View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20962_low_29 (Length: 202)
Name: NF20962_low_29
Description: NF20962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20962_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 188
Target Start/End: Complemental strand, 3964555 - 3964384
Alignment:
| Q |
17 |
cacaaaagggtgctcatttattggttgccaacttgagggtaacagtgataggttgcaaactatatagagcactagctatagcaccaatgtttatgaacag |
116 |
Q |
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| T |
3964555 |
cacaaaagggtgctcatttattggttgccaacttgagggtaacagtgataggttgcaaactatatagagcactagctatagcgccaatgtttatgaacag |
3964456 |
T |
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| Q |
117 |
tacaagaagacctagcaaagaccgtctcaaagagcactaacaagtaggctaacctaagttggcttgcatcat |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3964455 |
tacaagaagacctagcaaagaccgtctcaaagagcactaacaagtaggctaacctaagttggcttgcatcat |
3964384 |
T |
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