View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20963_low_23 (Length: 395)

Name: NF20963_low_23
Description: NF20963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20963_low_23
NF20963_low_23
[»] chr5 (30 HSPs)
chr5 (15-287)||(11178948-11179217)
chr5 (284-395)||(2740270-2740381)
chr5 (288-395)||(33149631-33149738)
chr5 (288-393)||(14831814-14831919)
chr5 (291-393)||(18520879-18520981)
chr5 (287-395)||(36732935-36733043)
chr5 (288-395)||(35785199-35785306)
chr5 (288-395)||(40145407-40145514)
chr5 (278-395)||(6679688-6679805)
chr5 (288-395)||(28177775-28177882)
chr5 (288-395)||(42414295-42414402)
chr5 (287-391)||(13811651-13811755)
chr5 (288-395)||(26720516-26720623)
chr5 (288-395)||(26990265-26990372)
chr5 (288-392)||(35943888-35943992)
chr5 (287-395)||(15409603-15409711)
chr5 (287-388)||(31008987-31009088)
chr5 (288-388)||(20073516-20073616)
chr5 (289-393)||(36875607-36875702)
chr5 (286-392)||(2252164-2252270)
chr5 (285-379)||(41470425-41470519)
chr5 (289-392)||(16327902-16328005)
chr5 (287-392)||(3921261-3921366)
chr5 (288-393)||(33825319-33825424)
chr5 (336-395)||(31132392-31132451)
chr5 (287-392)||(9603812-9603917)
chr5 (332-392)||(21370048-21370108)
chr5 (334-389)||(38296249-38296304)
chr5 (315-393)||(39557512-39557590)
chr5 (319-392)||(6259997-6260070)
[»] chr1 (33 HSPs)
chr1 (284-388)||(51898683-51898787)
chr1 (288-395)||(47452313-47452420)
chr1 (287-395)||(2581914-2582022)
chr1 (287-395)||(38595153-38595261)
chr1 (291-395)||(44548369-44548473)
chr1 (288-395)||(9474869-9474976)
chr1 (288-395)||(27564728-27564835)
chr1 (285-395)||(50630455-50630565)
chr1 (287-395)||(8346381-8346489)
chr1 (288-395)||(3000319-3000426)
chr1 (288-395)||(37649198-37649305)
chr1 (286-395)||(41758803-41758912)
chr1 (287-395)||(32813246-32813354)
chr1 (283-395)||(48716275-48716387)
chr1 (286-395)||(37926431-37926540)
chr1 (287-395)||(38632314-38632422)
chr1 (319-395)||(43163-43239)
chr1 (319-395)||(13414792-13414868)
chr1 (295-395)||(26440741-26440841)
chr1 (287-395)||(23597084-23597192)
chr1 (288-388)||(6260870-6260970)
chr1 (291-395)||(26274435-26274539)
chr1 (287-395)||(45044553-45044661)
chr1 (287-395)||(49811520-49811628)
chr1 (289-388)||(11152378-11152476)
chr1 (288-392)||(47748443-47748546)
chr1 (331-395)||(48489343-48489407)
chr1 (288-392)||(50590996-50591100)
chr1 (293-392)||(44453984-44454083)
chr1 (319-392)||(5958996-5959069)
chr1 (283-392)||(41608489-41608598)
chr1 (315-383)||(44334175-44334243)
chr1 (331-388)||(3302533-3302590)
[»] chr2 (35 HSPs)
chr2 (288-395)||(17473020-17473127)
chr2 (286-395)||(5574481-5574590)
chr2 (284-393)||(7465730-7465839)
chr2 (287-395)||(9058479-9058587)
chr2 (287-395)||(30915462-30915570)
chr2 (286-393)||(28863453-28863560)
chr2 (287-392)||(33436096-33436201)
chr2 (287-395)||(10249375-10249483)
chr2 (288-395)||(13438343-13438450)
chr2 (286-395)||(32505641-32505750)
chr2 (287-395)||(42257192-42257300)
chr2 (288-395)||(40613895-40614002)
chr2 (288-395)||(40701478-40701585)
chr2 (287-392)||(20700814-20700919)
chr2 (291-395)||(19930813-19930917)
chr2 (287-395)||(38273135-38273243)
chr2 (288-395)||(28381648-28381755)
chr2 (288-392)||(27864704-27864808)
chr2 (288-395)||(4060685-4060792)
chr2 (286-392)||(33436209-33436315)
chr2 (287-395)||(38882804-38882914)
chr2 (284-392)||(41575133-41575242)
chr2 (284-393)||(2533120-2533228)
chr2 (286-395)||(36168834-36168943)
chr2 (288-392)||(17820000-17820104)
chr2 (287-392)||(26891500-26891605)
chr2 (310-392)||(2997483-2997565)
chr2 (319-392)||(38732385-38732458)
chr2 (287-392)||(45097731-45097836)
chr2 (310-392)||(13365375-13365457)
chr2 (331-388)||(3737986-3738043)
chr2 (319-392)||(43490152-43490225)
chr2 (342-392)||(3154197-3154247)
chr2 (310-392)||(3440001-3440083)
chr2 (296-358)||(41758593-41758655)
[»] chr8 (30 HSPs)
chr8 (286-388)||(37038477-37038579)
chr8 (288-395)||(34012289-34012396)
chr8 (288-395)||(1179933-1180040)
chr8 (283-395)||(40423936-40424048)
chr8 (289-392)||(5957831-5957934)
chr8 (288-395)||(12831047-12831154)
chr8 (288-395)||(15197333-15197440)
chr8 (293-395)||(10621080-10621182)
chr8 (287-395)||(14547921-14548029)
chr8 (288-395)||(504114-504221)
chr8 (288-395)||(43414574-43414681)
chr8 (286-395)||(44507080-44507189)
chr8 (288-395)||(23122590-23122697)
chr8 (288-393)||(15048177-15048281)
chr8 (321-392)||(8841428-8841499)
chr8 (319-392)||(10284627-10284700)
chr8 (287-395)||(4854856-4854964)
chr8 (332-395)||(9122229-9122292)
chr8 (279-392)||(15258925-15259039)
chr8 (288-356)||(20074966-20075034)
chr8 (287-392)||(16383376-16383481)
chr8 (287-392)||(34307215-34307320)
chr8 (287-392)||(42221514-42221619)
chr8 (288-392)||(30479470-30479574)
chr8 (330-392)||(38229470-38229532)
chr8 (319-392)||(16056397-16056470)
chr8 (287-392)||(24307789-24307894)
chr8 (285-392)||(17443822-17443929)
chr8 (286-392)||(32032723-32032828)
chr8 (340-392)||(42354584-42354636)
[»] chr7 (37 HSPs)
chr7 (286-395)||(3434560-3434669)
chr7 (287-395)||(8080376-8080484)
chr7 (286-395)||(36362024-36362133)
chr7 (287-395)||(7389388-7389496)
chr7 (287-395)||(19436180-19436288)
chr7 (288-395)||(19329842-19329949)
chr7 (286-395)||(36361906-36362015)
chr7 (291-395)||(3783998-3784102)
chr7 (283-395)||(38267035-38267147)
chr7 (288-393)||(4999509-4999614)
chr7 (287-395)||(38837216-38837324)
chr7 (287-395)||(40957706-40957814)
chr7 (288-395)||(35137533-35137640)
chr7 (319-395)||(3694398-3694474)
chr7 (289-395)||(32951486-32951592)
chr7 (286-395)||(46033794-46033903)
chr7 (293-395)||(35522881-35522983)
chr7 (319-392)||(8238244-8238317)
chr7 (288-392)||(41423682-41423786)
chr7 (288-391)||(21234401-21234504)
chr7 (288-382)||(46374808-46374902)
chr7 (287-392)||(35468851-35468956)
chr7 (287-392)||(36208172-36208277)
chr7 (319-392)||(16374820-16374893)
chr7 (286-395)||(26296642-26296751)
chr7 (287-392)||(38044196-38044301)
chr7 (287-392)||(11044187-11044282)
chr7 (286-392)||(22343359-22343465)
chr7 (286-392)||(41915739-41915845)
chr7 (287-388)||(7727905-7728006)
chr7 (287-392)||(18207179-18207283)
chr7 (288-395)||(31735884-31735984)
chr7 (322-390)||(27744307-27744375)
chr7 (288-392)||(40846109-40846213)
chr7 (278-392)||(32564422-32564536)
chr7 (288-392)||(39255920-39256023)
chr7 (287-354)||(10343597-10343664)
[»] chr4 (35 HSPs)
chr4 (283-395)||(11511455-11511567)
chr4 (287-392)||(50052424-50052529)
chr4 (288-395)||(6034044-6034151)
chr4 (287-395)||(48183042-48183150)
chr4 (285-395)||(29234238-29234348)
chr4 (287-395)||(480440-480548)
chr4 (287-395)||(24995100-24995208)
chr4 (288-388)||(50526171-50526271)
chr4 (288-395)||(41236347-41236454)
chr4 (288-392)||(3481654-3481758)
chr4 (287-395)||(42044360-42044468)
chr4 (288-395)||(40574779-40574886)
chr4 (288-395)||(54473526-54473633)
chr4 (287-392)||(29239885-29239990)
chr4 (288-395)||(31910192-31910299)
chr4 (287-393)||(23608234-23608340)
chr4 (326-395)||(41823920-41823989)
chr4 (287-392)||(29977884-29977989)
chr4 (310-392)||(50813888-50813970)
chr4 (319-392)||(48647722-48647795)
chr4 (287-392)||(55475190-55475295)
chr4 (327-395)||(53352559-53352627)
chr4 (310-392)||(17983739-17983821)
chr4 (282-392)||(29547955-29548065)
chr4 (283-392)||(8343159-8343268)
chr4 (287-392)||(19670712-19670817)
chr4 (286-392)||(47986206-47986312)
chr4 (310-392)||(32766980-32767062)
chr4 (332-389)||(28480267-28480324)
chr4 (332-389)||(28481142-28481199)
chr4 (332-389)||(28482017-28482074)
chr4 (319-392)||(29589736-29589809)
chr4 (287-356)||(47104543-47104612)
chr4 (284-392)||(44536742-44536849)
chr4 (328-392)||(56300161-56300225)
[»] chr3 (34 HSPs)
chr3 (287-391)||(27714888-27714992)
chr3 (287-395)||(49607413-49607521)
chr3 (292-395)||(48587084-48587187)
chr3 (288-395)||(53982011-53982118)
chr3 (288-395)||(33644200-33644307)
chr3 (286-395)||(17470403-17470512)
chr3 (293-395)||(52629305-52629407)
chr3 (287-395)||(54868888-54868996)
chr3 (289-395)||(31456690-31456796)
chr3 (288-392)||(8076393-8076497)
chr3 (288-395)||(26141525-26141632)
chr3 (286-395)||(9562997-9563106)
chr3 (287-395)||(11095348-11095454)
chr3 (283-392)||(24699950-24700059)
chr3 (287-395)||(36707421-36707525)
chr3 (277-395)||(20764908-20765025)
chr3 (287-392)||(33118847-33118952)
chr3 (288-392)||(14623835-14623939)
chr3 (287-395)||(41189757-41189865)
chr3 (288-395)||(51419353-51419460)
chr3 (289-392)||(13898051-13898154)
chr3 (286-392)||(35536624-35536730)
chr3 (287-395)||(11347915-11348023)
chr3 (288-395)||(47531865-47531972)
chr3 (286-392)||(8956760-8956866)
chr3 (278-392)||(30801729-30801843)
chr3 (287-392)||(35965778-35965875)
chr3 (293-392)||(26754700-26754799)
chr3 (288-392)||(41080709-41080811)
chr3 (310-392)||(36331325-36331407)
chr3 (315-392)||(42823138-42823215)
chr3 (287-395)||(11907370-11907478)
chr3 (288-392)||(45058549-45058652)
chr3 (297-369)||(43745755-43745827)
[»] scaffold0237 (1 HSPs)
scaffold0237 (276-395)||(4017-4136)
[»] chr6 (21 HSPs)
chr6 (276-395)||(29857815-29857934)
chr6 (288-395)||(32869678-32869785)
chr6 (286-395)||(11427614-11427725)
chr6 (291-395)||(22880651-22880755)
chr6 (291-395)||(23128120-23128224)
chr6 (288-395)||(17598554-17598661)
chr6 (286-395)||(31976246-31976355)
chr6 (287-395)||(6209458-6209566)
chr6 (283-395)||(31109393-31109505)
chr6 (289-395)||(946377-946483)
chr6 (287-395)||(31110754-31110860)
chr6 (287-393)||(15832576-15832682)
chr6 (288-392)||(31953026-31953130)
chr6 (292-393)||(28536483-28536582)
chr6 (283-392)||(4231543-4231652)
chr6 (287-392)||(15990038-15990143)
chr6 (287-392)||(30341356-30341461)
chr6 (288-392)||(15508020-15508124)
chr6 (293-392)||(9379708-9379807)
chr6 (287-392)||(12732481-12732586)
chr6 (288-392)||(30870020-30870118)
[»] scaffold1268 (1 HSPs)
scaffold1268 (288-392)||(925-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (288-392)||(925-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (287-395)||(10102-10210)
[»] scaffold0018 (1 HSPs)
scaffold0018 (319-392)||(152529-152602)
[»] scaffold0316 (1 HSPs)
scaffold0316 (331-392)||(17097-17158)
[»] scaffold0110 (1 HSPs)
scaffold0110 (319-392)||(8859-8932)


Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 15 - 287
Target Start/End: Original strand, 11178948 - 11179217
Alignment:
Q  15 tcacatggaaatgctactagagcacgagaacaaggagaagaaagaaaagaaccaatgaatgaaagttggcgagatgatatttgaaacgacaaatgtatgg 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11178948 tcacatggaaatgctactagtgcacgagaacaaggagaagaaagaaaagaaccaatgaatgaaagttggcgagatgatatttgaaacgacaaatgtatgg 11179047  T
Q  115 gtaaagagagaaactggattgaggatgttgtatttatatggaaaaaggaggaggttggggcgtaaagtgtgagggaaaatgtttgtggggcctattttga 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11179048 gtaaagagagaaactggattgaggatgttgtatttatatggaaaaaggaggaggttggggcgtaaagtgtgagggaaaatgtttgtggggcctattttga 11179147  T
Q  215 ggtatatcatggggtgagaatggatgagtttttatgtgatttggatcatcacaattacaactcatttatttta 287  Q
    |||||   ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11179148 ggtat---atgtggtgagaatggatgagttttgatgtgatttggatcatcacaattacaactcatttatttta 11179217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 284 - 395
Target Start/End: Original strand, 2740270 - 2740381
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    ||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2740270 tttagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 2740369  T
