View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20962_low_3 (Length: 694)

Name: NF20962_low_3
Description: NF20962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20962_low_3
NF20962_low_3
[»] chr5 (77 HSPs)
chr5 (425-660)||(13634716-13634951)
chr5 (425-660)||(26414898-26415134)
chr5 (425-619)||(10072692-10072886)
chr5 (425-660)||(7544141-7544376)
chr5 (425-660)||(16938484-16938719)
chr5 (425-622)||(4373608-4373805)
chr5 (425-660)||(10476031-10476268)
chr5 (464-660)||(9798616-9798812)
chr5 (492-660)||(8502839-8503007)
chr5 (492-612)||(9856952-9857072)
chr5 (425-660)||(28279480-28279716)
chr5 (425-619)||(2550397-2550591)
chr5 (505-639)||(36392176-36392309)
chr5 (423-659)||(36363035-36363271)
chr5 (425-557)||(40815302-40815433)
chr5 (502-636)||(20513473-20513611)
chr5 (492-617)||(42681525-42681652)
chr5 (495-618)||(17024270-17024393)
chr5 (492-619)||(37606967-37607093)
chr5 (501-619)||(37779184-37779302)
chr5 (517-613)||(20146917-20147013)
chr5 (425-591)||(11756883-11757048)
chr5 (425-559)||(14681475-14681608)
chr5 (511-660)||(37551498-37551645)
chr5 (511-660)||(37654328-37654475)
chr5 (97-181)||(4959367-4959451)
chr5 (565-660)||(1657958-1658053)
chr5 (82-156)||(32050421-32050495)
chr5 (511-622)||(43497-43610)
chr5 (425-533)||(22022852-22022963)
chr5 (548-660)||(14245092-14245204)
chr5 (425-660)||(10204581-10204816)
chr5 (425-660)||(40305674-40305904)
chr5 (550-660)||(10650544-10650654)
chr5 (487-565)||(33424901-33424979)
chr5 (79-169)||(42224580-42224670)
chr5 (512-613)||(27110120-27110220)
chr5 (87-156)||(40971564-40971633)
chr5 (87-156)||(42224702-42224771)
chr5 (425-485)||(14245093-14245153)
chr5 (511-619)||(29002251-29002359)
chr5 (528-622)||(13839770-13839864)
chr5 (96-181)||(24915144-24915227)
chr5 (96-181)||(24990975-24991058)
chr5 (428-589)||(21580955-21581116)
chr5 (428-660)||(33744197-33744429)
chr5 (87-155)||(26072218-26072286)
chr5 (96-180)||(40971459-40971543)
chr5 (523-622)||(32727819-32727918)
chr5 (82-156)||(4959273-4959347)
chr5 (493-555)||(39966061-39966123)
chr5 (96-157)||(6263994-6264055)
chr5 (427-533)||(10650434-10650542)
chr5 (575-660)||(34980814-34980899)
chr5 (425-558)||(34980815-34980948)
chr5 (90-181)||(13456167-13456256)
chr5 (97-181)||(34818275-34818359)
chr5 (432-615)||(10043264-10043447)
chr5 (87-153)||(6263883-6263949)
chr5 (425-579)||(8551503-8551657)
chr5 (427-485)||(10043431-10043489)
chr5 (87-169)||(17568699-17568781)
chr5 (536-589)||(22023483-22023537)
chr5 (598-660)||(26414897-26414959)
chr5 (425-479)||(30006625-30006679)
chr5 (511-565)||(35244004-35244058)
chr5 (87-181)||(8912599-8912695)
chr5 (599-660)||(13634715-13634776)
chr5 (425-485)||(1657992-1658052)
chr5 (510-558)||(1977622-1977670)
chr5 (601-661)||(2550533-2550593)
chr5 (427-483)||(6382508-6382564)
chr5 (43-75)||(10977203-10977235)
chr5 (466-522)||(11419303-11419359)
chr5 (425-485)||(13634890-13634950)
chr5 (576-660)||(14245202-14245286)
chr5 (425-485)||(33744198-33744258)
[»] chr3 (83 HSPs)
chr3 (425-660)||(24560222-24560457)
chr3 (466-610)||(2387814-2387958)
chr3 (425-660)||(41110325-41110560)
chr3 (426-619)||(21773788-21773981)
chr3 (495-660)||(36568908-36569072)
chr3 (426-619)||(220442-220635)
chr3 (425-643)||(25654991-25655211)
chr3 (469-619)||(37807129-37807279)
chr3 (425-571)||(14897981-14898127)
chr3 (492-660)||(18654604-18654772)
chr3 (466-666)||(40463869-40464069)
chr3 (425-589)||(43005814-43005978)
chr3 (496-660)||(41039954-41040118)
chr3 (494-660)||(16275709-16275875)
chr3 (466-645)||(46556189-46556369)
chr3 (466-619)||(651777-651929)
chr3 (425-619)||(12790378-12790572)
chr3 (436-619)||(30200133-30200319)
chr3 (466-619)||(37102194-37102347)
chr3 (425-551)||(46204891-46205017)
chr3 (425-613)||(9312522-9312708)
chr3 (471-658)||(27541937-27542124)
chr3 (493-644)||(52473988-52474139)
chr3 (280-352)||(54751794-54751866)
chr3 (425-564)||(28582609-28582748)
chr3 (466-585)||(52185061-52185181)
chr3 (82-169)||(38928001-38928088)
chr3 (425-660)||(24253726-24253962)
chr3 (425-660)||(17474210-17474445)
chr3 (87-181)||(54140890-54140984)
chr3 (425-542)||(6803323-6803440)
chr3 (493-661)||(10748298-10748468)
chr3 (97-181)||(10769732-10769816)
chr3 (505-660)||(34641077-34641230)
chr3 (81-156)||(37600241-37600316)
chr3 (493-568)||(51819221-51819296)
chr3 (426-564)||(16884071-16884209)
chr3 (425-555)||(54574470-54574595)
chr3 (496-622)||(55327446-55327572)
chr3 (87-156)||(21232633-21232702)
chr3 (96-181)||(24748916-24749001)
chr3 (423-644)||(26135805-26136021)
chr3 (88-156)||(54141004-54141072)
chr3 (425-477)||(55428566-55428618)
chr3 (505-596)||(45663213-45663303)
chr3 (87-181)||(37600127-37600221)
chr3 (90-156)||(46237157-46237223)
chr3 (425-558)||(21090177-21090310)
chr3 (504-660)||(23028005-23028166)
chr3 (501-613)||(48683693-48683806)
chr3 (496-536)||(31684362-31684402)
chr3 (426-558)||(41414084-41414216)
chr3 (87-169)||(29775139-29775219)
chr3 (467-546)||(49815469-49815547)
chr3 (21-75)||(5123249-5123303)
chr3 (516-582)||(13082945-13083010)
chr3 (511-561)||(37237013-37237063)
chr3 (87-156)||(10769836-10769905)
chr3 (426-658)||(10943620-10943852)
chr3 (501-558)||(40858646-40858703)
chr3 (494-555)||(42699721-42699782)
chr3 (496-536)||(31894016-31894056)
chr3 (88-156)||(40715973-40716041)
chr3 (510-558)||(54996786-54996834)
chr3 (426-485)||(27541937-27541996)
chr3 (511-558)||(42772123-42772170)
chr3 (573-667)||(17474359-17474453)
chr3 (504-558)||(44412445-44412499)
chr3 (495-565)||(47989064-47989133)
chr3 (495-565)||(47998351-47998420)
chr3 (495-565)||(48007638-48007707)
chr3 (43-79)||(3209865-3209902)
chr3 (512-565)||(25179986-25180039)
chr3 (87-156)||(28529253-28529322)
chr3 (565-666)||(28581184-28581285)
chr3 (107-156)||(43657107-43657156)
chr3 (501-558)||(46978508-46978565)
chr3 (598-658)||(220575-220635)
chr3 (598-658)||(21773788-21773848)
chr3 (425-485)||(24253901-24253961)
chr3 (599-659)||(25499074-25499134)
chr3 (425-485)||(34641169-34641229)
chr3 (425-485)||(41110326-41110386)
[»] chr4 (75 HSPs)
chr4 (425-645)||(31348340-31348560)
chr4 (425-660)||(54935072-54935309)
chr4 (426-656)||(17938115-17938346)
chr4 (425-660)||(45741895-45742130)
chr4 (425-660)||(27735750-27735985)
chr4 (429-611)||(16400809-16400991)
chr4 (433-650)||(6891373-6891590)
chr4 (425-660)||(54320440-54320674)
chr4 (425-625)||(47433748-47433948)
chr4 (464-635)||(44784036-44784206)
chr4 (425-580)||(46007785-46007940)
chr4 (425-593)||(26166942-26167110)
chr4 (436-660)||(49735472-49735695)
chr4 (464-635)||(28332848-28333019)
chr4 (492-618)||(36151648-36151773)
chr4 (492-660)||(5730834-5731002)
chr4 (425-571)||(1968452-1968598)
chr4 (425-661)||(29798293-29798522)
chr4 (425-579)||(45132586-45132734)
chr4 (425-567)||(37711143-37711290)
chr4 (425-561)||(22920986-22921123)
chr4 (425-561)||(22970676-22970813)
chr4 (492-656)||(35248758-35248922)
chr4 (492-660)||(41174417-41174585)
chr4 (425-659)||(55510174-55510407)
chr4 (425-617)||(55080584-55080776)
chr4 (513-644)||(21694910-21695040)
chr4 (425-559)||(56135754-56135888)
chr4 (97-156)||(42862532-42862591)
chr4 (425-622)||(47846097-47846295)
chr4 (436-660)||(24565350-24565572)
chr4 (425-619)||(34110803-34111003)
chr4 (425-613)||(2247854-2248040)
chr4 (96-180)||(51206133-51206217)
chr4 (492-559)||(2917068-2917135)
chr4 (87-156)||(44832577-44832646)
chr4 (88-156)||(39016777-39016845)
chr4 (425-555)||(17182594-17182724)
chr4 (82-180)||(37315650-37315748)
chr4 (574-660)||(37761469-37761555)
chr4 (87-153)||(42862418-42862484)
chr4 (501-558)||(43961491-43961548)
chr4 (495-558)||(18516577-18516640)
chr4 (428-615)||(22186727-22186914)
chr4 (598-660)||(1968537-1968599)
chr4 (505-603)||(14539357-14539455)
chr4 (87-153)||(47237855-47237921)
chr4 (81-178)||(2187805-2187902)
chr4 (567-660)||(6938394-6938487)
chr4 (96-181)||(13070029-13070114)
chr4 (599-660)||(31348500-31348561)
chr4 (96-153)||(40812046-40812103)
chr4 (516-561)||(41227576-41227621)
chr4 (425-485)||(4437430-4437490)
chr4 (96-156)||(8108965-8109025)
chr4 (596-660)||(46007877-46007941)
chr4 (471-531)||(31719966-31720028)
chr4 (88-154)||(2187926-2187992)
chr4 (280-350)||(21837389-21837459)
chr4 (96-156)||(37315572-37315629)
chr4 (82-156)||(50571859-50571933)
chr4 (505-551)||(54494723-54494769)
chr4 (103-156)||(30867043-30867096)
chr4 (43-76)||(34438584-34438617)
chr4 (501-558)||(34995132-34995189)
chr4 (587-660)||(37711290-37711363)
chr4 (87-156)||(44832463-44832532)
chr4 (505-561)||(6448030-6448086)
chr4 (100-156)||(13069954-13070009)
chr4 (512-548)||(23332650-23332686)
chr4 (512-556)||(33224945-33224989)
chr4 (504-560)||(34108330-34108386)
chr4 (84-156)||(43771123-43771195)
chr4 (425-485)||(49735473-49735533)
chr4 (512-660)||(54576331-54576479)
[»] chr1 (73 HSPs)
chr1 (466-666)||(8529845-8530045)
chr1 (425-660)||(40094937-40095173)
chr1 (425-660)||(30010337-30010572)
chr1 (425-660)||(41498409-41498645)
chr1 (427-660)||(2858936-2859169)
chr1 (425-618)||(51597673-51597866)
chr1 (425-660)||(38509898-38510133)
chr1 (425-660)||(12234015-12234250)
chr1 (425-616)||(32951366-32951557)
chr1 (425-607)||(49946645-49946827)
chr1 (455-619)||(44210952-44211114)
chr1 (471-619)||(6563628-6563775)
chr1 (428-660)||(10391880-10392108)
chr1 (497-607)||(36285631-36285741)
chr1 (425-660)||(35349470-35349701)
chr1 (471-612)||(50744332-50744474)
chr1 (425-660)||(1085493-1085729)
chr1 (499-666)||(7444574-7444741)
chr1 (492-591)||(45585758-45585857)
chr1 (497-593)||(42230615-42230711)
chr1 (526-660)||(20576137-20576269)
chr1 (504-619)||(41676363-41676480)
chr1 (87-181)||(41095606-41095700)
chr1 (96-176)||(32848589-32848669)
chr1 (495-593)||(26940914-26941012)
chr1 (82-156)||(41917990-41918064)
chr1 (87-156)||(11135739-11135808)
chr1 (93-154)||(28109874-28109935)
chr1 (87-181)||(13388334-13388428)
chr1 (96-169)||(11135840-11135913)
chr1 (87-156)||(11430441-11430510)
chr1 (425-562)||(33643273-33643410)
chr1 (96-156)||(41095720-41095780)
chr1 (547-660)||(43552000-43552109)
chr1 (598-660)||(32951496-32951558)
chr1 (87-156)||(32848694-32848763)
chr1 (425-485)||(2858937-2858997)
chr1 (466-660)||(2470734-2470933)
chr1 (82-169)||(11430542-11430628)
chr1 (535-662)||(35512912-35513039)
chr1 (511-617)||(40709339-40709445)
chr1 (82-156)||(44739113-44739187)
chr1 (504-558)||(51303490-51303544)
chr1 (87-156)||(9165302-9165371)
chr1 (598-659)||(43553109-43553170)
chr1 (494-555)||(50079493-50079554)
chr1 (104-156)||(14094112-14094164)
chr1 (549-660)||(28770852-28770961)
chr1 (467-565)||(49832594-49832689)
chr1 (501-656)||(25268345-25268500)
chr1 (495-558)||(27739127-27739189)
chr1 (598-669)||(41498399-41498470)
chr1 (495-558)||(42742416-42742478)
chr1 (511-558)||(51582072-51582119)
chr1 (494-552)||(2506613-2506671)
chr1 (87-169)||(14093998-14094080)
chr1 (504-558)||(35927897-35927951)
chr1 (501-615)||(47071132-47071246)
chr1 (504-617)||(525148-525259)
chr1 (426-479)||(13386925-13386978)
chr1 (501-554)||(25454833-25454885)
chr1 (87-156)||(43851146-43851215)
chr1 (425-485)||(7444483-7444543)
chr1 (87-151)||(28109986-28110050)
chr1 (81-156)||(29418595-29418671)
chr1 (425-485)||(35927991-35928051)
chr1 (43-75)||(36509989-36510021)
chr1 (539-622)||(40964717-40964801)
chr1 (493-545)||(43553049-43553101)
chr1 (81-181)||(43832358-43832458)
chr1 (513-561)||(49065548-49065596)
chr1 (495-555)||(51303685-51303744)
chr1 (501-617)||(52707726-52707842)
[»] scaffold0067 (1 HSPs)
scaffold0067 (425-660)||(39190-39429)
[»] chr7 (84 HSPs)
chr7 (425-619)||(33655153-33655347)
chr7 (425-644)||(1051520-1051737)
chr7 (425-644)||(25887197-25887417)
chr7 (425-660)||(47390860-47391096)
chr7 (493-618)||(24970211-24970336)
chr7 (452-660)||(41496961-41497169)
chr7 (425-660)||(43230241-43230475)
chr7 (490-658)||(4833537-4833705)
chr7 (493-660)||(40196536-40196703)
chr7 (467-617)||(17852918-17853067)
chr7 (425-618)||(34235053-34235242)
chr7 (527-660)||(18231693-18231826)
chr7 (425-613)||(26365772-26365961)
chr7 (425-554)||(39855975-39856104)
chr7 (425-660)||(13770952-13771185)
chr7 (425-571)||(34228411-34228558)
chr7 (492-660)||(45940660-45940828)
chr7 (501-607)||(22163167-22163272)
chr7 (501-607)||(22221875-22221980)
chr7 (455-592)||(37417705-37417842)
chr7 (425-660)||(33519053-33519288)
chr7 (426-660)||(41008188-41008418)
chr7 (425-619)||(35421969-35422163)
chr7 (471-660)||(42306385-42306570)
chr7 (522-659)||(10315735-10315872)
chr7 (510-644)||(32872806-32872935)
chr7 (492-622)||(40572277-40572406)
chr7 (504-618)||(48093977-48094091)
chr7 (425-564)||(31571568-31571709)
chr7 (425-660)||(36267557-36267792)
chr7 (82-169)||(37549619-37549706)
chr7 (87-181)||(13919869-13919963)
chr7 (504-669)||(13425115-13425280)
chr7 (87-156)||(22786151-22786220)
chr7 (512-660)||(28074107-28074255)
chr7 (493-643)||(30891015-30891165)
chr7 (493-580)||(42087068-42087155)
chr7 (504-558)||(18063667-18063721)
chr7 (87-181)||(26703437-26703531)
chr7 (96-181)||(26189992-26190077)
chr7 (495-568)||(48152055-48152127)
chr7 (471-607)||(18795652-18795788)
chr7 (96-155)||(23934021-23934080)
chr7 (87-153)||(19840882-19840948)
chr7 (504-617)||(23116306-23116420)
chr7 (516-565)||(18127341-18127390)
chr7 (99-156)||(19494450-19494507)
chr7 (512-565)||(20393693-20393746)
chr7 (425-542)||(37925846-37925963)
chr7 (511-660)||(48881562-48881711)
chr7 (96-156)||(13919789-13919849)
chr7 (96-156)||(31959968-31960028)
chr7 (470-558)||(38378095-38378183)
chr7 (425-472)||(47230011-47230058)
chr7 (528-670)||(30592247-30592389)
chr7 (87-156)||(45909455-45909525)
chr7 (523-589)||(47229907-47229973)
chr7 (103-156)||(26703551-26703604)
chr7 (425-474)||(41496962-41497011)
chr7 (96-156)||(25428485-25428545)
chr7 (425-546)||(26079923-26080046)
chr7 (425-546)||(26103710-26103833)
chr7 (425-485)||(48881563-48881623)
chr7 (504-555)||(3143564-3143615)
chr7 (511-558)||(19261945-19261992)
chr7 (81-156)||(19422945-19423020)
chr7 (503-565)||(7791802-7791864)
chr7 (598-644)||(13771124-13771170)
chr7 (87-169)||(14759744-14759826)
chr7 (598-660)||(31571648-31571710)
chr7 (598-660)||(39856043-39856105)
chr7 (87-156)||(17354638-17354707)
chr7 (425-490)||(18231760-18231825)
chr7 (505-558)||(21857432-21857485)
chr7 (87-156)||(25428590-25428659)
chr7 (87-156)||(33008104-33008173)
chr7 (455-519)||(10315648-10315712)
chr7 (84-156)||(14795128-14795200)
chr7 (84-156)||(15242120-15242192)
chr7 (549-617)||(19835838-19835906)
chr7 (466-518)||(23029480-23029532)
chr7 (425-461)||(31364247-31364283)
chr7 (96-156)||(44511047-44511107)
chr7 (96-156)||(45909570-45909630)
[»] chr2 (75 HSPs)
chr2 (425-619)||(15224739-15224933)
chr2 (425-660)||(36347545-36347780)
chr2 (426-666)||(31795767-31796002)
chr2 (492-673)||(23748167-23748348)
chr2 (424-656)||(8426887-8427111)
chr2 (425-619)||(39732774-39732967)
chr2 (425-660)||(36046208-36046440)
chr2 (466-608)||(28262499-28262641)
chr2 (425-640)||(36566874-36567091)
chr2 (516-660)||(34209560-34209704)
chr2 (493-619)||(16565850-16565976)
chr2 (519-621)||(42316807-42316909)
chr2 (466-608)||(39354230-39354372)
chr2 (492-619)||(12751886-12752014)
chr2 (493-607)||(37739950-37740063)
chr2 (495-619)||(39821744-39821868)
chr2 (492-660)||(40022442-40022613)
chr2 (427-660)||(9631565-9631800)
chr2 (425-547)||(35736180-35736302)
chr2 (425-613)||(9426990-9427179)
chr2 (492-619)||(19566865-19566993)
chr2 (425-558)||(3094459-3094592)
chr2 (505-602)||(17379897-17379994)
chr2 (425-591)||(12541775-12541937)
chr2 (425-667)||(2241416-2241665)
chr2 (425-554)||(41841687-41841816)
chr2 (425-553)||(41778778-41778906)
chr2 (460-559)||(6721727-6721826)
chr2 (462-561)||(18811371-18811469)
chr2 (504-619)||(7681332-7681443)
chr2 (87-156)||(42182889-42182958)
chr2 (425-558)||(42296409-42296542)
chr2 (88-156)||(1107039-1107107)
chr2 (96-156)||(37228613-37228673)
chr2 (429-555)||(886927-887051)
chr2 (87-156)||(4964784-4964853)
chr2 (87-156)||(28898148-28898217)
chr2 (87-156)||(31395556-31395625)
chr2 (82-169)||(20951601-20951686)
chr2 (532-620)||(27926665-27926753)
chr2 (504-620)||(35325353-35325469)
chr2 (80-176)||(37719827-37719923)
chr2 (425-660)||(45257312-45257547)
chr2 (428-555)||(33265615-33265741)
chr2 (82-156)||(15509028-15509102)
chr2 (82-180)||(37398806-37398904)
chr2 (84-181)||(28898031-28898128)
chr2 (425-558)||(31061364-31061497)
chr2 (509-565)||(20545798-20545854)
chr2 (466-542)||(29525855-29525931)
chr2 (493-585)||(32503232-32503324)
chr2 (96-148)||(37228507-37228559)
chr2 (573-660)||(35736340-35736427)
chr2 (514-644)||(887210-887334)
chr2 (512-562)||(31928146-31928196)
chr2 (598-660)||(36347719-36347781)
chr2 (504-660)||(15085703-15085860)
chr2 (87-156)||(15508914-15508983)
chr2 (96-149)||(27968927-27968980)
chr2 (96-149)||(28091607-28091660)
chr2 (96-149)||(28101839-28101892)
chr2 (591-660)||(31061363-31061432)
chr2 (426-479)||(31061545-31061598)
chr2 (501-558)||(45098250-45098307)
chr2 (97-169)||(42182990-42183062)
chr2 (425-485)||(45257486-45257546)
chr2 (84-156)||(45554564-45554636)
chr2 (81-156)||(1110192-1110267)
chr2 (564-615)||(1583221-1583272)
chr2 (96-139)||(25238284-25238327)
chr2 (428-542)||(2381109-2381223)
chr2 (96-156)||(1110312-1110372)
chr2 (427-546)||(1270395-1270515)
chr2 (43-75)||(9472805-9472837)
chr2 (425-485)||(9631739-9631799)
[»] chr8 (65 HSPs)
chr8 (425-658)||(31543078-31543311)
chr8 (425-656)||(11575415-11575645)
chr8 (466-660)||(41103508-41103704)
chr8 (426-618)||(1281149-1281341)
chr8 (425-619)||(1026894-1027087)
chr8 (425-613)||(9718530-9718718)
chr8 (466-660)||(16652995-16653189)
chr8 (492-620)||(37923122-37923250)
chr8 (492-671)||(36308914-36309094)
chr8 (466-660)||(11785572-11785766)
chr8 (425-661)||(30479720-30479956)
chr8 (425-618)||(11033424-11033616)
chr8 (425-607)||(7503011-7503193)
chr8 (471-660)||(31738474-31738663)
chr8 (429-618)||(13404985-13405178)
chr8 (425-612)||(28083747-28083934)
chr8 (425-607)||(2248457-2248639)
chr8 (433-660)||(3726867-3727086)
chr8 (492-613)||(6315134-6315255)
chr8 (466-660)||(37032425-37032620)
chr8 (428-619)||(30664370-30664560)
chr8 (493-619)||(29358385-29358510)
chr8 (425-580)||(40990268-40990422)
chr8 (425-619)||(7979145-7979339)
chr8 (425-617)||(12022190-12022382)
chr8 (501-619)||(4247563-4247680)
chr8 (512-666)||(16024246-16024399)
chr8 (493-557)||(42650443-42650507)
chr8 (425-660)||(43732684-43732927)
chr8 (467-617)||(24243096-24243244)
chr8 (519-660)||(29690926-29691067)
chr8 (426-580)||(33922531-33922680)
chr8 (537-660)||(34634260-34634383)
chr8 (425-551)||(10028115-10028241)
chr8 (99-176)||(35689574-35689651)
chr8 (97-156)||(35689490-35689549)
chr8 (88-153)||(23142937-23143002)
chr8 (425-669)||(30365135-30365379)
chr8 (504-591)||(35694828-35694915)
chr8 (279-350)||(16911023-16911094)
chr8 (87-156)||(7599533-7599602)
chr8 (495-571)||(27487065-27487141)
chr8 (510-558)||(30581916-30581964)
chr8 (505-565)||(38198148-38198208)
chr8 (96-169)||(1205928-1206001)
chr8 (425-546)||(8671912-8672033)
chr8 (575-660)||(9933244-9933329)
chr8 (575-660)||(30365134-30365219)
chr8 (118-175)||(34303466-34303523)
chr8 (425-485)||(7394640-7394700)
chr8 (425-485)||(8815146-8815206)
chr8 (425-485)||(43732866-43732926)
chr8 (425-619)||(9933245-9933440)
chr8 (436-475)||(11033607-11033646)
chr8 (510-561)||(16838152-16838203)
chr8 (496-578)||(27483636-27483718)
chr8 (88-181)||(28211885-28211977)
chr8 (501-606)||(40633047-40633152)
chr8 (96-156)||(1205836-1205896)
chr8 (598-658)||(1281149-1281209)
chr8 (598-666)||(10028108-10028176)
chr8 (510-558)||(26167846-26167894)
chr8 (84-156)||(28413980-28414052)
chr8 (502-542)||(34633819-34633859)
chr8 (30-77)||(44076261-44076309)
[»] scaffold0096 (1 HSPs)
scaffold0096 (425-617)||(6589-6780)
[»] chr6 (56 HSPs)
chr6 (492-660)||(5585305-5585474)
chr6 (428-656)||(33235959-33236186)
chr6 (425-659)||(19278039-19278276)
chr6 (425-625)||(2892643-2892842)
chr6 (426-618)||(16738042-16738233)
chr6 (425-660)||(30487310-30487544)
chr6 (425-619)||(21606889-21607083)
chr6 (425-617)||(4097559-4097752)
chr6 (425-660)||(14515478-14515711)
chr6 (425-660)||(9719035-9719269)
chr6 (494-660)||(9721142-9721307)
chr6 (425-618)||(30849960-30850151)
chr6 (425-615)||(31849115-31849305)
chr6 (425-660)||(1390324-1390559)
chr6 (493-622)||(34176408-34176537)
chr6 (466-622)||(2892885-2893044)
chr6 (425-660)||(10818234-10818456)
chr6 (493-660)||(1300692-1300860)
chr6 (493-593)||(13583792-13583892)
chr6 (492-579)||(25741479-25741566)
chr6 (492-618)||(1395707-1395834)
chr6 (434-533)||(6034203-6034302)
chr6 (425-559)||(12811086-12811219)
chr6 (82-181)||(10060948-10061047)
chr6 (248-350)||(13084825-13084927)
chr6 (425-660)||(33041475-33041692)
chr6 (492-612)||(10348850-10348971)
chr6 (80-156)||(19090326-19090402)
chr6 (492-579)||(25747405-25747493)
chr6 (425-622)||(31798923-31799123)
chr6 (425-542)||(2893635-2893752)
chr6 (512-561)||(32926737-32926786)
chr6 (535-619)||(2900025-2900109)
chr6 (280-352)||(5310448-5310520)
chr6 (501-565)||(5526843-5526906)
chr6 (494-660)||(26318379-26318545)
chr6 (87-169)||(19090212-19090294)
chr6 (87-156)||(6531409-6531478)
chr6 (83-181)||(35128720-35128814)
chr6 (509-644)||(665860-665996)
chr6 (498-618)||(25468445-25468565)
chr6 (425-485)||(26318484-26318544)
chr6 (494-561)||(14548709-14548776)
chr6 (427-485)||(9051541-9051599)
chr6 (87-156)||(373399-373468)
chr6 (511-660)||(4097239-4097388)
chr6 (425-558)||(15323230-15323363)
chr6 (425-558)||(15353369-15353501)
chr6 (425-485)||(9719036-9719096)
chr6 (96-156)||(35128834-35128894)
chr6 (495-546)||(16509356-16509406)
chr6 (510-561)||(17155446-17155497)
chr6 (97-156)||(19737546-19737605)
chr6 (565-615)||(7775996-7776046)
chr6 (87-181)||(19737432-19737526)
chr6 (512-561)||(32922437-32922486)
[»] scaffold0262 (1 HSPs)
scaffold0262 (466-658)||(16302-16494)
[»] scaffold0171 (1 HSPs)
scaffold0171 (434-643)||(15964-16173)
[»] scaffold0341 (1 HSPs)
scaffold0341 (471-619)||(18821-18968)
[»] scaffold0026 (3 HSPs)
scaffold0026 (425-619)||(1177-1371)
scaffold0026 (598-660)||(1176-1238)
scaffold0026 (426-484)||(1403-1461)
[»] scaffold0294 (1 HSPs)
scaffold0294 (496-616)||(15339-15458)
[»] scaffold0198 (2 HSPs)
scaffold0198 (576-660)||(3151-3235)
scaffold0198 (425-485)||(3152-3212)
[»] scaffold0007 (1 HSPs)
scaffold0007 (510-660)||(242306-242456)
[»] scaffold0006 (1 HSPs)
scaffold0006 (505-565)||(81510-81570)
[»] scaffold0783 (1 HSPs)
scaffold0783 (505-565)||(6009-6069)
[»] scaffold0018 (1 HSPs)
scaffold0018 (493-565)||(69306-69378)
[»] scaffold0054 (1 HSPs)
scaffold0054 (96-174)||(30919-30997)
[»] scaffold0004 (1 HSPs)
scaffold0004 (519-561)||(100651-100693)
[»] scaffold0034 (1 HSPs)
scaffold0034 (43-79)||(109644-109681)
[»] scaffold0119 (1 HSPs)
scaffold0119 (427-546)||(30722-30842)
[»] scaffold0012 (1 HSPs)
scaffold0012 (425-485)||(184786-184846)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 3e-68; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 13634716 - 13634951
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||||| ||    
T  13634716 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgt 13634815  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||| | || |    
T  13634816 gtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagtaacccctcc 13634915  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  || |||||||||||    
T  13634916 cctcccttcccctcctaaaccctcaatccaaacaca 13634951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 26414898 - 26415134
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||| |||||||| || | |||||||||| ||| ||||| ||   |||||| |||||||||| ||||||| |||||||    
T  26414898 gtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagt 26414997  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||||||| ||| |||| ||||||||||||  | || ||||||| |||||||||||||| |    
T  26414998 gtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaagtaaactctcc 26415097  T
Q  625 catccttt-cccctcctaaactttccatccaaacaca 660  Q
    | |||||| |||||| |||||  ||||||||||||||    
T  26415098 cctcctttccccctcataaaccctccatccaaacaca 26415134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 10072886 - 10072692
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||| ||||| |||||| |||| ||| |||||||| |||||||||||||||| ||||| ||   |  |||||||||||||| |||||||||||||||    
T  10072886 gtgtttgaattgatggtttaagagggaaaaggaggagaagatttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagt 10072787  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
     |||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||  || ||||||||| | |||||||||||    
T  10072786 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaac 10072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 7544141 - 7544376
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||| |  |||||||| || |  | | ||||||||| ||||| ||   ||||||||||||||||| |||||||||| ||||    
T  7544141 gtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 7544240  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||| |||||| |||||| |||  |||||| |||||||| |||||||||||| || |||||||||| |||||  |||| || |    
T  7544241 gtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaaccaaaccctcc 7544340  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | | | ||||||||||||||  ||||||||||||||    
T  7544341 ccttccttcccctcctaaaccctccatccaaacaca 7544376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 16938484 - 16938719
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||  ||||||||| ||| | ||   ||||||||||||||| | |||||||||||||||    
T  16938484 gtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaattaagt 16938583  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||||||| ||||||||||||  || ||||||  |||||||| ||||||||||||  | |||||||||| ||||  ||||| || |    
T  16938584 gtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccctcc 16938683  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| |||| |||||||||  ||||||||||||||    
T  16938684 cctccattcctctcctaaaccctccatccaaacaca 16938719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 425 - 622
Target Start/End: Complemental strand, 4373805 - 4373608
Alignment:
Q  425 gtgtttggattgagggtttagga--ggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    |||||||||||||||||||||||  ||||||  | ||||  |||||||||||||||| ||||| ||   |||||||||| ||||||  ||||||||||||    
T  4373805 gtgtttggattgagggtttaggaagggaaaatagtggag--gatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaa 4373708  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||||||||| |||||||||||| |||||||||||| ||| ||||||| | ||||||||||||| ||||| || ||||||||||  |||||||||||||    
T  4373707 gtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaagtaaactct 4373608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 10476031 - 10476268
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaa-tcacaatctatata-acatgtttttataaaataaattaa 522  Q
    ||||||| |||||||||||||||||  |||||| |||| | |||||||||||||| |||| | |||   |||||| |||||||||| |||||||||||||    
T  10476031 gtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaattaa 10476130  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||||||||| |||||||| |||||||||||| ||| ||| ||   || || | ||||||||||||||| ||| ||||||||||  | |||||||| ||    
T  10476131 gtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaattataagtaaacact 10476230  T
Q  623 tccatcctttcccctcctaaactttccatccaaacaca 660  Q
     || ||| ||||||||||||||  ||||||||||||||    
T  10476231 cccctcccttcccctcctaaaccctccatccaaacaca 10476268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 464 - 660
Target Start/End: Complemental strand, 9798812 - 9798616
Alignment:
Q  464 gatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattat 563  Q
    ||||||||||||||||  |||| |||   |||||||||||||||| | ||||||||||| |||||||||| |||||||||||||||| ||||||||  ||    
T  9798812 gatttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaat 9798713  T
Q  564 tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
     || |||| |||||||| ||||| |||| | || |||||||||| ||||||||||||||  ||||| ||  |||||||||   ||||||||||||||    
T  9798712 attgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaagtaaactctcacatcccttttcctcctaaatcctccatccaaacaca 9798616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 8503007 - 8502839
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||| | || || |||||| ||| | | ||||||| ||||||||||||||||| |    
T  8503007 ctatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaatatttcataat 8502908  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || || |||||||||| ||||||| ||| || |||||| ||||| || |||||  ||||||||||||||    
T  8502907 gtccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacaca 8502839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 492 - 612
Target Start/End: Original strand, 9856952 - 9857072
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||| |||||||| ||||||||||    
T  9856952 ctatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaaacatttcatagt 9857051  T
Q  592 gttcgcaatttaaaaacgaaa 612  Q
    || || || ||||||| ||||    
T  9857052 gtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 28279716 - 28279480
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaag 523  Q
    |||||||||||||| || ||  |||  ||||||||||| | |||||||||| ||| ||||| |     ||||||||||||||||  ||||||||| ||||    
T  28279716 gtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaag 28279617  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    |||||||||| |||||||||||| |||||||||||| ||| ||||||| |||||||| |||||||| ||| |  |||||||||| |||||||||| | |     
T  28279616 tgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaagtaaattttc 28279517  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
     |  |||||||| ||| ||||  ||||||||||||||    
T  28279516 accccctttcccatcccaaaccctccatccaaacaca 28279480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 2550591 - 2550397
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||||||||||||| |||    |   ||||||||||||||||| || ||||||||| ||    
T  2550591 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgt 2550492  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaact-tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||| | | | |||||| || |||||||||  | |||||||||| |||||||||||    
T  2550491 gtgattgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaac 2550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 505 - 639
Target Start/End: Complemental strand, 36392309 - 36392176
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaa 604  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| ||||||||||||  | |||||||    
T  36392309 ttttctaaaatagattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaa 36392210  T
Q  605 aaacgaaaagtaaactcttccatcctttcccctcc 639  Q
    ||| ||||||||||| ||||  |||||||||||||    
T  36392209 aaatgaaaagtaaac-cttcactcctttcccctcc 36392176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 659
Target Start/End: Original strand, 36363035 - 36363271
Alignment:
Q  423 acgtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||||||||||||| |||  || ||||| ||   |||| ||||||| | ||||  ||   ||||||||||||||||| |||||||||| ||    
T  36363035 acgtgtttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaa 36363134  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||| |||||| | |||||| || |||||||||| || ||| |||||||  ||||| | |||| ||||| | || |||||||||| ||||||| ||||||    
T  36363135 gtgtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactct 36363234  T
Q  623 tccatcctttcccctcctaaactttccatccaaacac 659  Q
      | ||| ||||||||||||||  |||||||||||||    
T  36363235 ctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 557
Target Start/End: Original strand, 40815302 - 40815433
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| | |||||||||  |||||| |||| |||||||||||||||| ||||| |||  |||||||||||||||||||||||||||  ||||    
T  40815302 gtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaaataaa-aaagt 40815400  T
Q  525 gtgattgaattattatatgatcgtttatcatgt 557  Q
    ||||||||| |||||||| || |||||||||||    
T  40815401 gtgattgaaatattatataattgtttatcatgt 40815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 502 - 636
Target Start/End: Complemental strand, 20513611 - 20513473
Alignment:
Q  502 tgtttttataaaataaattaagtgtgattgaattattatat----gatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgc 597  Q
    |||||||||||||||||||||||||||||||| ||||||||    |||||||||||||| || ||| ||||||| |||||||| ||||||||||||  |     
T  20513611 tgtttttataaaataaattaagtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgt 20513512  T
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccc 636  Q
    | |||||||| ||||||||||  ||||| ||||||||||    
T  20513511 agtttaaaaatgaaaagtaaatccttccctcctttcccc 20513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 492 - 617
Target Start/End: Original strand, 42681525 - 42681652
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaata--tttcata 589  Q
    ||||||||||||||||| |||||||| || ||||||||| || |||||||||||| ||||||||||||||||||||| || ||||||||||  ||| |||    
T  42681525 ctatataacatgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaatatttttgata 42681624  T
Q  590 gtgttcgcaatttaaaaacgaaaagtaa 617  Q
    |||| |  ||||||||||| ||||||||    
T  42681625 gtgtgcataatttaaaaacaaaaagtaa 42681652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 495 - 618
Target Start/End: Complemental strand, 17024393 - 17024270
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgtt 594  Q
    |||||||||||||| |||||||||||||||  ||||||| |||||||||||||||| |||||||| |||  |||||| ||||| || |||||||| |||     
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtc 17024294  T
Q  595 cgcaatttaaaaacgaaaagtaaa 618  Q
     |||||||||||| ||||||||||    
T  17024293 tgcaatttaaaaatgaaaagtaaa 17024270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 492 - 619
Target Start/End: Original strand, 37606967 - 37607093
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||||| |||||||| ||||||||||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| ||||||||||    
T  37606967 ctatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagt 37607065  T
Q  592 gttcgcaatttaaaaacgaaaagtaaac 619  Q
     |  | | |||||||| |||||||||||    
T  37607066 atctgtattttaaaaatgaaaagtaaac 37607093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 37779184 - 37779302
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    |||||||| ||||||||||||  |||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||||||| |  | | |    
T  37779184 atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtatctgtagt 37779283  T
Q  601 ttaaaaacgaaaagtaaac 619  Q
    ||||||| |||||||||||    
T  37779284 ttaaaaatgaaaagtaaac 37779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 517 - 613
Target Start/End: Complemental strand, 20147013 - 20146917
Alignment:
Q  517 aattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    ||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| |||||||| |||||||||||  || |||||||||| |||||    
T  20147013 aattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaaa 20146917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 425 - 591
Target Start/End: Original strand, 11756883 - 11757048
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  | |||| | ||   |||  |||| |||| ||||| || | ||||||||||||||| | |||||||||||||||    
T  11756883 gtgtttggattgagggtttaggagggga-gggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagt 11756981  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||| || |||||||||||| ||||| |||||| ||| ||| ||  | ||||||||||| |||||    
T  11756982 gtgattaaagtattatatgatcatttatgatgttaatatgttagctcttaaaaaaatattttatagt 11757048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 425 - 559
Target Start/End: Original strand, 14681475 - 14681608
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||| ||  |||| || | ||||||||| ||||| |||   |||||||||||||||| ||||||||||||| |    
T  14681475 gtgtttggattgagggtttaggaggggaaggaagt-gatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaattaaat 14681573  T
Q  525 gtgattgaattattatatgatcgtttatcatgtta 559  Q
    |||||||||  | |||||||  |||||||||||||    
T  14681574 gtgattgaaggaatatatgactgtttatcatgtta 14681608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 660
Target Start/End: Original strand, 37551498 - 37551645
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||  |||||  | | |||||||| ||    
T  37551498 aaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatga 37551595  T
Q  611 aaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||  | |  ||| || ||||| |||||  ||||||||||||||    
T  37551596 aaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacaca 37551645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 511 - 660
Target Start/End: Original strand, 37654328 - 37654475
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||  |||||  | | |||||||| ||    
T  37654328 aaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttc--agtgtctgtagtttaaaaatga 37654425  T
Q  611 aaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||  | |  ||| || ||||| |||||  ||||||||||||||    
