View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20964_high_17 (Length: 286)
Name: NF20964_high_17
Description: NF20964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20964_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 41874942 - 41874672
Alignment:
| Q |
1 |
aaccaagagtggggcaaataagcttgatttgtaccttagtagaaagcatgatgagcttttagcaagcactctagacccaggaagctacaagaagatatct |
100 |
Q |
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| T |
41874942 |
aaccaagagtggggcaaataagcttgatttgtaccttagtagaaagcatgatgagcttttagcaagcactctagagccaggaagctacaagaagatatct |
41874843 |
T |
|
| Q |
101 |
tcttttgctattgttgatggttttacagtggaaatcaccgaggatcaagtaatgtgtaatttgtcctcgtataaaatacaattttatctttcttgttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41874842 |
tcttttgctattgttgatggttttacagtggaaatcaccgaggatcaagtaatgtgtaatttgtcctcgtataaaatacaattttatctttcttgttttg |
41874743 |
T |
|
| Q |
201 |
atttatcatatgatatttacacatattatgtggcctatgatgttttccttttcttaattaacatgttatac |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41874742 |
atttatcatatgatatttacacatattatgtggcctatgatgttttccttttcttaattaacatgttatac |
41874672 |
T |
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