View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20964_low_22 (Length: 276)

Name: NF20964_low_22
Description: NF20964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20964_low_22
NF20964_low_22
[»] chr7 (36 HSPs)
chr7 (9-260)||(22073170-22073419)
chr7 (36-259)||(16219358-16219582)
chr7 (36-260)||(47832062-47832287)
chr7 (63-260)||(67999-68198)
chr7 (85-260)||(16056582-16056757)
chr7 (9-216)||(12255409-12255614)
chr7 (45-260)||(9389346-9389563)
chr7 (36-260)||(16324260-16324485)
chr7 (56-260)||(44014427-44014633)
chr7 (32-216)||(2279756-2279941)
chr7 (55-198)||(18005963-18006101)
chr7 (55-200)||(810790-810936)
chr7 (55-212)||(12756378-12756535)
chr7 (54-202)||(21064822-21064971)
chr7 (48-125)||(28504955-28505033)
chr7 (48-128)||(15143691-15143772)
chr7 (160-260)||(12901583-12901683)
chr7 (48-129)||(16385912-16385994)
chr7 (55-128)||(38227866-38227940)
chr7 (48-129)||(40443762-40443844)
chr7 (85-215)||(44116804-44116933)
chr7 (48-128)||(15754541-15754622)
chr7 (55-127)||(17061621-17061694)
chr7 (32-125)||(2529615-2529709)
chr7 (55-128)||(9509575-9509649)
chr7 (48-129)||(27847498-27847580)
chr7 (56-128)||(3564026-3564099)
chr7 (161-216)||(17061728-17061783)
chr7 (161-199)||(9177432-9177470)
chr7 (55-128)||(12699218-12699292)
chr7 (161-207)||(26212302-26212348)
chr7 (58-136)||(14045202-14045281)
chr7 (58-136)||(14355232-14355311)
chr7 (223-260)||(15754718-15754755)
chr7 (48-103)||(11995712-11995768)
chr7 (161-209)||(15008265-15008313)
[»] scaffold0034 (2 HSPs)
scaffold0034 (9-260)||(32790-33039)
scaffold0034 (55-128)||(51545-51619)
[»] chr6 (32 HSPs)
chr6 (9-260)||(23019661-23019910)
chr6 (36-260)||(27332926-27333151)
chr6 (36-260)||(27393666-27393891)
chr6 (48-199)||(22080391-22080543)
chr6 (36-255)||(25644582-25644801)
chr6 (55-260)||(4667874-4668080)
chr6 (63-260)||(19652448-19652647)
chr6 (45-196)||(25956272-25956424)
chr6 (55-260)||(4674721-4674927)
chr6 (161-260)||(4185591-4185690)
chr6 (55-260)||(4189210-4189416)
chr6 (55-260)||(29808544-29808751)
chr6 (55-215)||(18457014-18457174)
chr6 (161-260)||(19668627-19668726)
chr6 (55-128)||(28496134-28496208)
chr6 (164-260)||(31155169-31155265)
chr6 (55-129)||(20360632-20360707)
chr6 (48-129)||(20637948-20638030)
chr6 (48-128)||(1561689-1561770)
chr6 (32-136)||(9098087-9098192)
chr6 (55-125)||(19303202-19303273)
chr6 (48-129)||(18821484-18821566)
chr6 (55-128)||(22779888-22779962)
chr6 (48-129)||(16920298-16920380)
chr6 (161-199)||(17106048-17106086)
chr6 (55-128)||(18409488-18409562)
chr6 (223-260)||(1561556-1561593)
chr6 (161-194)||(18177438-18177471)
chr6 (161-194)||(18204400-18204433)
chr6 (32-124)||(20109605-20109698)
chr6 (88-128)||(25629050-25629090)
chr6 (55-128)||(29060926-29061000)
[»] scaffold0078 (1 HSPs)
scaffold0078 (32-260)||(10782-11011)
[»] scaffold0556 (2 HSPs)
scaffold0556 (9-260)||(8270-8519)
scaffold0556 (55-260)||(7064-7271)
[»] chr4 (32 HSPs)
chr4 (36-260)||(39705930-39706155)
chr4 (32-260)||(15099603-15099833)
chr4 (45-260)||(15190570-15190787)
chr4 (9-216)||(52242811-52243016)
chr4 (32-216)||(15464567-15464752)
chr4 (32-185)||(43198226-43198380)
chr4 (56-260)||(8846627-8846834)
chr4 (45-199)||(13844854-13845009)
chr4 (63-216)||(44928592-44928746)
chr4 (55-260)||(12774252-12774458)
chr4 (32-136)||(15868273-15868378)
chr4 (54-128)||(16597031-16597106)
chr4 (161-215)||(21815070-21815124)
chr4 (161-215)||(21815399-21815453)
chr4 (161-215)||(21818492-21818546)
chr4 (36-136)||(13415-13516)
chr4 (54-129)||(3097017-3097093)
chr4 (37-126)||(32851839-32851929)
chr4 (66-129)||(12903131-12903195)
chr4 (48-129)||(14052967-14053049)
chr4 (161-200)||(13617-13656)
chr4 (55-128)||(16239653-16239728)
chr4 (161-216)||(44102508-44102563)
chr4 (55-128)||(6190819-6190893)
chr4 (68-129)||(7089251-7089313)
chr4 (55-124)||(14039039-14039109)
chr4 (48-128)||(15552199-15552280)
chr4 (48-128)||(24029127-24029208)
chr4 (161-205)||(7089185-7089229)
chr4 (161-205)||(17047841-17047885)
chr4 (220-260)||(43198381-43198421)
chr4 (220-260)||(53081976-53082016)
[»] chr5 (27 HSPs)
chr5 (36-260)||(21329137-21329363)
chr5 (9-260)||(26011652-26011901)
chr5 (32-260)||(21741181-21741411)
chr5 (9-216)||(22144348-22144553)
chr5 (32-250)||(5888813-5889033)
chr5 (55-260)||(22959194-22959401)
chr5 (161-259)||(21501922-21502019)
chr5 (55-260)||(21565797-21566004)
chr5 (36-158)||(21498659-21498782)
chr5 (55-260)||(19669152-19669360)
chr5 (55-205)||(23390157-23390309)
chr5 (55-216)||(11580906-11581068)
chr5 (55-128)||(21985808-21985882)
chr5 (48-216)||(1096765-1096934)
chr5 (164-255)||(21871342-21871433)
chr5 (164-255)||(21875622-21875713)
chr5 (161-216)||(36154596-36154651)
chr5 (48-129)||(21292635-21292717)
chr5 (48-128)||(19660491-19660572)
chr5 (48-128)||(21871225-21871306)
chr5 (48-128)||(21875505-21875586)
chr5 (65-128)||(9078338-9078402)
chr5 (45-127)||(36154479-36154562)
chr5 (55-128)||(24529607-24529681)
chr5 (161-199)||(25744036-25744074)
chr5 (32-136)||(20026501-20026606)
chr5 (48-128)||(22119847-22119928)
[»] scaffold0507 (1 HSPs)
scaffold0507 (32-260)||(7695-7924)
[»] chr8 (31 HSPs)
chr8 (36-260)||(38854893-38855118)
chr8 (32-238)||(39834107-39834315)
chr8 (123-260)||(21285852-21285989)
chr8 (63-260)||(23760509-23760707)
chr8 (36-260)||(6520622-6520847)
chr8 (68-200)||(19801101-19801234)
chr8 (63-260)||(21673958-21674157)
chr8 (63-260)||(26355367-26355566)
chr8 (55-216)||(41598482-41598644)
chr8 (45-124)||(21491382-21491462)
chr8 (48-125)||(5865931-5866009)
chr8 (48-125)||(17141302-17141380)
chr8 (42-136)||(13507657-13507752)
chr8 (42-136)||(13597189-13597284)
chr8 (55-229)||(23406665-23406841)
chr8 (54-129)||(45130691-45130767)
chr8 (55-128)||(18878898-18878972)
chr8 (32-125)||(20499049-20499143)
chr8 (48-128)||(20536594-20536675)
chr8 (9-80)||(21286656-21286724)
chr8 (48-128)||(21918664-21918745)
chr8 (55-128)||(6759643-6759717)
chr8 (55-128)||(7373135-7373209)
chr8 (55-128)||(18818071-18818145)
chr8 (161-207)||(20536514-20536560)
chr8 (55-124)||(22627125-22627195)
chr8 (48-129)||(31971629-31971711)
chr8 (48-128)||(21255605-21255686)
chr8 (43-124)||(17266565-17266647)
chr8 (163-215)||(21414997-21415049)
chr8 (85-129)||(25362843-25362887)
[»] scaffold0138 (1 HSPs)
scaffold0138 (48-260)||(13194-13407)
[»] scaffold0020 (1 HSPs)
scaffold0020 (45-260)||(15481-15698)
[»] scaffold0333 (2 HSPs)
scaffold0333 (36-260)||(6866-7092)
scaffold0333 (36-260)||(14246-14472)
[»] chr3 (46 HSPs)
chr3 (48-259)||(15471179-15471391)
chr3 (32-260)||(1465047-1465277)
chr3 (44-260)||(324489-324706)
chr3 (32-212)||(2050839-2051018)
chr3 (36-259)||(14234745-14234969)
chr3 (9-216)||(52523345-52523550)
chr3 (55-216)||(17247947-17248109)
chr3 (55-260)||(12933971-12934178)
chr3 (63-260)||(16097583-16097782)
chr3 (55-260)||(32307922-32308128)
chr3 (161-260)||(37250934-37251033)
chr3 (32-215)||(42386710-42386894)
chr3 (55-215)||(53070360-53070520)
chr3 (161-260)||(12171872-12171972)
chr3 (55-127)||(49389305-49389378)
chr3 (44-136)||(605941-606034)
chr3 (48-128)||(14179708-14179789)
chr3 (65-260)||(49667754-49667951)
chr3 (63-260)||(1644352-1644550)
chr3 (55-125)||(9513299-9513370)
chr3 (55-125)||(9521274-9521345)
chr3 (162-260)||(13210096-13210195)
chr3 (66-128)||(14572974-14573037)
chr3 (65-207)||(40213392-40213535)
chr3 (55-128)||(11424424-11424498)
chr3 (55-128)||(18438920-18438994)
chr3 (48-129)||(20698101-20698183)
chr3 (223-261)||(49389459-49389497)
chr3 (37-126)||(14501587-14501677)
chr3 (161-229)||(14572873-14572941)
chr3 (55-126)||(16104168-16104240)
chr3 (43-136)||(23275119-23275213)
chr3 (35-136)||(23412814-23412916)
chr3 (66-128)||(14576505-14576568)
chr3 (66-128)||(17488243-17488306)
chr3 (66-128)||(17499725-17499788)
chr3 (161-199)||(606135-606173)
chr3 (55-128)||(25476046-25476120)
chr3 (55-128)||(26687273-26687347)
chr3 (43-136)||(43927558-43927652)
chr3 (48-128)||(12340138-12340219)
chr3 (55-123)||(14973245-14973314)
chr3 (45-125)||(22109926-22110007)
chr3 (65-128)||(13442660-13442724)
chr3 (163-207)||(23083132-23083176)
chr3 (37-126)||(45797631-45797721)
[»] chr1 (30 HSPs)
chr1 (48-260)||(22921521-22921735)
chr1 (32-260)||(35981325-35981554)
chr1 (55-260)||(52927642-52927848)