T  37654426 aaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacaca 37654475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 4959451 - 4959367
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||||||||| ||||||||||| ||| |||||| ||| |||||||||||| ||| |||||||| |||||| ||||    
T  4959451 aacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtatcacctacactttgaaaatgtaacc 4959367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 565 - 660
Target Start/End: Original strand, 1657958 - 1658053
Alignment:
Q  565 ttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||| |||||||| |||| ||||||| || |||||||||| ||||||||||| || || ||| ||||||||||||||  ||||||||||||||    
T  1657958 ttaactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacaca 1658053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 32050495 - 32050421
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||| ||||| || ||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  32050495 aagatgaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgta 32050421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 511 - 622
Target Start/End: Original strand, 43497 - 43610
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatg-atcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaa-tttaaaaac 608  Q
    |||| ||||||||| ||| |||| ||||| ||| ||| ||||| |||||| ||| ||||||| | |||||||||||||||||||||| || ||||||||     
T  43497 aaaaaaaattaagtatgactgaagtattacatgtatcttttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaat 43596  T
Q  609 gaaaagtaaactct 622  Q
    ||||||||||||||    
T  43597 gaaaagtaaactct 43610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 533
Target Start/End: Original strand, 22022852 - 22022963
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttct---aaatcacaatctatataacatgtttttataaaataaatta 521  Q
    |||||||||||||||||||||||||  || |||||||| |||||| |||| |||| |   |||| ||   ||||||||||| ||||| ||||||||||||    
T  22022852 gtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaataaatta 22022951  T
Q  522 agtgtgattgaa 533  Q
    ||||||||||||    
T  22022952 agtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 660
Target Start/End: Complemental strand, 14245204 - 14245092
Alignment:
Q  548 tttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaacttt 647  Q
    |||||||||||| ||| |||||||  ||||||| |||||| ||||| || |||||||||| ||||||||||  || || ||| ||||||||||||||  |    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccct 14245105  T
Q  648 ccatccaaacaca 660  Q
    | |||||||||||    
T  14245104 caatccaaacaca 14245092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 10204581 - 10204816
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| ||||||||||||||  |||||||| || |  | |||||| |||| ||||| || | | || ||| |||| ||| |||||||||||||||    
T  10204581 gtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaattaagt 10204680  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| |||||||||||| ||||| | ||| ||| || || || |||||||  ||||  || |||  | || ||||||| |||||||||   || |    
T  10204681 gtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagtcctcc 10204780  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||| ||  ||||||||||    
T  10204781 cctcccttcccctcctaaactctctttccaaacaca 10204816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 40305904 - 40305674
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||| |||||||| ||  | | | |||| |||| ||||| || | | || ||| ||||||||  |||||||||||||     
T  40305904 gtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaattaagg 40305805  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| || ||||||||| |||||||| || ||| || || ||  |||||| ||||| ||| |||  | |||||||||| ||||| |||      |    
T  40305804 gtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaa-----gc 40305710  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  40305709 cctcccttcccctcctaaaccctccatccaaacaca 40305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 550 - 660
Target Start/End: Original strand, 10650544 - 10650654
Alignment:
Q  550 tatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttcc 649  Q
    ||||||| || ||| ||||||| ||| |||| |||||||||| | || ||||||||||| ||||||||||| |  | ||| ||||||||| ||||||||     
T  10650544 tatcatggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttca 10650643  T
Q  650 atccaaacaca 660  Q
    |||||||||||    
T  10650644 atccaaacaca 10650654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 565
Target Start/End: Complemental strand, 33424979 - 33424901
Alignment:
Q  487 acaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||| || |||||||||||| ||||||||  ||||||||    
T  33424979 acaatttatataaaatgtttttataaaataaattaaatctgattaaagtattatatgatcatttatcattctattattt 33424901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 42224580 - 42224670
Alignment:
Q  79 aataagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||||| ||||| || ||||||||||||||||| ||| |||| |||||| ||| |||||| ||||||||||||||||  || ||||||||    
T  42224580 aataagaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgtaggacctacacttt 42224670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 613
Target Start/End: Original strand, 27110120 - 27110220
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaa 611  Q
    ||||||||||||||||||| || |||||||||||| ||||| || ||| | |||||| || || |||||||||| ||||| |||| |||||||||| |||    
T  27110120 aaataaattaagtgtgattaaaatattatatgatcatttattatattaatgttttaaatt-tttaaaaatattttatagtattcgtaatttaaaaaagaa 27110218  T
Q  612 aa 613  Q
    ||    
T  27110219 aa 27110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 40971633 - 40971564
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| |||||| | ||||||||||||||    
T  40971633 gaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgta 40971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 42224771 - 42224702
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| ||||||  |||||||||||||||    
T  42224771 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgta 42224702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 14245093 - 14245153
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||||||||||||  |||||||| || |||||||||||||||| |||||    
T  14245093 gtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaat 14245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 619
Target Start/End: Complemental strand, 29002359 - 29002251
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    |||||||||||| | |||||| | ||||||||||||||||||||||||| ||| ||   ||   |||||| |||| |||||||||  |||||||||| ||    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatga 29002260  T
Q  611 aaagtaaac 619  Q
    |||||||||    
T  29002259 aaagtaaac 29002251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 622
Target Start/End: Complemental strand, 13839864 - 13839770
Alignment:
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||||| ||||||||||| || |||||||||||||||| ||||| | |||| | |||| ||||||| |  |||||||||| ||||||||| ||||    
T  13839864 attgaagtattatatgattgtctatcatgttattatttcaacttttcaaaatacattttatagtgtccataatttaaaaaagaaaagtaagctct 13839770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 24915227 - 24915144
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||| ||||||  |||||||||| ||| |||||| ||||||||||||||||  || |||||||| |||||| ||||    
T  24915227 caacactctcttttaagcact--ctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacc 24915144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 24991058 - 24990975
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||| ||||||  |||||||||| ||| |||||| ||||||||||||||||  || |||||||| |||||| ||||    
T  24991058 caacactctcttttaagcact--ctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacc 24990975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 428 - 589
Target Start/End: Original strand, 21580955 - 21581116
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    ||||||||| |||||| ||||  ||||||||| || |  | |||||| |||||||||| || | | || ||| || ||||| |||||||||||||||||     
T  21580955 tttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataaattaagtgtt 21581054  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcata 589  Q
     ||||| ||| |||||| | ||||||||||| ||| || || ||  |||||| |||||||||    
T  21581055 tttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcata 21581116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 428 - 660
Target Start/End: Complemental strand, 33744429 - 33744197
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    |||||||||||||||||||||   |||||||| || |  | |||||| | || ||||| || | | ||  || |||||||| |||||||||||||||||     
T  33744429 tttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaattaagtgtt 33744330  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaat-atttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcca 626  Q
     |||||  | ||||||||| ||||||||||| ||| || || || | ||||||| |||| ||| ||| |  |||||||||| ||||||||||| || ||     
T  33744329 tttgaagaaatatatgatcatttatcatgttgttaattcaa-ttttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaaaccctcccc 33744231  T
Q  627 tcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| ||| || ||| |||  ||||||||||||||    
T  33744230 tcccttctccgccttaaccctccatccaaacaca 33744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 26072286 - 26072218
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgt 155  Q
    ||||| || ||||||||||||||||||| | ||||||||||| ||| |||||| |||||||| ||||||    
T  26072286 gaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgt 26072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 40971459 - 40971543
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaac 180  Q
    |||||||||||||||| |||| | |||| |||| ||| |||||| |||| |||||||||||| || ||||||||  |||||||||    
T  40971459 caacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgtaagacctacactttggaaatgaaac 40971543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 523 - 622
Target Start/End: Complemental strand, 32727918 - 32727819
Alignment:
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||| ||||||||||| ||||||||||||||||||| ||| ||   || ||||||||||||||||| |   || ||||||||||  ||| |||||||||    
T  32727918 gtgtggttgaattattacatgatcgtttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaataaaatgtaaactct 32727819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 4959273 - 4959347
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||| ||||| || ||||||||||||||||||||| ||||||  ||  ||| |||||| ||||||||||||||||    
T  4959273 aagaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgta 4959347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 39966123 - 39966061
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcat 555  Q
    |||||||||| ||||| | |||||||||||  ||||||||||||||||||||| |||| ||||    
T  39966123 tatataacatattttttttaaataaattaaacgtgattgaattattatatgattgtttttcat 39966061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 6264055 - 6263994
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaa 157  Q
    |||||||||||||| |||||| | ||||||||| ||| |||||  |||||||||||||||||    
T  6264055 caacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgtaa 6263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 533
Target Start/End: Original strand, 10650434 - 10650542
Alignment:
Q  427 gtttggattgagggtttaggagg--aaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||| |||| |||||||||  |||||||||| || |||||||||||  ||| ||||| ||   |  ||| | |||||||| |||||||||||||||    
T  10650434 gtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagt 10650533  T
Q  525 gtgattgaa 533  Q
    |||||||||    
T  10650534 gtgattgaa 10650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 34980899 - 34980814
Alignment:
Q  575 aaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||||| |   |||||| ||||||||||  |||||| ||| ||||| ||| |||||||||||||| ||| |||||||||||    
T  34980899 aaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacaca 34980814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 34980815 - 34980948
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||||||||  ||||||||  | | || ||||||  ||| ||||| || | | |  ||| || ||||| |||||||||||||||    
T  34980815 gtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaattaagt 34980914  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  ||||| |||||||| ||| |||||||||||    
T  34980915 gtttttgaagtattatataatcatttatcatgtt 34980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 13456167 - 13456256
Alignment:
Q  90 tgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| ||||||||||||||||| |||  |||||||||| ||| ||||||  |||||||||||||||   | |||||||| |||||| ||||    
T  13456167 tgttagcaacactctcttttgagtact--ctctagcactcactcttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacc 13456256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 34818359 - 34818275
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||| ||||||||||||||| |||||| |||| ||||||||||  ||| |||||||||||  || || |||||| ||||| ||||    
T  34818359 aacattctcttttgagcactctctctaacactcacttttttatttggtaaaatcaatgtaggacctatactttagaaatggaacc 34818275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 615
Target Start/End: Original strand, 10043264 - 10043447
Alignment:
Q  432 gattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattg 531  Q
    |||||| |||||| ||||  |||||||| ||||| | |||||| |||| ||||| || | | || ||| || || || ||||| |||||||||||  |||    
T  10043264 gattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaattaagtgtttttg 10043363  T
Q  532 aattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    || |||||||||||  ||||| ||||| ||| || || ||  ||||||  |||| ||| | |||| |||||||||| |||||||    
T  10043364 aagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagt 10043447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 6263883 - 6263949
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    ||||||||  |||||||||||||||||||| |||||| |||| |||  ||||| |||| ||||||||    
T  6263883 gaatgttagtaacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaat 6263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 579
Target Start/End: Complemental strand, 8551657 - 8551503
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||||||||  ||| |||| |  |  | |||||| |||| ||||| || | | || ||| |||| |||  ||||||||||||||    
T  8551657 gtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaattaagt 8551558  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaa 579  Q
    ||  || || |||||||||||| ||||| ||||| ||| ||||| || |||||||    
T  8551557 gtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaa 8551503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 485
Target Start/End: Complemental strand, 10043489 - 10043431
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||  |||||||||||||||||||| || || | ||||||||||| |||||    
T  10043489 gtttggattgattgtttaggaggaaaagggaggggaggactcacttttcttttttaaat 10043431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 17568699 - 17568781
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||| || ||||||||||||||||||||| || |||||||  ||| |||||| || |||||| ||||||  || ||||||||    
T  17568699 gaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacacttt 17568781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 589
Target Start/End: Original strand, 22023483 - 22023537
Alignment:
Q  536 attatatgatcgtttatcatgttattattttaac-ttattaaaaaatatttcata 589  Q
    |||||||||||||||||||||||| ||| ||||| || |||||||| ||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcata 22023537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 26414959 - 26414897
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||||||||||||||| || || ||| ||| ||||||||||  || |||||||||||    
T  26414959 aatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacaca 26414897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 479
Target Start/End: Original strand, 30006625 - 30006679
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttctttt 479  Q
    ||||||| || ||||||||| || |||||||||||||| ||||||||||| ||||    
T  30006625 gtgtttgaatggagggtttaagaagaaaagggaggagaagatttacttttttttt 30006679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 565
Target Start/End: Original strand, 35244004 - 35244058
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||| |||||||||  |||||||| ||| ||||||||||| ||||||    
T  35244004 aaaataaattaaatgtgattgagatattatataatcatttatcatgtttttattt 35244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 8912695 - 8912599
Alignment:
Q  87 gaatgttatcaacactctcttttgagcac--tttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||| ||||| ||||||||||||||  | |||||| |||| ||| ||||||  |||||||||||| ||  || ||||||||  ||||||||||    
T  8912695 gaatgttagcaacagtctcttttgagcacactctctctatcactcactcttttattaggtgaaatcaatatatgacatacactttggaaatgaaacc 8912599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 599 - 660
Target Start/End: Complemental strand, 13634776 - 13634715
Alignment:
Q  599 atttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||| ||||||||||| || || ||| ||||||||||||||  || |||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 13634715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 1658052 - 1657992
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||||||||||  |||||||| || | |||||||||| ||| |||||    
T  1658052 gtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaat 1657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 510 - 558
Target Start/End: Original strand, 1977622 - 1977670
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||| ||||| || |||||||| |||||||||||| |||||||||||    
T  1977622 taaaatcaattaggtttgattgaagtattatatgatcctttatcatgtt 1977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 601 - 661
Target Start/End: Original strand, 2550533 - 2550593
Alignment:
Q  601 ttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacat 661  Q
    ||||||| ||||||||||| || || ||| ||||||||||||||  || ||||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacat 2550593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 427 - 483
Target Start/End: Complemental strand, 6382564 - 6382508
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaa 483  Q
    ||||||||||| |||||||||||| ||  ||||  |||| |||||||||||||||||    
T  6382564 gtttggattgaaggtttaggaggataaaagagggaatgacttacttttcttttctaa 6382508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 10977203 - 10977235
Alignment:
Q  43 ttaattttttaattttaaccatttgatctattt 75  Q
    ||||||||||||||||| |||||||||||||||    
T  10977203 ttaattttttaattttatccatttgatctattt 10977235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 11419359 - 11419303
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    |||||||||||||| ||||| ||    |||||||||||||||| |||||||||||||    
T  11419359 tttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 13634950 - 13634890
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||||||||||||  |||||||| || |  ||||||||| ||| |||||    
T  13634950 gtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaat 13634890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 576 - 660
Target Start/End: Original strand, 14245202 - 14245286
Alignment:
Q  576 aaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||| |||||| ||||| || |||||||||| |||||  |||| || || ||| ||||||||||||||  || |||||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 14245286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 33744198 - 33744258
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||| ||| ||| |||||||| || | |||||||||||||| |||||    
T  33744198 gtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaat 33744258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 5e-61; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 24560222 - 24560457
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||| |||||||||||||  |||||||| || | |||  ||||||||| ||||| ||   |||| |||||||||||| ||||||||||||| |    
T  24560222 gtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaat 24560321  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||  | |||||||||| |||||||||||||| |    
T  24560322 gtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaagtaaactctcc 24560421  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||| ||||||||||||||  ||||||||||||||    
T  24560422 catccgttcccctcctaaaccctccatccaaacaca 24560457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 466 - 610
Target Start/End: Complemental strand, 2387958 - 2387814
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2387958 tttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgttattattt 2387859  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    ||||||||||||||| ||| |||||||| || |||||||||||||    
T  2387858 taacttattaaaaaacattccatagtgtccgtaatttaaaaacga 2387814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 41110560 - 41110325
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||  ||||  |||||||  || | |||||||||| ||| ||||| ||   ||| |||||||||||||  ||||||||||||||    
T  41110560 gtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaattaagt 41110461  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||| ||||||||||||| ||| ||||||| ||| ||||||||||||||||| || |||||||||| ||||||||||| ||||    
T  41110460 gtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaac-cttc 41110362  T
Q  625 -catcctttcccctcctaaactttccatccaaacaca 660  Q
     | ||| |||||||||||||   ||||||||||||||    
T  41110361 tcctcccttcccctcctaaatcctccatccaaacaca 41110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 426 - 619
Target Start/End: Original strand, 21773788 - 21773981
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    |||||||||||| |||||||||||  |||||| |  | | | |||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaattaagtg 21773887  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||||  |||||||||| ||||||||||| | ||| ||||||| |||||||| ||||| ||||||||| ||||||||||  ||||||||||    
T  21773888 tgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaac 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 495 - 660
Target Start/End: Complemental strand, 36569072 - 36568908
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgtt 594  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||| || ||||| |||||||||||||    
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgtt 36568973  T
Q  595 cgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || |||||||||| ||||| |||||||| || ||| |||| |||||||||  ||||||||||||||    
T  36568972 cgaaatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccctccatccaaacaca 36568908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 426 - 619
Target Start/End: Complemental strand, 220635 - 220442
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    ||||||||| ||||||||||||||| |||||||| ||  ||||||||||||||| ||||| ||   |||| |||||||||||| |||||||||| ||||     
T  220635 tgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagta 220536  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||||||| | ||||| ||| |||||| |||||| ||| ||||||| |||||||| |||||||| ||| || |||||||||| ||||| |||||    
T  220535 tgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaac 220442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 425 - 643
Target Start/End: Complemental strand, 25655211 - 25654991
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||| | ||||| |||||||| || | ||||  |||| ||| ||||| ||   ||||||||||||||||| |||||||||||||||    
T  25655211 gtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 25655112  T
Q  525 gtgattgaattat--tatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||||||| |||  ||||||||| |||||||| ||| ||| ||||||  | |||||| ||||| ||||||||| ||| |||||| ||||||||||| ||    
T  25655111 gtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaaccct 25655012  T
Q  623 tccatcctttcccctcctaaa 643  Q
     || ||| |||||||||||||    
T  25655011 cccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 469 - 619
Target Start/End: Original strand, 37807129 - 37807279
Alignment:
Q  469 acttttcttttctaaatcacaatctatataacatgtttttataaaat-aaattaagtgtgattgaattattatatgatcgtttatcatgttattatttta 567  Q
    ||||||||||| ||||  || | ||||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||    
T  37807129 acttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatatta 37807227  T
Q  568 acttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||| |||||||| |||||||||||| |  ||||||||||||||||||||||    
T  37807228 actttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaagtaaac 37807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 425 - 571
Target Start/End: Original strand, 14897981 - 14898127
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| ||||||||||  |||||||  ||   |||||||||||||| ||||| |||  |||||| |||||||||| |||||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagt 14898080  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaactt 571  Q
    ||||||||| ||||||||||||||||||| ||||| ||| |||||||    
T  14898081 gtgattgaagtattatatgatcgtttatcgtgttaatatattaactt 14898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 18654772 - 18654604
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||||||||||| ||| ||||||  | ||||||||||| ||||     
T  18654772 ctatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagg 18654673  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || || |||||||||| ||||  ||||| || |||||  || |||||||||||  ||||||||||||||    
T  18654672 gtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacaca 18654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 466 - 666
Target Start/End: Complemental strand, 40464069 - 40463869
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||||||||||||||||||||    ||| ||||||| ||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||    
T  40464069 tttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattgaatttttatatgattgtttatcatgttattgttt 40463970  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattctt 665  Q
    |||  | |||||||| | || ||||||| || |||||||||| |||||||| || ||  |||| |||  |||| |||||  | |||||||||||| ||||    
T  40463969 taatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaagtacacactctcatcgtttatcctcataaacccttcatccaaacacactctt 40463870  T
Q  666 a 666  Q
    |    
T  40463869 a 40463869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 425 - 589
Target Start/End: Complemental strand, 43005978 - 43005814
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||  ||| ||||| | |||| |||||| ||||||||| |||||  ||| ||||||||||| ||||| ||||||||||| | |    
T  43005978 gtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaatttaat 43005879  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcata 589  Q
     |||||||| |||||||||||  |||||||| ||| ||| ||||||| |||||||||||||||||    
T  43005878 ttgattgaagtattatatgatattttatcatattaatatgttaactttttaaaaaatatttcata 43005814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 496 - 660
Target Start/End: Complemental strand, 41040118 - 41039954
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttc 595  Q
    |||||||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||| ||| ||||||| ||| |||||||||||||||||      
T  41040118 ataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtct 41040019  T
Q  596 gcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    | |||||||||  ||||| ||||  || |  ||  |||||||||||||| |||||||||||||||    
T  41040018 gtaatttaaaattgaaaattaaagcctacgctctcttcccctcctaaaccttccatccaaacaca 41039954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 494 - 660
Target Start/End: Complemental strand, 16275875 - 16275709
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    ||||||||||||||| |||||||||| ||||||||||||| ||||||||| | ||||||||||||| ||  ||||||| ||| |||| |||||||| |||    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  594 tcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
     || |||||||||| ||| ||| |||||| || ||| || ||||  |||||  ||||||||||||||    
T  16275775 ccgaaatttaaaaatgaatagtgaactctcccctccctttcccttataaaccatccatccaaacaca 16275709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 645
Target Start/End: Original strand, 46556189 - 46556369
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatat--gatcgtttatcatgttattat 563  Q
    |||| ||||||||| ||||| |||  |||||||| ||||||||  |||||||||| |||||||||||| ||||||||  || ||||| |||||||| |||    
T  46556189 tttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtcatgttaatat 46556288  T
Q  564 tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaact 645  Q
     ||||||| ||||||||||| ||||||||| || |||| ||||| ||||||||||| || || ||| |||| ||||||||||    
T  46556289 cttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaagtaaac-ctcccctccattcctctcctaaact 46556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 466 - 619
Target Start/End: Original strand, 651777 - 651929
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| | |  ||||||||||||||||| ||||||||||||||||||||| || ||||||| |||| ||| ||||||||||||||    
T  651777 tttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgattaaaatattatacgatcctttgtcatgttattattt 651876  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||| || || ||||| |||||||||| | |  ||||||||||| | ||||||||    
T  651877 taa-tttttcaaaaacatttcatagtttccataatttaaaaacaataagtaaac 651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 12790378 - 12790572
Alignment:
Q  425 gtgtttggattgagggtttaggag--gaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||||||||||||||  ||| || |||||| |   ||||||||||||| || ||   |  ||||||||||||||||| || ||||||||||    
T  12790378 gtgtttggattgagggtttaggagaggaagagagaggaggt---ttacttttcttttttatattgtaggctatataacatgtttttctataataaattaa 12790474  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaa-cttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||| || ||| || ||||||||| || ||||||||||||||||||  || ||||||||||||||||| |||||  ||||||||| | ||||||||||    
T  12790475 gtgtaatcgaagtaatatatgatctttcatcatgttattattttaatttttttaaaaaatatttcataatgttcataatttaaaatcaaaaagtaaac 12790572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 436 - 619
Target Start/End: Complemental strand, 30200319 - 30200133
Alignment:
Q  436 gagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaatt 535  Q
    |||||| |||||||  ||||||||  | | |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||| |||||||||| || |    
T  30200319 gagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagt 30200220  T
Q  536 attatatgatc---gtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    | |||||||||   |||||| |||||| ||| | ||||| |||||||| |||||||||||| || |||||||||| ||||| |||||    
T  30200219 actatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 466 - 619
Target Start/End: Complemental strand, 37102347 - 37102194
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattatt 564  Q
    ||||||| |||||| ||||| ||   |||||||||||||||||  |||||||||| ||||||| ||||| ||||||||||||||| || |||||| |||     
T  37102347 tttacttatcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattatatgatcgtt-attatgttaatatg 37102249  T
Q  565 ttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||| |||||||| |||||||||||| || |||||||||| ||||| |||||    
T  37102248 ttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaac 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 425 - 551
Target Start/End: Original strand, 46204891 - 46205017
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| |||||||||| |||| ||| || ||||   |||||||||||||| ||||| |  | ||||||||||||||||| |||||||||||||||    
T  46204891 gtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagt 46204990  T
Q  525 gtgattgaattattatatgatcgttta 551  Q
    ||||||||| |||||||||||| ||||    
T  46204991 gtgattgaagtattatatgatcattta 46205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 613
Target Start/End: Complemental strand, 9312708 - 9312522
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacat---gtttttataaaataaatta 521  Q
    |||||||||||||||||||||||||     ||||| || | |||  ||||||||| ||||| ||   |||||||||||   | |||| ||||||||||||    
T  9312708 gtgtttggattgagggtttaggagg-----ggaggggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaatta 9312614  T
Q  522 agtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    |||||||||  | ||||||||||| ||||||||||||| ||| ||||||| ||| |||||||||||||||||  | |||||||||| |||||    
T  9312613 agtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaa 9312522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 471 - 658
Target Start/End: Complemental strand, 27542124 - 27541937
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| |  | ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||  |    
T  27542124 ttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattatatgatcgtttatcatgttaatatgttagat 27542025  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    | |||| || |||||||||||||    |||||||||| |||| || |||  |  | ||| ||||||||||||||  || |||||||||    
T  27542024 ttttaacaagtatttcatagtgtctctaatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 493 - 644
Target Start/End: Original strand, 52473988 - 52474139
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    ||||||||||||| || ||||||||||||  |||||||||| ||||||||||  ||||||||| ||| ||| ||||||| ||| ||||||||||||||      
T  52473988 tatataacatgttattttaaaataaattacatgtgattgaagtattatatgactgtttatcatattaatatgttaactttttacaaaatatttcatagga 52474087  T
Q  593 ttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaac 644  Q
    | || ||||||||||  |||||||||| || |  ||| ||||||||||||||    
T  52474088 tccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaac 52474139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 54751866 - 54751794
Alignment:
Q  280 tttaatctaaaagtcaaaattaatggtacaccgatgagagacttagttaaaccctcatcctataatccaccca 352  Q
    |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  54751866 tttaatataaaagtcaaaattaatggtacaccgatgagagacttatttgaaccctcatcctagaatccaccca 54751794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 425 - 564
Target Start/End: Complemental strand, 28582748 - 28582609
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||| ||||| |||||||||  |||||||| || | |||||||||||||| ||||| ||   | ||||||||||||||| ||| |||||| ||||    
T  28582748 gtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagt 28582649  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattatt 564  Q
    ||| ||||| |||||||| ||||||||| |||||| ||||    
T  28582648 gtggttgaagtattatattatcgtttattatgttaatatt 28582609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 466 - 585
Target Start/End: Original strand, 52185061 - 52185181
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattatt 564  Q
    |||||||||| ||| ||||| ||||  ||||||||||||||||  ||||||||||||| | | |||||| ||||||||||| ||||||||||||| |||     
T  52185061 tttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatatg 52185160  T
Q  565 ttaacttattaaaaaatattt 585  Q
    ||||||| ||| |||||||||    
T  52185161 ttaactttttataaaatattt 52185181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 38928001 - 38928088
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    |||||||||| || |||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||||||||||| || ||||||||    
T  38928001 aagaagaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgtaagacctacacttt 38928088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 24253726 - 24253962
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgattt-acttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    ||||||||||||||||||||||||| ||||||||| |  |  || ||||||  ||| ||||| |  | | || ||| ||  |||| ||||||||||||||    
T  24253726 gtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaattaag 24253825  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    |||  ||||| | |||||| ||| ||||||||||| ||| || |||||  |||||   |||| ||| ||| || |||||||||| ||||||||||  |||    
T  24253826 tgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatcctt 24253925  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || ||| ||||||| ||||||  ||||||||||||||    
T  24253926 ccctcccttccccttctaaaccctccatccaaacaca 24253962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 17474445 - 17474210
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||| ||||||  |||||||| ||   || |||||| |||| ||||| || |   || ||| || |||||  ||||||||||||||    
T  17474445 gtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaagt 17474346  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| |||||| ||||  |||||||| || ||| || || || | ||||| ||||| ||| ||| || |||||||||| |||||||||||| |||    
T  17474345 gtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaacttttc 17474246  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    |||   || |||||||||||  || |||||||||||    
T  17474245 cattactttccctcctaaaccctcaatccaaacaca 17474210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 54140890 - 54140984
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||  ||||| || |||||||||||||  || |||||||| |||||| ||||    