Q  384 tttctcttttct 395  Q
    ||||||||||||    
T  2740370 tttctcttttct 2740381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 33149738 - 33149631
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  388 tcttttct 395  Q
    ||||||||    
T  33149638 tcttttct 33149631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 14831814 - 14831919
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |   |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  388 tctttt 393  Q
    | ||||    
T  14831914 tttttt 14831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 393
Target Start/End: Complemental strand, 18520981 - 18520879
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  391 ttt 393  Q
    |||    
T  18520881 ttt 18520879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 36733043 - 36732935
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| | | |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  36733043 agagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacacttt 36732944  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  36732943 ctcttttct 36732935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 35785199 - 35785306
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  388 tcttttct 395  Q
    ||||||||    
T  35785299 tcttttct 35785306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 40145407 - 40145514
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  388 tcttttct 395  Q
    ||||||||    
T  40145507 tcttttct 40145514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 278 - 395
Target Start/End: Original strand, 6679688 - 6679805
Alignment:
Q  278 atttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaa 377  Q
    |||| ||||||||| |||||||||||| |||||||| ||| |||||||| ||||||||||||| ||||||||||||||| ||||| |||| |||||||||    
T  6679688 attttttttagagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaa 6679787  T
Q  378 gcacactttctcttttct 395  Q
     |||| ||||||||||||    
T  6679788 acacattttctcttttct 6679805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 28177775 - 28177882
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  388 tcttttct 395  Q
    ||||||||    
T  28177875 tcttttct 28177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 42414402 - 42414295
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | |  ||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  388 tcttttct 395  Q
    ||||||||    
T  42414302 tcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 13811651 - 13811755
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||||| |||||||||| | | |||| ||| |||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  13811651 agagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13811750  T
Q  387 ctctt 391  Q
    |||||    
T  13811751 ctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 26720516 - 26720623
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  388 tcttttct 395  Q
    ||||||||    
T  26720616 tcttttct 26720623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 26990265 - 26990372
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||| ||||| ||| ||||||||||||||| | ||| ||||||||||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  388 tcttttct 395  Q
    ||||||||    
T  26990365 tcttttct 26990372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 35943992 - 35943888
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| | | |||| ||| |||||| | ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  388 tcttt 392  Q
    |||||    
T  35943892 tcttt 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 15409711 - 15409603
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| ||| |||| ||  ||||||  |||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||| |    
T  15409711 agagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactct 15409612  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  15409611 ctcttttct 15409603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 31008987 - 31009088
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | ||| |||| ||  ||||||  |||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31008987 agagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 31009086  T
Q  387 ct 388  Q
    ||    
T  31009087 ct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||||||||| |||||||||||||  |||||   |||||||| || ||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  388 t 388  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 36875702 - 36875607
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||||||||| | | |||| ||| |||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat---------agtcacgtggatcccgcacaagcacactttct 36875612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 2252270 - 2252164
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||| | ||| |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| ||||||    
T  2252270 tagagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 2252171  T
Q  386 tctcttt 392  Q
    |||||||    
T  2252170 tctcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 41470519 - 41470425
Alignment:
Q  285 ttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagc 379  Q
    |||||||||| ||||||||| | |||||| ||| |||||| ||||| | |  || |||||||||||||||||||||||||||| |||||||||||    
T  41470519 ttagagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 16327902 - 16328005
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||| ||| ||||| |||| ||| |||||| || ||||||||||||||||||||||||||||  ||| ||| | | | |||||||||||||| |    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttttt 16328001  T
Q  389 cttt 392  Q
    ||||    
T  16328002 cttt 16328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 3921366 - 3921261
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  3921366 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 3921267  T
Q  387 ctcttt 392  Q
    ||||||    
T  3921266 ctcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 33825424 - 33825319
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||||||||| |||||| ||  |||| ||| ||||||| | ||||||||||||||||||||||||||||  ||| ||| | |   |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  388 tctttt 393  Q
    ||||||    
T  33825324 tctttt 33825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 336 - 395
Target Start/End: Original strand, 31132392 - 31132451
Alignment:
Q  336 ccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttct 31132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 9603812 - 9603917
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||| | ||| |||| || |||||||| | || ||||| ||| ||||||||||||| | ||||  |||| |||  |||| ||||||||    
T  9603812 agagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacacttt 9603911  T
Q  387 ctcttt 392  Q
    ||||||    
T  9603912 ctcttt 9603917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 21370048 - 21370108
Alignment:
Q  332 acacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||  |||||||||||| || |||||||||| ||||||||| |||| |||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 38296249 - 38296304
Alignment:
Q  334 acccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctc 389  Q
    ||||||| ||||||| |||||||||  ||||||||||  |||||||||||||||||    
T  38296249 acccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 393
Target Start/End: Complemental strand, 39557590 - 39557512
Alignment:
Q  315 tggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctttt 393  Q
    ||||||||||||  || ||| ||||| |||||||||||||||  |||| |||| |||  |||| |||||||||||||||    
T  39557590 tggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctctttt 39557512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 6260070 - 6259997
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| ||||||||  |||||||| |||| | ||||| |||| | | || |||||||||||||||||    
T  6260070 aatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttctcttt 6259997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 9e-43; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 51898787 - 51898683
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51898787 tttagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 51898688  T
Q  384 tttct 388  Q
    |||||    
T  51898687 tttct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 47452420 - 47452313
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  388 tcttttct 395  Q
    ||||||||    
T  47452320 tcttttct 47452313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 2581914 - 2582022
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  2581914 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 2582013  T
Q  387 ctcttttct 395  Q
    || ||||||    
T  2582014 cttttttct 2582022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 38595153 - 38595261
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||| | | |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  38595153 agagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 38595252  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  38595253 ctcttttct 38595261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 44548473 - 44548369
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| |||||||| ||| |||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  391 tttct 395  Q
    |||||    
T  44548373 tttct 44548369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 9474976 - 9474869
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  388 tcttttct 395  Q
    ||||||||    
T  9474876 tcttttct 9474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 27564835 - 27564728
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| ||| |||| ||| |||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  388 tcttttct 395  Q
    ||||||||    
T  27564735 tcttttct 27564728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 50630455 - 50630565
Alignment:
Q  285 ttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 384  Q
    |||||||||||||||||||||| | |||| ||| |||||| ||||||  ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  50630455 ttagagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 50630554  T
Q  385 ttctcttttct 395  Q
    |||||||||||    
T  50630555 ttctcttttct 50630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 8346489 - 8346381
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||  | |||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  8346489 agagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacacttt 8346390  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  8346389 ctcttttct 8346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 3000319 - 3000426
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||| | | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  388 tcttttct 395  Q
    ||||||||    
T  3000419 tcttttct 3000426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 37649198 - 37649305
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |||||||| ||| ||||||| |||||||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  388 tcttttct 395  Q
     |||||||    
T  37649298 ccttttct 37649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 41758803 - 41758912