chr1 (85-260)||(20637103-20637279)
chr1 (32-250)||(28194086-28194306)
chr1 (55-260)||(33681262-33681469)
chr1 (55-260)||(22237883-22238089)
chr1 (58-259)||(20248531-20248734)
chr1 (45-158)||(43697716-43697830)
chr1 (165-260)||(49261594-49261690)
chr1 (55-260)||(21754290-21754495)
chr1 (55-209)||(433312-433467)
chr1 (161-216)||(26065238-26065293)
chr1 (48-129)||(22355839-22355921)
chr1 (48-129)||(22357525-22357607)
chr1 (32-136)||(21895870-21895975)
chr1 (161-260)||(21861336-21861435)
chr1 (66-128)||(50209885-50209948)
chr1 (32-125)||(16759115-16759209)
chr1 (55-128)||(22532655-22532729)
chr1 (48-129)||(27250394-27250476)
chr1 (166-212)||(35260852-35260898)
chr1 (65-125)||(20918990-20919051)
chr1 (32-126)||(21342536-21342631)
chr1 (32-126)||(21347401-21347496)
chr1 (32-136)||(21861132-21861237)
chr1 (56-128)||(34510166-34510239)
chr1 (161-216)||(16758949-16759004)
chr1 (55-129)||(20846891-20846966)
chr1 (48-129)||(38801056-38801138)
[»] scaffold0810 (1 HSPs)
scaffold0810 (55-250)||(3195-3392)
[»] scaffold0010 (2 HSPs)
scaffold0010 (63-260)||(130160-130359)
scaffold0010 (161-216)||(60481-60536)
[»] scaffold0116 (2 HSPs)
scaffold0116 (48-199)||(43438-43590)
scaffold0116 (48-199)||(47358-47510)
[»] scaffold0207 (1 HSPs)
scaffold0207 (63-260)||(2313-2511)
[»] chr2 (19 HSPs)
chr2 (32-216)||(23708257-23708441)
chr2 (48-216)||(25176140-25176309)
chr2 (161-260)||(23207533-23207632)
chr2 (55-207)||(298476-298629)
chr2 (65-260)||(28406232-28406429)
chr2 (55-260)||(22133878-22134083)
chr2 (48-125)||(23071617-23071695)
chr2 (55-128)||(23660408-23660482)
chr2 (45-229)||(23076726-23076910)
chr2 (55-229)||(22737841-22738017)
chr2 (55-128)||(22730894-22730968)
chr2 (48-129)||(23654064-23654146)
chr2 (161-212)||(22412902-22412953)
chr2 (48-129)||(23286235-23286317)
chr2 (55-128)||(27753961-27754035)
chr2 (54-129)||(37787-37863)
chr2 (32-80)||(18786446-18786494)
chr2 (85-129)||(20309479-20309523)
chr2 (163-199)||(31756232-31756268)
[»] scaffold1984 (1 HSPs)
scaffold1984 (55-260)||(383-590)
[»] scaffold0102 (1 HSPs)
scaffold0102 (55-260)||(19519-19726)
[»] scaffold0621 (2 HSPs)
scaffold0621 (65-260)||(6789-6987)
scaffold0621 (161-260)||(8724-8823)
[»] scaffold0243 (1 HSPs)
scaffold0243 (32-259)||(5760-5988)
[»] scaffold0530 (1 HSPs)
scaffold0530 (32-259)||(666-900)
[»] scaffold0023 (3 HSPs)
scaffold0023 (85-260)||(39864-40040)
scaffold0023 (55-127)||(101781-101854)
scaffold0023 (223-260)||(101648-101685)
[»] scaffold0475 (1 HSPs)
scaffold0475 (55-260)||(9330-9536)
[»] scaffold0125 (1 HSPs)
scaffold0125 (55-260)||(45450-45658)
[»] scaffold0001 (1 HSPs)
scaffold0001 (55-260)||(160938-161145)
[»] scaffold0218 (2 HSPs)
scaffold0218 (161-260)||(7843-7942)
scaffold0218 (49-124)||(28935-29011)
[»] scaffold0012 (1 HSPs)
scaffold0012 (65-157)||(227849-227942)
[»] scaffold0555 (2 HSPs)
scaffold0555 (136-260)||(10283-10407)
scaffold0555 (54-114)||(10228-10289)
[»] scaffold0320 (1 HSPs)
scaffold0320 (32-181)||(12329-12478)
[»] scaffold0839 (1 HSPs)
scaffold0839 (65-216)||(1748-1900)
[»] scaffold0211 (1 HSPs)
scaffold0211 (55-260)||(28470-28677)
[»] scaffold0028 (1 HSPs)
scaffold0028 (55-260)||(132906-133113)
[»] scaffold0278 (1 HSPs)
scaffold0278 (55-148)||(5959-6053)
[»] scaffold0228 (3 HSPs)
scaffold0228 (55-128)||(4894-4968)
scaffold0228 (55-128)||(12476-12550)
scaffold0228 (55-128)||(22428-22502)
[»] scaffold0150 (1 HSPs)
scaffold0150 (55-128)||(32469-32543)
[»] scaffold0076 (1 HSPs)
scaffold0076 (43-136)||(24169-24263)
[»] scaffold0357 (1 HSPs)
scaffold0357 (160-216)||(15865-15921)
[»] scaffold0080 (2 HSPs)
scaffold0080 (161-257)||(19651-19747)
scaffold0080 (161-228)||(40198-40265)
[»] scaffold0016 (2 HSPs)
scaffold0016 (55-205)||(2159-2311)
scaffold0016 (43-122)||(119200-119280)
[»] scaffold0737 (1 HSPs)
scaffold0737 (161-260)||(1564-1663)
[»] scaffold0503 (1 HSPs)
scaffold0503 (55-215)||(12228-12388)
[»] scaffold0040 (2 HSPs)
scaffold0040 (161-260)||(103405-103504)
scaffold0040 (45-151)||(103234-103341)
[»] scaffold0021 (3 HSPs)
scaffold0021 (161-260)||(136134-136233)
scaffold0021 (161-260)||(144842-144941)
scaffold0021 (55-128)||(62947-63021)
[»] scaffold0292 (2 HSPs)
scaffold0292 (55-124)||(732-802)
scaffold0292 (65-206)||(3777-3920)
[»] scaffold0217 (2 HSPs)
scaffold0217 (55-128)||(16260-16334)
scaffold0217 (161-206)||(16368-16413)
[»] scaffold0175 (1 HSPs)
scaffold0175 (48-125)||(34509-34587)
[»] scaffold0161 (1 HSPs)
scaffold0161 (48-125)||(2099-2177)
[»] scaffold0145 (1 HSPs)
scaffold0145 (55-128)||(39145-39219)
[»] scaffold0056 (3 HSPs)
scaffold0056 (55-128)||(16876-16950)
scaffold0056 (48-127)||(79016-79096)
scaffold0056 (171-215)||(79107-79151)
[»] scaffold0876 (1 HSPs)
scaffold0876 (48-128)||(2739-2820)
[»] scaffold0142 (2 HSPs)
scaffold0142 (55-127)||(17167-17240)
scaffold0142 (161-216)||(17078-17133)
[»] scaffold0075 (3 HSPs)
scaffold0075 (36-136)||(53113-53214)
scaffold0075 (161-200)||(53315-53354)
scaffold0075 (48-128)||(7948-8029)
[»] scaffold1137 (2 HSPs)
scaffold1137 (161-260)||(2069-2169)
scaffold1137 (55-122)||(1962-2030)
[»] scaffold0647 (1 HSPs)
scaffold0647 (55-126)||(5782-5854)
[»] scaffold0628 (1 HSPs)
scaffold0628 (161-260)||(2570-2670)
[»] scaffold0598 (1 HSPs)
scaffold0598 (48-129)||(717-799)
[»] scaffold0456 (1 HSPs)
scaffold0456 (54-129)||(10097-10173)
[»] scaffold0395 (1 HSPs)
scaffold0395 (55-126)||(623-695)
[»] scaffold0165 (4 HSPs)
scaffold0165 (33-139)||(27281-27388)
scaffold0165 (161-201)||(27486-27526)
scaffold0165 (48-129)||(3855-3937)
scaffold0165 (48-129)||(7919-8001)
[»] scaffold1765 (1 HSPs)
scaffold1765 (206-260)||(1337-1391)
[»] scaffold0718 (1 HSPs)
scaffold0718 (48-129)||(4796-4878)
[»] scaffold0627 (1 HSPs)
scaffold0627 (63-128)||(290-356)
[»] scaffold0427 (1 HSPs)
scaffold0427 (48-129)||(13869-13951)
[»] scaffold0358 (2 HSPs)
scaffold0358 (48-129)||(310-392)
scaffold0358 (48-129)||(5086-5168)
[»] scaffold0352 (1 HSPs)
scaffold0352 (54-127)||(17668-17742)
[»] scaffold0305 (1 HSPs)
scaffold0305 (55-128)||(20789-20863)
[»] scaffold0266 (1 HSPs)
scaffold0266 (55-128)||(18619-18693)
[»] scaffold0235 (2 HSPs)
scaffold0235 (48-129)||(11178-11260)
scaffold0235 (35-126)||(14027-14119)
[»] scaffold0100 (1 HSPs)
scaffold0100 (55-128)||(20498-20572)
[»] scaffold0098 (1 HSPs)
scaffold0098 (37-126)||(29149-29239)
[»] scaffold0031 (1 HSPs)
scaffold0031 (55-215)||(20087-20247)
[»] scaffold0011 (2 HSPs)
scaffold0011 (55-128)||(52298-52372)
scaffold0011 (48-124)||(167644-167721)
[»] scaffold1842 (1 HSPs)
scaffold1842 (48-124)||(714-791)
[»] scaffold0351 (1 HSPs)
scaffold0351 (45-125)||(16657-16738)
[»] scaffold0261 (1 HSPs)
scaffold0261 (55-125)||(16047-16118)
[»] scaffold0122 (1 HSPs)
scaffold0122 (55-207)||(25726-25879)
[»] scaffold1419 (1 HSPs)
scaffold1419 (163-199)||(338-374)
[»] scaffold0130 (1 HSPs)
scaffold0130 (55-126)||(28924-28996)
[»] scaffold0121 (1 HSPs)
scaffold0121 (65-128)||(8203-8267)
[»] scaffold0114 (1 HSPs)
scaffold0114 (45-130)||(15127-15213)
[»] scaffold0413 (1 HSPs)
scaffold0413 (55-127)||(15276-15349)
[»] scaffold0221 (1 HSPs)
scaffold0221 (208-255)||(12623-12670)
[»] scaffold1257 (1 HSPs)
scaffold1257 (207-260)||(2030-2084)
[»] scaffold0484 (1 HSPs)
scaffold0484 (48-129)||(1288-1370)
[»] scaffold0403 (1 HSPs)
scaffold0403 (48-129)||(5222-5304)
[»] scaffold0389 (1 HSPs)
scaffold0389 (48-125)||(13262-13340)
[»] scaffold0113 (1 HSPs)
scaffold0113 (48-129)||(32438-32520)
[»] scaffold0088 (1 HSPs)
scaffold0088 (48-129)||(21275-21357)
[»] scaffold0026 (2 HSPs)
scaffold0026 (55-128)||(39592-39666)
scaffold0026 (65-128)||(40242-40306)
[»] scaffold0540 (1 HSPs)
scaffold0540 (65-121)||(684-741)
[»] scaffold0120 (1 HSPs)
scaffold0120 (65-128)||(16473-16537)
[»] scaffold0109 (1 HSPs)
scaffold0109 (32-97)||(35508-35574)
[»] scaffold0064 (1 HSPs)
scaffold0064 (48-129)||(47360-47442)
[»] scaffold0042 (1 HSPs)
scaffold0042 (65-128)||(23973-24037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (66-129)||(51953-52017)
[»] scaffold0022 (1 HSPs)
scaffold0022 (65-136)||(80716-80788)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 22073419 - 22073170