T  54140890 gaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgtagaacctacactttgaaaatggaacc 54140984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 542
Target Start/End: Complemental strand, 6803440 - 6803323
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||||||||  ||| |||||||   |||| ||||||||| ||||| |||  ||||  || | ||||||||||||||||||| ||    
T  6803440 gtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagtttttataaaataaattatgt 6803341  T
Q  525 gtgattgaattattatat 542  Q
    ||||||||| ||||||||    
T  6803340 gtgattgaactattatat 6803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 493 - 661
Target Start/End: Complemental strand, 10748468 - 10748298
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatg-------atcgtttatcatgttattattttaacttattaaaaaatattt 585  Q
    |||||||||||||||| ||||||||||||||||||||  || |||||||||       ||| |||||||||||| ||| ||||||| |||||||| ||||    
T  10748468 tatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaactttttaaaaaacattt 10748369  T
Q  586 catagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacat 661  Q
     ||| ||  || |||||||||| | ||| |   ||||||  ||| ||||||||||||||  |||||||||||||||    
T  10748368 tataatgcccgtaatttaaaaatgtaaact---ctcttc--tcccttcccctcctaaaccctccatccaaacacat 10748298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 10769732 - 10769816
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||||||||| ||||||||||||||| ||||||  | |||||||||||||  || ||||||||| ||||| ||||    
T  10769732 aacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgtaggacctacactttagaaatggaacc 10769816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 660
Target Start/End: Original strand, 34641077 - 34641230
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaa 604  Q
    |||| |||||||||||||||||  ||||| |||||||||||| ||||||||||| ||| || ||  | ||  |||  |||| ||| ||| || |||||||    
T  34641077 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaa--ttttctaaatcattttataatgtccgtaatttaa 34641174  T
Q  605 aaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| ||||||||| | || || ||| ||||||||||||||  ||||||||||||||    
T  34641175 aaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 34641230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 37600316 - 37600241
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||  ||| |||||| ||||||||||||||||    
T  37600316 taagaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 37600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 568
Target Start/End: Complemental strand, 51819296 - 51819221
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaa 568  Q
    ||||||| || ||||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||    
T  51819296 tatataatatatttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgttaattttttaa 51819221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 426 - 564
Target Start/End: Complemental strand, 16884209 - 16884071
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    |||||||||||||||||||||||   |||||| || | || | |||||| |||| ||| | || | | || ||| |||| ||| ||||||||||||||||    
T  16884209 tgtttggattgagggtttaggagaggaagggatgataagactcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtg 16884110  T
Q  526 tgattgaattattatatgatcgtttatcatgttattatt 564  Q
    |  ||||| |||||||||||| ||||||||||| |||||    
T  16884109 tttttgaagtattatatgatcatttatcatgttgttatt 16884071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 555
Target Start/End: Complemental strand, 54574595 - 54574470
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||     ||||| | |||  |||  ||||||||| | ||| |||  |||||||||| |||||| ||||||||||||||     
T  54574595 gtgtttggattgagggtttagga-----agggaagggatagtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaagc 54574501  T
Q  525 gtgattgaattattatatgatcgtttatcat 555  Q
    ||||||||| |||||||| | ||||||||||    
T  54574500 gtgattgaagtattatataaccgtttatcat 54574470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 622
Target Start/End: Original strand, 55327446 - 55327572
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttc 595  Q
    |||||||| |||| | |||||||| || ||||||||||  |||||||| |||||||| |||||| ||   |||||| |||||||| |||||||| ||| |    
T  55327446 ataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactttttaaaaaacatttcataatgtcc 55327545  T
Q  596 gcaatttaaaaacgaaaagtaaactct 622  Q
    |  |||||||||||||||  |||||||    
T  55327546 gtgatttaaaaacgaaaaccaaactct 55327572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 21232702 - 21232633
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || |||||| |||||||||||||||||| ||||||| | |||||||| ||||||||||||||||    
T  21232702 gaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgta 21232633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 24748916 - 24749001
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||||||||||||||||||| |||||| |||| ||| |||||| || |||||||||||||  || ||||||||| ||||| ||||    
T  24748916 caacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacc 24749001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 644
Target Start/End: Original strand, 26135805 - 26136021
Alignment:
Q  423 acgtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||||||||||||||| || |||||||||      | |||||| |||| ||||| |  | | || ||| ||||||||  ||||||||||||    
T  26135805 acgtgtttggattgagggtttaggaagagaagggaggac-----tcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaa 26135899  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||  ||||| |||||||| ||  |||||||| || ||| || || ||   ||||| ||||| ||| ||| || |||||||||| ||||||||||| ||    
T  26135900 gtgtttttgaagtattatataattatttatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaaaccct 26135999  T
Q  623 tccatcctttcccctcctaaac 644  Q
     |  ||| ||||||||||||||    
T  26136000 ccactcccttcccctcctaaac 26136021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 54141072 - 54141004
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||| ||||||| ||||||||||||| ||||||||||| |||  ||||| ||||||||||||||||    
T  54141072 aatgttaacaacactttcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 54141004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 55428618 - 55428566
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttctt 477  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  55428618 gtgtttggattgagggtttaggaggggaagggaggggatgatttacttttctt 55428566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 596
Target Start/End: Complemental strand, 45663303 - 45663213
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcg 596  Q
    |||| ||||||||||||  |||||||||| ||||||| |||| ||||||||||| |||||| || || | ||||||||||| ||||||||||    
T  45663303 ttttttaaaataaattatatgtgattgaagtattataagatcatttatcatgttgttatttcaa-ttttcaaaaaatattttatagtgttcg 45663213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 37600127 - 37600221
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || ||||||||||||||||||||| ||||||||||  ||| |||||| || |||| ||||||||  || ||||||||| ||||| ||||    
T  37600127 gaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgtaggacctacactttagaaatggaacc 37600221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 46237223 - 46237157
Alignment:
Q  90 tgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| ||||||||||||||||||||| ||||||||| | ||| |||||| || |||||||||||||    
T  46237223 tgttagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgta 46237157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 21090310 - 21090177
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| ||||||||||   ||||||||||| || | |||||| |||| ||||| |  | | || ||| || ||||| |||||||||||||||    
T  21090310 gtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaagt 21090211  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  ||||| |||||||||||  | |||||||||    
T  21090210 gtttttgaagtattatatgataatatatcatgtt 21090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 660
Target Start/End: Original strand, 23028005 - 23028166
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaa-----atatttcatagtgttcgca 598  Q
    ||||| ||||||||||  |||||||  ||| ||||||||||||||| |||| ||||||| ||||| ||   |||||     |||||||||||||| || |    
T  23028005 tttttctaaaataaatatagtgtgagcgaagtattatatgatcgttgatcacgttattaatttaaatttaaaaaaatatatatatttcatagtgtccgta 23028104  T
Q  599 atttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||  ||||||||   || || || |||||||||| ||||  ||||||||||||||    
T  23028105 atttaaaaataaaaagtaagtcctgccctcttttcccctcccaaaccctccatccaaacaca 23028166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 48683693 - 48683806
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatc-atgttattattttaacttattaaaaaatatttcatagtgttcgcaa 599  Q
    |||||||| |||||||||||||||||  ||||| |||||||||||| |||||| ||||| ||| || || ||  ||||||  |||| ||| |||||| ||    
T  48683693 atgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatcaatgttgttaattcaatttcctaaaaatcattttataatgttcgtaa 48683792  T
Q  600 tttaaaaacgaaaa 613  Q
    |||||||| |||||    
T  48683793 tttaaaaaagaaaa 48683806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 536
Target Start/End: Original strand, 31684362 - 31684402
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaatta 536  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattgaatta 31684402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 558
Target Start/End: Original strand, 41414084 - 41414216
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    ||||| |||||||||||||||||| ||||||||| || |  | |||||| |||| ||||| |  | | |  ||| |||||||| |||||||||| ||| |    
T  41414084 tgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaatcaagcg 41414183  T
Q  526 tgattgaattattatatgatcgtttatcatgtt 558  Q
    |  ||||| |||||||||||| |||||||||||    
T  41414184 tttttgaagtattatatgatcatttatcatgtt 41414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 29775139 - 29775219
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||| || ||||||||||||||||||||| ||||||||||  ||| |||||| |||||||||||| |||  || ||||||||    
T  29775139 gaatgctagcaacactctcttttgagcactctctctagcac--actcttttattgggtgaaatcaaggtaggacctacacttt 29775219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 467 - 546
Target Start/End: Original strand, 49815469 - 49815547
Alignment:
Q  467 ttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatc 546  Q
    ||||||||||||| ||||| ||||    ||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||    
T  49815469 ttacttttcttttttaaattacaagtactataaaatgttttta-aaaataaattaagcgtgattgaagtattatatgatc 49815547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 5123303 - 5123249
Alignment:
Q  21 atgtggtttaccataaattttgttaattttttaattttaaccatttgatctattt 75  Q
    ||||||| ||||||| |  || |||||||||||||||||||||||||||||||||    
T  5123303 atgtggtctaccatagaccttattaattttttaattttaaccatttgatctattt 5123249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 582
Target Start/End: Complemental strand, 13083010 - 13082945
Alignment:
Q  516 aaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaata 582  Q
    |||| |||||| |||||| |||||||||||||||||| |||||| ||| ||||||| ||||||||||    
T  13083010 aaatgaagtgtaattgaagtattatatgatcgtttattatgttaatatgttaactt-ttaaaaaata 13082945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 561
Target Start/End: Original strand, 37237013 - 37237063
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    ||||||||||||||||||||||| || || |||||| ||||||||||||||    
T  37237013 aaaataaattaagtgtgattgaagtactaaatgatcatttatcatgttatt 37237063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 10769905 - 10769836
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| |||||| |||  ||| ||||||  |||||||||||||||    
T  10769905 gaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgta 10769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 658
Target Start/End: Complemental strand, 10943852 - 10943620
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    ||||||||||||||||||| |||| |||| |||| || | || ||||||  ||| ||||| || | | ||  || |||||||| ||||||||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc- 624  Q
    |  ||||| |||||||| ||  ||||| ||||| ||| || || ||  ||||||  |||| ||| | |    |||||||||| ||||| |||| |||||     
T  10943752 tttttgaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaagaaaattaaa-tcttct 10943654  T
Q  625 catcctttcccctcctaaactttccatccaaaca 658  Q
    | |||||||||||| |||||  ||||||||||||    
T  10943653 cctcctttcccctcttaaaccctccatccaaaca 10943620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 40858646 - 40858703
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||| ||||||||||| |||||  ||||| |||||||||||| |||||||||||    
T  40858646 atgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgtt 40858703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 42699782 - 42699721
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcat 555  Q
    |||||| || |||||| ||||||||||||||||  ||||| |||||||||||| ||||||||    
T  42699782 atataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcat 42699721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 536
Target Start/End: Complemental strand, 31894056 - 31894016
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaatta 536  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattgaatta 31894016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 40716041 - 40715973
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||| |||||||| ||||| | |||| ||||||||||| ||| ||||||| |||||||| ||||||    
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgta 40715973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 558
Target Start/End: Complemental strand, 54996834 - 54996786
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||| ||| ||||||||||||| |||||||||||| |||||||||||    
T  54996834 taaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 485
Target Start/End: Original strand, 27541937 - 27541996
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    ||||||||||||||||||||||||  ||||||||||||| || || |||| ||| |||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaat 27541996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 558
Target Start/End: Original strand, 42772123 - 42772170
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||||||||||||||  ||||| |||||||||||| |||||||||||    
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 42772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 667
Target Start/End: Original strand, 17474359 - 17474453
Alignment:
Q  573 ttaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattcttaa 667  Q
    ||||||||||||| | | | |||| ||||||||||  |||||| |||||| || ||| |||||||||| |||  || |||||||||||| |||||    
T  17474359 ttaaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacacatccttaa 17474453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 558
Target Start/End: Original strand, 44412445 - 44412499
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||||||||||||  ||||| |||||||||||  |||||||||||    
T  44412445 tttttttaaaataaattaagtgtttttgaagtattatatgatgatttatcatgtt 44412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 565
Target Start/End: Complemental strand, 47989133 - 47989064
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| |||||||| ||||||||||||| ||||||||||  ||||||  ||  ||||||||||||||||||    
T  47989133 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgttattattt 47989064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 565
Target Start/End: Complemental strand, 47998420 - 47998351
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| |||||||| ||||||||||||| ||||||||||  ||||||  ||  ||||||||||||||||||    
T  47998420 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgttattattt 47998351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 565
Target Start/End: Complemental strand, 48007707 - 48007638
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| |||||||| ||||||||||||| ||||||||||  ||||||  ||  ||||||||||||||||||    
T  48007707 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgttattattt 48007638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3209902 - 3209865
Alignment:
Q  43 ttaatttt-ttaattttaaccatttgatctatttatca 79  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3209902 ttaattttgttaattttaaccatttgatctatttatca 3209865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 25179986 - 25180039
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||| ||||||||||||||| ||||||||||||  ||| |||||| ||||||    
T  25179986 aaataatttaagtgtgattgaaatattatatgatcacttaccatgttgttattt 25180039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 28529253 - 28529322
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || |||||||| ||||| | |||| ||||||||||| ||| |||||| || |||||||||||||    
T  28529253 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgta 28529322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 666
Target Start/End: Complemental strand, 28581285 - 28581184
Alignment:
Q  565 ttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattct 664  Q
    ||||||| ||||||||||||||| | | |  | |||||||||| ||||| ||||| || || ||| |||| || ||||||  |||||||||||||| |||    
T  28581285 ttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaacacactct 28581186  T
Q  665 ta 666  Q
    ||    
T  28581185 ta 28581184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 43657156 - 43657107
Alignment:
Q  107 tttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||||||||||| ||| ||||||  | |||||||||||||    
T  43657156 tttgagcactttctctagcactcactattttatttgatgaaatcaatgta 43657107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 46978508 - 46978565
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||| ||||||||||||| |||  ||||| |||||||| ||| |||||||||||    
T  46978508 atgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgtt 46978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 658
Target Start/End: Original strand, 220575 - 220635
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    |||||||||| |||||||||| ||| || ||| ||| ||||||||||  ||||||||||||    
T  220575 aatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaaca 220635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 658
Target Start/End: Complemental strand, 21773848 - 21773788
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    |||||| ||| |||||||| || ||||| ||| |||||||||||||| ||| |||||||||    
T  21773848 aatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 24253961 - 24253901
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||||||||| |||  ||||||||  | |||||||||||||||| |||||    
T  24253961 gtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaat 24253901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 599 - 659
Target Start/End: Original strand, 25499074 - 25499134
Alignment:
Q  599 atttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacac 659  Q
    ||||||||| ||||||||||| ||||| ||  | |||||| |||||| |||||||||||||    
T  25499074 atttaaaaaagaaaagtaaacccttccctctctccccctcttaaactctccatccaaacac 25499134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 34641229 - 34641169
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||||||||||  |||||||| || |  ||||||||||||| |||||    
T  34641229 gtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaat 34641169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 41110326 - 41110386
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||| |||||||||  ||||||||||| | |||||||||| ||| |||||    
T  41110326 gtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaat 41110386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 3e-59; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 425 - 645
Target Start/End: Complemental strand, 31348560 - 31348340
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| ||||||||||  |||||||| || | |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||||| ||    
T  31348560 gtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgt 31348461  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| ||| |||||||| |||||||||||| || |||||||||| ||||||||||| ||||    
T  31348460 gtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaacccttc 31348361  T
Q  625 catcctttcccctcctaaact 645  Q
    | ||| |||||||| ||||||    
T  31348360 cctcccttcccctcataaact 31348340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 54935072 - 54935309
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggag-atgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||||||||||||  |||||||| | | | |||||||||||||| ||||| || | ||||||||||||||||| ||||||||||||||    
T  54935072 gtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaattaag 54935171  T
Q  524 tgtgattgaattatt-atatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||||||||| |||| ||||||||||||||||| ||| |||  |||||| |||||| | |||||||||||| || |||||||||| ||||| ||||| ||    
T  54935172 tgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaaccct 54935271  T
Q  623 tccatcctttcccctcctaaactttccatccaaacaca 660  Q
     || ||| ||||||||||||||  ||||||||||||||    
T  54935272 cccctcccttcccctcctaaaccctccatccaaacaca 54935309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 426 - 656
Target Start/End: Complemental strand, 17938346 - 17938115
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttata-aaataaattaagt 524  Q
    |||||||||||||  |||||||||  |||||||  ||   |||||||||||||| ||||| |||| ||||||||||| ||||| |  |||||||||||||    
T  17938346 tgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagt 17938247  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || |||||||| ||| |||| ||| |  |||||||||||||||| ||||||||||    
T  17938246 gtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaactcttc 17938147  T
Q  625 catcctttcccctcctaaactttccatccaaa 656  Q
    | ||| ||||||||||||||  ||||||||||    
T  17938146 cctccattcccctcctaaaccctccatccaaa 17938115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 45741895 - 45742130
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  || | | | || ||||||||||| |||| ||||| ||   ||||||||| ||||||| ||||||||||||| |    
T  45741895 gtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaattaaat 45741994  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||| || |||||||||| |||||||||||||| |    
T  45741995 gtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaactctcc 45742094  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| || ||| |||||||  | ||||||||||||    
T  45742095 cctccctttcccgcctaaacccttcatccaaacaca 45742130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 27735750 - 27735985
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| ||||||||||||||  |||||| |||| | |||| ||||| ||| ||||| ||   ||||||||||||||||| |||||||||||||||    
T  27735750 gtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagt 27735849  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||||||| |||||||||||| |||  |||||  |||||||| |||| ||||||| || |||||||||| ||||| | ||| ||      
T  27735850 gtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctat 27735949  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  27735950 cctcccttcccctcctaaaccctccatccaaacaca 27735985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 429 - 611
Target Start/End: Original strand, 16400809 - 16400991
Alignment:
Q  429 ttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtga 528  Q
    |||||||||||||||||||||| |||||||| || |||| |||||| |||| || |  |||| ||||| ||||||||||| ||||||||||||| | |||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaattaattatga 16400908  T
Q  529 ttgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaa 611  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||||||||| |  ||||||||||||||    
T  16400909 ttgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaacgaa 16400991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 433 - 650
Target Start/End: Original strand, 6891373 - 6891590
Alignment:
Q  433 attgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattga 532  Q
    ||||||||||||| |||  ||| |||| |||  |||| ||||||||| ||||  ||||  |||||||||||||||| |||||||||||||||||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattga 6891472  T
Q  533 attattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatccttt 632  Q
    | |||||||||||||||||| ||||||||||||||| || || ||||| | |||||||||| |  ||||||||||||||||  ||||||| || ||  ||    
T  6891473 agtattatatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaatcaaactctcccctctctt 6891572  T
Q  633 cccctcctaaactttcca 650  Q
    ||||||||||||| ||||    
T  6891573 cccctcctaaactatcca 6891590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 54320440 - 54320674
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||||| ||||||||| || | |||  ||||||||| ||||| ||   ||||||| ||||||||| |||||||||||||||    
T  54320440 gtgtttggattgagggtttaggagggaaagggagg-gagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagt 54320538  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||| | ||||||||||| ||||||||||||| |||  |||||| ||||||||  ||||||||||| || ||||||||||  ||||  |||| || |    
T  54320539 gtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaatcaaaccctcc 54320638  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  || |||||||||||    
T  54320639 cctcccttcccctcctaaaccctcaatccaaacaca 54320674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 425 - 625
Target Start/End: Complemental strand, 47433948 - 47433748
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctata-taacatgtttttataaaataaattaag 523  Q
    |||||||| |||| |||||||||||  |||||||  || | |||||||||||||| ||||| |||  ||||| |||||||||||| ||||||||||||||    
T  47433948 gtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaattaag 47433849  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| || |||||||| ||| |||| ||| |  |||||||||||||||| ||||| |||    
T  47433848 tgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaaccctt 47433750  T
Q  624 cc 625  Q
    ||    
T  47433749 cc 47433748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 464 - 635
Target Start/End: Original strand, 44784036 - 44784206
Alignment:
Q  464 gatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattat 563  Q
    |||||||||||||||| ||||| |||  | |||||||| |||||| |||| ||||||||||||||||||| |||||||||||||||||| | |||| |||    
T  44784036 gatttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatat 44784135  T
Q  564 tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttccc 635  Q
     ||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  44784136 gttaacgt-ttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaagtaaactcttccctcccttccc 44784206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 580
Target Start/End: Complemental strand, 46007940 - 46007785
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||||||||||||| |||||  ||  ||||||||| ||||||| |||||||||||||||    
T  46007940 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaagt 46007841  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaa 580  Q
    | ||||||| |||||||||||| |||||||||||| ||| ||||||| ||||||||    
T  46007840 gagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaa 46007785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 425 - 593
Target Start/End: Original strand, 26166942 - 26167110
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  || ||||| ||   |||  ||||||||| ||||| |||  ||||||||||||||| | |||||||||||||||    
T  26166942 gtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaattaagt 26167041  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||  | |||||| |||||| |||||    
T  26167042 gtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgt 26167110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 436 - 660
Target Start/End: Complemental strand, 49735695 - 49735472
Alignment:
Q  436 gagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaatt 535  Q
    ||||||||||||||  |||||||| || | |||| ||||||||| ||||  ||   ||||||||||||||||| |||||||||| ||||||||| ||| |    
T  49735695 gagggtttaggaggggaagggaggggagg-tttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaat 49735597  T
Q  536 attatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttccc 635  Q
    ||||||| |||||||||||||||| ||  ||||||| |||||| | |||||||  ||| || |||||||||| ||||||| ||| || || ||| |||||    
T  49735596 attatattatcgtttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttccc 49735497  T
Q  636 ctcctaaactttccatccaaacaca 660  Q
    |||||||||  || |||||||||||    
T  49735496 ctcctaaaccctcaatccaaacaca 49735472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 464 - 635
Target Start/End: Original strand, 28332848 - 28333019
Alignment:
Q  464 gatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattat 563  Q
    |||||||||||||||| ||||| |||  |||||||||| |||||| |||| |||||||||| |||||||| ||||||||||||||||| || |||| |||    
T  28332848 gatttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatat 28332947  T
Q  564 tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttccc 635  Q
      |||  | ||| |||||||||| ||||||| | ||||||||||| |||||||||||||||| ||| |||||    
T  28332948 gctaatgttttagaaaatatttcgtagtgttggtaatttaaaaacaaaaagtaaactcttccctcccttccc 28333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 492 - 618
Target Start/End: Original strand, 36151648 - 36151773
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||  ||||  ||||    
T  36151648 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactt-ttaaaaatcattttctagt 36151746  T
Q  592 gttcgcaatttaaaaacgaaaagtaaa 618  Q
    ||||  |||||||||| ||||||||||    
T  36151747 gttcataatttaaaaatgaaaagtaaa 36151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 5731002 - 5730834
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||| | ||||||||||||||||| |||||| |||||||||||| |||||||||||| ||| ||||||  | ||||||||||| ||||     
T  5731002 ctatataacatgtttctctaaaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagg 5730903  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || || |||||||||| ||||  ||||| || |||||  || |||||||||||  ||||||||||||||    
T  5730902 gtccgtaatttaaaaatgaaatctaaaccctcccatctctttccctcctaaaccctccatccaaacaca 5730834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 571
Target Start/End: Complemental strand, 1968598 - 1968452
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatga-tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||||||||||||  |||||||| || || |||| ||||| ||| ||||| ||   |||||||| |||||||| |||||||||| | |    
T  1968598 gtgtttggattgagggtttaggaggggaagggagg-gaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaatcagg 1968500  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaactt 571  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  1968499 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactt 1968452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 661
Target Start/End: Original strand, 29798293 - 29798522
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||||||||  ||| |||  |||  ||||||||| |||| ||||| |||  ||||||||||||||||| |    ||||| ||||    
T  29798293 gtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttct----taaatcaagt 29798388  T
Q  525 gtgattgaattattatatgatcgtttatcatg-ttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||||||||| |||||||||||||||||| ||| |||  || |||| || |||||||| |||||||||||| || |||||||||| ||||| | ||| ||     
T  29798389 gtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaaccctc 29798488  T
Q  624 ccatcctttcccctcctaaactttccatccaaacacat 661  Q
    ||||  ||    |||||||||| |||||||||||||||    
T  29798489 ccattttt----ctcctaaactctccatccaaacacat 29798522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 579
Target Start/End: Complemental strand, 45132734 - 45132586
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||| |||||| ||||||||||  ||| ||||||||| |||||||||||||| ||||| ||   |||||||| ||||      ||||||||||||||    
T  45132734 gtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaagt 45132641  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaa 579  Q
    ||||||||| ||||||||||||||||||||| ||| ||| ||||||| |||||||    
T  45132640 gtgattgaagtattatatgatcgtttatcattttaatatgttaactttttaaaaa 45132586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 425 - 567
Target Start/End: Original strand, 37711143 - 37711290
Alignment:
Q  425 gtgtttggattgagggtttaggagg--aa---aagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaat 519  Q
    |||||||||||||||||||||||||  ||   |||||||| || | |||  ||||||||| ||||| ||   ||||||||||||||| | ||||||||||    
T  37711143 gtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataaat 37711242  T
Q  520 taagtgtgattgaattattatatgatcgtttatcatgttattatttta 567  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  37711243 taagtgtgattgaagtattatatgatcatttatcatgttaatatttta 37711290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 561
Target Start/End: Original strand, 22920986 - 22921123
Alignment:
Q  425 gtgtttggattgagggtttaggagg--aaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||| |||||||||||  ||||| |||||||  |||||| |||||||| ||||| |||| ||| ||||||||||||| || ||||||| ||    
T  22920986 gtgtttggattgatggtttaggagggaaaaagagaggaga--atttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaa 22921083  T
Q  523 -gtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
     ||||||||||| ||||||||||||||||||||| |||||    
T  22921084 agtgtgattgaagtattatatgatcgtttatcatattatt 22921123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 22970813 - 22970676
Alignment:
Q  425 gtgtttggattgagggtttaggagg--aaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||| |||||||||||  ||||| |||||||  |||||| |||||||| ||||| |||| ||| ||||||||||||| || ||||||| ||    
T  22970813 gtgtttggattgatggtttaggagggaaaaagagaggaga--atttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaa 22970716  T
Q  523 -gtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
     ||||||||||| ||||||||||||||||||||| |||||    
T  22970715 agtgtgattgaagtattatatgatcgtttatcatattatt 22970676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 492 - 656
Target Start/End: Original strand, 35248758 - 35248922
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||||||| ||  ||||||| | ||||||||||    |||    
T  35248758 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaacttttaaaaaaatattcttgagt 35248857  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaa 656  Q
    || |  |||||||||  ||||||||||| || || ||| | || |||||||||  ||||||||||    
T  35248858 gtccataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 41174417 - 41174585
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||| ||||||||| |||||||||| || |||||||||  |||||||||||| ||||| |||||| |||  |||||| |||||||  ||||||||||    
T  41174417 ctatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactttttaaaaaccatttcatagt 41174516  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || |  || ||||||| ||||| |||||  | || ||| ||||||||||||||  ||||||||||||||    
T  41174517 gtccctaaattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacaca 41174585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 659
Target Start/End: Original strand, 55510174 - 55510407
Alignment:
Q  425 gtgtttggattgagggtttagg-aggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||| ||||| ||| || |||||| || || ||||||||| ||| ||| | | |  | || ||| |||||||| ||||||||||||||    
T  55510174 gtgtttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaag 55510273  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||||| |||| |||||||||||| || |||||||| |||||| || || ||  ||||||||| |||||||||| ||||||||||  |||||||||| ||     
T  55510274 tgtgactgaagtattatatgatcattcatcatgttgttatttcaa-tttttttaaaatattttatagtgttcgtaatttaaaaa-taaaagtaaaccctc 55510371  T
Q  624 ccatcctttcccctcctaaactttccatccaaacac 659  Q
     |||   || ||||| |||||| |||||||||||||    
T  55510372 acatttctttccctcttaaactctccatccaaacac 55510407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 617
Target Start/End: Original strand, 55080584 - 55080776
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||||   ||| ||||||||| || | |||| |||| ||||| || | | || ||| ||||||||  ||||||| ||||||    
T  55080584 gtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagttaagt 55080683  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    ||  ||||| |||| ||||||| ||||||||||| ||| || || ||  |||||| ||||| ||| |||||| |||||||||| |||||||||    
T  55080684 gtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaa 55080776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 513 - 644
Target Start/End: Complemental strand, 21695040 - 21694910
Alignment:
Q  513 aataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaa 612  Q
    ||||||||||||||||||||| |||||||||||| || ||||| || |||||| || ||||||||||  |||| ||||||| || |||||||||| ||||    
T  21695040 aataaattaagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaa 21694942  T
Q  613 agtaaactcttccatcctttcccctcctaaac 644  Q
    ||||| | || || ||| ||||||||||||||    
T  21694941 agtaagccctcccgtcccttcccctcctaaac 21694910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 559
Target Start/End: Original strand, 56135754 - 56135888