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | | ||| |||| |||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||| |||||||    
T  41758803 tagagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactt 41758902  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  41758903 tctcttttct 41758912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 32813246 - 32813354
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| ||| |||| ||| |||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  32813246 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacacttt 32813345  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  32813346 ctcttttct 32813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 48716387 - 48716275
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| ||||||||||||||||| | | |||| ||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  48716387 tttttgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T
Q  383 ctttctcttttct 395  Q
    |||| ||||||||    
T  48716287 ctttatcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 37926540 - 37926431
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| ||||||||||||||||||||| ||| |||||| | ||| ||||||||||||||||||||||||| | ||| ||||||||| ||||| ||||||    
T  37926540 tagagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactt 37926441  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  37926440 tctcttttct 37926431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 38632422 - 38632314
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||| ||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  38632422 agagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38632323  T
Q  387 ctcttttct 395  Q
     ||||||||    
T  38632322 ttcttttct 38632314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 319 - 395
Target Start/End: Original strand, 43163 - 43239
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  43163 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttct 43239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 319 - 395
Target Start/End: Original strand, 13414792 - 13414868
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 395
Target Start/End: Original strand, 26440741 - 26440841
Alignment:
Q  295 gatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttc 394  Q
    |||| ||||| ||| |||||||  |||||||||||| ||||||||| ||||||||||||||| | ||| ||||||||||| |||||||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttttc 26440840  T
Q  395 t 395  Q
    |    
T  26440841 t 26440841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 23597192 - 23597084
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||| ||| ||||||| |||||| ||||||||||||||||||||||| | ||||| || |  |||||| ||||||||    
T  23597192 agagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttt 23597093  T
Q  387 ctcttttct 395  Q
     ||||||||    
T  23597092 atcttttct 23597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 388
Target Start/End: Original strand, 6260870 - 6260970
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||| ||||||||| |||| ||||||||||||| |  |||||||||||||||||| ||| || |||||||||| |||||| ||||||| ||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  388 t 388  Q
    |    
T  6260970 t 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 26274435 - 26274539
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| | | |||  ||| |||||| | ||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| ||||||| |||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttct 26274534  T
Q  391 tttct 395  Q
    |||||    
T  26274535 tttct 26274539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 45044661 - 45044553
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| || || |||| ||| |||||||| ||||||||||| | |||||||||||| |||| ||| |||| ||||||||| |||| |||    
T  45044661 agagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacatttt 45044562  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  45044561 ctcttttct 45044553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 49811628 - 49811520
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||| ||||| ||| |||| ||  |||||||| ||||||| ||||| ||||||||||||||||| ||  | ||  |||||||||||||||||    
T  49811628 agagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacacttt 49811529  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  49811528 ctcttttct 49811520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 388
Target Start/End: Complemental strand, 11152476 - 11152378
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||| ||||||| | ||| || ||| ||||||||||| |||| ||||| |||||||||||||||||||| || || ||||||||||||| ||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 47748443 - 47748546
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| ||| | |||| ||| ||||||||||| |||||||| |||||||||||||| || | ||  ||||||||||||||| | ||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  388 tcttt 392  Q
    |||||    
T  47748542 tcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 48489343 - 48489407
Alignment:
Q  331 gacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    |||| ||||| |||||||||||| || ||||||||||||||||||||||||| ||||| ||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttct 48489407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 50591100 - 50590996
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  388 tcttt 392  Q
    |||||    
T  50591000 tcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 44453984 - 44454083
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| | |||||  ||| |||||| |  |||| ||||||| |||||||||||| || || ||||||||||| |||||||||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 5959069 - 5958996
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||  |||||||||||| |||||||||||| || ||||  |||| |||||||||| |||||||||||||    
T  5959069 aatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 41608598 - 41608489
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| |||| |||||||||| | ||| |||| ||| ||||||||| ||||||| |||| |||||||||||| || | ||  |||| |||| ||||| |||    
T  41608598 tttttgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtaca 41608499  T
Q  383 ctttctcttt 392  Q
    ||||||||||    
T  41608498 ctttctcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 44334243 - 44334175
Alignment:
Q  315 tggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    ||||||||||| | |||||| ||||| ||||| ||||||||||||||| |||| || |||||| |||||    
T  44334243 tggtaatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 3302590 - 3302533
Alignment:
Q  331 gacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||| |||||||||||||||| |||  |||| |||  |||||||||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 17473020 - 17473127
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  388 tcttttct 395  Q
    ||||||||    
T  17473120 tcttttct 17473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 5574590 - 5574481
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| |   |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5574590 tagagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 5574491  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  5574490 tctcttttct 5574481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 7465839 - 7465730
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    ||||||||||||||||||||| | | |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  7465839 tttagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacac 7465740  T
Q  384 tttctctttt 393  Q
    ||||||||||    
T  7465739 tttctctttt 7465730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 9058479 - 9058587
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  9058479 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 9058578  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  9058579 ctcttttct 9058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 30915462 - 30915570
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  30915462 agagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 30915561  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  30915562 ctcttttct 30915570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 286 - 393
Target Start/End: Original strand, 28863453 - 28863560
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||| |||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28863453 tagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 28863552  T
Q  386 tctctttt 393  Q
    ||||||||    
T  28863553 tctctttt 28863560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 33436201 - 33436096
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  33436201 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 33436102  T
Q  387 ctcttt 392  Q
    ||||||    
T  33436101 ctcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 10249483 - 10249375
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  10249483 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 10249384  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  10249383 ctcttttct 10249375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 13438343 - 13438450
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||  |||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  388 tcttttct 395  Q
    ||||||||    
T  13438443 tcttttct 13438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 32505750 - 32505641
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | | |||| ||  |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  32505750 tagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 32505651  T
Q  386 tctcttttct 395  Q
    ||| ||||||    
T  32505650 tctattttct 32505641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 42257192 - 42257300
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||    
T  42257192 agagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacacttt 42257291  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  42257292 ctcttttct 42257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 40614002 - 40613895
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  388 tcttttct 395  Q
    ||||||||    
T  40613902 tcttttct 40613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 40701478 - 40701585
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  388 tcttttct 395  Q
    ||||||||    
T  40701578 tcttttct 40701585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 20700814 - 20700919
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||  ||| ||||||||||||||| || ||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  20700814 agagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 20700913  T
Q  387 ctcttt 392  Q
    ||||||    
T  20700914 ctcttt 20700919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 19930917 - 19930813
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| | | |||| ||| |||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  391 tttct 395  Q
    |||||    
T  19930817 tttct 19930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 38273243 - 38273135
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| ||  |||||||| |||||||||||| ||||||||| ||||||||||||||||| ||| |||| ||||||| ||||||||||    