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  22073419 cagagagtcgacatggtttcgtagt---tttgccccttaagttggaccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattct 22073323  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||||||||||||||||| |||||||||||||| | |||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22073322 agaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccag 22073223  T
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  22073222 ttacagaatgctttgttaggttaaatgcgatccttgtcgcacgagttgatgtg 22073170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 259
Target Start/End: Original strand, 16219358 - 16219582
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| ||||||||||| || ||||  | ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  16219358 ttttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaatagttt 16219457  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 234  Q
    ||||| |||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||  | ||||||||||| | |||||||||||||||    
T  16219458 aagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgttaggttaaatg 16219557  T
Q  235 cgatacttgtcgcacgagttgatgt 259  Q
    ||||  ||||||||| |||||||||    
T  16219558 cgatctttgtcgcacaagttgatgt 16219582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 47832287 - 47832062
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | |||||||| ||||||||||||    
T  47832287 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaatagttt 47832188  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    |||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||| |||||||||||    
T  47832187 aagaacgaattt-tgagagttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 47832089  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
    | |||  |||||| |||||||||||||    
T  47832088 gtgatctttgtcggacgagttgatgtg 47832062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 68198 - 67999
Alignment:
Q  63 gtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaa 160  Q
    ||||| ||||||||||| |||||  |||||||||||| |||||||  ||| ||||||||||||||||||| ||||||||| || |||||||||||||| |    
T  68198 gttttcgagtgcctgaa-tatgtctaataatgattaggaaagattggagattgagattgaacctggaataatttaagaacaaacttgtgggagttacaga 68100  T
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| |||||||||||||||| |||||||||| |||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaatgcgatccttgtcgcacaagttgatgt 68000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 85 - 260
Target Start/End: Complemental strand, 16056757 - 16056582
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagagg 184  Q
    ||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||| | |||| ||||| |||||  |||||||||||| |||||||||||    
T  16056757 taataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccatagcgagtagagg 16056658  T
Q  185 ccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |  ||||||||||||||||||||||||||||| | |||||||||||||||||||  |||| |||||||||||||||    
T  16056657 ctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttgatgtg 16056582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 12255409 - 12255614
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||| ||||| | | ||||||||||||| |||||||||    
T  12255409 cagagagtcaacatgatttcgtagt---tttgatccttaagttggtatttagatgattttgagtgcttgaacatgtataataatgattaggaaagattct 12255505  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||| |||||||||||||||||||||||||||| |||||| |||||||||||  |||||||||||| ||||||||||||  |||||||||||||| |||||    
T  12255506 agattgagattgaacctggaatagtttaagaatgaatttttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccag 12255605  T
Q  208 ttacagaat 216  Q
    |||||||||    
T  12255606 ttacagaat 12255614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 260
Target Start/End: Original strand, 9389346 - 9389563
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||||| ||||| || ||||||||||| ||| |||  | |||| |||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  9389346 ttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaacgaa 9389445  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatactt 242  Q
    ||| || ||||||||  |||||||||||||||||||||||||  |||||||||||| ||  |||||||||||| | ||| |||||||||| |||||  ||    
T  9389446 tttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtttaggttaaaagcgatcttt 9389545  T
Q  243 gtcgcacgagttgatgtg 260  Q
    ||| ||||||||||||||    
T  9389546 gtcacacgagttgatgtg 9389563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 16324485 - 16324260
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||  | |||||||||||| ||||| | | ||||||||||||| |||||||  ||  |||||||||||||||||||||||    
T  16324485 ttttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaatagttt 16324386  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 234  Q
    |||||||||||| || |||||| |   ||||||||||||||||||||||||| |||||| ||||  | |||||||||||||| | |||||||||||||||    
T  16324385 aagaacgaatttttgagagttagattggaactcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttgttaggttaaatg 16324286  T
Q  235 cgatacttgtcgcacgagttgatgtg 260  Q
     ||| ||||||||| |||||||||||    
T  16324285 tgatccttgtcgcatgagttgatgtg 16324260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 56 - 260
Target Start/End: Complemental strand, 44014633 - 44014427
Alignment:
Q  56 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagt 154  Q
    |||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| |||||| ||  |||    
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgttagt 44014534  T
Q  155 tacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagt 253  Q
    | ||  |||||||||||||| ||||||||||  |||||||||||| || || |||||||||| | ||| ||||||||||||||||  ||||||||||| |    
T  44014533 tgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttgtttaggttaaatgcgatcattgtcgcacgaat 44014434  T
Q  254 tgatgtg 260  Q
    |||||||    
T  44014433 tgatgtg 44014427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 2279756 - 2279941
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    |||||||||  ||||||||||    ||||| | |||||||||||||||| |||  ||||||||||||| ||||||| |||| |||||||||||||| |||    
T  2279756 gtagttttgatccttaagttgatatttagatgattttgagtgcctgaac-atgcataataatgattaggaaagattttagattgagattgaacctgtaat 2279854  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||| | |||| |||| ||||||  |||||||||||| ||||||||||||| |||||||||||||| || ||||| |||||    
T  2279855 agtttaagaatggatttttgggtgttacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaat 2279941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 55 - 198
Target Start/End: Complemental strand, 18006101 - 18005963
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||  |||||||      |||||||||||||  ||||||||||||||||| |||||||||    
T  18006101 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaacctaaaatagtttaagaacgaacttgtgggag 18006008  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcga 198  Q
    ||| |  ||||||||||||||||| |||||||| |||||||||||    
T  18006007 ttatacctgaactcgccatggcgactagaggccctcgcctcgcga 18005963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 810790 - 810936
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| ||| ||||||||||||| |||||||  ||||| |||||||||||||||    || |||| |||||| || ||     
T  810790 ccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaagaatttagaatgaatttttgtgaa 810889  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagt 200  Q
     |  |  |||||||||||||||||||||||||  |||||||||||||    
T  810890 ctgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 212
Target Start/End: Original strand, 12756378 - 12756535
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa-tttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| || |||||||| ||| ||| ||| |    
T  12756378 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-tttaagaatgaactttttggaa 12756476  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 212  Q
    | |  |  ||||||| |||||||||||||||||  |||||||||||||| |||| |||||    
T  12756477 gct-gacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca 12756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 21064822 - 21064971
Alignment:
Q  54 accttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtggg 151  Q
    |||||||| |||| |||| |||||||| |||||  ||||||||||| ||| ||| |||||||||||||||| ||||||||| | |||| | |||| || |    
T  21064822 accttagatgtttatgagggcctgaac-atgtacaataatgattaggaaatattttagaatgagattgaacttggaatagtgtcagaatggatttttgag 21064920  T
Q  152 agttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagtta 202  Q
     |||  |  | |||||||||||||||||||||||  |||||||| ||||||    
T  21064921 tgttttaccttaactcgccatggcgagtagaggctctcgcctcgtgagtta 21064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 28504955 - 28505033
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  28504955 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 15143691 - 15143772
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||||||||||| ||||||| ||||||||||||||||||||||    
T  15143691 agttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaa 15143772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 12901683 - 12901583
Alignment:
Q  160 atgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||  ||| ||||| ||  | ||||||||||||||| || | |||||| ||||||||||||    
T  12901683 atgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacaaaacaccttgttaggttaaatgtgacatttgtcgtacgagttgatgt 12901584  T
Q  260 g 260  Q
    |    
T  12901583 g 12901583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 16385912 - 16385994
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  16385912 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 38227940 - 38227866
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  38227940 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 38227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 40443844 - 40443762
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  40443844 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 44116933 - 44116804
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagagg 184  Q
    ||||||||||||| ||||| | ||||||||||||||||| |||| || || |||| |||  | ||||| |   |  |||||||||||||||||| |||||    
T  44116933 taataatgattaggaaagaatgtagaatgagattgaacccggaa-agatttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagagg 44116835  T
Q  185 ccatcgcctcgcgagttacccagttacagaa 215  Q
    |  ||||||||||||| || |||||||||||    
T  44116834 ctctcgcctcgcgagtgactcagttacagaa 44116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 15754541 - 15754622
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| |||||   ||||||||||||||||||||||    
T  15754541 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 17061621 - 17061694
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||    
T  17061621 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 2529615 - 2529709
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| |||||    
T  2529615 gtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattggacctg 2529709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 9509649 - 9509575
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  9509649 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 9509575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 27847498 - 27847580
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | |||| |||||||| ||||| | ||| |||||||||||||||||||    
T  27847498 agttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaat 27847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 3564026 - 3564099
Alignment:
Q  56 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 3564099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 17061728 - 17061783
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    ||||||||| |||||||||||||||  ||||||||||||| ||| | |||||||||    
T  17061728 tgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 17061783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 9177432 - 9177470
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  9177432 tgaactcgccatagcgagtagaggccctcgcctcgcgag 9177470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 12699292 - 12699218
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||| |||||||||||||    
T  12699292 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 26212348 - 26212302
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  26212348 tgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 26212302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 14045281 - 14045202
Alignment:
Q  58 tagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||| ||||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | |||||||    
T  14045281 tagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 14045202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 14355311 - 14355232
Alignment:
Q  58 tagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||| ||||||||||||||||| ||||||  |||||||||||  ||| || |||| ||||||||||||||| | |||||||    
T  14355311 tagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 14355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 15754718 - 15754755
Alignment:
Q  223 ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  15754718 ttaggttaaatgcgatctttgtcgcacgagttgatgtg 15754755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 11995712 - 11995768
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaaga 103  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||    
T  11995712 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 15008265 - 15008313
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagtt 209  Q
    ||||||| |||| ||||||||||||  |||||||||||||| |||||||    
T  15008265 tgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagtt 15008313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 33039 - 32790
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||| || ||||| | || ||||||||||||| | ||||||||||||||| |||||||||    
T  33039 cagagagtcaacatgatttcgtagt---tttggtccttaagttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattct 32943  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||| ||||||||||| ||||||||| |||||| | |||| |||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||    
T  32942 agattgagattgaacttggaatagtctaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccag 32843  T
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||| | ||||| |||||||||||||  ||||||||||||||||||||    
T  32842 ttacagaatgccttgttgggttaaatgcgatctttgtcgcacgagttgatgtg 32790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 51545 - 51619
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| ||||||||||||||||||    
T  51545 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 51619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 23019910 - 23019661
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||||| | |||||||||||||||| | ||| ||||||||||| ||||||| |    
T  23019910 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagatttt 23019814  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||| ||||||||||||||||||| |||||||| |||||| |||||||||||  |||||||||||||||||||||||||| | ||||||||||||  |||     
T  23019813 agattgagattgaacctggaatattttaagaatgaatttttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaa 23019714  T
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||| ||| ||| |||||||||||||||||  |||||| |||||||||||||    
T  23019713 ttacaaaatgcttggttaggttaaatgcgatctttgtcgaacgagttgatgtg 23019661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 27332926 - 27333151
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| | ||||||||| |||||| | | |||| |||||||| ||||||| ||||||||| ||||||||||||   |||    
T  27332926 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27333025  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 234  Q
     |||| ||| || || ||||| ||  |||||||||||||||||||||||||  |||||||||||  | |||| ||||||||| |||||||||||||||||    
T  27333026 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggttaaatg 27333125  T
Q  235 cgatacttgtcgcacgagttgatgtg 260  Q
     ||| |||||||||||||||||||||    
T  27333126 tgatccttgtcgcacgagttgatgtg 27333151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 27393666 - 27393891
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| | ||||||||| |||||| | | |||| |||||||| ||||||| ||||||||| ||||||||||||   |||    