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | || | |||| |||| ||||| || | | || ||| |||||||| |||||||||||||||    
T  56135754 gtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagt 56135853  T
Q  525 gtgattgaattattatatgatcgtttatcatgtta 559  Q
    ||  ||||| |||||||||||| ||||||||||||    
T  56135854 gtttttgaagtattatatgatcatttatcatgtta 56135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 42862591 - 42862532
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42862591 aacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgta 42862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 425 - 622
Target Start/End: Complemental strand, 47846295 - 47846097
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttat-aaaataaattaag 523  Q
    |||||||||||||||||||| ||||| |||||| | || | ||||||||| |||| ||||| |  | | || |||  ||||||| | |||||||||||||    
T  47846295 gtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaattaag 47846196  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||  ||||| |||||||||||  ||||||||||| ||| || || ||  |||||| ||||| ||| ||| |  |||||||||| ||||||||||||||    
T  47846195 tgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaaactct 47846097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 436 - 660
Target Start/End: Complemental strand, 24565572 - 24565350
Alignment:
Q  436 gagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaatt 535  Q
    ||||||||||||||  ||||||||  |  |||||| |||||||| ||||| ||   ||||||||||||||||| || |||||  | || ||||||||| |    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagt 24565475  T
Q  536 attatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttccc 635  Q
    |||||||| | |||||||| |||| ||  ||||||| |||||||  ||||| || | | || |||||||||| ||||||||||| || ||     |||||    
T  24565474 attatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccccagtcttccc 24565375  T
Q  636 ctcctaaactttccatccaaacaca 660  Q
     |||||||| |||||||||||||||    
T  24565374 ttcctaaaccttccatccaaacaca 24565350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 34110803 - 34111003
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatg--------tttttataaaata 516  Q
    |||||||||||||||||||||||||  ||| |||| |||| || | || || ||| ||||| |||| |||||||||||         ||||| | |||||    
T  34110803 gtgtttggattgagggtttaggaggggaagagaggggatg-ttaatttctcatttttaaattacaaactatataacataacatgtttttttttttaaata 34110901  T
Q  517 aattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagta 616  Q
    || |||||||| || || ||||||||||||||||||||||||| ||| ||||||| |||||||| |||||| |||  ||| ||||||||||  |||||||    
T  34110902 aagtaagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagt-atcgtaatttaaaaataaaaagta 34111000  T
Q  617 aac 619  Q
    |||    
T  34111001 aac 34111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 613
Target Start/End: Complemental strand, 2248040 - 2247854
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||| ||| || | ||   |||||||||||||| ||||| || |  |||||||||||||||| ||||| ||| || ||    
T  2248040 gtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattac-agatatataacatgtttttctaaaa-aaaatatgt 2247943  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    ||||||||| |||||||| || ||||||||| ||| ||  ||||  | |||| ||| |||| ||| ||| || |||||||||| |||||    
T  2247942 gtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaa 2247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 51206217 - 51206133
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaac 180  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||  || |||| ||| ||||||||||    
T  51206217 caacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaac 51206133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 492 - 559
Target Start/End: Complemental strand, 2917135 - 2917068
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtta 559  Q
    |||||||||||| |||| ||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  2917135 ctatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgtta 2917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 44832646 - 44832577
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| |||| |||||| | |||||||| ||||||||||||||||    
T  44832646 gaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgta 44832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 39016845 - 39016777
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||| ||||||  ||| |||||||||||    
T  39016845 aatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgta 39016777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 555
Target Start/End: Complemental strand, 17182724 - 17182594
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| ||||  || ||| | || || |||||||| |||| ||||| || | | |  ||| || ||||| |||||||||||||||    
T  17182724 gtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataaattaagt 17182625  T
Q  525 gtgattgaattattatatgatcgtttatcat 555  Q
    ||  ||||| |||||||||||| ||||||||    
T  17182624 gtttttgaagtattatatgatcatttatcat 17182594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 37315748 - 37315650
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaac 180  Q
    |||| ||||| || ||||||||| ||||||||||| ||  ||||||| ||| |||||| ||||||||||||||||  || ||| |||| ||||||||||    
T  37315748 aagatgaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaac 37315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 660
Target Start/End: Complemental strand, 37761555 - 37761469
Alignment:
Q  574 taaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||||| ||  |||||| ||||||||||  |||||| |||||| || ||||||| ||||||||||| || |||||||||||    
T  37761555 taaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaaacaca 37761469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 42862418 - 42862484
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    ||||| || ||||||||||||||||||||| | ||||||||| ||| |||||| |||||||||||||    
T  42862418 gaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaat 42862484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 43961491 - 43961548
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||| |||||||||||||||||  ||||| |||||||||||| |||||||||||    
T  43961491 atgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 43961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 495 - 558
Target Start/End: Complemental strand, 18516640 - 18516577
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| ||||||||| ||||| |||||||||||||||||  ||||| ||||| |||||||||||    
T  18516640 tataaaatgtttttaaaaaatgaattaagtgtgattgaagcattatgtgatcatttatcatgtt 18516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 428 - 615
Target Start/End: Original strand, 22186727 - 22186914
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    |||||||||||||||||||| |  ||||||||  |   || ||||||  ||| ||||| |||| | |  ||| |||||||| |||||||||| ||||||     
T  22186727 tttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataaataaagtgtt 22186826  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
     ||||| |||||||| ||| ||||||||||| ||| || || ||  ||||||  |||| ||| ||| || |||||||||| |||||||    
T  22186827 tttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagt 22186914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 1968537 - 1968599
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| ||||| ||||||||||| ||| ||||||||||||||  || |||||||||||    
T  1968537 aatttaaaaatgaaaattaaactcttccctcccttcccctcctaaaccctcaatccaaacaca 1968599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 14539357 - 14539455
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    |||| |||||||||||||||||  ||||| |||||||||||| ||||| ||||| ||| ||||| ||  ||| ||| |||| ||| |||||| ||||||    
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgttcgtaattta 14539455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 47237921 - 47237855
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    ||||| ||||||||||||||||||| |||| ||||||||| | ||| |||||| || ||||||||||    
T  47237921 gaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaat 47237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 2187805 - 2187902
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaa 178  Q
    ||||| ||||| || |||||||| |||||||||||| |||||| |||| | |||||||| | |||||| ||||||   || |||||||| ||||||||    
T  2187805 taagacgaatgctagcaacactcgcttttgagcactctctctaacactcatttttttattgtgtgaaaacaatgtgggacctacactttgaaaatgaa 2187902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 660
Target Start/End: Original strand, 6938394 - 6938487
Alignment:
Q  567 aacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||| |||||||| |||| ||| | | || |||||||||| ||||||| ||| || || ||| |||||||| ||||| |||||||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacaca 6938487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 13070114 - 13070029
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||||| || |||||||| |||| ||| |||||| | || |||||||||||  || |||||||| |||||| ||||    
T  13070114 caacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacc 13070029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 660
Target Start/End: Original strand, 31348500 - 31348561
Alignment:
Q  599 atttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||| ||||||||||| || || ||| ||||||||||||||| || |||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacaca 31348561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 40812046 - 40812103
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    ||||||||| |||||| |||| ||||||||||| ||| |||||| |||||||||||||    
T  40812046 caacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 561
Target Start/End: Original strand, 41227576 - 41227621
Alignment:
Q  516 aaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  41227576 aaattaagtgtgattgaagtattatatgatcatttatcacgttatt 41227621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 4437430 - 4437490
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||||||||||| | ||||||||| ||||| ||| ||||||||| |||||    
T  4437430 gtgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaat 4437490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 8108965 - 8109025
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| ||||| | |||| ||||||||||| ||| |||||| ||||||||||||||||    
T  8108965 caacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgta 8109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 660
Target Start/End: Original strand, 46007877 - 46007941
Alignment:
Q  596 gcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||||| ||||||||||| || || ||| ||||||||||||||  || |||||||||||    
T  46007877 gcaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 46007941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 531
Target Start/End: Complemental strand, 31720028 - 31719966
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgt--ttttataaaataaattaagtgtgattg 531  Q
    ||||||||| ||||| |||| |||||||||||||  |||| | ||||||||||||||||||||    
T  31720028 ttttcttttttaaattacaaactatataacatgttttttttttaaataaattaagtgtgattg 31719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 2187992 - 2187926
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatg 154  Q
    |||||||  |||||||||||||||||||| ||||||||  |  || |||||| ||||||||||||||    
T  2187992 aatgttaggaacactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatg 2187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 21837459 - 21837389
Alignment:
Q  280 tttaatctaaaagtcaaaattaatggtacaccgatgagagacttagttaaaccctcatcctataatccacc 350  Q
    ||||||||||| || ||||||| ||||| |||| |||| |||||||||  ||||||| |||| ||||||||    
T  21837459 tttaatctaaaggttaaaattagtggtaaaccggtgagggacttagttggaccctcaccctagaatccacc 21837389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 37315572 - 37315629
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||   ||||||||||||||||    
T  37315572 caacactctcttttgagcactctctctaacactcactctttt---gggtgaaatcaatgta 37315629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 50571859 - 50571933
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||| |||||||| ||||| || ||||| | |||| ||||||||||||||| ||||||  | |||||||||||||    
T  50571859 aagaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgta 50571933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 551
Target Start/End: Original strand, 54494723 - 54494769
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgttta 551  Q
    |||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  54494723 ttttttaaaataagttaagtgtgattgaagtattatatgattgttta 54494769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 30867096 - 30867043
Alignment:
Q  103 ctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||| ||||||||||| |||||||||| || | |||| ||||||    
T  30867096 ctcttttgagcactatctctagcactcacttttttattggattaaattaatgta 30867043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 34438584 - 34438617
Alignment:
Q  43 ttaattttttaattttaaccatttgatctattta 76  Q
    ||||||||||||||| ||||||||||||||||||    
T  34438584 ttaattttttaatttcaaccatttgatctattta 34438617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 34995132 - 34995189
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||| |||||||||||||||||  ||||| ||||||| |||  |||||||||||    
T  34995132 atgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgtt 34995189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 587 - 660
Target Start/End: Original strand, 37711290 - 37711363
Alignment:
Q  587 atagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||| || |||||||||| ||||  ||||| || || ||| ||||||||||||||  ||||||||||||||    
T  37711290 atagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacaca 37711363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 44832463 - 44832532
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||| ||||||||||||| | | |||| |||| |||||||||| ||||||||| ||||||    
T  44832463 gaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgta 44832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 6448086 - 6448030
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||| |||||||||| ||||||||||||| |||||| |||| || |||| |||||||    
T  6448086 ttttttaaaataaataaagtgtgattgaaatattatctgatggtctatcgtgttatt 6448030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 13069954 - 13070009
Alignment:
Q  100 actctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||  ||||||||||| ||| ||||||  |||||||||||||||    
T  13069954 actctcttttgagcacactctctagcactcactcttttat-tggtgaaatcaatgta 13070009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 512 - 548
Target Start/End: Complemental strand, 23332686 - 23332650
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgt 548  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  23332686 aaataaattaagtgtgatagaagtattatatgatcgt 23332650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 512 - 556
Target Start/End: Complemental strand, 33224989 - 33224945
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatg 556  Q
    |||| ||||||||| |||||||||||||||||| | |||||||||    
T  33224989 aaatcaattaagtgcgattgaattattatatgaccatttatcatg 33224945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 504 - 560
Target Start/End: Complemental strand, 34108386 - 34108330
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttat 560  Q
    |||||| |||||||||||||| |||||||| |||||||  ||  |||||||||||||    
T  34108386 tttttaaaaaataaattaagtatgattgaagtattatacaataatttatcatgttat 34108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 43771123 - 43771195
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| || |||||||| ||||||| |||| ||||||  ||| ||| |||||| || |||||||||||||    
T  43771123 gaagaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgta 43771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 49735473 - 49735533
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||||||||||||  |||||||| || | || ||||||| ||| |||||    
T  49735473 gtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaat 49735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 512 - 660
Target Start/End: Complemental strand, 54576479 - 54576331
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaa 611  Q
    ||||||||||| |||  ||||| |||||||| ||| ||||||| ||| ||| || || ||  || |||  |||| ||| ||| || ||| |||||| |||    
T  54576479 aaataaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaa 54576380  T
Q  612 aagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||| | || || ||| ||||||| ||||||  ||||||||||||||    
T  54576379 aagtaagccctcccctcccttccccttctaaaccctccatccaaacaca 54576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 3e-59; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 466 - 666
Target Start/End: Original strand, 8529845 - 8530045
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |    
T  8529845 tttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgttaatatgt 8529944  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattctt 665  Q
    |||||| ||||||||||||||||||||| || |||||||||| |||||||||||| |  | ||| ||||||||||||||| | ||||||||||||| |||    
T  8529945 taactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatccaaacacatcctt 8530044  T
Q  666 a 666  Q
    |    
T  8530045 a 8530045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 40095173 - 40094937
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaag 523  Q
    ||||||||||||||||||||| ||||||||||| |  | | |||||||||| ||| ||||| |||  |||||||||||||||||  ||||||||||||||    
T  40095173 gtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaattaag 40095074  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    |||||||||| ||||||||||||||||||||||||| | | ||||||| ||| |||| |||||||||||| || |||||||||| ||||||||||| ||     
T  40095073 tgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctc 40094974  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || | | ||||||||||||||  ||||||||||||||    
T  40094973 cccttccttcccctcctaaaccctccatccaaacaca 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 30010337 - 30010572
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || |||||||||||||| | ||||| ||   ||||||||||||||||| |||||||||||||||    
T  30010337 gtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaattaagt 30010436  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||| ||||| |||||||||||||||||| |||||| ||| ||||||  |||||||| ||||| |||||| || ||||| |||| ||||||||||| || |    
T  30010437 gtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccctcc 30010536  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||| ||||||  ||||||||||||||    
T  30010537 cctcccttccccttctaaaccctccatccaaacaca 30010572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 41498409 - 41498645
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||| |||| || | |||||||||| ||| ||||| |  | |||| ||||||| |||| ||  |||| ||||||    
T  41498409 gtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagttaagt 41498508  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||||||||| || |||||||||| ||||||||||  || |    
T  41498509 gtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaatcctcc 41498608  T
Q  625 cat-cctttcccctcctaaactttccatccaaacaca 660  Q
    | | |||| ||||||||||||| ||||||||||||||    
T  41498609 cctcccttacccctcctaaactctccatccaaacaca 41498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 427 - 660
Target Start/End: Complemental strand, 2859169 - 2858936
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgt 526  Q
    ||||||||||| |||||||||||  |||||||| || | ||||||||| |||| ||||| ||   |||||||||||||||||  ||||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgt 2859070  T
Q  527 gattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcca 626  Q
    ||||||| ||||||||||| |||||| |||| | ||| ||||||| ||||| || ||||||||| ||  | |||||| ||| ||||||||||| || ||     
T  2859069 gattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctcccc 2858970  T
Q  627 tcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| || |||||||||||  ||||||||||||||    
T  2858969 tccctttccctcctaaaccctccatccaaacaca 2858936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 425 - 618
Target Start/End: Original strand, 51597673 - 51597866
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| ||    |||||||| ||   |||||||||||||| ||||||||   ||||||||||||||||| |||||||||||||||    
T  51597673 gtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagt 51597772  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    ||||||||| ||||||||||| ||||||||| ||| ||| ||||||| |||||||  ||||||||||||||  |||||||||  ||||||||||    
T  51597773 gtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaagtaaa 51597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 38510133 - 38509898
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||| |||||||||||||  |||||||| || | |||| ||||||||| ||||  ||   ||||||||||||||||| |||||||||| ||||    
T  38510133 gtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagt 38510034  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||| |||||||||| |||||  || |||| || |||||| | |||||||||||| || |||||||||| ||||||| ||| || |    
T  38510033 gtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcc 38509934  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
      ||| ||||||||||||||  || |||||||||||    
T  38509933 tctcccttcccctcctaaaccctctatccaaacaca 38509898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 12234015 - 12234250
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||||||||  | |  ||| ||||||||| ||||| ||   ||||||||||||||||| |||||||||| ||||    
T  12234015 gtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 12234114  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||  ||| |||||||| | ||| |||||| |||  ||||||  ||||||| ||||| |||||| || |||||||||| ||||| ||||| || |    
T  12234115 gtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccctcc 12234214  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  12234215 cctcccttcccctcctaaaccctccatccaaacaca 12234250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 425 - 616
Target Start/End: Complemental strand, 32951557 - 32951366
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| |||||||||   |||||||| ||   |||||||||| ||| ||||| ||   ||||| ||||||||||| |||||||||||||||    
T  32951557 gtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaattaagt 32951458  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagta 616  Q
    ||||||||| ||||||| ||||||||||||||||| ||| ||||||| ||| |||| ||||||| |||| || |||||||||| ||||||||    
T  32951457 gtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaagta 32951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 425 - 607
Target Start/End: Complemental strand, 49946827 - 49946645
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||| ||||| ||  |||||| | || | |||||||||||| | |||| || |  ||||||||||||||||| ||||||||||||| |    
T  49946827 gtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaat 49946728  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaa 607  Q
    ||||||||| |||||||||||  |||||||||||| ||| ||||||| | ||||||||||| ||||||| || ||||||||||    
T  49946727 gtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaa 49946645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 455 - 619
Target Start/End: Complemental strand, 44211114 - 44210952
Alignment:
Q  455 ggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatca 554  Q
    ||||| || ||||||| |||||||| ||||| ||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  44211114 ggaggggaagatttacatttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatca 44211015  T
Q  555 tgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||| ||||||||| || ||| | || |||||||   || |  ||||||||||||||||||||||    
T  44211014 tgttgttattttaattttttagagaacatttcat--ggtccataatttaaaaacgaaaagtaaac 44210952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 619
Target Start/End: Original strand, 6563628 - 6563775
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| |||  ||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||    
T  6563628 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 6563726  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    | |||||||||| |||||||||| | | ||||||||| |||||||||||    
T  6563727 tcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 6563775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 428 - 660
Target Start/End: Original strand, 10391880 - 10392108
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    |||||||||||| |||||||||  ||  |||| || | |||||||||| ||| ||||| ||   |||||| |||||||||| ||||||||||||| ||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtg 10391979  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttatt-aaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcca 626  Q
    ||| || |||||||||| |||||||||||||| ||| ||||||| || |||||| |||| ||| |||| | |||||||||||||||||||||||||        
T  10391980 attaaagtattatatgaccgtttatcatgttaatatgttaactttttaaaaaaacatttaataatgtttgtaatttaaaaacgaaaagtaaactct---c 10392076  T
Q  627 tcctttcccctcctaaactttccatccaaacaca 660  Q
    |||  |||||||||||||  ||||||||||||||    
T  10392077 tcc--tcccctcctaaaccctccatccaaacaca 10392108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 36285741 - 36285631
Alignment:
Q  497 taacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcg 596  Q
    |||||||||||| ||||||| || ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||    
T  36285741 taacatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcg 36285642  T
Q  597 caatttaaaaa 607  Q
     ||||||||||    
T  36285641 taatttaaaaa 36285631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 35349701 - 35349470
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||| |||||||| ||||  |||||||| || | |||||||||| ||| ||||| ||   ||||||||||| ||||| ||||||||| ||||     
T  35349701 gtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaactaagg 35349602  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    || |||||| ||||||||||| ||||||||||||| ||| ||||||| ||| |||| |||||  ||||| || |||||||||| ||||||||||| || |    
T  35349601 gttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaaaccctcc 35349504  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    |  ||  ||||||| |||||  ||||||||||||||    
T  35349503 c--cccctcccctcttaaaccctccatccaaacaca 35349470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 471 - 612
Target Start/End: Complemental strand, 50744474 - 50744332
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| ||   |||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  50744474 ttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact 50744375  T
Q  571 -tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaa 612  Q
     | | |||||| |||||||||||| || |||||||||| ||||    
T  50744374 ctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 1085729 - 1085493
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| ||||||||||||||  |||||||||||||| | |||||| |||| ||||| || | | || ||| |||||||| |||||||||||||||    
T  1085729 gtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaattaagt 1085630  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattt-aaaaacgaaaagtaaactctt 623  Q
    ||  ||||| |||||||||||| ||||||||| | ||| || || ||  ||||||  ||||  || ||| || ||||| ||||| |||||||||   ||     
T  1085629 gtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagtaagtcctc 1085530  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || ||| | ||||||||||||  ||||||||||||||    
T  1085529 ccctccatccccctcctaaaccctccatccaaacaca 1085493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 666
Target Start/End: Original strand, 7444574 - 7444741
Alignment:
Q  499 acatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgca 598  Q
    |||||||||| |||| ||||  ||||||||||||| |||||||||||||||||| |||||| ||| ||||||| |||||||  |||| ||||||| || |    
T  7444574 acatgtttttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgta 7444673  T
Q  599 atttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattctta 666  Q
    |||| |||| ||||| ||||| || || ||  ||||| | ||||||| | |||||||||||| |||||    
T  7444674 attttaaaatgaaaactaaaccctcccctctcttccctttctaaactcttcatccaaacacactctta 7444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 492 - 591
Target Start/End: Complemental strand, 45585857 - 45585758
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||||||||| ||| ||||||| | |||||| |||| |||||    
T  45585857 ctatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatgttaacttttaaaaaaacattttatagt 45585758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 593
Target Start/End: Original strand, 42230615 - 42230711
Alignment:
Q  497 taacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||  ||||||| |||| |||||||    
T  42230615 taacatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagtgt 42230711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 526 - 660
Target Start/End: Complemental strand, 20576269 - 20576137
Alignment:
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcc 625  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||  |||||||| |||||  ||||| || |||||||||| ||||  |||||||| ||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttc--agtgtccgtaatttaaaaatgaaatctaaactctccc 20576172  T
Q  626 atcctttcccctcctaaactttccatccaaacaca 660  Q
     ||| ||||||||||||||  || |||||||||||    
T  20576171 ctcccttcccctcctaaaccctctatccaaacaca 20576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 504 - 619
Target Start/End: Original strand, 41676363 - 41676480
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaactt--attaaaaaatatttcatagtgttcgcaatt 601  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||| ||  |  |||||| |||| ||||||| || ||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  602 taaaaacgaaaagtaaac 619  Q
    |||||| |||||||||||    
T  41676463 taaaaatgaaaagtaaac 41676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 41095606 - 41095700
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || ||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||  || |||||||| |||||| ||||    
T  41095606 gaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacc 41095700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 32848589 - 32848669
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatg 176  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||  || |||||||| ||||||    
T  32848589 caacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacactttgaaaatg 32848669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 593
Target Start/End: Complemental strand, 26941012 - 26940914
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||||||  |||||  |||||| ||  ||||||| | || ||||||||||||||||    
T  26941012 tataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgt 26940914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 41917990 - 41918064
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||| || ||||||||||||||||||||  ||||||||||| ||| |||||| ||||||||||||||||    
T  41917990 aagaagaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgta 41918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 11135739 - 11135808
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  11135739 gaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgta 11135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 28109874 - 28109935
Alignment:
Q  93 tatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatg 154  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28109874 tatcaacattatcttttgagcactttctctagcactcacttttttattgggtgaaatcaatg 28109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 13388334 - 13388428
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || ||||||||||||||||  ||| |||||| |||| |||||||||| || |||||||||||||  || |||||||| |||||||||||    
T  13388334 gaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgtagtacctacactttgaaaatgaaacc 13388428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 11135913 - 11135840
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||| ||||||||||||||||  || ||||||||    
T  11135913 caacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacacttt 11135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 11430441 - 11430510
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| | ||||||||| ||| |||||| ||||||||||||||||    
T  11430441 gaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgta 11430510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 562
Target Start/End: Original strand, 33643273 - 33643410
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||| |||||| |||||||||||  |||||| | ||||| | |||||| |||| ||||| || |   || ||| |||||||| |||||||||||||||    
T  33643273 gtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaattaagt 33643372  T
Q  525 gtgattgaattattatatgatcgtttatcatgttatta 562  Q
    ||  ||||| |||||||||||| || ||||| ||||||    
T  33643373 gtttttgaagtattatatgatcattcatcatattatta 33643410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 41095780 - 41095720
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| ||||||||||| |||  ||||| ||||||||||||||||    
T  41095780 caacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 41095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 547 - 660
Target Start/End: Complemental strand, 43552109 - 43552000
Alignment:
Q  547 gtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactt 646  Q
    ||||||||||||| ||| ||||||| |||||||| ||||||||  ||    |||||||||| ||||| ||||| ||  ||||||||| || ||||||| |    
T  43552109 gtttatcatgttaatatgttaactttttaaaaaacatttcataacgt----aatttaaaaatgaaaaataaaccctcacatcctttcgccgcctaaacct 43552014  T
Q  647 tccatccaaacaca 660  Q
    ||||||||||||||    
T  43552013 tccatccaaacaca 43552000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 32951496 - 32951558
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||||||||||||||||||| || ||| |||| |||||||||| || |||||||||||    
T  32951496 aatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacaca 32951558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 32848763 - 32848694
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || |||||||||||||||| |||| ||||||||||| ||| |||||| ||||||||||| ||||    
T  32848763 gaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgta 32848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 2858937 - 2858997
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||||||||||||| ||||||||| || | |||||||||| |||||||||    
T  2858937 gtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaat 2858997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 466 - 660
Target Start/End: Complemental strand, 2470933 - 2470734
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaat----tattatatgatcgtttatcatgttatt 561  Q
    |||||||||||||| ||||| |  | ||||||||||||||||| ||||||| | ||| ||||||||||     ||||||||||  ||||||||||||| |    
T  2470933 tttacttttcttttttaaattatcaactatataacatgtttttctaaaatacactaattgtgattgaaggaagtattatatgactgtttatcatgttaat 2470834  T
Q  562 ----attttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcct-ttcccctcctaaactttccatccaaa 656  Q
        |||||||   |  |||||| |||| |||||||||| |||||||||| | |||  |||| | ||||| || ||||||||||||||  ||||||||||    
T  2470833 atgcattttaa---aaaaaaaaacattttatagtgttcgtaatttaaaaatgtaaacgaaac-cctccattctcttcccctcctaaaccctccatccaaa 2470738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 11430628 - 11430542
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    |||| ||||| || ||||||||||||||||||||| ||||||||||| ||| ||||||  |||||| ||||||||  || ||||||||    
T  11430628 aagaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttat-tggtgaattcaatgtaggacctacacttt 11430542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 662
Target Start/End: Original strand, 35512912 - 35513039
Alignment:
Q  535 tattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcc 634  Q
    |||||||||||| ||||||||||| ||| || || ||  ||||||  |||| ||| ||| |  ||||||||||  |||||||| | || || ||| ||||    
T  35512912 tattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctcccctcccttcc 35513011  T
Q  635 cctcctaaactttccatccaaacacatt 662  Q
    ||||||||||  ||||||||||||||||    
T  35513012 cctcctaaaccctccatccaaacacatt 35513039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 617
Target Start/End: Complemental strand, 40709445 - 40709339
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    |||| |||||||||||  ||||| |||||||||||| |||||||| |  ||| ||||| ||  |||||| ||||| ||| | |||| |||||||||| ||    
T  40709445 aaaagaaattaagtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaaga 40709346  T
Q  611 aaagtaa 617  Q
    |||||||    
T  40709345 aaagtaa 40709339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 44739113 - 44739187
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||| |||||||| |||||||||||||||| |||| ||||||||||| ||| |||| | | ||||||| ||||||    
T  44739113 aagaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgta 44739187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 558