T  38273243 agagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacacttt 38273144  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  38273143 ctcttttct 38273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 28381755 - 28381648
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||| || |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  388 tcttttct 395  Q
    ||||||||    
T  28381655 tcttttct 28381648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 27864704 - 27864808
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||  ||| |||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  388 tcttt 392  Q
    |||||    
T  27864804 tcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 4060685 - 4060792
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||  |||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  388 tcttttct 395  Q
    | ||||||    
T  4060785 ttttttct 4060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 33436209 - 33436315
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||   || |||||    ||||||||||||||    
T  33436209 tagagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactt 33436308  T
Q  386 tctcttt 392  Q
    |||||||    
T  33436309 tctcttt 33436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 38882914 - 38882804
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtgga---tcccgcacaagcacac 383  Q
    |||||||||||||||||| | | |||| ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||    ||||||||||| |||    
T  38882914 agagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcac 38882816  T
Q  384 tttctcttttct 395  Q
    ||||||||||||    
T  38882815 tttctcttttct 38882804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 392
Target Start/End: Original strand, 41575133 - 41575242
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatccc-gcacaagcaca 382  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||||||  |||| |||||| ||||| || |||| ||||| |||  ||||||||||    
T  41575133 tttaaagtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcaca 41575232  T
Q  383 ctttctcttt 392  Q
    ||||||||||    
T  41575233 ctttctcttt 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 2533120 - 2533228
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    |||||||| |||||||||||| ||| |||  ||| |||||| ||||||||||| ||| ||||||||||||||||| ||| | || |||||||||||||||    
T  2533120 tttagagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacac 2533218  T
Q  384 tttctctttt 393  Q
    ||| ||||||    
T  2533219 tttttctttt 2533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 36168834 - 36168943
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||||| ||| |||||||  |||||| ||||| || |||||| |||||| |||||||| | ||| |||| |||||||||||| ||||    
T  36168834 tagagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactt 36168933  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  36168934 tctcttttct 36168943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 17820104 - 17820000
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| | || ||| ||| ||||||||| |||||||||||| |||||||||||| || || ||||||| ||| ||||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  388 tcttt 392  Q
    |||||    
T  17820004 tcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 26891605 - 26891500
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||  | | |||| ||| ||||||||| | |||||||||| |||||||||||| || |||||||||| | || ||||||||| |||    
T  26891605 agagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatttt 26891506  T
Q  387 ctcttt 392  Q
    ||||||    
T  26891505 ctcttt 26891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 2997565 - 2997483
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 38732385 - 38732458
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||| || |||||||||||| |||||||||||| || ||||  |||| |||||||||| |||||||||||||    
T  38732385 aatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 45097836 - 45097731
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | ||| |||| ||| |||||| || |||||||||| | |||||||||||| || | ||  |||| |||||||||| |||||||    
T  45097836 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 45097737  T
Q  387 ctcttt 392  Q
    ||||||    
T  45097736 ctcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 13365375 - 13365457
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||| |||| |||| |||||||||||| |||||||||||| ||   ||  |||| |||||||||| |||||||||||||    
T  13365375 ttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 3737986 - 3738043
Alignment:
Q  331 gacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||| |||||||||||| || |||| ||||| |||||||||||||| |||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 43490152 - 43490225
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| ||||||| |||||    
T  43490152 aatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 3154197 - 3154247
Alignment:
Q  342 aaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||||||||| ||||| |||||||||| ||| |||| |||||||||    
T  3154197 aaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctcttt 3154247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 3440001 - 3440083
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||| ||||||| | | |||||||||| |||||||| ||| ||  | ||||||| |||||||||||||| |||||||||    
T  3440001 ttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctcttt 3440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 41758593 - 41758655
Alignment:
Q  296 atacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtag 358  Q
    |||||| || || ||||| |||||||| ||| ||||||||| | |||||||||||||||||||    
T  41758593 atacatggacatttttaggtggtaatataccttttgacacctatataaaaatctgacacgtag 41758655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 286 - 388
Target Start/End: Original strand, 37038477 - 37038579
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37038477 tagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 37038576  T
Q  386 tct 388  Q
    |||    
T  37038577 tct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 34012396 - 34012289
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  388 tcttttct 395  Q
    ||||||||    
T  34012296 tcttttct 34012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 1180040 - 1179933
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  388 tcttttct 395  Q
    ||||||||    
T  1179940 tcttttct 1179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 40424048 - 40423936
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| ||||||||||||||||||| | |||| ||| |||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  40424048 tttttgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T
Q  383 ctttctcttttct 395  Q
    |||||||||||||    
T  40423948 ctttctcttttct 40423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 289 - 392
Target Start/End: Original strand, 5957831 - 5957934
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||||||||| ||  |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  389 cttt 392  Q
    ||||    
T  5957931 cttt 5957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 12831047 - 12831154
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  388 tcttttct 395  Q
    ||||||||    
T  12831147 tcttttct 12831154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 15197333 - 15197440
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |   |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  388 tcttttct 395  Q
    ||||||||    
T  15197433 tcttttct 15197440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 395
Target Start/End: Complemental strand, 10621182 - 10621080
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  393 tct 395  Q
    |||    
T  10621082 tct 10621080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 14547921 - 14548029
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||||| |||||||||| | | |||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  14547921 agagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 14548020  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  14548021 ctcttttct 14548029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 504221 - 504114
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  388 tcttttct 395  Q
    ||||||||    
T  504121 tcttttct 504114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 43414681 - 43414574
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||||||| || ||||||||||||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  388 tcttttct 395  Q
    ||||||||    
T  43414581 tcttttct 43414574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 44507189 - 44507080
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | | |||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||    
T  44507189 tagagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactt 44507090  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  44507089 tctcttttct 44507080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 23122697 - 23122590
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||  ||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  388 tcttttct 395  Q
    ||||||||    
T  23122597 tcttttct 23122590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 15048281 - 15048177
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  388 tctttt 393  Q
    ||||||    
T  15048182 tctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 8841499 - 8841428
Alignment:
Q  321 tacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  8841499 tacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 10284700 - 10284627
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  10284700 aatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 4854964 - 4854856
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||| ||| |||||||||||| ||||| |||||||||||||| | || | ||| |||| || |||||||||||||||    
T  4854964 agagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacacttt 4854865  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  4854864 ctcttttct 4854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 9122229 - 9122292
Alignment:
Q  332 acacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttct 9122292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 279 - 392
Target Start/End: Complemental strand, 15259039 - 15258925
Alignment:
Q  279 tttatttta-gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaa 377  Q
    ||||||||| |||| ||||||||||||||   |||||||| |||||| || | |||| |||||||||||||||||| || |||||||||| || ||||||    
T  15259039 tttattttaagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaa 15258940  T
Q  378 gcacactttctcttt 392  Q
    ||||| |||||||||    
T  15258939 gcacattttctcttt 15258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgt 356  Q
    ||||||||||||||||| ||| |||| ||| ||||||| ||||||||||||||||||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 16383376 - 16383481
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  16383376 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 16383475  T
Q  387 ctcttt 392  Q
    ||||||    
T  16383476 ctcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 34307215 - 34307320