T  27393666 ttttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaagattt 27393765  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 234  Q
     |||| ||| || || ||||| ||  |||||||||||||||||||||||||  |||||||||||  | |||| ||||||||| |||||||||||||||||    
T  27393766 tagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgttaggttaaatg 27393865  T
Q  235 cgatacttgtcgcacgagttgatgtg 260  Q
     ||| |||||||||||||||||||||    
T  27393866 tgatccttgtcgcacgagttgatgtg 27393891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 22080391 - 22080543
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| ||||||||||| |||||| | | |||||||||||||||||||||  ||| | |||||||||||||||||||||||||||||| ||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaactt 22080490  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
     ||||||||| |  |||||||||||||||||||||||||  ||||||||||||    
T  22080491 atgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 255
Target Start/End: Complemental strand, 25644801 - 25644582
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgtaataa---tgattagaaaagattctagaatgagattgaacctggaatagt 132  Q
    ||||| || |||||||| |||||||| |||||||||||||||  | ||||| |||   ||||||| ||||||| |||| |||||||||||||| ||||||    
T  25644801 ttttgacctttaagttgaaccttagatgtttttgagtgcctgttc-atgta-taacgttgattaggaaagattttagattgagattgaacctgaaatagt 25644704  T
Q  133 ttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaa 232  Q
    ||||||| | |||| |||||||||||   ||||||||||| ||||||||||||| |||||||||||||| ||| ||| |||||| |||  |||||||       
T  25644703 ttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtt-tt 25644605  T
Q  233 tgcgatacttgtcgcacgagttg 255  Q
    ||||||  |||||||||||||||    
T  25644604 tgcgatctttgtcgcacgagttg 25644582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 4667874 - 4668080
Alignment:
Q  55 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||| |||||| || ||    
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4667972  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
      |  |  |||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| |||||||||||||    
T  4667973 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcacgag 4668072  T
Q  253 ttgatgtg 260  Q
    ||| ||||    
T  4668073 ttgttgtg 4668080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 19652647 - 19652448
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    || |||| |||||| || || ||  |  |    
T  19652647 gtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaatttttgtgaattgtacct 19652548  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||||||||  |||||||||| | || | ||||||| ||| | ||| ||||| ||||||||||  ||||||||||||||||||||    
T  19652547 gaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttgtttaggataaatgcgatctttgtcgcacgagttgatgtg 19652448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 25956272 - 25956424
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||||| | ||||||  ||||||||||||||||| | | |||| | |||| |||||||||||||| ||||||| |||||||||||||||||||| | |    
T  25956272 ttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaatagtttaagaatgga 25956371  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgc 196  Q
    ||| | |||||||||  || | ||||||||||||||||||||  |||||||||    
T  25956372 ttttttggagttacacctgtattcgccatggcgagtagaggctctcgcctcgc 25956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 4674721 - 4674927
Alignment:
Q  55 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||| |||||| || ||    
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4674819  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
      |  |  | |||||| ||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| |||||||||||||    
T  4674820 actgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcacgag 4674919  T
Q  253 ttgatgtg 260  Q
    ||| ||||    
T  4674920 ttgttgtg 4674927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 4185591 - 4185690
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||||||||||||||||  |||||||||||| |||||| ||| ||||| | ||| ||||||||||||||| |||| ||||||||||| ||||    
T  4185591 tgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttatagaatgccttgctaggttaaatgcgatccttgccgcacgagttgttgtg 4185690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 4189416 - 4189210
Alignment:
Q  55 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||| |||||| || ||    
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 4189318  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
      |  |  | |||||| ||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| |||||||||||||||  ||||||||||||    
T  4189317 actgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatcgttgtcgcacgag 4189218  T
Q  253 ttgatgtg 260  Q
    ||| ||||    
T  4189217 ttgttgtg 4189210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 29808544 - 29808751
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | |||||||||||||||||||| || | ||| |||| |||  | |||||    
T  29808544 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactttggga 29808643  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
     |   |  |||||||||||||||||| ||||||  |||||||||||||      |||||||||| | ||| ||||||| ||||||||  |||||||||||    
T  29808644 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggtt-aatgcgatctttgtcgcacga 29808742  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  29808743 gttgatgtg 29808751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 18457174 - 18457014
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa-tttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| ||  ||||||| ||| ||| ||| |    
T  18457174 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatta-attaagaatgaactttttggaa 18457076  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    | |  |  |||||| ||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  18457075 gct-gacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 18457014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 19668726 - 19668627
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  |||||||||||| |  ||| ||||||||  | ||||||||||||||| ||   ||||||||||||||||||||    
T  19668726 tgaactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatgtg 19668627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 28496134 - 28496208
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||    
T  28496134 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 28496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 31155169 - 31155265
Alignment:
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||| |||||||||| ||||||  |||||||||||| |||||  |||||  || | ||||||||||||||||| | |||||||||||||||| ||||    
T  31155169 actctccatggcgagcagaggctctcgcctcgcgagctacccctttacaacatgccttgttaggttaaatgcggtccttgtcgcacgagttgttgtg 31155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20360632 - 20360707
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20360632 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 20637948 - 20638030
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20637948 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 1561770 - 1561689
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| |||||   ||||||||||||||||||||||    
T  1561770 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 9098087 - 9098192
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaact-atgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| ||||||||| | || ||||| | || |||||||||||||  || |||||||||||||| ||| ||||||| ||| ||||||||||| | |    
T  9098087 gtagttttgacccttaagtcgaactttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattgatattgaacctgggaaa 9098186  T
Q  131 gtttaa 136  Q
    ||||||    
T  9098187 gtttaa 9098192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 19303202 - 19303273
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  19303202 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 19303273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 18821484 - 18821566
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| |||||||||||||||||||    