Target Start/End: Complemental strand, 51303544 - 51303490
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||||||||||||  ||||| |||||||||||| |||||||||||    
T  51303544 tttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 51303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 9165302 - 9165371
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| |||| |||||||||||||| |||| | ||| ||||| ||| |||||| ||||||||||||||||    
T  9165302 gaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgta 9165371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 659
Target Start/End: Original strand, 43553109 - 43553170
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacac 659  Q
    |||||||||| |||||||||| ||| ||||||||||| ||||||||||  | ||||||||||    
T  43553109 aatttaaaaatgaaaagtaaattctaccatcctttcctctcctaaactcccaatccaaacac 43553170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 555
Target Start/End: Complemental strand, 50079554 - 50079493
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcat 555  Q
    |||||| |||||||| |||||||||||||||||  || || |||||||||||| ||||||||    
T  50079554 atataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcat 50079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14094164 - 14094112
Alignment:
Q  104 tcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| |||| |||| |||||| |||||||||| ||||||||||||||||    
T  14094164 tcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 14094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 660
Target Start/End: Original strand, 28770852 - 28770961
Alignment:
Q  549 ttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttc 648  Q
    ||||||||||| ||| |||| || ||| |||| |||||||| |||  | ||||||||||  |||| ||||| || |  |||||| ||||||||||| |||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcataatgt--gtaatttaaaaataaaaaataaaccctccactccttttccctcctaaaccttc 28770949  T
Q  649 catccaaacaca 660  Q
    ||||||||||||    
T  28770950 catccaaacaca 28770961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 565
Target Start/End: Original strand, 49832594 - 49832689
Alignment:
Q  467 ttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||||||||||| ||||| |||    ||||||  |||||||  |||||||| |||||||||||||| ||||||   ||| ||||||||||||||||||    
T  49832594 ttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattgaagtattat---atcatttatcatgttattattt 49832689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 656
Target Start/End: Original strand, 25268345 - 25268500
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    |||| ||| |||||||||||||||||  ||||| |||||||||||| ||||||| ||| ||  || || ||  ||||||  |||| ||| | | || |||    
T  25268345 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaattttctaaaaatcattttataatttccgtaat 25268444  T
Q  601 ttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaa 656  Q
    ||||||| | ||||||||| || || ||  ||||||| ||||||  ||||||||||    
T  25268445 ttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccctccatccaaa 25268500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 558
Target Start/End: Original strand, 27739127 - 27739189
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||| |||||| ||||||||||||||||| ||||  |||||| |||||||||||    
T  27739127 tataaaatgttttt-taaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgtt 27739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 669
Target Start/End: Complemental strand, 41498470 - 41498399
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattcttaagg 669  Q
    |||||||||||||||||||||| || || ||  ||||||||||||||  || |||||||||||  |||||||    
T  41498470 aatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacacccttaagg 41498399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 558
Target Start/End: Complemental strand, 42742478 - 42742416
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||| |||||||||||||||||||||||| || |||||||   |||||||||||    
T  42742478 tataaaatgttttt-taaaataaattaagtgtgattgaagtactatatgactatttatcatgtt 42742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 558
Target Start/End: Original strand, 51582072 - 51582119
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||||| |||||||||||| ||||| |||||| |||||||||||    
T  51582072 aaaataaattcagtgtgattgaagtattacatgatcatttatcatgtt 51582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 2506613 - 2506671
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttat 552  Q
    |||||| ||||||||  ||||||||||||||||  ||||| |||||||||||| |||||    
T  2506613 atataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttat 2506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 14093998 - 14094080
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    |||||||| |||||||||||||||| |||| | | || |||| ||||||| || | ||||||||||||||  || ||||||||    
T  14093998 gaatgttagcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtaggacctacacttt 14094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 558
Target Start/End: Original strand, 35927897 - 35927951
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| ||||||||||||||| |  ||||| |||||||||||| |||||||||||    
T  35927897 tttttctaaaataaattaagtatttttgaagtattatatgatcatttatcatgtt 35927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 47071132 - 47071246
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    ||||||||  ||||||| ||||||||  ||||| |||| ||||||| ||||||||||| ||| || || ||  ||||||  |||| ||| ||| || |||    
T  47071132 atgttttttcaaaataagttaagtgtttttgaaatattttatgatcatttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaat 47071231  T
Q  601 ttaaaaacgaaaagt 615  Q
    ||||||| |||||||    
T  47071232 ttaaaaaagaaaagt 47071246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 617
Target Start/End: Complemental strand, 525259 - 525148
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    ||||| ||||||||||||||| || ||||| |||||||| ||| |||||||| || ||| || || ||  |||||| ||||| ||| ||| || ||||||    
T  525259 tttttttaaaataaattaagtttgtttgaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttata-tgtccgtaattta 525162  T
Q  604 aaaacgaaaagtaa 617  Q
    |||| |||||||||    
T  525161 aaaaagaaaagtaa 525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 13386925 - 13386978
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttctttt 479  Q
    |||||||||||||| ||||||||  ||| |||||||||  ||||||||||||||    
T  13386925 tgtttggattgaggatttaggagagaaatggaggagatagtttacttttctttt 13386978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 554
Target Start/End: Original strand, 25454833 - 25454885
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatca 554  Q
    ||||||||| ||||| |||||||| ||||| ||||||||||||||| |||||||    
T  25454833 atgttttta-aaaatgaattaagtctgatttaattattatatgatcatttatca 25454885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 43851215 - 43851146
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| |||||||||||||| ||| |  ||||||| ||| |||  ||||| ||||||||||||||||    
T  43851215 gaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgta 43851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 7444483 - 7444543
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    ||||| ||||||||||||| |||||| |||||| | || | |||||||||||||| |||||    
T  7444483 gtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaat 7444543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 28110050 - 28109986
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatca 151  Q
    ||||||||  ||||||||||||| || ||||||||||  ||| |||||||||| || ||||||||    
T  28110050 gaatgttaggaacactctcttttaagtactttctctaatactcacttttttattggatgaaatca 28109986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 29418671 - 29418595
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttactttttt-atagggtgaaatcaatgta 156  Q
    ||||| ||||| || ||||| |||||||||| |||| ||| || |||| |||||||| || ||||||||||||||||    
T  29418671 taagaggaatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgta 29418595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 35928051 - 35927991
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||| |||| |||  |||||  | ||||||||||||||||||| |||||    
T  35928051 gtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaat 35927991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 36509989 - 36510021
Alignment:
Q  43 ttaattttttaattttaaccatttgatctattt 75  Q
    ||||||||||||||||| |||||||||||||||    
T  36509989 ttaattttttaattttagccatttgatctattt 36510021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 539 - 622
Target Start/End: Original strand, 40964717 - 40964801
Alignment:
Q  539 atatgatcgtttatcatgttattattttaacttattaaaa-aatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    ||||||| |||||||| |||| ||| ||||||| | |||| ||||||| |  |||| || |||||||||| ||||||||||||||    
T  40964717 atatgatggtttatcacgttaatatgttaacttttaaaaaaaatatttgacggtgtccgtaatttaaaaatgaaaagtaaactct 40964801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 43553101 - 43553049
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgat 545  Q
    |||||||| ||||| | ||||||||||||||||| | |||| |||||||||||    
T  43553101 tatataacttgtttctctaaaataaattaagtgttactgaaatattatatgat 43553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 43832458 - 43832358
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaac 180  Q
    ||||| ||||| |||||| |||||||||||| |||| | ||||||| | ||| ||||||  || ||||||||||||  |  ||||||||  |||||||||    
T  43832458 taagaggaatgatatcaaaactctcttttgaacactctttctagcattcactcttttattcggcgaaatcaatgtaggatctacactttggaaatgaaac 43832359  T
Q  181 c 181  Q
    |    
T  43832358 c 43832358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 513 - 561
Target Start/End: Original strand, 49065548 - 49065596
Alignment:
Q  513 aataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    ||||||||||||||||||||| ||||||||||   |||||||| |||||    
T  49065548 aataaattaagtgtgattgaagtattatatgaaaatttatcatattatt 49065596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 495 - 555
Target Start/End: Complemental strand, 51303744 - 51303685
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcat 555  Q
    ||||| |||||||| |||| | ||||||||||||||||| |||||||||||| || |||||    
T  51303744 tataaaatgtttttttaaa-tcaattaagtgtgattgaactattatatgatcattaatcat 51303685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 501 - 617
Target Start/End: Original strand, 52707726 - 52707842
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaa--tatttcatagtgttcgca 598  Q
    ||||||||  ||||||||||| || |  ||||| |||||||| ||| ||||||||||| |||  |||| || ||||||||  ||||| ||| |||| | |    
T  52707726 atgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgtta--ttaaatttttaaaaaaattatttgataatgttggta 52707823  T
Q  599 atttaaaaacgaaaagtaa 617  Q
    ||||||||| |||||||||    
T  52707824 atttaaaaaagaaaagtaa 52707842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 110; Significance: 5e-55; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 39429 - 39190
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||| ||| ||||||||| || | |||||||||||||| ||||| ||   |||| |||||||||||| |||||||||||||||    
T  39429 gtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagt 39330  T
Q  525 gtgatt---gaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactc 621  Q
    ||||||   ||| |||||||||||| |||||||||||| ||| ||||||| |||||||| |||||||||||| || |||||||||| ||||||||||| |    
T  39329 gtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccc 39230  T
Q  622 t-tccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |  || || |||||||||||||||  ||||||||||||||    
T  39229 tccccctcatttcccctcctaaaccctccatccaaacaca 39190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 84)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 33655347 - 33655153
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||| |||| || | |||||||||||||| ||||| |    ||||||||||||||||| |||||||||||||||    
T  33655347 gtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaagt 33655248  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||||| |||||||||||| |||||||||||| ||| ||||||| |||||||| |||||||||||| || |||||||||| |||||||||||    
T  33655247 gtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 33655153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 425 - 644
Target Start/End: Complemental strand, 1051737 - 1051520
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||||||||||| |||||| ||||||||| ||||| || | ||||||||| ||||||| |||||||||||||||    
T  1051737 gtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaattaagt 1051638  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    |||||||||  |||||||||| |||||||||| || ||| ||||||| |||||||| ||||||| |||| || |||||||||| |||| || ||| || |    
T  1051637 gtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaaccctcc 1051540  T
Q  625 catcctttcccctcctaaac 644  Q
    | ||  ||||||||||||||    
T  1051539 cctctattcccctcctaaac 1051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 425 - 644
Target Start/End: Original strand, 25887197 - 25887417
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| ||||  |||||||| || |||||  ||||||||| ||||||||   ||||||||||||||||| |||||||||||||||    
T  25887197 gtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaattaagt 25887296  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttat-taaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||||||| | ||||||||||| ||||||||| ||| ||| ||||||| |  |||||| |||||||  | |||| |||||||||| |||| |||||||||     
T  25887297 gtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaatgtaaactctc 25887396  T
Q  624 ccatcctttcccctcctaaac 644  Q
    || ||| ||||||||||||||    
T  25887397 ccctcccttcccctcctaaac 25887417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 47390860 - 47391096
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||| ||||||||  |||||||  || | |||||||||||||| ||||| |  | ||||||||||||||||| ||||||| ||||| |    
T  47390860 gtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaatt 47390959  T
Q  525 gtgattgaattattatatga-tcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||||||||| |||||||||| | ||||||||||||| ||| ||||| | ||||||||| ||| ||||||| || |||||||||| |||||  |||||||     
T  47390960 gtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaaccaaactctc 47391059  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || ||| |||||||| |||||  ||||||||||||||    
T  47391060 ccctcccttcccctcttaaaccctccatccaaacaca 47391096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 493 - 618
Target Start/End: Complemental strand, 24970336 - 24970211
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||     
T  24970336 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagta 24970237  T
Q  593 ttcgcaatttaaaaacgaaaagtaaa 618  Q
    | || |||||||||| ||||||||||    
T  24970236 tccgtaatttaaaaatgaaaagtaaa 24970211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 452 - 660
Target Start/End: Complemental strand, 41497169 - 41496961
Alignment:
Q  452 aagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgttta 551  Q
    |||||||| || | |||||||||||||| ||||| ||   ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||    
T  41497169 aagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcattta 41497070  T
Q  552 tcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccat 651  Q
    |||||||| ||| |||| || |||||||| ||||| || ||| || ||||||||||  |||||||||   | || ||| ||||||||||||||  |||||    
T  41497069 tcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccat 41496970  T
Q  652 ccaaacaca 660  Q
    |||||||||    
T  41496969 ccaaacaca 41496961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 43230241 - 43230475
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||| ||||||| |||  ||||| ||| || | |||||||||||||| ||||| ||    |||||||||||||||| |||||||||||||||    
T  43230241 gtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagt 43230340  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    | |||||||  |||||| ||||||||||||||||| ||| ||||||| | |||||| | |||| ||||| || ||||||||||  ||||||||||||| |    
T  43230341 gcgattgaagaattatacgatcgtttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaagtaaactctcc 43230439  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | | |||||| ||| |||||  | ||||||||||||    
T  43230440 ccttctttcctctcataaaccctacatccaaacaca 43230475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 490 - 658
Target Start/End: Complemental strand, 4833705 - 4833537
Alignment:
Q  490 atctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcata 589  Q
    |||||||||||||||  || ||||||||||||| ||||||| || ||||||||||| ||||||||||||| ||  ||||||| ||| |||| ||||||||    
T  4833705 atctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcata 4833606  T
Q  590 gtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    ||||  | |||||||||| ||||||||||| || || ||| ||||||||||||||  ||||||||||||    
T  4833605 gtgtctgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 493 - 660
Target Start/End: Complemental strand, 40196703 - 40196536
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||  ||| ||||||| ||| |||| |||| ||||||    
T  40196703 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatatgttaactttttataaaacattttatagtg 40196604  T
Q  593 ttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    | || |||| ||||| ||||||||||| || |  ||| ||||||||| ||||  ||||||||||||||    
T  40196603 tccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacaca 40196536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 467 - 617
Target Start/End: Original strand, 17852918 - 17853067
Alignment:
Q  467 ttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattatttt 566  Q
    ||||||||||||| ||||| ||    || ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  17852918 ttacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcatgttgttatttt 17853017  T
Q  567 aacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    | ||| ||||||| | |||||||||| ||| |||||||||| |||||||||    
T  17853018 atctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagtaa 17853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 425 - 618
Target Start/End: Complemental strand, 34235242 - 34235053
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaag 523  Q
    ||||||||||||||||||||||||||     ||||||    |||||||||| ||| ||||| ||    ||||||||||||||||  ||||||||||||||    
T  34235242 gtgtttggattgagggtttaggagga-----gaggagggtgtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaag 34235148  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    |||||||||| ||||||||||| ||||||||| ||| ||| ||||||| ||| |||| |||||||||||| || |||||||||| ||||||||||    
T  34235147 tgtgattgaagtattatatgattgtttatcatattaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 34235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 527 - 660
Target Start/End: Original strand, 18231693 - 18231826
Alignment:
Q  527 gattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcca 626  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||||||||| | |||||||||| ||||||||||  || ||     
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaagtaaatcctcccc 18231792  T
Q  627 tcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| ||||||||||||||  ||||||||||||||    
T  18231793 tcccttcccctcctaaacgctccatccaaacaca 18231826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 613
Target Start/End: Original strand, 26365772 - 26365961
Alignment:
Q  425 gtgtttggattgagggtttaggaggaa-aagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||||||||||||   |||||||  ||   |||||||||||||| || || |||| ||||||||||| ||||| ||||||||| || |    
T  26365772 gtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaataaactagg 26365871  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||| ||   |||||||||||  |||| | |  ||||||||||||||||    
T  26365872 tgtgattgaagtattatatgattgtttctcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaa 26365961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 554
Target Start/End: Complemental strand, 39856104 - 39855975
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||||||||    
T  39856104 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagt 39856005  T
Q  525 gtgattgaattattatatgatcgtttatca 554  Q
    |||| | || |||||||||||| |||||||    
T  39856004 gtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 13771185 - 13770952
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||| ||||||||||||||||||  |||||||| ||   |||||||||| ||| ||||| ||   ||||||||||||||||| |||||||||||||||    
T  13771185 gtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaattaagt 13771086  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||  | | |||||| || ||||||||||||| ||| ||||||| ||  | ||||||| ||||||| || ||||||||||  | |||||||  || |    
T  13771085 gtgattcgagtgttatatcattgtttatcatgttaatatgttaacttttt--ataatattttatagtgtccgtaatttaaaaataataagtaaatcctcc 13770988  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| |||||||||||||   || |||||||||||    
T  13770987 cctcccttcccctcctaaatcctcaatccaaacaca 13770952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 425 - 571
Target Start/End: Complemental strand, 34228558 - 34228411
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcaca-atctatataacatgtttttataaaataaattaag 523  Q
    ||||||| ||||| |||||||||||| |||||||| || |||||||||||| |||  |||| ||  | ||||||||||||||||| ||||||||||||||    
T  34228558 gtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaattaag 34228459  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaactt 571  Q
    |||||||||| ||||||||||| | ||||||| ||| ||| |||||||    
T  34228458 tgtgattgaagtattatatgattgcttatcatattaatatgttaactt 34228411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 45940828 - 45940660
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||| ||||| ||||||||||||| ||| |||||| |||||||| |||| |||| |||||| |||  || |||  ||||||| ||||||||||    
T  45940828 ctatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatttcatagt 45940729  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || || ||| ||||||  ||||||||||| | || ||| ||||||| |||||| |||||||||||||||    
T  45940728 gtccgtaatataaaaataaaaagtaaactttgccctcccttccccttctaaaccttccatccaaacaca 45940660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 501 - 607
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||  ||||||| |||||||||||| || |||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  601 ttaaaaa 607  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 501 - 607
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||  ||||||| |||||||||||| || |||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatgtt-actttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  601 ttaaaaa 607  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 455 - 592
Target Start/End: Complemental strand, 37417842 - 37417705
Alignment:
Q  455 ggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatca 554  Q
    ||||| |||| |||||||||| ||| ||||| ||   |||||||||||||||||  ||| ||| ||||||||||||||| ||||||||||||||||||||    
T  37417842 ggaggggatggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatca 37417743  T
Q  555 tgttattattttaacttattaaaaaatatttcatagtg 592  Q
    ||| | ||| ||||||| ||| |||| |||||||||||    
T  37417742 tgtgaatatgttaactttttagaaaacatttcatagtg 37417705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 33519053 - 33519288
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| |||| |||||||||  |||||||| || |  | |||||| |||| ||||| || | | |||||| |||||||| | |||||||||||||    
T  33519053 gtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaattaagt 33519152  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| |||||||||||| ||||||||||| ||| || || ||  ||||||  |||| ||| |||  | |||||||| | ||||||||| | || |    
T  33519153 gtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaatccctcc 33519252  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  33519253 cctcccttcccctcctaaaccctccatccaaacaca 33519288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 426 - 660
Target Start/End: Original strand, 41008188 - 41008418
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatg-tttttataaaataaattaagt 524  Q
    ||||||||||||||||||  ||||  |||||||| ||  ||||  ||||||||| ||||| ||   |||||||||||| ||||| |||||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagt 41008287  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttatta--aaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||||||||   ||||||||| ||||||||||||| ||| ||||||| | |  | ||| |  ||||||| | || |||||||||| |||| |||||||||    
T  41008288 gtgattgaa--gttatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaatgtaaactct 41008385  T
Q  623 tccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||     ||||||||||||||  | ||||||||||||    
T  41008386 tcc-----ttcccctcctaaaccctgcatccaaacaca 41008418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 35421969 - 35422163
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||| |||| ||||  ||||||| |||||| ||| |||| |||| ||||| |||| | || ||| |||||||| |||||||||||||||    
T  35421969 gtgtttggattgaggatttaagaggtgaagggagaagatgacttatttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaagt 35422068  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||  ||||| ||| |||||||  ||||| ||||| ||| || || ||  |||||| ||||| ||| ||| || ||||| |||| |||||||||||    
T  35422069 gtttttgaagtatcatatgattatttattatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaaac 35422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 471 - 660
Target Start/End: Original strand, 42306385 - 42306570
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| ||   ||||||||||||| ||| |||||||||||||| ||||||| | ||||||||    |||||| | |||| |||  |||||    
T  42306385 ttttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatat----gtttatgaggttaatatgctaact 42306480  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    | |||||||| |||||||||||| || |||||||||| ||||| |||||  | || ||  ||||||||||||||  || |||||||||||    
T  42306481 ttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacaca 42306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 522 - 659
Target Start/End: Original strand, 10315735 - 10315872
Alignment:
Q  522 agtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactc 621  Q
    |||||||||||| |||||||| |||||||||| ||||| ||| |||| || |||||||| |||||||||||| || | |||||||| ||||| |||| ||    
T  10315735 agtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaaaatgaaaaataaa-tc 10315833  T
Q  622 ttcc-atcctttcccctcctaaactttccatccaaacac 659  Q
      ||  ||| |||||||||||||| ||||||||||||||    
T  10315834 accctctcccttcccctcctaaaccttccatccaaacac 10315872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 510 - 644
Target Start/End: Complemental strand, 32872935 - 32872806
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacg 609  Q
    ||||||||||||||| | ||||||  || ||||||  ||||||||||||| ||| ||||||| ||||||| ||||| ||| | |||| |||||||||| |    
T  32872935 taaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaaaaag 32872836  T
Q  610 aaaagtaaactcttccatcctttcccctcctaaac 644  Q
    ||||||||||||     ||||||||||||||||||    
T  32872835 aaaagtaaactc-----tcctttcccctcctaaac 32872806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 492 - 622
Target Start/End: Complemental strand, 40572406 - 40572277
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||||| |||||| | |||||||||||||| |||||| || |||||||||| | |||||||||||| ||| ||||||| ||||||||||||| ||||     
T  40572406 ctatataatatgtttctctaaaataaattaagcgtgattaaagtattatatgaccttttatcatgttaatatgttaactt-ttaaaaaatattttatagc 40572308  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactct 622  Q
     | || |||||||||| ||||  ||||||||    
T  40572307 atccgtaatttaaaaatgaaatctaaactct 40572277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 504 - 618
Target Start/End: Original strand, 48093977 - 48094091
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    ||||| |||||||||||||||||| || || |||||||||||| |||||||| ||||||||| || |   ||||||| |||| |||| ||||| ||||||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaattta 48094076  T
Q  604 aaaacgaaaagtaaa 618  Q
    |||| ||||||||||    
T  48094077 aaaaagaaaagtaaa 48094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 564
Target Start/End: Complemental strand, 31571709 - 31571568
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatg-tttttataaaataa-attaa 522  Q
    |||||||||||||||||||||||||  ||| |||| ||   |||||||||||||| ||||| ||   | |||||||||| ||||| ||||| || |||||    
T  31571709 gtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaatattaa 31571610  T
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattatt 564  Q
    ||||||||||| |||||||| || ||||||||||||| ||||    
T  31571609 gtgtgattgaagtattatataattgtttatcatgttaatatt 31571568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 36267792 - 36267557
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || |  | | |||| |||| ||||| |||| | || ||| ||||||||  |||||| | |||||    
T  36267792 gtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatagtaagt 36267693  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| |||||||||||| |||||||| || ||  || || ||  ||||||  |||| ||| | | || |||||||||| ||||| ||| | || |    
T  36267692 gtttttgaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagccctcc 36267593  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  36267592 cctcccttcccctcctaaaccctccatccaaacaca 36267557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 37549619 - 37549706
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||  || ||||||||    
T  37549619 aagaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacacttt 37549706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 13919963 - 13919869
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || ||||||||||||||||||||| ||||||||||| |||  ||||| ||||||||||||||||  || |||||||| |||||| ||||    
T  13919963 gaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacc 13919869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 13425280 - 13425115
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    |||||| |||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||| || |||| | |||||||||||  ||||||  | ||||||    
T  13425280 tttttaaaaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaattta 13425181  T
Q  604 aaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattcttaagg 669  Q
    ||||  |||| |||||  | |  | | ||||||||||||||  || |||||||||||  |||||||    
T  13425180 aaaataaaaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacacccttaagg 13425115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 22786151 - 22786220
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  22786151 gaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgta 22786220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 660
Target Start/End: Complemental strand, 28074255 - 28074107
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaa 611  Q
    |||||||||||||||  ||||| |||||||||||| ||||||| ||| ||| || || ||  ||||||  |||| ||| ||| || |||||||||| |||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 28074156  T
Q  612 aagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||| |  ||| || ||| |||||||||||||| ||| |||||||||||    
T  28074155 aagtgagttctcccctcccttcccctcctaaaccttcaatccaaacaca 28074107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 643
Target Start/End: Complemental strand, 30891165 - 30891015
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaa-aaatatttcatagt 591  Q
    ||||||| |||||||| |||| |||||||| |||||||||| |||||||| ||||||||| || ||| ||||| |  |||  ||| | |||||| |||||    
T  30891165 tatataatatgtttttttaaa-taaattaaatgtgattgaagtattatattatcgtttattatattaatatttaattttaaaaaatatatattttatagt 30891067  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaa 643  Q
    || || |||||||||| |||||||||||||| |  | ||||||| |||||||    
T  30891066 gtccgtaatttaaaaatgaaaagtaaactctccatttctttcccttcctaaa 30891015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 493 - 580
Target Start/End: Original strand, 42087068 - 42087155
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaa 580  Q
    |||||||||| || || ||||||||||||||||| ||||||||||||||| ||||||| ||| |||| |||  |||||| ||||||||    
T  42087068 tatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgctaactttttaaaaaa 42087155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 558
Target Start/End: Complemental strand, 18063721 - 18063667
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 26703437 - 26703531
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || |||||||||||| |||||||| ||||||||||| ||| |||||| ||||||||| ||||||  || ||||||||| ||||| ||||    
T  26703437 gaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgtaggacctacactttagaaatggaacc 26703531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Complemental strand, 26190077 - 26189992
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||||||||||| ||||||||||| |||| ||| |||||| |||| ||||||| |||  || |||||||| |||||||||||    
T  26190077 caacactctcttttgaacactttctctaacactcactcttttattgggtaaaatcaacgtaggacctacactttgaaaatgaaacc 26189992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 48152055 - 48152127
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaa 568  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| |||||| ||||| |||||| ||||||||    
T  48152055 tataacatgtttttctaaaataaatttagtgtgattgaagtatta-atgatcatttattatgttagtattttaa 48152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 471 - 607
Target Start/End: Complemental strand, 18795788 - 18795652
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| || | | |||||| |||||||| ||||| |||| |||||| ||||||||||| || |||| ||||| ||||| |||||| |  |    
T  18795788 ttttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaagtgttattgaattattgtacgatcatttattatgttgttatttcattt 18795689  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaa 607  Q
    ||||  ||||||||| |||||| | | ||||||||||    
T  18795688 tattttaaaatattttatagtgcttgtaatttaaaaa 18795652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 23934080 - 23934021
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgt 155  Q
    |||||||||||||| |||||||| ||||||||||||| |||||| |||| ||||||||||    
T  23934080 caacactctcttttaagcactttgtctagcacttactcttttattgggtaaaatcaatgt 23934021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 19840882 - 19840948
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    ||||| || ||||||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||||    
T  19840882 gaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaat 19840948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 617
Target Start/End: Complemental strand, 23116420 - 23116306
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaata-tttcatagtgttcgcaattt 602  Q
    ||||| ||||| |||||||||||||||||| |||||||| ||| |||||||||||  ||||| || || |||| ||| | ||| |||||||  | |||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaattt 23116321  T
Q  603 aaaaacgaaaagtaa 617  Q
    ||||| |||||||||    
T  23116320 aaaaaagaaaagtaa 23116306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 18127390 - 18127341
Alignment:
Q  516 aaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  18127390 aaattaagtgtgattgaagtattatatgatcatttatcatgttactattt 18127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 19494507 - 19494450
Alignment:
Q  99 cactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||| ||||||||||| ||| ||| |||||| ||||||||||||||||    
T  19494507 cactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgta 19494450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 20393693 - 20393746
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||| |||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgttactattt 20393746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 542
Target Start/End: Original strand, 37925846 - 37925963
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | || |||||| |||| ||||| || | | || ||| |||||||| | ||||| |||||||    
T  37925846 gtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagattaagt 37925945  T
Q  525 gtgattgaattattatat 542  Q
    ||  ||||| ||||||||    
T  37925946 gtttttgaagtattatat 37925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 660
Target Start/End: Complemental strand, 48881711 - 48881562
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    |||||||||||||| |  |||||  ||||||| ||| ||||||||||| ||| || || ||  | |||| ||||| ||| ||| || |||||||||| ||    
T  48881711 aaaataaattaagtatttttgaagcattatataatcatttatcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaaga 48881612  T
Q  611 aaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||| |  | || ||| ||||||||||||||  ||||||||||||||    
T  48881611 aaagtaagccatcccctcccttcccctcctaaaccctccatccaaacaca 48881562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 13919789 - 13919849
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| |||||||||||  ||  ||||| ||||||||||||||||    