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  || | |||||||||| |||||||    
T  34307215 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacacttt 34307314  T
Q  387 ctcttt 392  Q
    ||||||    
T  34307315 ctcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 42221514 - 42221619
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||| | ||| |||| ||  ||||||  | | |||||||||| |||||||||||||||| |||  |||| |||  |||||||||||||    
T  42221514 agagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacacttt 42221613  T
Q  387 ctcttt 392  Q
    ||||||    
T  42221614 ctcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 30479574 - 30479470
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| | | | |||| ||| |||||||||||||||| |||||||||||||||||| || |  |  |||| | |||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  388 tcttt 392  Q
    |||||    
T  30479474 tcttt 30479470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 38229470 - 38229532
Alignment:
Q  330 tgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||||| |||||||||||| || ||||||||||| | | ||||||||| |||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctcttt 38229532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 16056470 - 16056397
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||| || |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||||||||    
T  16056470 aatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 24307894 - 24307789
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| |||||| || |||||||||||| |||||||||| | || | ||  |||| |||||||||| |||||||    
T  24307894 agagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacacttt 24307795  T
Q  387 ctcttt 392  Q
    ||||||    
T  24307794 ctcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 17443822 - 17443929
Alignment:
Q  285 ttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 384  Q
    ||||||| |||||||||||| | | |||| ||  |||||||   || |||| |||| |||||||||||| ||||||| ||||| ||| |||||  |||||    
T  17443822 ttagagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacact 17443921  T
Q  385 ttctcttt 392  Q
    ||||||||    
T  17443922 ttctcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 32032723 - 32032828
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||| | | | |||| ||| |||||| |||| |||| ||||| |||||||||||| || | ||  ||||||| ||||||| ||||||    
T  32032723 tagagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactt 32032821  T
Q  386 tctcttt 392  Q
    |||||||    
T  32032822 tctcttt 32032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 42354636 - 42354584
Alignment:
Q  340 ataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||||||||  ||| ||||||| | || |||||||||||||||||    
T  42354636 ataaaaatctgacacgtgttcatgtggatctcacataagcacactttctcttt 42354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 5e-41; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 3434560 - 3434669
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  3434560 tagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactt 3434659  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  3434660 tctcttttct 3434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 8080484 - 8080376
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8080484 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 8080385  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  8080384 ctcttttct 8080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 36362024 - 36362133
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | | |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  36362024 tagagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36362123  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  36362124 tctcttttct 36362133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 7389388 - 7389496
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  7389388 agagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 7389487  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  7389488 ctcttttct 7389496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 19436288 - 19436180
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||| ||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  19436288 agagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacacttt 19436189  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  19436188 ctcttttct 19436180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 19329842 - 19329949
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| ||| |||| ||| |||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  388 tcttttct 395  Q
    ||||||||    
T  19329942 tcttttct 19329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 36362015 - 36361906
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | | |||| ||| |||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  36362015 tagagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36361916  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  36361915 tctcttttct 36361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 291 - 395
Target Start/End: Original strand, 3783998 - 3784102
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| | | |||| ||| |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  391 tttct 395  Q
    |||||    
T  3784098 tttct 3784102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 283 - 395
Target Start/End: Original strand, 38267035 - 38267147
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| ||||||||||||||||| | | |||  ||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  38267035 tttttgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T
Q  383 ctttctcttttct 395  Q
    |||||||||||||    
T  38267135 ctttctcttttct 38267147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 4999614 - 4999509
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||||||| |||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  388 tctttt 393  Q
    ||||||    
T  4999514 tctttt 4999509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 38837216 - 38837324
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  38837216 agagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38837315  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  38837316 ctcttttct 38837324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 40957706 - 40957814
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| |   |||| ||| ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  40957706 agagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacacttt 40957805  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  40957806 ctcttttct 40957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 35137533 - 35137640
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||| ||||| | | |||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  388 tcttttct 395  Q
    ||||||||    
T  35137633 tcttttct 35137640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 319 - 395
Target Start/End: Original strand, 3694398 - 3694474
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    |||||||| ||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3694398 aatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttct 3694474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 289 - 395
Target Start/End: Complemental strand, 32951592 - 32951486
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||||||||| |   |||||||  |||||| ||||| ||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  389 cttttct 395  Q
    |||||||    
T  32951492 cttttct 32951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 46033903 - 46033794
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||||||||  |||| ||| |||||||||||| ||||||||||||||||||||||||| ||||| || |  ||||||||||| | ||    
T  46033903 tagagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattt 46033804  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  46033803 tctcttttct 46033794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 35522881 - 35522983
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| ||| |||  ||| |||||||| ||| ||||||||| ||||||||||||||| | ||  |||||||||||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T
Q  393 tct 395  Q
    |||    
T  35522981 tct 35522983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 8238244 - 8238317
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||| |||||||||| |||||||||||||    
T  8238244 aatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 41423682 - 41423786
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||||||||||||||||  |||||||  ||| |||||||||||| || ||||||| ||||||| ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  388 tcttt 392  Q
    |||||    
T  41423782 tcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 391
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||  ||||||||||||||||| |||| |||||| |||||||||| ||| || | |||||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  388 tctt 391  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| |||||||||||| ||| |||| ||| || ||||||||| ||||||||| ||||||||||||||| | ||| |||| ||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 35468956 - 35468851
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||||||| |||||| | |||||||||||||||||||||| | | ||   || ||||| || |||||| ||||||||    
T  35468956 agagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacacttt 35468857  T
Q  387 ctcttt 392  Q
    ||||||    
T  35468856 ctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 36208172 - 36208277
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| | | |||| ||||||||||  | |||||||||||| ||||| |||||| || |||||||||| || ||||||||||| |||    
T  36208172 agagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacatttt 36208271  T
Q  387 ctcttt 392  Q
    ||||||    
T  36208272 ctcttt 36208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 16374893 - 16374820
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||| || |||||| ||||| ||||||||||||||| |||||||||||| | ||||||||||| ||||||||    
T  16374893 aatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctcttt 16374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 26296642 - 26296751
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||||| ||| |||| ||  |||| ||||||| ||| |||||||||||||||| |||| | ||  |||| ||||||||||| || ||    
T  26296642 tagagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattt 26296741  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  26296742 tctcttttct 26296751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 38044196 - 38044301
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||| ||||| |||||||||||| |||| ||  |||| |||||||||| |||||||    
T  38044196 agagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacacttt 38044295  T
Q  387 ctcttt 392  Q
    ||||||    
T  38044296 ctcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 11044187 - 11044282
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||| ||||||||||||          |||||||||||||||||||| |||||||||| |||||||    
T  11044187 agagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacacttt 11044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 22343359 - 22343465