T  18821484 agttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaat 18821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 22779888 - 22779962
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  22779888 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 16920298 - 16920380
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||||||||| | ||| || |||||| |||||||||    
T  16920298 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattagaaaagaatgtaggataagattgtacctggaat 16920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 17106086 - 17106048
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  17106086 tgaactcgccatggcgagtagaggccctcgactcgcgag 17106048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 18409488 - 18409562
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||| ||| | | || |||||||||| ||||| | ||||||||||||||||||||||    
T  18409488 ccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 18409562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 1561593 - 1561556
Alignment:
Q  223 ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  1561593 ttaggttaaatgcgatctttgtcgcacgagttgatgtg 1561556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 18177438 - 18177471
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctc 194  Q
    |||||||||||||||||||||||||| |||||||    
T  18177438 tgaactcgccatggcgagtagaggccctcgcctc 18177471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 18204433 - 18204400
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctc 194  Q
    |||||||||||||||||||||||||| |||||||    
T  18204433 tgaactcgccatggcgagtagaggccctcgcctc 18204400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 20109698 - 20109605
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    |||||||||  |||||||||| || ||||| | || ||||||||||||| | | |||||||||||||  ||| || |||| |||||||||||||    
T  20109698 gtagttttgatccttaagttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 25629050 - 25629090
Alignment:
Q  88 taatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||| ||| ||| ||||||||||||||||||||||    
T  25629050 taatgattaggaaatattgtagaatgagattgaacctggaa 25629090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 29061000 - 29060926
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| ||||  |||||||||||| || || | ||| ||||||||||||||||||    
T  29061000 ccttagatgcttttgagtgcctgaac-atgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 11011 - 10782
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    |||||||||  |||||||||| | |||||| |||||||||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  11011 gtagttttgatccttaagttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaata 10912  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtta 230  Q
    ||||||||| |||||| || ||||||||  |||||||||||| ||||||||||||  ||||||||||||||||| |||| || ||| | |||||||||||    
T  10911 gtttaagaatgaatttttgtgagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttgttaggtta 10812  T
Q  231 aatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||   |||||||||||||||||||    
T  10811 aatgcgatctctgtcgcacgagttgatgtg 10782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 8519 - 8270
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||| | ||||||| ||| |||||  | |||||||||||||||||||||||||    
T  8519 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattct 8423  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||| |||||||||||||||||||||||||||| | |||| |||||||||||  ||||||||||||||||||| |||||| ||||||||||||||  ||||    
T  8422 agattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagttgtccag 8323  T
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||| ||| |||||||||||  |||| |||  ||||| ||||||||||||||    
T  8322 ttacataatgctttgttaggtataatgtgatctttgtctcacgagttgatgtg 8270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 7271 - 7064
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| |||||| || ||     
T  7271 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtgaa 7172  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgag 252  Q
     |  |  |||||||||||||||||||||||||  |||||| ||||| || | ||||||||||| | ||| |||||||||||||||| |||||||||| ||    
T  7171 ctgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgtcgcacaag 7072  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  7071 ttgatgtg 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 39705930 - 39706155
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | |||||||||||||||||||||    
T  39705930 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaatagttt 39706029  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    |||||||||||| || ||||||||  |||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||| |||||||||||    
T  39706030 aagaacgaattt-tgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtttaggttaaat 39706128  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
    |||||  ||||||||||||||||||||    
T  39706129 gcgatctttgtcgcacgagttgatgtg 39706155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 260
Target Start/End: Complemental strand, 15099833 - 15099603
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | |||||||| ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||||||||||    
T  15099833 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctggaat 15099735  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 228  Q
    |||||||||| |||||| || ||||| ||  |||||||||||||||||||||||||  |||||||||||| || ||||||||||||| ||||  ||||||    
T  15099734 agtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtttaggt 15099635  T
Q  229 taaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||| |||||  |||||||| |||||||||||    
T  15099634 taaaagcgatctttgtcgcatgagttgatgtg 15099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 260
Target Start/End: Complemental strand, 15190787 - 15190570
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||| | |||||||| |||||||||||||||||| | | |||| ||||||||||||| ||||||| ||||||| |||||||||||||||||||| | |    
T  15190787 ttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatgga 15190688  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatactt 242  Q
    ||| |||| ||||||  || ||||||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| |||||||||| |||||  ||    
T  15190687 tttttgggcgttacatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatcttt 15190588  T
Q  243 gtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||    
T  15190587 gtcgcacgagttgatgtg 15190570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 52242811 - 52243016
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  | |||||||||   ||||| | ||| |||||||||||| | | |||||||||| || |||||||||    
T  52242811 cagagagtcaacatgatttcgtagt---tttgatctttaagttggtatttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattct 52242907  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    |||||||||||||||||||||||||||||||| | |||  |||||||||||  |||||||||||| ||||||||||||  |||||||||||||| |||||    
T  52242908 agaatgagattgaacctggaatagtttaagaatgcattgttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccag 52243007  T
Q  208 ttacagaat 216  Q
    |||||||||    
T  52243008 ttacagaat 52243016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 15464567 - 15464752
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| |||||||||||    ||||| | ||||||||||||||| ||||||  ||||||||||| ||||||| |||| |||||||||||||| |||    
T  15464567 gtagttttgacccttaagttgatatttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagattttagattgagattgaacctgaaat 15464665  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||| | |||| |||| ||||||  ||||||| |||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  15464666 agtttaagaatggatttttgggtgttacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 15464752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 43198226 - 43198380
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||||||| | ||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  43198226 gtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaata 43198325  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggc 185  Q
    |||||||||   |||| |||||||||||  ||||||| |||| ||||||||||||    