T  13919789 caacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgta 13919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 31960028 - 31959968
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||| || |||||| ||||||    
T  31960028 caacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgta 31959968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 470 - 558
Target Start/End: Original strand, 38378095 - 38378183
Alignment:
Q  470 cttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||||| ||||  || | |||||||||||||||||  ||||||||| || ||| |||||  |||||||||||||||||| |||||    
T  38378095 cttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatgtt 38378183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 425 - 472
Target Start/End: Complemental strand, 47230058 - 47230011
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttactt 472  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||||    
T  47230058 gtgtttgaattgagggtttaggaggaaaagggaggggaggatttactt 47230011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 670
Target Start/End: Complemental strand, 30592389 - 30592247
Alignment:
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccat 627  Q
    |||||| |||||||||||  |||||||| | ||||||| || || |||||||  |||| |||||||  | |||||||||| ||||||||| | || || |    
T  30592389 attgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccctt 30592290  T
Q  628 cctttcccctcctaaactttccatccaaacacattcttaagga 670  Q
    || || ||||||||||   |||||||||| |||  ||||||||    
T  30592289 ccctttccctcctaaatcctccatccaaatacacccttaagga 30592247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 45909455 - 45909525
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttact-tttttatagggtgaaatcaatgta 156  Q
    ||||| |||||||||| ||||||||||||| || |||||| | ||| ||||||| ||||||||||||||||    
T  45909455 gaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgta 45909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 589
Target Start/End: Complemental strand, 47229973 - 47229907
Alignment:
Q  523 gtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcata 589  Q
    ||||||||||||||||| ||||| ||||||||||||| ||| ||  ||| |||| ||||||||||||    
T  47229973 gtgtgattgaattattacatgattgtttatcatgttaatatgttcgctttttaagaaatatttcata 47229907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 26703604 - 26703551
Alignment:
Q  103 ctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||| | ||||||||||| ||| |||||| ||||||||||||||||    
T  26703604 ctcttttgagcattctctctagcactcactcttttattgggtgaaatcaatgta 26703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 41496962 - 41497011
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttactttt 474  Q
    |||||||||| ||||||||||||||  |||||||| ||||||||||||||    
T  41496962 gtgtttggatggagggtttaggaggggaagggaggggatgatttactttt 41497011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 25428485 - 25428545
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| ||| ||||||| ||| |||||| || | |||||||||||    
T  25428485 caacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgta 25428545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 546
Target Start/End: Original strand, 26079923 - 26080046
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatat--aacatgtttttataaaataaattaa 522  Q
    |||||||||| ||| |||||||||| |||  ||  ||| ||||||| ||| |||| | ||| |||  ||||||  ||||| ||||| ||||||||||| |    
T  26079923 gtgtttggatggagagtttaggagggaaaatgataagaagatttacctttttttttttaattacagactatatttaacatatttttttaaaataaattta 26080022  T
Q  523 gtgtgattgaattattatatgatc 546  Q
     |||||||||| ||||||||||||    
T  26080023 atgtgattgaaatattatatgatc 26080046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 546
Target Start/End: Original strand, 26103710 - 26103833
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatat--aacatgtttttataaaataaattaa 522  Q
    |||||||||| ||| |||||||||| |||  ||  ||| ||||||| ||| |||| | ||| |||  ||||||  ||||| ||||| ||||||||||| |    
T  26103710 gtgtttggatggagagtttaggagggaaaatgataagaagatttacctttttttttttaattacagactatatttaacatatttttttaaaataaattta 26103809  T
Q  523 gtgtgattgaattattatatgatc 546  Q
     |||||||||| ||||||||||||    
T  26103810 atgtgattgaaatattatatgatc 26103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 48881563 - 48881623
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||||||||||  |||||||| ||||  ||||||||||||| |||||    
T  48881563 gtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaat 48881623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 555
Target Start/End: Original strand, 3143564 - 3143615
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcat 555  Q
    ||||||||||||||||||||| |  ||||| |||||||||||| ||||||||    
T  3143564 tttttataaaataaattaagtttttttgaagtattatatgatcatttatcat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 558
Target Start/End: Complemental strand, 19261992 - 19261945
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||||||| |||||||||| || ||||||||| |||||||||||    
T  19261992 aaaataaattaattgtgattgaagtactatatgatcatttatcatgtt 19261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 19423020 - 19422945
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||| |||||||| ||||| | |||| |||||| |||| ||| ||| || || |||||||||||||    
T  19423020 taagaagaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgta 19422945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 565
Target Start/End: Original strand, 7791802 - 7791864
Alignment:
Q  503 gtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||| ||| ||||||||| ||||||| || |||||||||||  ||||||||||| ||||||    
T  7791802 gtttttttaacataaattaaatgtgatttaagtattatatgattatttatcatgtttttattt 7791864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 644
Target Start/End: Original strand, 13771124 - 13771170
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaac 644  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||||    
T  13771124 aatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaac 13771170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 14759826 - 14759744
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||| || ||||||||||||||||||||| || |||||||  ||| |||||| || |||||| ||||||  || ||||||||    
T  14759826 gaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacacttt 14759744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 31571648 - 31571710
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| |||||||||||||| || ||  ||||||||||||||  || |||||||||||    
T  31571648 aatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacaca 31571710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 39856043 - 39856105
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| ||||||||||| || || ||| ||||||||||||||  || |||||||||||    
T  39856043 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 39856105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 17354707 - 17354638
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||| ||||||||||| |||||| |||| | | |||||| || |||||||||||||    
T  17354707 gaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgta 17354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 490
Target Start/End: Complemental strand, 18231825 - 18231760
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaa 490  Q
    |||||||||| ||| ||||||||||  |||||||| || |||||||||||| ||| ||||| ||||    
T  18231825 gtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaa 18231760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 21857432 - 21857485
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||| |||||||||||||||||  ||||| |||| ||||||| |||||||||||    
T  21857432 ttttttaaaataaattaagtgtttttgaaatattgtatgatcatttatcatgtt 21857485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 25428659 - 25428590
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| | | ||| ||| ||| |||||| | ||||||||||||||    
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgta 25428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 33008104 - 33008173
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || |||||||| ||||||| |||| ||||||||||| ||| |||||| || |||||||| ||||    
T  33008104 gaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgta 33008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 455 - 519
Target Start/End: Original strand, 10315648 - 10315712
Alignment:
Q  455 ggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaat 519  Q
    ||||| || |||||||||||||||| |||||  ||  ||||||||||| ||||| ||||||||||    
T  10315648 ggaggggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaataaat 10315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 14795128 - 14795200
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| || |||||||| ||||| | |||| |||||| || | |||||||||| || |||||||||||||    
T  14795128 gaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgta 14795200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 15242120 - 15242192
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| || |||||||| ||||| | |||| |||||| || | |||||||||| || |||||||||||||    
T  15242120 gaagaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgta 15242192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 549 - 617
Target Start/End: Original strand, 19835838 - 19835906
Alignment:
Q  549 ttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    |||| ||||||||||||||| || ||||| || |||| ||||| | || |||||||||| |||||||||    
T  19835838 ttatgatgttattattttaattttttaaagaacattttatagtttccgtaatttaaaaatgaaaagtaa 19835906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 23029532 - 23029480
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaa 518  Q
    |||||||||||||| ||||| | |  ||||||||||||||||| |||||||||    
T  23029532 tttacttttcttttttaaattatagactatataacatgtttttctaaaataaa 23029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 461
Target Start/End: Complemental strand, 31364283 - 31364247
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggag 461  Q
    |||||||||||||||||||||||||  ||||||||||    
T  31364283 gtgtttggattgagggtttaggaggggaagggaggag 31364247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 44511107 - 44511047
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||  ||||| | |||| ||||||||||| |||||||||| || |||||||||||||    
T  44511107 caacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgta 44511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 45909630 - 45909570
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||  ||| |||||| |||| ||| |||||| |||| |||||||||||    
T  45909630 caacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgta 45909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 7e-51; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 15224933 - 15224739
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||  |||||||||||||  |||||||| |||| |||||||||||||| ||||| ||   ||||||||||||||||| || ||||||||||||    
T  15224933 gtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagt 15224834  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||||| |||||||||||| |||||||||||| ||| ||| ||| |||||||| |||||||||||| || |||||||||| |||||||||||    
T  15224833 gtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 15224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 36347780 - 36347545
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||| | ||   |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||||||||    
T  36347780 gtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagt 36347681  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||| || ||||||||||||| ||| ||||||  ||||||||||| ||||||| | || ||| |||||| ||||||| ||||||      
T  36347680 gtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaactctct 36347581  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  | ||||||||||||    
T  36347580 cttcccttcccctcctaaacccttcatccaaacaca 36347545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 426 - 666
Target Start/End: Complemental strand, 31796002 - 31795767
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    |||||||||||| |||||||||||  ||||||||    |||| | ||||||||||||||||||    || ||||||||||||| ||||||||||||||||    
T  31796002 tgtttggattgaaggtttaggaggggaagggagg----gattaa-ttttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtg 31795908  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttcc 625  Q
    |||||||| |||||||||||||||||||||||| ||||||||  || | ||||||  ||||||||||| || ||||||||||||||||||||   || ||    
T  31795907 tgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctccc 31795808  T
Q  626 atcctttcccctcctaaactttccatccaaacacattctta 666  Q
     ||| ||| |||| |||||  |||||||||||||| |||||    
T  31795807 ctcccttcacctcataaaccctccatccaaacacactctta 31795767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 492 - 673
Target Start/End: Original strand, 23748167 - 23748348
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||||||||||||||  ||||||||| ||||||||||||| |||||||| |||||||||||||||| ||| ||||||| |||||| | ||||||||||    
T  23748167 ctatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgttaatatgttaactttttaaaagacatttcatagt 23748266  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattcttaaggactt 673  Q
    || || | |||||||| ||||||| ||| || || ||| ||||||||||||||  ||||||||||||||  |||||||||||    
T  23748267 gtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacacccttaaggactt 23748348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 424 - 656
Target Start/End: Complemental strand, 8427111 - 8426887
Alignment:
Q  424 cgtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||||||||||||| ||||||||| ||   |||||||||| ||| ||||  |||  | ||||||||||||||| ||||||||||||||    
T  8427111 cgtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaag 8427012  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    || ||||||| |||||||||||| |||||||||        ||||||| |||||||| |||||||||||| |  ||||||||||  |||||||||| ||     
T  8427011 tgcgattgaagtattatatgatcatttatcatg--------ttaactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctc 8426920  T
Q  624 ccatcctttcccctcctaaactttccatccaaa 656  Q
    || ||| ||||||||||||||| ||||| ||||    
T  8426919 ccttcccttcccctcctaaactctccattcaaa 8426887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 39732967 - 39732774
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||  ||||  |||| | | ||||||||||||||| ||| ||||| ||   ||||||| ||||||||| |||||||||||||||    
T  39732967 gtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 39732869  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
     |||||||| ||||||||||||||||||||||||| ||| ||||||| ||| |||| |||||||| |||||| |||||||||| |||||||||||    
T  39732868 atgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaac 39732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 36046440 - 36046208
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| ||||  |||||||| || | ||||||||| |||| ||||| ||   | |||||||||| |||||||||||||||| |||    
T  36046440 gtgtttggattgagggtttatgaggggaagggaggggagg-tttacttttgttttttaaattacggacgatataacatgcttttataaaataaattgagt 36046342  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    |  |||||| |||||| ||||| |||| ||||||| ||| ||||||| |||||||| ||||  |||||| || |||||||||| ||||| |||||||| |    
T  36046341 g--attgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactctcc 36046244  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | || |||||||||||||||  ||||||||||||||    
T  36046243 cctcatttcccctcctaaaccctccatccaaacaca 36046208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 466 - 608
Target Start/End: Complemental strand, 28262641 - 28262499
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| |    ||||||||||||||||| ||||||||||||  |||||||||| ||||| ||||||||||||||||||||||| |    
T  28262641 tttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattatat 28262542  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaac 608  Q
    |||||| |||||||||||||||||||||||  |||||||||||    
T  28262541 taactttttaaaaaatatttcatagtgttcataatttaaaaac 28262499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 425 - 640
Target Start/End: Complemental strand, 36567091 - 36566874
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttactttt-cttttctaaatcacaatctatataacatgtttttataaaataaattaag 523  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||||| | ||| ||||| |  |  |||||||||||||||| || ||||||||||     
T  36567091 gtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaattaat 36566992  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttatta-aaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||||||||| |||||||||||| |||||||||||| ||| ||||||| ||| |||||  ||||||| ||| || |||||||||| ||||||||||  ||    
T  36566991 tgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaagtaaatcct 36566892  T
Q  623 tccatcctttcccctcct 640  Q
      ||||| ||||||||||    
T  36566891 ctcatcccttcccctcct 36566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 516 - 660
Target Start/End: Original strand, 34209560 - 34209704
Alignment:
Q  516 aaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    |||||||||||||||||| | ||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||| | |||||||||| |||||||    
T  34209560 aaattaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaagt 34209659  T
Q  616 aaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || ||||||| |||  |||| | ||||||  | ||||||||||||    
T  34209660 aatctcttccctcccctcccattctaaacccttcatccaaacaca 34209704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 493 - 619
Target Start/End: Original strand, 16565850 - 16565976
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||  ||| ||||||| ||||||||  |||||||||     
T  16565850 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaactttttaaaaaacgtttcatagta 16565949  T
Q  593 ttcgcaatttaaaaacgaaaagtaaac 619  Q
    | || ||||||||||  ||||||||||    
T  16565950 tccgtaatttaaaaataaaaagtaaac 16565976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 519 - 621
Target Start/End: Complemental strand, 42316909 - 42316807
Alignment:
Q  519 ttaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||  ||||||| |||||||| ||||||||||||| |||||||||||| ||||||||||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaa 42316810  T
Q  619 ctc 621  Q
    |||    
T  42316809 ctc 42316807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 608
Target Start/End: Complemental strand, 39354372 - 39354230
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||||||| |||| ||||| ||||  |||||||||||||| | ||||||||| | |||||||||||| ||||| ||||||| |||| ||||||||||||    
T  39354372 tttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatgttattattt 39354273  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaac 608  Q
    ||| || || |||||||||||||| ||| || |||||||||||    
T  39354272 taatttttttaaaaatatttcataatgtgcgtaatttaaaaac 39354230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 492 - 619
Target Start/End: Original strand, 12751886 - 12752014
Alignment:
Q  492 ctatataacatgttttta-taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatag 590  Q
    ||||||||||| |||||  |||||||| ||||||||||||||| |||||||||||||||||| || ||||||| |||| || | ||||||||||||||||    
T  12751886 ctatataacatattttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcatag 12751985  T
Q  591 tgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||| |  ||||| ||||||||||| ||||    
T  12751986 tgtccataattttaaaacgaaaagcaaac 12752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 493 - 607
Target Start/End: Complemental strand, 37740063 - 37739950
Alignment:
Q  493 tatataacatgttttta-taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| || ||||  | ||||||||    
T  37740063 tatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaactttttgaaaa--acttcatagt 37739966  T
Q  592 gttcgcaatttaaaaa 607  Q
    ||||| ||||| ||||    
T  37739965 gttcgtaattttaaaa 37739950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 495 - 619
Target Start/End: Original strand, 39821744 - 39821868
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgtt 594  Q
    |||||||||||||| |||||||||||||||| |||| || ||||||| |||| |||||||||||| ||| ||||||  ||||| | |||||||||||||     
T  39821744 tataacatgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgttaatatgttaactctttaaatattatttcatagtgtc 39821843  T
Q  595 cgcaatttaaaaacgaaaagtaaac 619  Q
    || |||||||||| ||||| |||||    
T  39821844 cgtaatttaaaaaagaaaactaaac 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 492 - 660
Target Start/End: Original strand, 40022442 - 40022613
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttat--tattttaacttatt-aaaaaatatttcat 588  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||| ||||  ||| || |||| || |||||| |||||||    
T  40022442 ctatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttactttttaaaaaaacatttcat 40022541  T
Q  589 agtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||  | |||||||||| |||| |||||| || || ||| ||| |||| |||||  ||||||||| ||||    
T  40022542 agtgtctgtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcaca 40022613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 427 - 660
Target Start/End: Original strand, 9631565 - 9631800
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttata---aaataaattaag 523  Q
    ||||||||||| ||||||| ||  |||||||  ||| | |||||||||||||| ||||  |    ||||||||||||||||| |    |||||||| |||    
T  9631565 gtttggattgaaggtttagaagagaaagggaaaagagg-tttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaag 9631663  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||||| |||| |||||||| |||||||||||||||| ||| ||||||| |||||  | ||||||| |||| || |||||||||||||||||| ||| ||     
T  9631664 tgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctc 9631763  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
       ||| || |||||||||||  ||||||||||||||    
T  9631764 ttctccctttccctcctaaaccctccatccaaacaca 9631800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 547
Target Start/End: Original strand, 35736180 - 35736302
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || |  ||| ||||||||| ||||||||   ||| ||||||||||||| |||||||||| ||||    
T  35736180 gtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaatgaagt 35736279  T
Q  525 gtgattgaattattatatgatcg 547  Q
    |||| |||| |||||||||||||    
T  35736280 gtgactgaagtattatatgatcg 35736302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 613
Target Start/End: Original strand, 9426990 - 9427179
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||  ||||||||||  ||||||||||| | |||  ||||||||| ||||| || | |||||||||||||||||  ||| ||||||| |     
T  9426990 gtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaattatgc 9427089  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaac-ttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    ||||||||| ||||||||| | |||||||||| || |||  |||| |||  |||||| |||| ||||||| || |||||||||| |||||    
T  9427090 gtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 492 - 619
Target Start/End: Complemental strand, 19566993 - 19566865
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttatt-aaaaaatatttcatag 590  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || |||||||||| ||| |||  |||||| || |||||| |||||||||    
T  19566993 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgaccgtttatcattttaatatgctaactttttaaaaaaacatttcatag 19566894  T
Q  591 tgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||  | |||||||||  || ||||||||    
T  19566893 tgtctgtaatttaaaactgagaagtaaac 19566865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 3094592 - 3094459
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||| | ||||||||| || || | |||||| |||| ||||| |||| |||| ||| |||||||| |||||||||||  ||    
T  3094592 gtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatttcgt 3094493  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  ||||| |||||||||||  |||||||||||    
T  3094492 gtttttgaagtattatatgattatttatcatgtt 3094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 505 - 602
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattt 602  Q
    |||| |||||||||||||||||||||| | ||||||||||| ||||||||||||| |||  |||||| |||||||| |||||||||||| || |||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 591
Target Start/End: Original strand, 12541775 - 12541937
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgttttta-taaaataaattaag 523  Q
    |||||||||||||||||||||||||     ||||| ||   | |||||||||||| ||||| ||   |||||||| || |||||  ||||||||||||||    
T  12541775 gtgtttggattgagggtttaggagg-----ggaggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaattaag 12541869  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    || ||||||| || |||||||||||||||||||||| | | ||||||| |||||||| |||| |||||    
T  12541870 tgcgattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagt 12541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 667
Target Start/End: Original strand, 2241416 - 2241665
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||| ||||||||||| ||||||  |||||||| ||   ||||||||| | || ||||| ||   |||||||| | |||||| |||||||||||||||    
T  2241416 gtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaattaagt 2241514  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaactt--------attaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagta 616  Q
    || |||||| ||||||||||| ||||||||||||| ||| |||| ||        |  |||||| ||| ||||| || |  |||||||||| ||||| ||    
T  2241515 gtaattgaagtattatatgattgtttatcatgttaatatgttaaattttaaaaaaaaaaaaaaacattccatagcgtccataatttaaaaatgaaaaata 2241614  T
Q  617 aactcttccatcctttcccctcctaaactttccatccaaacacattcttaa 667  Q
    |||||| || | |||||||| |||||||  | ||||||||||||| |||||    
T  2241615 aactctccccttctttccccacctaaacccttcatccaaacacatccttaa 2241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 425 - 554
Target Start/End: Original strand, 41841687 - 41841816
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||| ||||||||| ||||||| | || | |||  ||||||||| ||||| || | ||||||||||| ||||  ||||||||||||||     
T  41841687 gtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaagg 41841786  T
Q  525 gtgattgaattattatatgatcgtttatca 554  Q
    ||||||| | |||||||||||  |||||||    
T  41841787 gtgattggagtattatatgattttttatca 41841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 553
Target Start/End: Original strand, 41778778 - 41778906
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||| ||| ||||||||| || | ||||||||| |  | ||||| |    |  ||||| |||||||| |||||||||||||||    
T  41778778 gtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaattaagt 41778877  T
Q  525 gtgattgaattattatatgatcgtttatc 553  Q
    ||||||||| |||||||||||| ||||||    
T  41778878 gtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 460 - 559
Target Start/End: Complemental strand, 6721826 - 6721727
Alignment:
Q  460 agatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtta 559  Q
    |||||||||| ||||||||| |||| |||    |||||| ||||||||| |||||||||| ||||||||||||| |||||||| ||| ||||||||||||    
T  6721826 agatgatttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgtta 6721727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 462 - 561
Target Start/End: Original strand, 18811371 - 18811469
Alignment:
Q  462 atgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||| ||||||||||||| ||||| ||| |   |||||  ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  18811371 atgacttacttttcttttttaaattacagtaactataaagtgttttt-taaaataaattaagtgtgattgaaatattatatgattgtttatcatgttatt 18811469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 619
Target Start/End: Original strand, 7681332 - 7681443
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||| |     ||| || ||||||| | ||||||||||||||| | | |||||||||    
T  7681332 tttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgt----atatcatgttaacttttaaaaaaatatttcataatatccgcaattta 7681427  T
Q  604 aaaacgaaaagtaaac 619  Q
    ||||  ||||||||||    
T  7681428 aaaataaaaagtaaac 7681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 42182889 - 42182958
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 42182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 42296542 - 42296409
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||| ||||||||  ||||||||||| | || |||||| |||| ||||| || | | || ||| || ||||| |||||| ||||||||    
T  42296542 gtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaattaagt 42296443  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  || ||||||||||||||| ||||| |||||    
T  42296442 gtttttaaattattatatgatcatttattatgtt 42296409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 1107039 - 1107107
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||| ||||||||||||||||||||| ||||||||||  ||| |||||| ||||||||||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 1107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 37228673 - 37228613
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||    
T  37228673 caacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgta 37228613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 555
Target Start/End: Original strand, 886927 - 887051
Alignment:
Q  429 ttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtga 528  Q
    |||| ||||||||||||||||  |||| | | || |  ||||||||||||| ||||| |||  | |||||| ||| |||| |||||||||||| ||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattaca--caatataaaatgcttttttaaaataaattatgtgtga 887024  T
Q  529 ttgaattattatatgatcgtttatcat 555  Q
    ||||| |||||||||||| ||||||||    
T  887025 ttgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 4964853 - 4964784
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||    
T  4964853 gaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgta 4964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 28898217 - 28898148
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||| ||||||||||| ||||||||||| ||| |||||| ||||||||||||||||    
T  28898217 gaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 28898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 31395625 - 31395556
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| ||||||||||||||||||||| ||| ||||||| |||  ||||| ||||||||||||||||    
T  31395625 gaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgta 31395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 20951601 - 20951686
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    |||| ||||| || |||||||||||||||||||||  |||||||||||| | |||||| ||||||||||||||||  || ||||||||    
T  20951601 aagaggaatgctagcaacactctcttttgagcact--ctctagcacttattcttttattgggtgaaatcaatgtaggacctacacttt 20951686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 532 - 620
Target Start/End: Original strand, 27926665 - 27926753
Alignment:
Q  532 aattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaact 620  Q
    |||||||||||||||||||||||||||| ||| ||||||| ||||  || |||| ||||| | || |||||||||| ||||| ||||||    
T  27926665 aattattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaataaact 27926753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 620
Target Start/End: Original strand, 35325353 - 35325469
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaattta 603  Q
    ||||| ||||||||||||||| |  ||||| |||||||||||| ||||||||||||||| || || || ||||||| ||||| ||| |||    ||||||    
T  35325353 tttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattcaattttttaaaaattattttataatgtcgttaattta 35325452  T
Q  604 aaaacgaaaagtaaact 620  Q
    |||| |||||| |||||    
T  35325453 aaaaggaaaagcaaact 35325469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 37719827 - 37719923
Alignment:
Q  80 ataagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatg 176  Q
    |||||| ||||| || ||||| ||||||||||||||| | ||||||||| ||| |||||| || |||||||||||||  || ||||||||| |||||    
T  37719827 ataagaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatg 37719923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 45257312 - 45257547
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| ||||||||||  || ||| | || || | |||||| |||| ||||| || | | || ||| |||||||  |||||||||||||||    
T  45257312 gtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaattaagt 45257411  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaat-atttcatagtgttcgcaatttaaaaacgaaaagtaaactctt 623  Q
    ||  ||||| |||||||||||| |||||||| || ||| || || || | ||||||| |||| ||| | | || |||||||||| |||||||||||  |     
T  45257412 gtttttgaagtattatatgatcatttatcatattgttaattcaa-ttttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaaaccatc 45257510  T
Q  624 ccatcctttcccctcctaaactttccatccaaacaca 660  Q
     | ||| ||||| |||||||   ||||||||||||||    
T  45257511 tcctcccttcccatcctaaaacctccatccaaacaca 45257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 428 - 555
Target Start/End: Original strand, 33265615 - 33265741
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    ||||||||||||||||||||||  |||||||| ||||| | | |||| |||| ||||| || | | || ||| |  ||||| |||||||||||||||||     
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttt-taaaataaattaagtgtt 33265713  T
Q  528 attgaattattatatgatcgtttatcat 555  Q
     ||||| |||||||||||| ||||||||    
T  33265714 tttgaagtattatatgatcatttatcat 33265741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 15509102 - 15509028
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||| |||||||| |||||||||||||| |||||| ||| || |||||||| ||| || ||||||||||||||||    
T  15509102 aagaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgta 15509028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 37398806 - 37398904
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaac 180  Q
    |||| ||||| || ||||||||| ||||||||| | |||||| ||||||||||||||| || ||||||| |||||  || |||||||| ||||| ||||    
T  37398806 aagaggaatgctagcaacactcttttttgagcattctctctaacacttacttttttattggatgaaatccatgtaggacctacactttgaaaataaaac 37398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 28898031 - 28898128
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||||||| || ||||||||||||||||| ||| ||| ||||||| ||| |||||| || |||||||||||||  |  ||||||||  ||||||||||    
T  28898031 gaagaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacc 28898128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 31061364 - 31061497
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| |||||||||||  || ||| | || |  | |||||| |||| ||||| || | | || ||| |||| ||| |||||||||||||||    
T  31061364 gtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaattaagt 31061463  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  ||||| |||||||||||| |||||||||||    
T  31061464 gtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 565
Target Start/End: Original strand, 20545798 - 20545854
Alignment:
Q  509 ataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| |||||||||| |||||||||||  ||| ||||||||||||||    
T  20545798 ataaaataaattaaatgtgattgaagtattatatgattatttctcatgttattattt 20545854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 466 - 542
Target Start/End: Complemental strand, 29525931 - 29525855
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatat 542  Q
    |||| ||||||||| ||||||||    ||||||| |||||||| ||||||||||||| |||||||||| ||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatat 29525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 585
Target Start/End: Original strand, 32503232 - 32503324
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatattt 585  Q
    |||||||||| ||||| ||||||||||||||| ||||| || |||||||||||  |||||||| ||  ||| ||||||| ||| |||| ||||    
T  32503232 tatataacatatttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaactttttacaaaacattt 32503324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 37228507 - 37228559
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaa 148  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||    
T  37228507 caacactctcttttgagcactctctctagcactcactcttttattgggtgaaa 37228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 660
Target Start/End: Original strand, 35736340 - 35736427
Alignment:
Q  573 ttaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||  ||||||||||| || |||||||||||||||||| | | || || ||| ||| ||||||||||  ||||||||||||||    
T  35736340 ttaaaaaacttttcatagtgtccgaaatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacaca 35736427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 644
Target Start/End: Original strand, 887210 - 887334
Alignment:
Q  514 ataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||    ||||||  | || ||||| |||| ||||  | || |||||||||| |||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcatgtt----ttttaa--tttttaaaaacattttatagcatccgtaatttaaaaaagaaaa 887303  T
Q  614 gtaaactcttccatcctttcccctcctaaac 644  Q
    |||| | || || ||| ||||||||||||||    
T  887304 gtaagcgctcccctcccttcccctcctaaac 887334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 31928196 - 31928146
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttatta 562  Q
    |||||||||||||||  ||||| |||||||||||| |||||||||||||||    