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| ||   ||  |||| |||||||||| ||||||    
T  22343359 tagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 22343458  T
Q  386 tctcttt 392  Q
    |||||||    
T  22343459 tctcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 41915739 - 41915845
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||| | | | |||| ||| ||||||||| |||||||| ||| |||||||||||| || | ||  |||| |||||||||| ||||||    
T  41915739 tagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 41915838  T
Q  386 tctcttt 392  Q
    |||||||    
T  41915839 tctcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 7727905 - 7728006
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||||||||||||  ||||||  ||||||||||||||||| || ||||  |||| |||||||||| |||||||    
T  7727905 agagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 7728004  T
Q  387 ct 388  Q
    ||    
T  7728005 ct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 18207179 - 18207283
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| | | |||| ||| ||||||||  |||||||||| | |||||||| |||||| | |||||| | ||| ||||||||||||||    
T  18207179 agagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacacttt 18207277  T
Q  387 ctcttt 392  Q
    ||||||    
T  18207278 ctcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 31735884 - 31735984
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| ||||||| |||| ||||||||| |||       ||||| | ||| ||||||||||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa-------cacgtggccacatggatcccgcacaagcacactttc 31735976  T
Q  388 tcttttct 395  Q
    ||||||||    
T  31735977 tcttttct 31735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  322 acaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    ||||||||||| ||||||| |||||||||||| || | |||||||||||| || ||||||| |||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 40846213 - 40846109
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| | ||| |||| ||| ||||||||| |||||| ||||| |||||||| ||| ||||| |  |||| |||||||||  ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  388 tcttt 392  Q
    |||||    
T  40846113 tcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 392
Target Start/End: Complemental strand, 32564536 - 32564422
Alignment:
Q  278 atttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaa 377  Q
    |||| |||| |||| |||||||||| | ||  |||| ||| ||||||||| |||||||||||| |||||||||||| || |  |  |||| |||||||||    
T  32564536 atttctttttgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaa 32564437  T
Q  378 gcacactttctcttt 392  Q
      |||||||||||||    
T  32564436 atacactttctcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 39256023 - 39255920
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| | | |||| ||| ||||||||  |||| ||||| | ||||||||||||||| | ||||||||  || |||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  388 tcttt 392  Q
    |||||    
T  39255924 tcttt 39255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 10343664 - 10343597
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacac 354  Q
    |||||||||||||||||| | | |||| ||| |||||||   |||||||||||| |||||||||||||    
T  10343664 agagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 11511567 - 11511455
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| ||||||||||||||||| | | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11511567 tttttgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T
Q  383 ctttctcttttct 395  Q
    |||||||||||||    
T  11511467 ctttctcttttct 11511455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 50052529 - 50052424
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  50052529 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50052430  T
Q  387 ctcttt 392  Q
    ||||||    
T  50052429 ctcttt 50052424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 6034044 - 6034151
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  388 tcttttct 395  Q
    ||||||||    
T  6034144 tcttttct 6034151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 48183150 - 48183042
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  48183150 agagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48183051  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  48183050 ctcttttct 48183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 29234348 - 29234238
Alignment:
Q  285 ttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 384  Q
    |||||||||||||||||||| | | |||||||| |||||||||||||| |||  || |||||||||||||||||||||||||| ||||||||||||||||    
T  29234348 ttagagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 29234249  T
Q  385 ttctcttttct 395  Q
    |||||||||||    
T  29234248 ttctcttttct 29234238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 480548 - 480440
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  480548 agagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 480449  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  480448 ctcttttct 480440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 24995208 - 24995100
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||| || || | | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||    
T  24995208 agagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacatttt 24995109  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  24995108 ctcttttct 24995100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  388 t 388  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 41236347 - 41236454
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  388 tcttttct 395  Q
    ||||||||    
T  41236447 tcttttct 41236454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 3481654 - 3481758
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | |||||| ||| ||||||| |||||||||||||| ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  388 tcttt 392  Q
    |||||    
T  3481754 tcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 42044468 - 42044360
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||| ||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  42044468 agagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 42044369  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  42044368 ctcttttct 42044360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 40574779 - 40574886
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||||  |  || ||||||||| ||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  388 tcttttct 395  Q
    ||||||||    
T  40574879 tcttttct 40574886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 54473633 - 54473526
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||  |||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  388 tcttttct 395  Q
    ||||||||    
T  54473533 tcttttct 54473526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 29239885 - 29239990
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  29239885 agagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacacttt 29239984  T
Q  387 ctcttt 392  Q
    ||||||    
T  29239985 ctcttt 29239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 31910192 - 31910299
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||  ||||||| |||||||||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  388 tcttttct 395  Q
    ||||||||    
T  31910292 tcttttct 31910299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 23608234 - 23608340
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||| ||||| | | |||||||  |||||||| ||||||||||||| |||||||||||||||||||||||| |  || ||||||||||||||    
T  23608234 agagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacacttt 23608333  T
Q  387 ctctttt 393  Q
    |||||||    
T  23608334 ctctttt 23608340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 41823920 - 41823989
Alignment:
Q  326 cctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttct 41823989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 29977884 - 29977989
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||| | | |  ||| ||| ||||||||| || ||||||||| ||||||||||||||||||||  |||| ||| ||||||||||||||    
T  29977884 agagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacacttt 29977983  T
Q  387 ctcttt 392  Q
    ||||||    
T  29977984 ctcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 50813970 - 50813888
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || ||||  || | |||||||||| |||||||||||||    
T  50813970 ttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 48647795 - 48647722
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||  || |||||||||||||||||| |||||| ||||||||||  ||||||||||||| |||||||||    
T  48647795 aatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctcttt 48647722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 55475190 - 55475295
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | ||| |||| ||| |||||||||||||||||||||| |||||||||||| || | ||  |||| || ||| ||| |||||||    
T  55475190 agagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacacttt 55475289  T
Q  387 ctcttt 392  Q
    ||||||    
T  55475290 ctcttt 55475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 53352627 - 53352559
Alignment:
Q  327 ctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttct 395  Q
    |||| ||||| ||| |||||||||||||||||| | ||||| |||||||||||| ||||||||||||||    
T  53352627 ctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttttct 53352559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 17983821 - 17983739
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 29548065 - 29547955
Alignment:
Q  282 attttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcac 381  Q
    |||| ||||| |||||||||| | ||| |||| ||| |||||| || |||||||||||| |||||||||||| || | ||  ||||||||||| ||| ||    
T  29548065 atttaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtac 29547966  T
Q  382 actttctcttt 392  Q
    ||||| |||||    
T  29547965 actttttcttt 29547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 8343268 - 8343159
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| |||| |||||||||| | ||| |||| ||| |||||| ||||||||||| |||||||||||||||| || | ||  |||| |||||| ||| | |    
T  8343268 ttttcgagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtata 8343169  T
Q  383 ctttctcttt 392  Q
    ||||||||||    
T  8343168 ctttctcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 19670817 - 19670712
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| ||||||| |||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  19670817 agagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 19670718  T
Q  387 ctcttt 392  Q
    ||||||    
T  19670717 ctcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 47986206 - 47986312
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||| | | | |||| ||| |||||| || |||||| ||||| |||||||||||| || | ||  |||| |||||||||| ||||||    
T  47986206 tagagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 47986305  T
Q  386 tctcttt 392  Q
    |||||||    
T  47986306 tctcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 32766980 - 32767062
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||| ||||||||| |||||||||| | |||||||||||| || | ||  |||| || ||||||| |||||||||||||    
T  32766980 ttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 28480324 - 28480267