T  43198326 gtttaagaattgatttttgggagttacacctgaactcaccatagcgagtagaggc 43198380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 56 - 260
Target Start/End: Complemental strand, 8846834 - 8846627
Alignment:
Q  56 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgg-gag 153  Q
    |||||| |||||||||| ||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| |||||| | | |||    
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttttgtgag 8846735  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
    || ||  | |||||||||||||||||||||||  |||||||||||| || | ||||||||||| ||||  ||| ||||||||||||  ||||||||||||    
T  8846734 ttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttatgttaaatgcgatctttgtcgcacgag 8846635  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  8846634 ttgatgtg 8846627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 13845009 - 13844854
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||||| |||||||| ||||||||||| |||||| | | |||| |||||||||||||||||||||   ||||| |||||||||||||||||||| | |    
T  13845009 ttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacctggaatagtttaagaatgga 13844910  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    ||| |||||||||||  || ||| ||||||||||||||||||  ||||||||||||    
T  13844909 tttttgggagttacacctgtacttgccatggcgagtagaggctctcgcctcgcgag 13844854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 44928592 - 44928746
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||| |||  | ||||| |   |       
T  44928592 gtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaatctgacca 44928691  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    ||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  44928692 gaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 44928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 12774458 - 12774252
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaacgaatttgtggga 152  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||||||  |||||||||||||||||||| | |  || |||| |||||| || ||    
T  12774458 ccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgtt-agaatgaattt-tgtga 12774361  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
      |  |  |||||||||||||||||| ||||||  |||||||||||||      |||||||| | | ||| |||||||||||||||| ||||||||||||    
T  12774360 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagactgccttgtttaggttaaatgcgatccttgtcgcacga 12774261  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  12774260 gttgatgtg 12774252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 15868273 - 15868378
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||||| ||||  ||||||||||||| |||| || |||| ||||||||||||||| |     
T  15868273 gtagttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagtttttagattgagattgaacctgggaa 15868371  T
Q  130 agtttaa 136  Q
    |||||||    
T  15868372 agtttaa 15868378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 16597106 - 16597031
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  16597106 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 21815070 - 21815124
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21815070 tgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21815124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 21815399 - 21815453
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21815399 tgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21815453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 21818492 - 21818546
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  21818492 tgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 21818546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13415 - 13516
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |||||    
T  13415 ttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttt 13514  T
Q  135 aa 136  Q
    ||    
T  13515 aa 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 3097093 - 3097017
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    |||||||| ||||| |||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  3097093 accttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 32851929 - 32851839
Alignment:
Q  37 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    |||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||| ||| || |||| |||||||| ||||||    
T  32851929 tttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagattggacctgg 32851839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 12903195 - 12903131
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  12903195 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 14052967 - 14053049
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||| |||||||||||| ||||||    
T  14052967 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaat 14053049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 13617 - 13656
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagt 200  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  13617 tgaactcgccatagcgagtagaggccctcgcctcgcgagt 13656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 16239653 - 16239728
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagat-tctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||  | ||||||||||||||||||||||    
T  16239653 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 44102563 - 44102508
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||| | |||||||||    
T  44102563 tgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 44102508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 6190893 - 6190819
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| | ||| | ||| ||||||||||||||||||    
T  6190893 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 7089313 - 7089251
Alignment:
Q  68 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  7089313 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 14039109 - 14039039
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    ||||||| | |||||||||||||||| | | ||||||||||| | ||||| | ||||||||||||||||||    
T  14039109 ccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacct 14039039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 15552280 - 15552199
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||| | | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||| ||||||||    
T  15552280 agttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 24029208 - 24029127
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| || ||||||||||||||| | | ||||| ||||||  ||||| | ||| ||||||||||||||||||    
T  24029208 agttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaa 24029127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 7089229 - 7089185
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 205  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||    
T  7089229 tgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccc 7089185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 17047841 - 17047885
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 205  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||    
T  17047841 tgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccc 17047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 43198381 - 43198421
Alignment:
Q  220 ttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||||||||||  ||||| ||||||||||||||    
T  43198381 ttgttaggttaaatgcgatctttgtcacacgagttgatgtg 43198421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 53081976 - 53082016
Alignment:
Q  220 ttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||| || | ||||||||||||||||||||    
T  53081976 ttgttaggttaaatgtgacatttgtcgcacgagttgatgtg 53082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 4e-56; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 21329137 - 21329363
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | || | ||||||||||||||||||||| ||||||||||||||||||| |||    
T  21329137 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaataattt 21329236  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    | ||| |||||| |||||||| ||  |||||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||| | ||| |||||||||||    