T  31928196 aaataaattaagtgtttttgaagtattatatgatcatttatcatgttatta 31928146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 36347719 - 36347781
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| |||||||||||||| || ||| ||||||||||||||  || |||||||||||    
T  36347719 aatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacaca 36347781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 660
Target Start/End: Complemental strand, 15085860 - 15085703
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaa-ttt 602  Q
    |||||| ||||||||||||||||  ||||| |||||||||||| ||||||| ||| ||| || || ||  ||||||  |||| ||| ||| || || |||    
T  15085860 tttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaatttt 15085761  T
Q  603 aaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||  |||||||| |||| |  ||| |||  ||| |||||||| ||||||||||||    
T  15085760 aaaaaaaaaaagtaagctctcctctcccttcttctcttaaacttttcatccaaacaca 15085703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 15508914 - 15508983
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| |||||||||||||||| |||| | |||| |||| ||| |||||| | ||||||||||||||    
T  15508914 gaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgta 15508983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 27968927 - 27968980
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaat 149  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||| |||||||||    
T  27968927 caacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 27968980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 28091660 - 28091607
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaat 149  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||| |||||||||    
T  28091660 caacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 28101892 - 28101839
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaat 149  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||| |||||||||    
T  28101892 caacactctcttttgagtactctctctagcactcactcttttattgggtgaaat 28101839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 660
Target Start/End: Complemental strand, 31061432 - 31061363
Alignment:
Q  591 tgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||| ||||||||||  |||||| | | || ||||||||||||||||||||| ||| |||||||||||    
T  31061432 tgttcgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacaca 31061363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 426 - 479
Target Start/End: Complemental strand, 31061598 - 31061545
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttctttt 479  Q
    ||||||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttt 31061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 558
Target Start/End: Original strand, 45098250 - 45098307
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||| ||| |||||||||||||||||  ||||| |||||||||||| |||||||||||    
T  45098250 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 45098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 42183062 - 42182990
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||||||||||||| |||| ||||  ||||| ||| |||||| ||||||||||||||||  || ||||||||    
T  42183062 aacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgtaggacctacacttt 42182990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 45257546 - 45257486
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||| ||||||| |  ||||||||||||| |||||||||||||| |||||    
T  45257546 gtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaat 45257486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 45554564 - 45554636
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| || |||||||| ||||| | |||| ||||||||||| ||| |||||| || |||||||||||||    
T  45554564 gaagaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgta 45554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 1110192 - 1110267
Alignment:
Q  81 taagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| ||||| || ||||||||||||| ||||| | |||||| |||| ||| |||||| | ||||||||||||||    
T  1110192 taagaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgta 1110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 615
Target Start/End: Original strand, 1583221 - 1583272
Alignment:
Q  564 tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    |||||||| |||||||| |||||||||||| || |||||||||| |||||||    
T  1583221 tttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 1583272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 25238284 - 25238327
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttat 139  Q
    |||||||||||||| | |||||||||||||||| ||||||||||    
T  25238284 caacactctcttttaaacactttctctagcactcacttttttat 25238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 542
Target Start/End: Complemental strand, 2381223 - 2381109
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    ||||||||| ||||||| |||| || |||||| ||   || |||||| |||| ||||| || | | || ||| |||||||| |||||||||||||||||     
T  2381223 tttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtt 2381124  T
Q  528 attgaattattatat 542  Q
     ||||| ||||||||    
T  2381123 tttgaagtattatat 2381109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 1110372 - 1110312
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||| ||||||||||| | |||| || | ||| |||||| ||||||||||||||||    
T  1110372 caacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgta 1110312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 427 - 546
Target Start/End: Complemental strand, 1270515 - 1270395
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatg-tttttataaaataaattaagtg 525  Q
    ||||||||||||| |||||||||| |||||||| || |  | |||||| |||| ||||| || | | || ||| ||| ||||| | ||||||||||||||    
T  1270515 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaattaagtg 1270416  T
Q  526 tgattgaattattatatgatc 546  Q
    |  ||||| | ||||||||||    
T  1270415 tttttgaagtgttatatgatc 1270395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 9472805 - 9472837
Alignment:
Q  43 ttaattttttaattttaaccatttgatctattt 75  Q
    ||||||||||||||||| |||||||||||||||    
T  9472805 ttaattttttaattttatccatttgatctattt 9472837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 9631799 - 9631739
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||||||||||||| |||||||| ||| | || ||||||| ||| |||||    
T  9631799 gtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaat 9631739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 3e-50; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 425 - 658
Target Start/End: Complemental strand, 31543311 - 31543078
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||| ||||||||||||||||||  |||||||| || | |||||||||||||| ||||| |    | ||||||||||||||| |||||||||||||||    
T  31543311 gtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagt 31543212  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||||| ||||||| |||||| ||| ||||||| || ||||| |||||||||| | || |||||||||| ||||||||||| || |    
T  31543211 gtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccctcc 31543112  T
Q  625 catcctttcccctcctaaactttccatccaaaca 658  Q
    | ||| |||||||| |||||  ||||||||||||    
T  31543111 cctcccttcccctcttaaaccctccatccaaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 425 - 656
Target Start/End: Complemental strand, 11575645 - 11575415
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||| ||||||||||| || |||||||| || | |||||||||| ||| ||||| ||||  |||||||||||||||| |||||||||||||||    
T  11575645 gtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaagt 11575546  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    |||||| || ||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||| | |  ||||||| || ||||||||||| | ||    
T  11575545 gtgattaaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaac-cctc 11575447  T
Q  625 catcctttcccctcctaaactttccatccaaa 656  Q
    | ||| |||| ||||||||   ||||||||||    
T  11575446 cctcccttcctctcctaaatcctccatccaaa 11575415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 466 - 660
Target Start/End: Complemental strand, 41103704 - 41103508
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  41103704 tttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattgttt 41103605  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaa--tttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| || || |||||  ||||||||||| |  ||  ||||||||||||||  |||| || || ||  ||||||||||||||  ||||||||||||||    
T  41103604 taatttttttaaaaacgtttcatagtgtccataatttttaaaaacgaaaatcaaaccctcccctctcttcccctcctaaaccctccatccaaacaca 41103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 426 - 618
Target Start/End: Original strand, 1281149 - 1281341
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    ||||||||||||||||||||||||  |||||| |||| | |||||||||||||| ||||| ||   | ||||||||||||||| ||| |||||| |||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtg 1281248  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    || ||||| |||||||| ||||||||| |||||| ||| ||||||| ||||||||||||||||||||| || |||||||||| ||||| ||||    
T  1281249 tggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaactaaa 1281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 1027087 - 1026894
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||| ||||||||||| |  ||||||||  | | || ||||||||||| ||||| ||   |||||||| |||||||| |||||||||||||||    
T  1027087 gtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagt 1026989  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
     |||||||| ||||||||||||||||||||||||| ||| ||||||| | | ||||||||||||||||| ||||||||||||| |||||||||||    
T  1026988 atgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaac 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 425 - 613
Target Start/End: Complemental strand, 9718718 - 9718530
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||| |||||||| ||   |||||||||||||| ||||| |  | ||||||||||| ||||| ||||||  ||||| |    
T  9718718 gtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcattaatt 9718619  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaa 613  Q
    ||||||||| ||||||||||| ||||||||||||| |||  |||||| |||||||  |||||||||||| || |||||||||| |||||    
T  9718618 gtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaa 9718530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 466 - 660
Target Start/End: Original strand, 16652995 - 16653189
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| ||   |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||| ||| |    
T  16652995 tttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgttaatatgt 16653094  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||| || ||||| |||||||| ||| || |||||||||| ||||| ||||| ||  | ||| |||||||| |||||  | ||||||||||||    
T  16653095 taactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacaca 16653189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 492 - 620
Target Start/End: Complemental strand, 37923250 - 37923122
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||| |||| || |||||||||||| |||||||||||| ||||||||||  |||||||| ||||||||||    
T  37923250 ctatataacatgtttttctaaaataaattaagtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaaaaaacatttcatagt 37923151  T
Q  592 gttcgcaatttaaaaacgaaaagtaaact 620  Q
    ||||  |||||||||| ||||||||||||    
T  37923150 gttcataatttaaaaatgaaaagtaaact 37923122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 492 - 671
Target Start/End: Original strand, 36308914 - 36309094
Alignment:
Q  492 ctatataacatgtttt-tataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatag 590  Q
    |||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||| || |||| | |||| |||||||| |     
T  36308914 ctatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgttaatatgtttacttttaaaaatatatttcacaa 36309013  T
Q  591 tgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattcttaaggac 671  Q
    ||| || |||||||| | ||||||||||| || || ||| ||||||||||||||  |||||||||||| | |||| |||||    
T  36309014 tgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacatactcttgaggac 36309094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 466 - 660
Target Start/End: Original strand, 11785572 - 11785766
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||||||| ||||| |  | ||||||||||||||||| ||||||| ||||| || ||||||| ||||||||| | ||||||||||||| |||      
T  11785572 tttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgttaatatgc 11785671  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||| ||||||||||||||||| ||| || |||||||||| |||||  |||| || || ||  || |||||||||||  ||||||||||||||    
T  11785672 taactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctcccttctcttaccctcctaaaccctccatccaaacaca 11785766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 425 - 661
Target Start/End: Complemental strand, 30479956 - 30479720
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| |||   || ||||  || | |||| ||||||||| ||||  |||  ||||||  ||||||||| |||||||||| ||||    
T  30479956 gtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatcaagt 30479857  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||| ||| |||||||  ||| ||| ||||||| |||||| | ||||||||||||  | |||||||||| ||||||| |||||| |    
T  30479856 gtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactctcc 30479757  T
Q  625 catcctttcccctcctaaactttccatccaaacacat 661  Q
    | ||| | |||||||||||   |||||||||||||||    
T  30479756 cctccatccccctcctaaatcctccatccaaacacat 30479720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 618
Target Start/End: Original strand, 11033424 - 11033616
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||| ||   |||||||| |  | |||||||||||||| ||||| ||   ||||||| ||||||||| |||||||||||| ||    
T  11033424 gtgtttggattgagggtttagaagaggaagggagggg--ggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgt 11033521  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttatt-aaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    |||||||||| |||||||||||||||||||||||| ||| |||| || || |||||| |||||||| | |||  |||||||||  ||||||||||    
T  11033522 gtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaagtaaa 11033616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 425 - 607
Target Start/End: Complemental strand, 7503193 - 7503011
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||| ||| |||||  | |||||| || | |||||||||| ||| ||||| |     |||||||||||||||| |||||||||||||||    
T  7503193 gtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagt 7503094  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaa 607  Q
    |||||| || ||||||||||| ||||||||||||| ||| ||||||| ||| |||| |||||||||| || | ||||||||||    
T  7503093 gtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaa 7503011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 471 - 660
Target Start/End: Original strand, 31738474 - 31738663
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    |||| |||| ||||| |||  ||||||||||||||| | || |||||||||||||| |||||| |||||||||||| |||||||||||| ||| ||||||    
T  31738474 tttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaact 31738573  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
      | ||||||||||| ||||||| || |||||||||| ||||  ||||| || || |   ||||||||||||||  ||||||||||||||    
T  31738574 cttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacaca 31738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 429 - 618
Target Start/End: Original strand, 13404985 - 13405178
Alignment:
Q  429 ttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtga 528  Q
    |||||||||||||||||||||  |||||| | ||  | ||||||||||||| ||||| |||  ||||||||||||||||| ||||||||||||  | | |    
T  13404985 ttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaattatatataa 13405084  T
Q  529 ttgaattattatatgatcgtttatcatgttattatttta----acttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    ||||||||||||||||||||||||||||||| ||  |||    |||| | |||||||||||  || ||| || |||||||||| ||||||||||    
T  13405085 ttgaattattatatgatcgtttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaagtaaa 13405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 425 - 612
Target Start/End: Original strand, 28083747 - 28083934
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||| |||||||||||||||||||  |||||||||||   |||  ||||||||| ||||| |||  | ||||||||||||| | |||||||||||||||    
T  28083747 gtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagt 28083846  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaa 612  Q
    ||||||| | ||||||||||| ||||||||||||   || ||||||  |||||||| || ||||||| | || |||||||||| ||||    
T  28083847 gtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 607
Target Start/End: Original strand, 2248457 - 2248639
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| ||||||||||  |||||||| ||   || | ||| ||||| ||||| ||  | |||||||||||||||| |||||||||| ||||    
T  2248457 gtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaatcaagt 2248556  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaa 607  Q
    ||||||| | |||||||||| ||||||  |||||| ||  ||||||| | ||||||||||||||||||| || ||||||||||    
T  2248557 gtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaa 2248639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 433 - 660
Target Start/End: Complemental strand, 3727086 - 3726867
Alignment:
Q  433 attgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattga 532  Q
    ||||||| ||||||||| ||||||||| ||   |||||||||||||| || || |||  ||||||||||||||||| ||||||||||||||  |||||||    
T  3727086 attgaggatttaggagggaaagggaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattga 3726987  T
Q  533 attattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatccttt 632  Q
    | |||||||||| |||||||||||        ||||||  |||||||| ||| ||| |||| || |||||||||| ||||| |||||  | |  ||| ||    
T  3726986 aatattatatgaccgtttatcatg--------ttaactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaaccgtcctttccctt 3726895  T
Q  633 cccctcctaaactttccatccaaacaca 660  Q
    ||||||||||||  ||||||||||||||    
T  3726894 cccctcctaaaccctccatccaaacaca 3726867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 492 - 613
Target Start/End: Original strand, 6315134 - 6315255
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| |||| ||| |||| || || ||||| ||||||||||    
T  6315134 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagt 6315233  T
Q  592 gttcgcaatttaaaaacgaaaa 613  Q
    || || | |||||||| |||||    
T  6315234 gtccgtattttaaaaatgaaaa 6315255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 466 - 660
Target Start/End: Original strand, 37032425 - 37032620
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||| ||||||||| ||||| |||  ||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||| ||| ||| |    
T  37032425 tttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatcttaatatgt 37032524  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaa--tttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||| |||||||| | ||| |||||| || ||  ||| ||||  |||||||||| |||||  ||||| | |||||||||  || |||||||||||    
T  37032525 taactttttaaaaaacacttcctagtgtccgtaattttttaaaaaaaaaagtaaacccttcccaccttt-ctctcctaaaccctcaatccaaacaca 37032620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 428 - 619
Target Start/End: Original strand, 30664370 - 30664560
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    |||||||||||||||||||  |||| |  || | |||||||| ||||||||| |||||  ||  || ||||||||||||||  |||||||||||||||||    
T  30664370 tttggattgagggtttagggagaaatga-agtaaatgatttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtg 30664468  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||||| |||||||| | |||||||||| ||| ||| ||||||| |||||||||||||  || ||| || |||||||||  ||||| |||||    
T  30664469 attgaagtattatataaccgtttatcatattaatatgttaactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaataaac 30664560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 493 - 619
Target Start/End: Complemental strand, 29358510 - 29358385
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||| || ||||||||||||| ||||||    
T  29358510 tatataacatatttttctagaataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaa-tttttaaaaaatattttatagtg 29358412  T
Q  593 ttcgcaatttaaaaacgaaaagtaaac 619  Q
    | || ||||||||||  ||||||||||    
T  29358411 tccgtaatttaaaaataaaaagtaaac 29358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 580
Target Start/End: Complemental strand, 40990422 - 40990268
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||| |||||   |||||||||||   |||  ||||||||| ||||| ||   ||||||||||||||| | |||||||||||||||    
T  40990422 gtgtttggattgagggtt-aggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaagt 40990324  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaa 580  Q
     |||||||| ||||||||||||| ||||||||||| ||| ||||||  ||||||||    
T  40990323 ctgattgaagtattatatgatcgcttatcatgttaatatgttaactctttaaaaaa 40990268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 7979145 - 7979339
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||| ||   |||||||  ||   |||||||||||||| ||||| ||   ||||||||||||||||| |||||||||| ||||    
T  7979145 gtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 7979244  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |  |||||| |||||||||||  |||||||||||| ||  ||||  | |||| ||| ||||||  |||| || |||||||||| |||||||||||    
T  7979245 gcaattgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaagtaaac 7979339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 617
Target Start/End: Complemental strand, 12022382 - 12022190
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  || ||||| || |  | |||||| |||| ||||| ||   | || ||| |||||||| |||||||||||||||    
T  12022382 gtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaattaagt 12022283  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    ||  ||||| |||||||||||| ||||||||||| ||| || || ||  ||||||  |||| ||| |||||| |||||||||| |||||||||    
T  12022282 gtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaa 12022190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 4247680 - 4247563
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    |||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || ||| ||||||| ||||||||||||| | ||||  || |||    
T  4247680 atgtttttttaaaataaattaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagtg-ccgtaat 4247582  T
Q  601 ttaaaaacgaaaagtaaac 619  Q
    |||||||  ||||||||||    
T  4247581 ttaaaaataaaaagtaaac 4247563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 512 - 666
Target Start/End: Original strand, 16024246 - 16024399
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaa 611  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||| ||| || || ||  ||||||  |||| ||| ||| || |||||||||| |||    
T  16024246 aaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa-gaa 16024344  T
Q  612 aagtaaactcttccatcctttcccctcctaaactttccatccaaacacattctta 666  Q
    ||||||||||| || ||| |||||||||||||   |||||||||||||| |||||    
T  16024345 aagtaaactctcccctcccttcccctcctaaatcctccatccaaacacactctta 16024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 493 - 557
Target Start/End: Complemental strand, 42650507 - 42650443
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgt 557  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  42650507 tatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgt 42650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 43732684 - 43732927
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttat--------aaaata 516  Q
    |||||||||||||||||||||||||  |||||||  || || | |||||| |||| ||||| || | | || ||| |||||||| |        ||||||    
T  43732684 gtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaaaaaata 43732783  T
Q  517 aattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaat-atttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    ||||||||||  ||||| |||||||||||| |||||||| || ||| || || || | ||||||| |||| ||| ||| || |||||||||| |||||||    
T  43732784 aattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattt-tcaaaaaatcattttataatgtccgtaatttaaaaaagaaaagt 43732882  T
Q  616 aaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||| || || ||| ||||||||||||||  ||||||||||||||    
T  43732883 aaaccctcccctcccttcccctcctaaaccctccatccaaacaca 43732927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 467 - 617
Target Start/End: Complemental strand, 24243244 - 24243096
Alignment:
Q  467 ttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattatttt 566  Q
    ||||||| ||||||||||| |||  | |||| | || ||||| | |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||     
T  24243244 ttactttccttttctaaattacagacaatatgagatctttttttcaaattaattaagtgtgattgaagtattatatgatcatttatcatgttattatttc 24243145  T
Q  567 aacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    || || |||||| | |||| |||||| ||| ||||| |||| |||||||||    
T  24243144 aa-tttttaaaagacattttatagtg-tcgtaatttcaaaatgaaaagtaa 24243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 519 - 660
Target Start/End: Complemental strand, 29691067 - 29690926
Alignment:
Q  519 ttaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    ||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| || ||||||||||| |||| |  | |  ||| ||| ||||||||||    
T  29691067 ttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgttaacttttttaaaaatatttcctagtatcagtatgttataaatgaaaagtaaa 29690968  T
Q  619 ctcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||  | ||  ||  ||||||||||||| ||||||||||||    
T  29690967 ctctctcgtctcttttcctcctaaacttttcatccaaacaca 29690926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 426 - 580
Target Start/End: Original strand, 33922531 - 33922680
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    |||||||||||||||||||||| |  ||||||| ||    |||||||||||||| |||||  |   ||||||||||| ||||| ||||||||||| |||     
T  33922531 tgtttggattgagggtttaggaagggaagggag-ag----tttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagta 33922625  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaa 580  Q
    |||||||| ||| ||||||| |||||||||| || ||| ||||||| ||||||||    
T  33922626 tgattgaagtatgatatgattgtttatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 660
Target Start/End: Original strand, 34634260 - 34634383
Alignment:
Q  537 ttatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccc 636  Q
    |||||| || |||||  |||||| ||| ||||||| |||||| |||||||||||||| || ||||||||||  |||| | ||| ||  ||||| ||||||    
T  34634260 ttatattattgtttacaatgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctcacatcccttcccc 34634359  T
Q  637 tcctaaactttccatccaaacaca 660  Q
    ||||||||| ||||||||||||||    
T  34634360 tcctaaactctccatccaaacaca 34634383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 551
Target Start/End: Original strand, 10028115 - 10028241
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||| ||||||||||||||  |  ||||| ||   |||||||||||||| ||||| ||   | ||||||||| ||||| |||||||||||||||    
T  10028115 gtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaagt 10028214  T
Q  525 gtgattgaattattatatgatcgttta 551  Q
    ||| ||||| | |||||||||||||||    
T  10028215 gtggttgaagtcttatatgatcgttta 10028241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 35689651 - 35689574
Alignment:
Q  99 cactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatg 176  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||||   ||||||||||| ||||||    
T  35689651 cactctcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatg 35689574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 35689490 - 35689549
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||||||||| ||||||||||| |||||||||| || |||||||||||||    
T  35689490 aacactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgta 35689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 23143002 - 23142937
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaat 153  Q
    |||||||  |||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  23143002 aatgttaggaacactcttttttgagcactctctcaagcacttacttttttattgggtgaaatcaat 23142937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 425 - 669
Target Start/End: Original strand, 30365135 - 30365379
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||| || ||||| ||   || ||||||  ||| ||||| || | | | |||| || ||||| || ||||||||||||    
T  30365135 gtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaattaagt 30365234  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||  ||||| | |||||| ||| ||||||||||| ||| || || ||  ||||||  |||||||| |||  | |||||||||| |||||| || | || |    
T  30365235 gtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaagccctcc 30365334  T
Q  625 catcctttcccctcctaaactttccatccaaacacattcttaagg 669  Q
    | ||| || |||| |||||   ||||||||||||||  |||||||    
T  30365335 cctcccttacccttctaaatcctccatccaaacacacccttaagg 30365379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 591
Target Start/End: Complemental strand, 35694915 - 35694828
Alignment:
Q  504 tttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt-attattttaacttattaaaaaatatttcatagt 591  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||| || || || | ||| ||||||| |||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatcgtt-attatatttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 16911023 - 16911094
Alignment:
Q  279 ttttaatctaaaagtcaaaattaatggtacaccgatgagagacttagttaaaccctcatcctataatccacc 350  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||| || | |||||| |||| ||||||||    
T  16911023 ttttaatctaaaagtcaaaattgatggtacaccggtgagggacttaattgagccctcaccctagaatccacc 16911094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 7599602 - 7599533
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| ||||||||| |||||| |||| |||||||||| |||| |||||| || |||||||||||||    
T  7599602 gaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgta 7599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 495 - 571
Target Start/End: Original strand, 27487065 - 27487141
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaactt 571  Q
    ||||| |||||||| |||||  |||||||||| |||||| |||||||||||| ||||||||||| || ||| |||||    
T  27487065 tataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgttgttctttcaactt 27487141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 558
Target Start/End: Complemental strand, 30581964 - 30581916
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||||||    
T  30581964 taaaacaaattaagtgtgattgaagtattatatgatcatttatcatgtt 30581916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 38198208 - 38198148
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||| |||||| ||||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  38198208 ttttttaaaatgaattaagtgtgattgaagtattatatgatcatatatcatgttgttattt 38198148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 1206001 - 1205928
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||||||| |||||| |||| ||| ||||||| ||| |||||| | ||||||||||||||| || ||||||||    
T  1206001 caacactctattttgaacactctctttagcactcactcttttattgagtgaaatcaatgtaagacctacacttt 1205928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 546
Target Start/End: Complemental strand, 8672033 - 8671912
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||| ||||| |||  |||| ||| ||||| ||| |||| |||| ||||| ||||   || ||| |||| ||| |||||||||||||||    
T  8672033 gtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaataaattaagt 8671934  T
Q  525 gtgattgaattattatatgatc 546  Q
     |  ||||| ||||||||||||    
T  8671933 atttttgaagtattatatgatc 8671912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 9933329 - 9933244
Alignment:
Q  575 aaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||||| | | |||||| |||||||||   |||||| || |||||| ||||||| |||||||||| ||| |||||||||||    
T  9933329 aaaaaatattttacattgttcgtaatttaaaatataaaagtgaattcttccctcctttctcctcctaaaccttcaatccaaacaca 9933244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 660
Target Start/End: Complemental strand, 30365219 - 30365134
Alignment:
Q  575 aaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||||| ||  |||||| ||||||||||  |||||| |||||| || ||||||| ||||||||||  || |||||||||||    
T  30365219 aaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacaca 30365134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 34303466 - 34303523
Alignment:
Q  118 tctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaat 175  Q
    ||||||||||| ||| |||||| ||||||||||||||||| || |||||||| |||||    
T  34303466 tctctagcactaactcttttattgggtgaaatcaatgtaagacctacactttgaaaat 34303523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 7394700 - 7394640
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||||||||||||  |||||||| |||| || |||||| |||| |||||    
T  7394700 gtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaat 7394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 8815146 - 8815206
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||||||||||  ||| |||| ||||| ||||||||||||| |||||    
T  8815146 gtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaat 8815206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 43732926 - 43732866
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||||||||||||||  |||||||| || | |||||||||||||| |||||    
T  43732926 gtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 43732866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 9933245 - 9933440
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttat-aaaataaattaag 523  Q
    ||||||||||||| |||||||||||| || |||||  |  ||| |||||| | || ||||| || | | || ||| || ||||| | |||||||||||||    
T  9933245 gtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataaattaag 9933344  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    | |  ||||| |||||||||||| ||||||||||| ||| || || || || ||||  |||| ||| ||| |  | |||||||| |||||||||||    
T  9933345 tatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaaac 9933440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 475
Target Start/End: Complemental strand, 11033646 - 11033607
Alignment:
Q  436 gagggtttaggaggaaaagggaggagatgatttacttttc 475  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  11033646 gagggtttaggaggagaagggaggagaagatttacttttc 11033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 16838152 - 16838203
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||||| ||||||||||||||||| |||||||||||| | || |||||||||    
T  16838152 taaaatgaattaagtgtgattgaaatattatatgatcatataccatgttatt 16838203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 27483636 - 27483718
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaa 578  Q
    |||| |||||||| | |||||||| |||||| |||||| |||||||||||  ||||||||| | || ||| ||||| ||||||    
T  27483636 ataaaatgttttttttaaataaataaagtgttattgaagtattatatgataatttatcatgctgttctttgaactttttaaaa 27483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 181
Target Start/End: Original strand, 28211885 - 28211977
Alignment:
Q  88 aatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||||| ||||||||||||||||||| | | |||| || | ||  |||||| ||||||||||||||||  || || |||||||||||| ||||    
T  28211885 aatgttagcaacactctcttttgagcattatttctaacattcac-attttattgggtgaaatcaatgtaggacctatactttaaaaatggaacc 28211977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 501 - 606
Target Start/End: Complemental strand, 40633152 - 40633047
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaat 600  Q
    ||||| || |||||||||||||||||  ||||| |||||||  ||| ||||||||||| ||| || || ||  |||||| ||||| ||| ||| || |||    
T  40633152 atgttgttttaaaataaattaagtgtttttgaaatattatacaatcatttatcatgttgttaattcaattttctaaaaattattttataatgtccgtaat 40633053  T
Q  601 ttaaaa 606  Q
    ||||||    
T  40633052 ttaaaa 40633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 1205836 - 1205896
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||||||||||||||||||| ||| ||||||| ||| ||||||  ||| |||| ||||||    
T  1205836 caacactctcttttgagcactctctttagcactcactcttttattaggtaaaattaatgta 1205896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 658
Target Start/End: Complemental strand, 1281209 - 1281149
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    |||||||||| ||||||||||| ||  ||||| ||||||||||||||  || |||||||||    
T  1281209 aatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 598 - 666
Target Start/End: Complemental strand, 10028176 - 10028108
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacacattctta 666  Q
    |||||||||| |||||||||| |||  | |||| |||||||||||||  || |||||||||||| ||||    
T  10028176 aatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaaccctcgatccaaacacatcctta 10028108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 510 - 558
Target Start/End: Original strand, 26167846 - 26167894
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgtt 558  Q
    |||||||||| ||| || |||||| |||||||||||| |||||||||||    
T  26167846 taaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 28414052 - 28413980
Alignment:
Q  84 gaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||| || |||||||| ||||| | |||| |||||||| || ||||||||||  | |||||||||||||    
