgtggacttaactggaatttcgccacttataggattaggggtcgga----ttatg 2888658  T
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    |||| ||| ||| ||||||||||||| || | |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||| |||| |||||    
T  2888657 gtagtgcaaacaaccctaaaagttgcgtctagcaaagtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgaca 2888558  T
Q  225 cttttggtttcct 237  Q
    ||||||| |||||    
T  2888557 cttttggcttcct 2888545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 5532598 - 5532457
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||  |||||||||||| ||| |||| |||||||| ||||||||||||| | ||||     
T  5532598 tttcaccactcataggattaggggtcggggattttacggtaggacatgcagccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttg 5532499  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||    
T  5532498 tgacaatcaacatgcttttatactatttacttttgacacttt 5532457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 4413024 - 4413144
Alignment:
Q  117 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 216  Q
    ||||||| ||||| ||| || ||||||||| ||  |||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||     
T  4413024 cttttaccgtaggacaggcaaccctaaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgc 4413123  T
Q  217 ttttgacacttttggtttcct 237  Q
    |||||||||||| ||||||||    
T  4413124 ttttgacactttcggtttcct 4413144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 230
Target Start/End: Original strand, 9685326 - 9685486
Alignment:
Q  70 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 169  Q
    ||||||||||||  |  ||||||||||  |||||||||| ||  |  ||||||| |||||  || |||||||||||   || |||| |||||||||||||    
T  9685326 tgtagacttgactggggtttcaccacttgtgggattaggtgtcagaccttttaccgtaggataggcagccctaaaatccgcgtcaagcaaagtggccaaa 9685425  T
Q  170 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    ||||| ||||| |||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  9685426 catgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttg 9685486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 234
Target Start/End: Original strand, 19161634 - 19161858
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| |||| || ||||| ||||||||| ||||   ||||||| ||||||| ||  ||| |||||||||||  ||  ||||||||||  || ||||||      
T  19161634 atcaacactcaggcatgcggatgttatgatgtaaggatgggtaggaggaaaacatgcatgtgtagacttgaatagggtttcaccacttgtgagattagat 19161733  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    ||  || |||||| |||||| || ||| ||||||||  ||| ||||  ||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  19161734 gtcaggccttttatggtaggacatacatccctaaaatctgcgtcaagaaaagtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttatac 19161833  T
Q  210 catttgtttttgacacttttggttt 234  Q
    |||||| |||||||||||| |||||    
T  19161834 catttgcttttgacactttcggttt 19161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 28225167 - 28225029
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||| ||||| ||| |||||||||||||||| || ||| |  |||||| ||| |||| ||||||| ||||| |||||||||| | |||||||| ||||||    
T  28225167 tgggcttaggagttagggcttttacggtaggacaaacaactttaaaagctgcgtcaagcaaagtgaccaaatatgagaaagcgtattctgacaatcaaca 28225068  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || |||||||||||||| |||||||||||| || |||||    
T  28225067 tgcttttataccatttgcttttgacactttcggcttcct 28225029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 44686598 - 44686490
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||  |||| ||| |||||||||||||||||||| |||||    
T  44686598 tttcaccacttgtgggtttaggggtcggggcttttacgataggacagacagtcctaaaagctg-gtcaagcaatgtggccaaacatgagaaagcgtgttc 44686500  T
Q  187 tgacagtcaa 196  Q
    ||||| ||||    
T  44686499 tgacaatcaa 44686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 17344894 - 17344667
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| |||| || ||||| |||||||||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  |||||| |||  ||||||||||     
T  17344894 atcaacactcaggcatgcggatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcacaacttgtgggattaggt 17344795  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    ||  |  ||||||| |||||  || ||| ||| |||| ||| ||||  || ||||||||||| |||||| | |||| | ||| |||||||| ||||||||    
T  17344794 gtcagaccttttaccgtaggaaagccagtccttaaagctgcgtcaagtaaggtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttatac 17344695  T
