View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20963_low_11 (Length: 479)
Name: NF20963_low_11
Description: NF20963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20963_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 32 - 463
Target Start/End: Complemental strand, 37702759 - 37702332
Alignment:
| Q |
32 |
gatctttataacctttgagatcaatcccttgaacgtgtggagagacatagagaatcttggggtcttagagaccaatgataatggggtgcaaagtgtatct |
131 |
Q |
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| T |
37702759 |
gatctttataacctttgagattaatcccttgaacgtgtggagagacatagagaatcttggggtcttagagaccaatgataatggggtgcaaagtgtatct |
37702660 |
T |
|
| Q |
132 |
atcttccttttgaatttgttgttgttgaataaaaataagacatgcatttccacacgaggcaagaatcacactatatatacagcaataatcttttatcatt |
231 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37702659 |
atcttccttttgaatttgttgttgttgaataaaaataagacatgcatttccacacgaggcaagaatcacactata----cagcaataatcttttatcatt |
37702564 |
T |
|
| Q |
232 |
ttatgctctcttgcacgcacaaattattaatgccatcaatagagtccacaatcacgtgtaatgtgtccaccaataaacgtacaagtcattttcaaaccag |
331 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37702563 |
ttatgctctcttgcacgcacaaattattaatgccatcaatagagtccacaatcacgtgtaatgtgtccaccaataaacgtacaagtcattttcaacccag |
37702464 |
T |
|
| Q |
332 |
cttgccaaaatcatatatgttcacaaacttcattttttaacacaagaagatcttcaacttcataatgggggtgggttctacatgatctagtgcacaaata |
431 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37702463 |
cttgccaaaatcatatatgttcacaaacttcatttttgaacacaagaagatcttcaacttcataatgggggtgggttctacatgatctagtgcacaaata |
37702364 |
T |
|
| Q |
432 |
tctgtatttaaaactctaacaaatgctctttt |
463 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
37702363 |
tctgtatttaaaactctaacaaatgctctttt |
37702332 |
T |
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