T  28414052 gaagaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgta 28413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 502 - 542
Target Start/End: Original strand, 34633819 - 34633859
Alignment:
Q  502 tgtttttataaaataaattaagtgtgattgaattattatat 542  Q
    ||||||| |||||||||| ||||||||||||| ||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattatat 34633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 44076309 - 44076261
Alignment:
Q  30 accataaattttgttaatttttt-aattttaaccatttgatctatttat 77  Q
    ||||||||| || |||||||||| ||||| |||||||||||||||||||    
T  44076309 accataaatcttattaatttttttaatttaaaccatttgatctatttat 44076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 425 - 617
Target Start/End: Original strand, 6589 - 6780
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||| | |||||||||| |||||||| || | |||||||||||||| ||||| |||  ||||||||| |||| || ||||||||||| |||    
T  6589 gtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagt 6688  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    ||||||||| |||||||||||||||||| |||||| |||||||| || || |||||||||||||||||| || ||||||||||||||||||||    
T  6689 gtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaa 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 7e-48; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 5585474 - 5585305
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| ||| ||| |||||||| ||||||||||    
T  5585474 ctatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaaacatttcatagt 5585375  T
Q  592 gttcgcaatttaaaaacg-aaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||| |||||||||| | |||||||||||||||||| | ||||||||||||||  ||||||||||||||    
T  5585374 gttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacaca 5585305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 428 - 656
Target Start/End: Original strand, 33235959 - 33236186
Alignment:
Q  428 tttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtg 527  Q
    |||||||||||| |||||| ||| |||||||  ||   |||||||||||||| ||||| ||   ||||||||||||||||| ||||||||||||||  ||    
T  33235959 tttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagactg 33236058  T
Q  528 attgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccat 627  Q
    ||||||  |||||||||| ||||||||||||| ||| ||||||| |||||||| |||||||||||| || |||||||||| ||||||||| |||| || |    
T  33236059 attgaagaattatatgattgtttatcatgttaatatgttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaagtaatctctcccct 33236157  T
Q  628 cctttcccctcctaaactttccatccaaa 656  Q
    ||||||| ||| |||||| ||||||||||    
T  33236158 cctttcctctcataaactctccatccaaa 33236186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 425 - 659
Target Start/End: Complemental strand, 19278276 - 19278039
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||| ||||||||||  |||||||| || | |||| ||||||||| ||||| ||   ||||||||||||||||| ||||||||||| |||    
T  19278276 gtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaatttagt 19278178  T
Q  525 gtgattgaattattatatgatcgtttatcatgtta----ttattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaact 620  Q
     |||||||| ||| |||||||||||||||||||||     ||| | ||||| ||||||||||||| |||||||  | |||||||||| ||||||||||||    
T  19278177 ctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaagtaaact 19278078  T
Q  621 ct-tccatcctttcccctcctaaactttccatccaaacac 659  Q
    || ||| ||| ||||||||||||||  |||||||||||||    
T  19278077 ctctccttcc-ttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 425 - 625
Target Start/End: Complemental strand, 2892842 - 2892643
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||| || |||||||| | |||  |||||||| ||  ||||||||||||||| ||||  ||   |||||||||| |||||| ||||||||||| |||    
T  2892842 gtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagt 2892743  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||| || ||||||| ||| ||||||||| |||||    
T  2892742 gtgattgaaatattatatgattgtttatcatgttattattttaa-tttttaaaaaatatctcatagtgtgcgtaatttaacaacaaaaagtaaattcttc 2892644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 426 - 618
Target Start/End: Complemental strand, 16738233 - 16738042
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtg 525  Q
    |||||||||||||||||||||| |  |||| ||| ||   |||||||||||||| ||||| |||   ||||||| |||||||| ||||||||| ||||||    
T  16738233 tgtttggattgagggtttaggatgggaagg-aggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtg 16738135  T
Q  526 tgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
    | ||| || |||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| | |  |||||||||||||||||||||    
T  16738134 ttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaa 16738042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 30487544 - 30487310
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||| ||||||||||||||||||  |||||||  || | |||| |||| |||| ||||  ||   |||||||||||||||||||||||||||| ||||    
T  30487544 gtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaagt 30487445  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||| || ||||||||||||| ||| || |||| |||||| | |||||||| || ||  ||||||| || ||||||| ||| || |    
T  30487444 gtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactg-tcctaatttaacaatgaaaagtgaaccctcc 30487346  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  ||||||||||||||    
T  30487345 cctcccttcccctcctaaaccctccatccaaacaca 30487310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 425 - 619
Target Start/End: Complemental strand, 21607083 - 21606889
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||| |||  ||   ||||| |||| ||| ||||| |||| |||||| | |||||||| |||||||||| ||||    
T  21607083 gtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaagt 21606984  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    |||| |||| ||||||| ||||||||||||||||| ||| ||||||| ||| |||| |||||||||| | || |||||||||| |||||||||||    
T  21606983 gtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaac 21606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 425 - 617
Target Start/End: Complemental strand, 4097752 - 4097559
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttat-aaaataaattaag 523  Q
    |||||||||||||||||||| ||||  ||||||||  | | || ||||||||||| ||||| ||   | ||||||||| |||||   |||||||||||||    
T  4097752 gtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaattaag 4097653  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaa 617  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| |||||| ||||| || ||||||||||  ||||||||    
T  4097652 tgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaagtaa 4097559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 14515478 - 14515711
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| || | |||  ||||||||| ||||| ||   ||| |||  |||||| | |||||||||||||||    
T  14515478 gtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagata--atgtttctctaaaataaattaagt 14515575  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    |||| |||| |||||||| ||| |||||||||||  ||| ||||||  | ||||||||||| |||||||||  |||||||||| ||||  ||||| || |    
T  14515576 gtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaaccctcc 14515675  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | | | ||||||||||||||  ||||||||||||||    
T  14515676 ctttccttcccctcctaaaccctccatccaaacaca 14515711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 425 - 660
Target Start/End: Complemental strand, 9719269 - 9719035
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||| ||||  ||| |||| |  | |||| ||||||||| |||||  |   |||||||||||| |||| |||| |||||| |||    
T  9719269 gtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaatttagt 9719171  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| ||||||||||| ||||||||  ||| ||| ||||||| |||||||| ||| |||||||| || |||||||||| ||||| ||||  || |    
T  9719170 gtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcctcc 9719071  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| ||||||||||||||  || |||||||||||    
T  9719070 cctcccttcccctcctaaaccctcaatccaaacaca 9719035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 494 - 660
Target Start/End: Complemental strand, 9721307 - 9721142
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    ||||||||||||||| |||| |||| | |||||||||||| ||||||||||| ||||||||  ||| ||| ||||||| |||||||| ||| ||||||||    
T  9721307 atataacatgttttt-taaattaaagttagtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgt 9721209  T
Q  594 tcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
     || |||||||||| ||||| ||||| || || ||| |||||||||||||| ||| |||||||||||    
T  9721208 ccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacaca 9721142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 425 - 618
Target Start/End: Complemental strand, 30850151 - 30849960
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||||| |||| || | ||   ||||||||| | || ||||| |  |  ||||||| |||||||| ||||| ||||| |||    
T  30850151 gtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaatttagt 30850052  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaa 618  Q
     | |||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||| | || ||||||||||||||| |||||    
T  30850051 ataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaa 30849960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 425 - 615
Target Start/End: Original strand, 31849115 - 31849305
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||| |||||||||||||| ||||  |||||||| || | |||| ||||||||| ||||  |||  ||||||||||| ||||| |||||||||| ||||    
T  31849115 gtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagt 31849214  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    ||||||||| |||||||| || |||||||| |||| ||| |||| || |||||| | |||| ||||||| || |||||||||| |||||||    
T  31849215 gtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagt 31849305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 1390324 - 1390559
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgttt-ttataaaataaattaag 523  Q
    |||||||||| ||||||||| ||||  ||| |  ||||  ||||| |||||||||  |||| ||   |||| |||||||||| || ||||||||||||||    
T  1390324 gtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaag 1390423  T
Q  524 tgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt-aaactct 622  Q
    | |||||||| |||||| ||||| |||||||||||| ||| ||||||| |||||||||||||||||||||  | |||||||||| ||||||| |||| |     
T  1390424 tttgattgaaatattat-tgatcatttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaagtaaaacccc 1390522  T
Q  623 tccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||| ||| ||||||||||||||  | ||||||||||||    
T  1390523 tcc-tccattcccctcctaaacccttcatccaaacaca 1390559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 493 - 622
Target Start/End: Original strand, 34176408 - 34176537
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||||||||| |||||||||| ||||||||||| | ||||||| |||||||||| |||||| ||| |||||||   ||||||||||||||||||    
T  34176408 tatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaatatttcatagtg 34176507  T
Q  593 ttcgcaatttaaaaacgaaaagtaaactct 622  Q
    | || |||||||||| ||||| ||||||||    
T  34176508 tccgtaatttaaaaatgaaaactaaactct 34176537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 466 - 622
Target Start/End: Complemental strand, 2893044 - 2892885
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgt-ttttataaaataaattaa--gtgtgattgaattattatatgatcgtttatcatgttatta 562  Q
    |||||||||||||| ||||| || | |||||||| || | |||| | ||||||||| |  ||||||||||| ||||||||||||||||||||||||||||    
T  2893044 tttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatcatgttatta 2892945  T
Q  563 ttttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactct 622  Q
    |||||  || ||| ||||||||||||||||| || ||||||||||| |||||||| ||||    
T  2892944 ttttactttcttacaaaatatttcatagtgtgcgtaatttaaaaacaaaaagtaagctct 2892885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 10818234 - 10818456
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||| |||  |||| ||||||||| ||||| ||   | ||||||||||||||             || |    
T  10818234 gtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt-------------aaat 10818320  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| |||||||||||| |||||||||||| ||| ||||  | |||||||| |||||||||||| || |||||||||| ||||||||||| || |    
T  10818321 gtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcc 10818420  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
    | ||| | ||||||||||||| || |||||||||||    
T  10818421 cctccctacccctcctaaactctcaatccaaacaca 10818456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 493 - 660
Target Start/End: Original strand, 1300692 - 1300860
Alignment:
Q  493 tatataacatgtttttataaa-ataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagt 591  Q
    |||||||||| ||||| | || |||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||||| ||| ||||||||||||| |    
T  1300692 tatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatcaggttaatatgttaactttttataaaatatttcatatt 1300791  T
Q  592 gttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    || || |||||||||| ||||||||||| || || ||| |||  || | ||||  ||||||||||||||    
T  1300792 gtccgtaatttaaaaatgaaaagtaaaccctcccctccattcatcttccaaaccctccatccaaacaca 1300860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 493 - 593
Target Start/End: Original strand, 13583792 - 13583892
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtg 592  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||||  || |||| || |||||||| |||||||||||    
T  13583792 tatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaaaaacatttcatagtg 13583891  T
Q  593 t 593  Q
    |    
T  13583892 t 13583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 492 - 579
Target Start/End: Original strand, 25741479 - 25741566
Alignment:
Q  492 ctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaa 579  Q
    ||||||||||||||||| |||||||||||||| |||| |||| | ||||||||||||||||||| ||||||| ||||||| |||||||    
T  25741479 ctatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaactttttaaaaa 25741566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 492 - 618
Target Start/End: Original strand, 1395707 - 1395834
Alignment:
Q  492 ctatataacatgtttt-tataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatag 590  Q
    |||| ||||||||||| |||||||||||||||||||||||||| || || |||||| ||||||||| || ||| |||| || |||||||| |||  | ||    
T  1395707 ctatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaattttttaaaaaacattctacag 1395806  T
Q  591 tgttcgcaatttaaaaacgaaaagtaaa 618  Q
    |||| | |||||||||| ||||||||||    
T  1395807 tgttagtaatttaaaaatgaaaagtaaa 1395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 434 - 533
Target Start/End: Complemental strand, 6034302 - 6034203
Alignment:
Q  434 ttgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaa 533  Q
    |||||||||| ||||| |||||||  ||| |||||||||||||||| |||||  ||  || |||||||||||||| ||||||||||||||||||||||||    
T  6034302 ttgagggtttcggagggaaagggaaaagaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaa 6034203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 425 - 559
Target Start/End: Complemental strand, 12811219 - 12811086
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    ||||||||||||||||||||||| |  ||| |||| || |  ||||||||||| | ||||| | |  |||||||| |||||||| |||||||||||||||    
T  12811219 gtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaattaagt 12811120  T
Q  525 gtgattgaattattatatgatcgtttatcatgtta 559  Q
    ||||||||| ||  ||||||| |||||||||||||    
T  12811119 gtgattgaagta-gatatgattgtttatcatgtta 12811086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 10061047 - 10060948
Alignment:
Q  82 aagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    |||| |||| ||| ||||||||||||||||||||| |||||| |||| |||||||||| |||||| |||||||||  || |||||||| |||||| ||||    
T  10061047 aagaggaatattagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacc 10060948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 350
Target Start/End: Original strand, 13084825 - 13084927
Alignment:
Q  248 gcggtaatgaatatgcatattgtgtgaatcattttaatctaaaagtcaaaattaatggtacaccgatgagagacttagttaaaccctcatcctataatcc 347  Q
    ||||||||||| ||| | ||| ||||| || |||||||||||| |||||| ||| |||||||||| |||||||||||||| |||||||| |||| ||| |    
T  13084825 gcggtaatgaacatggaaattatgtgagtctttttaatctaaaggtcaaagttagtggtacaccggtgagagacttagttgaaccctcaccctagaattc 13084924  T
Q  348 acc 350  Q
    |||    
T  13084925 acc 13084927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 660
Target Start/End: Original strand, 33041475 - 33041692
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||| |||||||||||   || ||||| ||  ||||| ||||| ||| ||||| | |  ||||||||  ||||||| |||||||||||||||    
T  33041475 gtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaagt 33041574  T
Q  525 gtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttc 624  Q
    ||||||||| | |||        |||||||||||| ||| ||||||| |||||||| |||||||||| | || ||||||||||  |||| |||| ||       
T  33041575 gtgattgaagtgtta--------tttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaa-tc--- 33041662  T
Q  625 catcctttcccctcctaaactttccatccaaacaca 660  Q
          ||||||||||||||||||||||||||||||    
T  33041663 ------ttcccctcctaaactttccatccaaacaca 33041692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 492 - 612
Target Start/End: Complemental strand, 10348971 - 10348850
Alignment:
Q  492 ctatataacatgt-ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatag 590  Q
    ||||||||||||| |||| |||||||| | ||||| ||||||| |||||||| |||||||||| | ||| ||| ||||||| |||||| ||||||||||     
T  10348971 ctatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaactttttaaaagatatttcatat 10348872  T
Q  591 tgttcgcaatttaaaaacgaaa 612  Q
    | | || |||||||||| ||||    
T  10348871 tatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 19090402 - 19090326
Alignment:
Q  80 ataagaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||| ||||| || ||||||||||||||||||||| ||||||||||  ||| |||||| ||||||||||||||||    
T  19090402 ataagaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 19090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 492 - 579
Target Start/End: Original strand, 25747405 - 25747493
Alignment:
Q  492 ctatataacatgtttttat-aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaa 579  Q
    ||||||||||||||||| | ||||| ||||||  |||| |||| | ||||||||||||||||||||||||||| ||||||| |||||||    
T  25747405 ctatataacatgttttttttaaaatcaattaaacgtgactgaagttttatatgatcgtttatcatgttattatattaactttttaaaaa 25747493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 622
Target Start/End: Original strand, 31798923 - 31799123
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataa---aataaatta 521  Q
    |||||||||||||||||||||||||| ||| |||||||||| |  ||||| |||| ||||| || | | || ||| |||||||| |     ||||||  |    
T  31798923 gtgtttggattgagggtttaggaggataagagaggagatgactcgcttttattttttaaattacgagcaatgtaaaatgttttttttttttaataaaaaa 31799022  T
Q  522 agtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactc 621  Q
    | |||  ||||| |||||||||||| ||||||||||| ||| || || || | ||||| ||||| ||| | | || |||||||||| |||||||||||||    
T  31799023 aatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaaactc 31799122  T
Q  622 t 622  Q
    |    
T  31799123 t 31799123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 542
Target Start/End: Original strand, 2893635 - 2893752
Alignment:
Q  425 gtgtttggattgagggtttagga--ggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaa 522  Q
    ||||||||||||||||||| |||  ||||| | | |||||   |||||||||| ||| ||||  |||  ||||||||||||||||| |||||||||||||    
T  2893635 gtgtttggattgagggtttgggaagggaaatgagcggagag--tttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaa 2893732  T
Q  523 gtgtgattgaattattatat 542  Q
    ||||||||||  ||||||||    
T  2893733 gtgtgattgatgtattatat 2893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 32926737 - 32926786
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgttatt 32926786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 535 - 619
Target Start/End: Original strand, 2900025 - 2900109
Alignment:
Q  535 tattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    ||||||||||| ||||||||||||| ||| ||||||| ||| |||| ||||||||||||    |||||||||| |||||||||||    
T  2900025 tattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaac 2900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 5310520 - 5310448
Alignment:
Q  280 tttaatctaaaagtcaaaattaatggtacaccgatgagagacttagttaaaccctcatcctataatccaccca 352  Q
    |||||| |||||||||| |||||||||||| ||||||| |||||| || | ||||||||||| ||||||||||    
T  5310520 tttaatataaaagtcaatattaatggtacatcgatgagggacttatttgagccctcatcctagaatccaccca 5310448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 565
Target Start/End: Complemental strand, 5526906 - 5526843
Alignment:
Q  501 atgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||||||| ||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||    
T  5526906 atgttttta-aaaataaattaaaagtgcttgaattattatatgatcatttatcatgttattattt 5526843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 660
Target Start/End: Original strand, 26318379 - 26318545
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgt 593  Q
    |||||| |||||||| |||||||||||||||||  ||||| ||||||||||||  |||||||||| ||| || || ||  |||||   |||| |||   |    
T  26318379 atataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgttgttaattcaattttctaaaagtcattttataaaat 26318478  T
Q  594 tcgcaatttaaaaacgaaaagtaaactctt-ccatcctttcccctcctaaactttccatccaaacaca 660  Q
     |  |||||||||| |||||||||| |||| || ||| || |||||||||||| ||||||||||||||    
T  26318479 ccataatttaaaaaagaaaagtaaa-tcttcccctccctttccctcctaaactctccatccaaacaca 26318545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 19090212 - 19090294
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacacttt 169  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||| |||||| || |||| ||||||||  || ||||||||    
T  19090212 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacacttt 19090294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 156
Target Start/End: Complemental strand, 6531478 - 6531409
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||||||||||||||| ||| |||| |||||| ||| |||||| ||||||||||||||||    
T  6531478 gaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgta 6531409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 35128720 - 35128814
Alignment:
Q  83 agaagaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||||||| || ||||||||||||||||||    |||||| |||| | |||||||| ||||||||||||||||  || |||||||| |||||| ||||    
T  35128720 agaagaatgctaacaacactctcttttgagc----tctctaacactcatttttttattgggtgaaatcaatgtaggacctacactttgaaaatggaacc 35128814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 644
Target Start/End: Complemental strand, 665996 - 665860
Alignment:
Q  509 ataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattat-tttaacttattaaaaaatatttcatagtgttcgcaatttaaaaa 607  Q
    |||||| |||||||||||| ||||| |||||||| ||| |||||||||||| ||| || || || |||||| | |||||||| | |||  ||||||||||    
T  665996 ataaaaaaaattaagtgtggttgaagtattatatcatcatttatcatgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaa 665897  T
Q  608 cgaaaagtaaactcttccatcctttcccctcctaaac 644  Q
     ||||| | ||| || || ||  ||||||||||||||    
T  665896 tgaaaaatgaaccctcccctcacttcccctcctaaac 665860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 618
Target Start/End: Complemental strand, 25468565 - 25468445
Alignment:
Q  498 aacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgc 597  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||| ||| ||||||| ||| |||  |||| ||  | |||| ||||| ||| ||| |      
T  25468565 aacatgtttttttaaaataaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccat 25468466  T
Q  598 aatttaaaaacgaaaagtaaa 618  Q
    |||||||||| ||||||||||    
T  25468465 aatttaaaaaagaaaagtaaa 25468445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 26318544 - 26318484
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| ||| |||||||||| ||||||||| || |||||||||||||||| |||||    
T  26318544 gtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaat 26318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 494 - 561
Target Start/End: Complemental strand, 14548776 - 14548709
Alignment:
Q  494 atataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||||| ||||| || ||||||||||||| ||||||||||  ||||||||||| ||||| ||||||||    
T  14548776 atataaaatgttattttaaaataaattaactgtgattgaaccattatatgatcatttataatgttatt 14548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 485
Target Start/End: Original strand, 9051541 - 9051599
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    ||||||||||||| ||||||||| ||| |||||||||| ||||||||| |||| |||||    
T  9051541 gtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaat 9051599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 373399 - 373468
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    ||||| || ||||| ||| ||||||||||| ||||||||||  |||||||||| |||| |||||||||||    
T  373399 gaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgta 373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 660
Target Start/End: Complemental strand, 4097388 - 4097239
Alignment:
Q  511 aaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacga 610  Q
    ||||||||||||||||  | ||| |||| ||||||| ||||||||||| ||| || || ||  |||||||||||| ||| ||| ||  ||| |||||  |    
T  4097388 aaaataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaata 4097289  T
Q  611 aaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||||||||||    | | ||||||||||||||  || |||||||||||    
T  4097288 aaagtaaactctcatcttccttcccctcctaaaccctcaatccaaacaca 4097239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 15323230 - 15323363
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||||||    | |||||| |||| ||||| || | | || ||| || | ||| |||||||||||||||    
T  15323230 gtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaattaagt 15323329  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||   |||  |||||||||||| ||| |||||||    
T  15323330 gtttctgatgtattatatgatcatttgtcatgtt 15323363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 15353369 - 15353501
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  |||||||||||    | |||||| |||| ||||| || | | || ||| |||||||| | ||||||| |||||    
T  15353369 gtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataaa-taagt 15353467  T
Q  525 gtgattgaattattatatgatcgtttatcatgtt 558  Q
    ||  ||||  |||||||||||| ||||| |||||    
T  15353468 gtttttgatgtattatatgatcatttataatgtt 15353501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 9719036 - 9719096
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||||||||||||||  |||||||| || |||||| ||||| ||| |||||    
T  9719036 gtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaat 9719096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 35128894 - 35128834
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||||||||||||| |||| ||||||||| | ||| |||||| |||| |||||||||||    
T  35128894 caacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgta 35128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 546
Target Start/End: Original strand, 16509356 - 16509406
Alignment:
Q  495 tataacatgtttttataaaataaattaagtgtgattgaattattatatgatc 546  Q
    ||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  16509356 tataaaatgttttta-aaaataaatcaagtgtgattgaagtattatatgatc 16509406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 17155446 - 17155497
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    |||||| |||||||||||||| || ||||||||||||  |||||||||||||    
T  17155446 taaaatcaattaagtgtgatttaagtattatatgatcagttatcatgttatt 17155497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 19737605 - 19737546
Alignment:
Q  97 aacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgta 156  Q
    |||||| | ||||||||||| ||||||||||| ||| ||| || ||||||||||||||||    
T  19737605 aacactttattttgagcactctctctagcactcactctttaattgggtgaaatcaatgta 19737546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 615
Target Start/End: Complemental strand, 7776046 - 7775996
Alignment:
Q  565 ttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagt 615  Q
    ||||||| ||||||||||||| |||||||||| ||||| |||| |||||||    
T  7776046 ttaactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagt 7775996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 19737432 - 19737526
Alignment:
Q  87 gaatgttatcaacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaatgaaacc 181  Q
    ||||| || |||||||||||||||| || | |||||| |||| ||| |||||| || | |||||||||||  || ||||||||  ||||||||||    
T  19737432 gaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacc 19737526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 32922437 - 32922486
Alignment:
Q  512 aaataaattaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    ||||| |||||||||||| ||| |||||||||||  ||||||||||||||    
T  32922437 aaatatattaagtgtgatcgaagtattatatgattatttatcatgttatt 32922486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 93; Significance: 6e-45; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 466 - 658
Target Start/End: Complemental strand, 16494 - 16302
Alignment:
Q  466 tttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    |||||||||| ||| ||| ||||   ||||||||||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| |    
T  16494 tttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgttaatatgt 16395  T
Q  566 taacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaaca 658  Q
    |||| | ||| |||| ||||||||||||||  |||||||||| ||||||||||| || || |||||| |||||||||||  ||||||||||||    
T  16394 taacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaaca 16302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 434 - 643
Target Start/End: Original strand, 15964 - 16173
Alignment:
Q  434 ttgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaa 533  Q
    |||||||||||||||| || | || ||||   |||||||||||||| ||||| |||  ||||||||||||||||| ||||| |||||| |||||||||||    
T  15964 ttgagggtttaggagggaacgagatgagagagtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaa 16063  T
Q  534 ttattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttc 633  Q
     |||| ||| || |||| |||| ||| ||| ||||||| |||||||| |||||||| | | || |||||||||| ||||| ||||||||| | ||| |||    
T  16064 gtattttataattgtttttcatattaatatgttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaataaactctttcctcccttc 16163  T
Q  634 ccctcctaaa 643  Q
    ||||||||||    
T  16164 ccctcctaaa 16173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 471 - 619
Target Start/End: Original strand, 18821 - 18968
Alignment:
Q  471 ttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaact 570  Q
    ||||||||| ||||| |||  ||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||    
T  18821 ttttcttttttaaatgacagactatataacatgtctttctaaaataaattatgtgtcattgaattattatatgatc-tttatcatgttaatatattaact 18919  T
Q  571 tattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
    | |||||||||| |||||||||| | | ||||||||| |||||||||||    
T  18920 tcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaac 18968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 619
Target Start/End: Original strand, 1177 - 1371
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatgtttttataaaataaattaagt 524  Q
    |||||||||||||||||||||||||  ||| |||| ||   |||||||||||||| ||||| ||   |||| ||||||||| || ||    |||||||||    
T  1177 gtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattcta----aaattaagt 1272  T
Q  525 gtgattgaattat----tatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaac 619  Q
     ||| |||| |||    |||||||||||||||||||  | ||| ||||||| |||||||| ||||||||||||||  |||||||||| |||||||||||    
T  1273 atgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaagtaaac 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 1238 - 1176
Alignment:
Q  598 aatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| |||||||||||||| || ||  ||||||||||||||  || |||||||||||    
T  1238 aatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacaca 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 1403 - 1461
Alignment:
Q  426 tgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaa 484  Q
    |||||||||||||||||||||| || || ||| |||| || ||||||||||||| ||||    
T  1403 tgtttggattgagggtttaggaagagaaaggatgagaggacttacttttcttttttaaa 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 15339 - 15458
Alignment:
Q  496 ataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttc 595  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||| || || | |||||||| | |||||||||| |    
T  15339 ataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaaaaaaca-ttcatagtgtcc 15437  T
Q  596 gcaatttaaaaacgaaaagta 616  Q
    | ||||||||||  |||||||    
T  15438 gtaatttaaaaataaaaagta 15458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 576 - 660
Target Start/End: Complemental strand, 3235 - 3151
Alignment:
Q  576 aaaaatatttcatagtgttcgcaatttaaaaacgaaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    ||||| ||||||||||||  | |||||||||| |||||||||||||| || ||| ||||||||||||||| || |||||||||||    
T  3235 aaaaacatttcatagtgtctgtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacaca 3151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Original strand, 3152 - 3212
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||||||| ||||||||||  |||||||| ||   |||||||||||||| |||||    
T  3152 gtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaat 3212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 660
Target Start/End: Original strand, 242306 - 242456
Alignment:
Q  510 taaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattttaacttattaaaaaatatttcatagtgttcgcaatttaaaaacg 609  Q
    |||||||||| |||| |  |||||||||||||| ||| ||||||||||  ||| || || || |||||||  |||| ||| ||| || |||||||||| |    
T  242306 taaaataaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaag 242405  T
Q  610 aaaagtaaactcttccatcctttcccctcctaaactttccatccaaacaca 660  Q
    |||||||||| || || ||| |||||||  |||||  ||||||||||||||    
T  242406 aaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 81570 - 81510
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| ||||||||| |||| |||||||| |||||||||||| ||||||||||||||||||    
T  81570 ttttaaaaaataaatcaagtatgattgaagtattatatgatcatttatcatgttattattt 81510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 6069 - 6009
Alignment:
Q  505 ttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||| ||||||||| |||| ||||| || |||||||||||| ||||||||||||||||||    
T  6069 ttttaaaaaataaatcaagtatgattcaagtattatatgatcatttatcatgttattattt 6009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 565
Target Start/End: Complemental strand, 69378 - 69306
Alignment:
Q  493 tatataacatgtttttataaaataaattaagtgtgattgaattattatatgatcgtttatcatgttattattt 565  Q
    ||||||| |||||||| |||||||||||||| ||||  ||| |||||||||||| |||||||| || ||||||    
T  69378 tatataaaatgtttttttaaaataaattaagggtgacagaagtattatatgatcatttatcatcttgttattt 69306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 30919 - 30997
Alignment:
Q  96 caacactctcttttgagcactttctctagcacttacttttttatagggtgaaatcaatgtaacacttacactttaaaaa 174  Q
    ||||||||||||||||| ||| | ||||||| | |||||||||| |||||| |||||||||  || |||||||| ||||    
T  30919 caacactctcttttgagtactctttctagcattcacttttttattgggtgacatcaatgtagaacctacactttgaaaa 30997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 561
Target Start/End: Complemental strand, 100693 - 100651
Alignment:
Q  519 ttaagtgtgattgaattattatatgatcgtttatcatgttatt 561  Q
    ||||||||||||||||| |||||||||  ||||||||||||||    
T  100693 ttaagtgtgattgaattgttatatgattatttatcatgttatt 100651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 109681 - 109644
Alignment:
Q  43 ttaatttt-ttaattttaaccatttgatctatttatca 79  Q
    |||||||| |||||||||||||||||||||||||||||    
T  109681 ttaattttgttaattttaaccatttgatctatttatca 109644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 427 - 546
Target Start/End: Original strand, 30722 - 30842
Alignment:
Q  427 gtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaatcacaatctatataacatg-tttttataaaataaattaagtg 525  Q
    ||||||||||||| |||||||||| |||||||| || |  | |||||| |||| ||||| || | | || ||| ||| ||||| | ||||||||||||||    
T  30722 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaattaagtg 30821  T
Q  526 tgattgaattattatatgatc 546  Q
    |  ||||| | ||||||||||    
T  30822 tttttgaagtgttatatgatc 30842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 184846 - 184786
Alignment:
Q  425 gtgtttggattgagggtttaggaggaaaagggaggagatgatttacttttcttttctaaat 485  Q
    |||||||||| |||||||||||||| ||||||| | || | |||||| ||||||| |||||    
T  184846 gtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaat 184786  T

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