Q  210 catttgtttttgacacttttggtttcct 237  Q
    |||||| ||||||||||||  |||||||    
T  17344694 catttgcttttgacactttcagtttcct 17344667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 1296031 - 1296111
Alignment:
Q  140 ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 220  Q
    ||||||| ||| ||||||||| |||||||||||||||||  ||||||||||| | |||||||||||||||| ||| |||||    
T  1296031 ctaaaagctgcgtcaaacaaaatggccaaacatgagaaaatatgttctgacaataaacatgtttttatacctttttttttt 1296111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 13147096 - 13147175
Alignment:
Q  158 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgt---ttttataccatttgtttttgacacttttggttt 234  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||| |   |||||||||||||| ||||||||||||||||||    
T  13147096 aaagtggtcaaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttt 13147175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 27502540 - 27502400
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||  |||| ||||||||  | ||||||||| |||| || | | ||||||||| ||| |||| |||||||| ||||||||||||| | |||||    
T  27502540 tttcaccacttgtgggtttaggggtcagagcttttacgataggaca-ataaccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttc 27502442  T
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
     ||||  ||||||| |||||||| |||  |||||||||||||    
T  27502441 cgacaaacaacatgcttttatacaattgctttttgacacttt 27502400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 34814812 - 34814893
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 233  Q
    ||||| ||||||  ||||||||||||||| |||||||||| |||| ||| |||||||||||||| ||| |||||||| ||||    
T  34814812 tcaaataaagtgatcaaacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctttcgacactttcggtt 34814893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 18744956 - 18745019
Alignment:
Q  161 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 224  Q
    ||||||||||| |||||||| |||||||||| |||||||  |||||||||||||| ||||||||    
T  18744956 gtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgcttttgaca 18745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 3825894 - 3825764
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt-ctgacagtcaac 197  Q
    |||||||||||||  || ||||||||||| | |||| ||||||||||| ||| |||| |||||||| ||||||||| ||||  | || |||||| || ||    
T  3825894 tgggattaggggtcaggacttttacggtatgacagagagccctaaaagctgcgtcaagcaaagtggtcaaacatgaaaaagttttttcctgacaatctac 3825795  T
Q  198 atgtttttataccatttgtttttgacacttt 228  Q
    ||||||||||  |||||| ||  ||||||||    
T  3825794 atgtttttatttcatttgcttcagacacttt 3825764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 33612555 - 33612625
Alignment:
Q  167 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||||| | |||| ||||| |||||||| |||||||| |||||| |||||||||||||| |||||    
T  33612555 aaacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcct 33612625  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 2886638 - 2886692
Alignment:
Q  182 tgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 236  Q
    |||||||||| |||||||||||||||| ||||||||||||| | ||| |||||||    
T  2886638 tgttctgacaatcaacatgtttttatatcatttgtttttgatattttcggtttcc 2886692  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 5679392 - 5679314
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 230  Q
    |||| |||||||||||||||||||||| ||||||  || | |||||||  ||| ||||||||| | |||||||||||||    
T  5679392 tcaagcaaagtggccaaacatgagaaaacatgttaagataatcaacatcctttcataccatttatgtttgacacttttg 5679314  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 20142753 - 20142800
Alignment:
Q  187 tgacagtcaacatgtttttataccatttgtttttgacacttttggttt 234  Q
    ||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  20142753 tgacaatcaacatgcttttataccattttcttttgacacttttggttt 20142800  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 9675023 - 9674946
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtgg 164  Q
    ||||||||||||||||||||||| |  |  |||||| |||||| || | ||||||||||  ||| |||||||||||||    
T  9675023 tttcaccactcatgggattagggatcagaccttttatggtaggacaaatagccctaaaatatgcgtcaaacaaagtgg 9674946  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 44720427 - 44720374
Alignment:
Q  162 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 215  Q
    ||||||||||||| ||| | |||| ||||| |||||||||||||||||| ||||    
T  44720427 tggccaaacatgaaaaaacgtgttatgacaatcaacatgtttttataccgtttg 44720374  T