Alignment:
Q  332 acacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctc 389  Q
    |||| |||| |||||||||||| ||||||| ||||| ||| ||||| |||||||||||    
T  28480324 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 28481199 - 28481142
Alignment:
Q  332 acacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctc 389  Q
    |||| |||| |||||||||||| ||||||| ||||| ||| ||||| |||||||||||    
T  28481199 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 28482074 - 28482017
Alignment:
Q  332 acacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctc 389  Q
    |||| |||| |||||||||||| ||||||| ||||| ||| ||||| |||||||||||    
T  28482074 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 29589809 - 29589736
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||| |||||||||||| |||||||||| | || | ||  |||| ||| |||||| |||||||||||||    
T  29589809 aatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 47104543 - 47104612
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgt 356  Q
    |||||||||||| ||||| ||  |||||||  ||||||| || ||||||||||| |||||| ||||||||    
T  47104543 agagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgt 47104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 44536849 - 44536742
Alignment:
Q  284 tttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    |||||||| |||||||||| | |  ||||| ||| ||||||||||| |||| ||||| |||||||||||| || ||||  | || ||| || ||| ||||    
T  44536849 tttagagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacac 44536751  T
Q  384 tttctcttt 392  Q
    |||||||||    
T  44536750 tttctcttt 44536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 56300225 - 56300161
Alignment:
Q  328 tttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||| ||||| |||||||||||| || ||||  || |||| |||||| ||||||||||||||    
T  56300225 tttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctcttt 56300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 27714992 - 27714888
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  27714992 agagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 27714893  T
Q  387 ctctt 391  Q
    |||||    
T  27714892 ctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 49607413 - 49607521
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  49607413 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacacttt 49607512  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  49607513 ctcttttct 49607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 48587187 - 48587084
Alignment:
Q  292 aatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctt 391  Q
    ||||||||||||||| | |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  392 ttct 395  Q
    ||||    
T  48587087 ttct 48587084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 53982011 - 53982118
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  388 tcttttct 395  Q
    ||||||||    
T  53982111 tcttttct 53982118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 33644200 - 33644307
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | || | ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  388 tcttttct 395  Q
    ||||||||    
T  33644300 tcttttct 33644307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 17470403 - 17470512
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| | |||||| ||| |||||||| ||| ||||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  17470403 tagagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 17470502  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  17470503 tctcttttct 17470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 293 - 395
Target Start/End: Original strand, 52629305 - 52629407
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  393 tct 395  Q
    |||    
T  52629405 tct 52629407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 54868996 - 54868888
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||||    
T  54868996 agagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 54868897  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  54868896 ctcttttct 54868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 31456690 - 31456796
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||||||||| | |  |||  || |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  389 cttttct 395  Q
    |||||||    
T  31456790 cttttct 31456796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 8076393 - 8076497
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||| | | | |||| ||| | |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  388 tcttt 392  Q
    |||||    
T  8076493 tcttt 8076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 26141632 - 26141525
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||| ||| |||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||| |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  388 tcttttct 395  Q
    ||||||||    
T  26141532 tcttttct 26141525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 9562997 - 9563106
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||| | | | |||||||  |||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  9562997 tagagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactt 9563096  T
Q  386 tctcttttct 395  Q
    ||||| ||||    
T  9563097 tctctcttct 9563106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 11095454 - 11095348
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||  | |||||| || ||||||||    
T  11095454 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacacttt 11095357  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  11095356 ctcttttct 11095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 24700059 - 24699950
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||||||||||||||| ||||| | |||||||| || | |||| ||||    
T  24700059 ttttagagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacaca 24699960  T
Q  383 ctttctcttt 392  Q
    ||||||||||    
T  24699959 ctttctcttt 24699950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 36707525 - 36707421
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||||| | |||| ||  |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||    |||||||||    
T  36707525 agagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacacttt 36707430  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  36707429 ctcttttct 36707421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 277 - 395
Target Start/End: Complemental strand, 20765025 - 20764908
Alignment:
Q  277 catttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcaca 376  Q
    |||||||||| |||| |||| ||||||| ||| |||| ||||||||||| |||| ||||||||| ||||||||||||||| | ||| |||| |||| |||    
T  20765025 catttatttt-gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtaca 20764927  T
Q  377 agcacactttctcttttct 395  Q
    |||||||||||||||||||    
T  20764926 agcacactttctcttttct 20764908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 33118952 - 33118847
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| | | |||| ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||| || || ||||||||    
T  33118952 agagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacacttt 33118853  T
Q  387 ctcttt 392  Q
    ||||||    
T  33118852 ctcttt 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||  ||| ||||| | | |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  388 tcttt 392  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 41189865 - 41189757
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | ||| |||| ||| |||||| | |||||||||||||||||||| |||||||| | ||| |||| ||||||||||||||||||    
T  41189865 agagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacacttt 41189766  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  41189765 ctcttttct 41189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 51419460 - 51419353
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||||||  |||||| ||||| ||||||||| ||||||||||||||| | ||| | || |||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  388 tcttttct 395  Q
    ||||||||    
T  51419360 tcttttct 51419353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 13898154 - 13898051
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    |||||||||| ||| | ||| |||| ||| ||||||||| ||||||||||||||||||||||||||||  ||| ||||| | | ||||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  389 cttt 392  Q
    ||||    
T  13898054 cttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 35536624 - 35536730
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| ||| |||  ||| |||||||| |||||||||||||||||||| |||||||| |||| ||||| |   |||||||||||||    
T  35536624 tagagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacactt 35536723  T
Q  386 tctcttt 392  Q
     ||||||    
T  35536724 cctcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 11348023 - 11347915
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| ||| |||| ||  |||||| ||||||||| ||||| ||||||||||||||| | ||| |||| || ||| |||||||||||    
T  11348023 agagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacacttt 11347924  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  11347923 ctcttttct 11347915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 47531865 - 47531972
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||||| ||| |||||||| |||||||| ||| ||| ||||| || |||||||||||| | ||  || | |||||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  388 tcttttct 395  Q
    ||||||||    
T  47531965 tcttttct 47531972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 8956760 - 8956866
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    ||||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||||||| ||||||||  ||| ||||| |   |||||||||||||    
T  8956760 tagagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacactt 8956859  T
Q  386 tctcttt 392  Q
     ||||||    
T  8956860 cctcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 392
Target Start/End: Complemental strand, 30801843 - 30801729
Alignment:
Q  278 atttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaa 377  Q
    |||| |||| ||| ||||||||||||| | | |||| || ||||||||||||||| ||||||| |||||| ||||| |||||||  |||| ||| |||||    
T  30801843 atttttttttgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaa 30801744  T
Q  378 gcacactttctcttt 392  Q
    ||||| |||||||||    
T  30801743 gcacattttctcttt 30801729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 35965875 - 35965778
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||| | ||| |||  || ||||||| |||||||||||||||||||||||||||        |||||||||| |||||||||||||||    
T  35965875 agagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgac--------acgtggatcctgcacaagcacacttt 35965784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 26754700 - 26754799
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||| |||||| | | |||| ||| ||||||||||| |||| ||||| |||||||||||| || ||||| |||| |||||||||||||| |||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 41080709 - 41080811
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| ||| |||| | | || ||||||||||||||||||  |||||||||| | || |||| ||||| ||| |||||||||| ||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  388 tcttt 392  Q
    |||||    
T  41080807 tcttt 41080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 36331407 - 36331325
Alignment:
Q  310 ttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||| ||| ||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 42823138 - 42823215
Alignment:
Q  315 tggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||||||| |||||||||||| |||||| ||||| || ||||  |||| |||||| ||| | |||||||||||    
T  42823138 tggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctcttt 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 11907370 - 11907478
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| | | |||| ||  ||||||| | |  |||| |||| |||||||||||| || ||||  |||| |||||||||||||| |||    
T  11907370 agagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacatttt 11907469  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  11907470 ctcttttct 11907478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 45058652 - 45058549
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| | | | |||| ||| ||||||||||| ||||||||||||||||||||||| ||   ||  |||| |||||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  388 tcttt 392  Q
    |||||    
T  45058553 tcttt 45058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 43745755 - 43745827
Alignment:
Q  297 tacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatc 369  Q
    |||||| ||||| |||  ||| ||||||| |||||||| |||| ||||||| ||||||||  |||||||||||    
T  43745755 tacataaatatccttaagtggcaatacactctttgacatccacgtaaaaatttgacacgtcatcacgtggatc 43745827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 276 - 395
Target Start/End: Original strand, 4017 - 4136
Alignment:
Q  276 tcatttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcac 375  Q
    |||||| |||| ||||||||||||||||| | |||||||||| |||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||     
T  4017 tcattttttttggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcat 4116  T
Q  376 aagcacactttctcttttct 395  Q
    ||||||||||||||||||||    
T  4117 aagcacactttctcttttct 4136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 276 - 395
Target Start/End: Original strand, 29857815 - 29857934
Alignment:
Q  276 tcatttattttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcac 375  Q
    |||||| |||| ||||||||||||||||| | |||||||||| |||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||||     
T  29857815 tcattttttttggagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcat 29857914  T
Q  376 aagcacactttctcttttct 395  Q
    ||||||||||||||||||||    
T  29857915 aagcacactttctcttttct 29857934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 32869678 - 32869785
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||||| |||||||||| | | |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  388 tcttttct 395  Q
    ||||||||    
T  32869778 tcttttct 32869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 11427614 - 11427725
Alignment:
Q  286 tagagtaatgatacatagatatc--tttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacac 383  Q
    ||||||||||||||||||| | |   |||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11427614 tagagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 11427713  T
Q  384 tttctcttttct 395  Q
    ||||||||||||    
T  11427714 tttctcttttct 11427725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 22880755 - 22880651
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||||||||| | | |||| ||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  391 tttct 395  Q
    |||||    
T  22880655 tttct 22880651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 23128224 - 23128120
Alignment:
Q  291 taatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 390  Q
    |||||||| ||||| | |||||  || ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctct 23128125  T
Q  391 tttct 395  Q
    |||||    
T  23128124 tttct 23128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 395
Target Start/End: Original strand, 17598554 - 17598661
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| | | |||| ||| |||||| | ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  388 tcttttct 395  Q
    ||||||||    
T  17598654 tcttttct 17598661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 31976246 - 31976355
Alignment:
Q  286 tagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 385  Q
    |||||| |||||||||||| ||| |||| ||| |||| ||||||| ||||||||| ||||||||||||||| ||||| || | |||||||||||||||||    
T  31976246 tagagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactt 31976345  T
Q  386 tctcttttct 395  Q
    ||||||||||    
T  31976346 tctcttttct 31976355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 6209566 - 6209458
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | | |||| ||| |||||||  |||||||| |||| ||||||||| |||||||||||||||| ||||||| ||||||||||    
T  6209566 agagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacacttt 6209467  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  6209466 ctcttttct 6209458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 31109505 - 31109393
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| ||||||||||  ||||| | | |||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||| ||| |||    
T  31109505 tttttgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtaca 31109406  T
Q  383 ctttctcttttct 395  Q
    |||||||||||||    
T  31109405 ctttctcttttct 31109393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 395
Target Start/End: Original strand, 946377 - 946483
Alignment:
Q  289 agtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 388  Q
    ||||| |||||||||| ||| |||| || ||||||||||||||||||| ||  ||||||||||||| |||||||||  ||||||| | ||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttct 946476  T
Q  389 cttttct 395  Q
    |||||||    
T  946477 cttttct 946483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 31110860 - 31110754
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| ||| |||| ||| ||||||||||||||||| ||||  |||||||||||||||  ||| |||| || |||||||||||||||    
T  31110860 agagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacacttt 31110763  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  31110762 ctcttttct 31110754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 15832576 - 15832682
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| | |||||| ||  |||| | | ||||||||||||| |||||| |||||||||||||||||||||| ||||||  ||| |||    
T  15832576 agagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacatttt 15832675  T
Q  387 ctctttt 393  Q
    |||||||    
T  15832676 ctctttt 15832682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 31953130 - 31953026
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||| ||||| ||| |||| ||| ||||||||| ||||||||||||||||||||||||| ||  ||| ||||| | | ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  388 tcttt 392  Q
    |||||    
T  31953030 tcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 28536582 - 28536483
Alignment:
Q  292 aatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctt 391  Q
    ||||||||||| | ||| |||| ||| |||||| || |||||||||||| ||||||||||||||  |||| ||||| ||| |||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 4231543 - 4231652
Alignment:
Q  283 ttttagagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 382  Q
    |||| |||| ||||| |||| | ||| |||| ||| ||||||||| ||| |||||||| ||||||||||||||| | ||  |||| |||||||||| |||    
T  4231543 tttttgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtaca 4231642  T
Q  383 ctttctcttt 392  Q
    ||||||||||    
T  4231643 ctttctcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 15990143 - 15990038
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  15990143 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15990044  T
Q  387 ctcttt 392  Q
    ||||||    
T  15990043 ctcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 30341461 - 30341356
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  30341461 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 30341362  T
Q  387 ctcttt 392  Q
    ||||||    
T  30341361 ctcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 15508124 - 15508020
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||||| | | | |||| ||| ||||||||| |||||||||||| |||||||||||| || | ||  |||| |||||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  388 tcttt 392  Q
    |||||    
T  15508024 tcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 392
Target Start/End: Complemental strand, 9379807 - 9379708
Alignment:
Q  293 atgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||||||| ||| |||||||  |||||| || |||||||||| | |||||| |||||||| | || ||||||| | ||||| |||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 12732481 - 12732586
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    |||||||||||||||||| ||  |||  ||| |||| |  | |||||||||||| ||||||||||||||| |  | ||||||||| || ||||||| |||    
T  12732481 agagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacatttt 12732580  T
Q  387 ctcttt 392  Q
    ||||||    
T  12732581 ctcttt 12732586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 30870020 - 30870118
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    |||| |||||||| ||||||| ||||||||||| |||       ||||||| |||||||||| ||| || ||||| |||| |||||||||||||| ||||    
T  30870020 gagttatgatacacagatatccttagatggtaaaacaa------acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttc 30870113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 1029 - 925
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| ||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  388 tcttt 392  Q
    |||||    
T  929 tcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 1029 - 925
Alignment:
Q  288 gagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 387  Q
    ||||||||||||||||| |||||||| ||| |||||||||||| ||| ||||| ||||| |||||||||||||||||| |||||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  388 tcttt 392  Q
    |||||    
T  929 tcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 10210 - 10102
Alignment:
Q  287 agagtaatgatacatagatatctttagatggtaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 386  Q
    ||||| |||||||||||| | |||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||| | || |||||||||||||    
T  10210 agagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacacttt 10111  T
Q  387 ctcttttct 395  Q
    |||||||||    
T  10110 ctcttttct 10102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 152529 - 152602
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    ||||||||| |||||||||||| |||||||||||| || ||||  ||||||||||||||  |||||||||||||    
T  152529 aatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 392
Target Start/End: Original strand, 17097 - 17158
Alignment:
Q  331 gacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||| ||||| |||||||||||| || ||||| |||| |||||||||||||| |||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 8932 - 8859
Alignment:
Q  319 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 392  Q
    |||||||  ||||||| | ||| |||||| |||||| |||||||||||| ||| |||||| ||| |||||||||    
T  8932 aatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttctcttt 8859  T

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