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Target: scaffold0224 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 86 - 236
Target Start/End: Original strand, 18292 - 18441
Alignment:
Q  86 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 185  Q
    ||||||| |||| |||||||| |||| || ||||||| | |||| || ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  18292 atttcactactcgtgggattacgggtcggagcttttatgataggacaaacaaccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgtt 18390  T
Q  186 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 236  Q
    || ||| |||||||||||||||  ||| || |||||||||||||| |||||    
T  18391 ctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttcc 18441  T

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Target: scaffold0186 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 10543 - 10389
Alignment:
Q  87 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 186  Q
    ||||||||||| ||||||||||||||||||||||||| || || ||  |||||||||||||||| ||||  ||| ||||||||||||| || || |||||    
T  10543 tttcaccactcgtgggattaggggttggggcttttacagttggacaagcagccctaaaagttgcgtcaagtaaaatggccaaacatgataatgcgtgttc 10444  T
Q  187 tga----cagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||    || |||||||| |||||||||||||| ||||||||||| ||| |||||    
T  10443 tgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcct 10389  T

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Target: scaffold1768 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 54 - 259
Alignment:
Q  30 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 128  Q
    ||||||||| |||||  ||||||| ||||||| ||  ||| | ||||||||||  |  ||||||||||  |||||||| | || ||| ||||||| ||||    
T  54 gatgttatgatgtacggatgggtaggaggaaaacatgcatgtatagacttgactggggtttcaccacttgtgggattaagtgtcgggccttttactgtag 153  T
Q  129 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    | ||| |||||||||||  ||| |||| |||||||||||||||||||| ||   ||| ||||  |||||||| ||||||||||||||| |||||||||||    
T  154 gacaggcagccctaaaaactgcgtcaagcaaagtggccaaacatgagacagtgggttatgaccatcaacatgcttttataccatttgtgtttgacacttt 253  T
Q  229 tggttt 234  Q
    ||||||    
T  254 tggttt 259  T

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Target: scaffold0110 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 47390 - 47617
Alignment:
Q  11 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacact-catttgtagacttgaccagtatttcaccactcatgggattaggg 109  Q
    |||| |||||||  ||||| ||||||||||||||||||| ||| ||| ||| | | ||  ||| |||||||   |  ||||||||||  |||||||||||    
T  47390 atcaacacttagggatgcaaatgttatggtgtacaaatgagtatgagaaaaaaatgcaagtgtggacttgattggggtttcaccacttgtgggattaggg 47489  T
Q  110 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
     ||| | ||||||||||||| || | |  |||||||||||| ||||  ||| |||||||||||||||||   |||||||||||| ||||| |||||||||    
T  47490 attgagacttttacggtaggacaaataaacctaaaagttgcgtcaagtaaaatggccaaacatgagaaaatgtgttctgacagttaacatatttttatac 47589  T
Q  210 catttgtttttgacacttttggtttcct 237  Q
    |||||| |||| ||||||| | ||||||    
T  47590 catttgcttttaacactttcgatttcct 47617  T

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Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 49542 - 49449
Alignment:
Q  135 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 228  Q
    |||||||||||||||||||||||||||||| ||||  ||||||| | |||||||||| ||||| || |||||||||||||| ||||||||||||    
T  49542 cagccctaaaagttgcatcaaacaaagtggtcaaatgtgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacacttt 49449  T

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Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 103272 - 103135
Alignment:
Q  99 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 198  Q
    |||||| ||| || ||| ||||||| ||||| ||| ||||||| |||| ||| ||||  ||  |||||||||| |||||||| ||| |||||| ||||||    
T  103272 tgggataaggtgtcgggccttttaccgtaggacaggcagccctcaaagctgcgtcaagtaagatggccaaacacgagaaagcgtgt-ctgacaatcaaca 103174  T
Q  199 tgtttttataccatttgtttttgacacttttggtttcct 237  Q
    || |||||||||||||| |||||||||||| ||||||||    
T  103173 tgcttttataccatttgcttttgacactttcggtttcct 103135  T

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Target: scaffold0493 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 8525 - 8594
Alignment:
Q  168 aacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttcct 8594  T

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Target: scaffold0119 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 16275 - 16191
Alignment:
Q  125 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 209  Q
    ||||| |||||| | ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||| | |||||||||||||||    
T  16275 gtaggacagacaacgctaaaagctgcgtcaaacaaaatggccaaacatgagaaaacatgttctgacaataaacatgtttttatac 16191  T

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Target: scaffold0470 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 7727 - 7631
Alignment:
Q  141 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 237  Q
    |||||||||| ||||| | ||| |  |||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||||||||||||  |||||||    
T  7727 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcct 7631  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 37444 - 37391
Alignment:
Q  152 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgttttt 205  Q
    ||||||||| ||  ||||||||||||||||| |||||||| |||||||||||||    
T  37444 tcaaacaaaatgatcaaacatgagaaagcatattctgacaatcaacatgttttt 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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