T  21329237 aggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtttaggttaaat 21329336  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
    |||||  ||||||||||||||||||||    
T  21329337 gcgatctttgtcgcacgagttgatgtg 21329363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 260
Target Start/End: Original strand, 26011652 - 26011901
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||| || ||||| | || |||||| || ||| | ||||||||||||||  |||||||||    
T  26011652 cagagagtcaacatgatttcgtagt---tttgatccttaagttgaactttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattct 26011748  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    | | |||||||||||||||||||||||||||| | |||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||||  | ||    
T  26011749 aaattgagattgaacctggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctag 26011848  T
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||| ||||||||||||||||| |||  ||||| ||||||||||||||    
T  26011849 ttacagaatgctttgttaggttaaatgtgatctttgtcacacgagttgatgtg 26011901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 21741181 - 21741411
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | ||||||||  |||||||||||||||||| ||||  || |||| ||| ||||||| |||| ||||||||||||||||||    
T  21741181 gtagttttgacctttaagtcgaaccttagatatttttgagtgcctgaact-tgtatgatgatgaataggaaagattatagattgagattgaacctggaat 21741279  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 228  Q
    ||||||||||||||||| || ||||| ||  |||||||||||||||||||||||||  |||||||| ||| || ||||||||| ||| ||||  ||||||    
T  21741280 agtttaagaacgaatttatgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtttaggt 21741379  T
Q  229 taaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||| |||||  ||||||||||||||||||||    
T  21741380 taaaagcgatctttgtcgcacgagttgatgtg 21741411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 22144553 - 22144348
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||||||||| | ||||| ||||||||| |||||||||    
T  22144553 cagagagtcaacatgatttcgtagt---tttgatccttaagttggtatttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattct 22144457  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||| ||||||||||||||||||| |||||||| | |||| |||||||||||  |||||||||||| ||||||||||||  |||||||||||||| |||||    
T  22144456 agattgagattgaacctggaataatttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccag 22144357  T
Q  208 ttacagaat 216  Q
    |||||||||    
T  22144356 ttacagaat 22144348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 250
Target Start/End: Original strand, 5888813 - 5889033
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | | |||||| ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||| ||||||    
T  5888813 gtagttttgacctttaagtcgaagcttagatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacatggaat 5888911  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 228  Q
    |||||||||| |||| | || ||||| ||  |||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||    
T  5888912 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggt 5889011  T
Q  229 taaatgcgatacttgtcgcacg 250  Q
    ||||||||||  ||||||||||    
T  5889012 taaatgcgatctttgtcgcacg 5889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 22959194 - 22959401
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaacgaatttgtggga 152  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||| | | |||| ||| |||||| || ||    
T  22959194 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttta-gaatgaatttttgtga 22959292  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
      |  |  |||||||||||||||||||||||||  |||||||||||| || | ||||||||||| | ||| |||||||||||||||| ||||| |||| |    
T  22959293 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaatgcgattcttgttgcacaa 22959392  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  22959393 gttgatgtg 22959401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 21501922 - 21502019
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||| | ||||| |||||||||||||| |||||||||||||||||||    
T  21501922 tgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagtt-cagaatgccttgttgggttaaatgcgatatttgtcgcacgagttgatgt 21502019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 21566004 - 21565797
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| ||||||  | ||     
T  21566004 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaattttcgtgaa 21565905  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
    ||  |  |||||||||||||||||| ||||||  |||||||| ||| || | |||||||||||  |||  ||| || |||||||||  ||||||||||||    
T  21565904 ttgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttgtttatgtaaaatgcgatctttgtcgcacgag 21565805  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  21565804 ttgatgtg 21565797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 21498659 - 21498782
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| ||||| || |||||||||||||||||| | | ||||||| ||||| | ||||| |||| ||||||||||||||||||||||     
T  21498659 ttttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaatagttg 21498758  T
Q  135 aagaacgaatttgtgggagttaca 158  Q
    |||||  ||||| || ||||||||    
T  21498759 aagaataaatttttgagagttaca 21498782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 19669360 - 19669152
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgg-ga 152  Q
    ||||||| ||||||||||| |||||| | | ||||||||||||| |||||||   |||||||||||||| |||||    || |||| |||||| | | ||    
T  19669360 ccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaattttttgtga 19669261  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
     ||  |  |||||||||||||||| ||||||||  ||||||| | || || | ||||||||||| | ||| ||||| |||||| ||| |||||||||| |    
T  19669260 attgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgccttgtttaggataaatgtgattcttgtcgcacaa 19669161  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  19669160 gttgatgtg 19669152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 23390157 - 23390309
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg-aatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||| | || ||||||||    
T  23390157 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 23390256  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 205  Q
     |   |  ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  23390257 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccc 23390309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 11580906 - 11581068
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag-tttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||| |||| ||| ||||  ||  | || ||    
T  11580906 ccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgg-atagattttagaataaaactttgaga 11581004  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
     |   |  |||||||||||||||||| ||||||  ||||||||||||| ||||| |||||||||    
T  11581005 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaat 11581068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 21985808 - 21985882
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  21985808 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 21985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 1096934 - 1096765
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| ||||||   ||  |||| ||| ||    
T  1096934 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaactt 1096835  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
     ||| | |   |  ||||||||||| |||||||||||||  ||||||||||||| ||||||  |||||||    
T  1096834 ttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaat 1096765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 21871342 - 21871433
Alignment:
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttg 255  Q
    ||||||||||||||||||||||   || |||||||| || |||  |||||||| | ||| ||||||||| ||||| ||||||||| ||||||    
T  21871342 actcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtcgcatgagttg 21871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 255
Target Start/End: Original strand, 21875622 - 21875713
Alignment:
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttg 255  Q
    ||||||||||||||||||||||   || |||||||| || |||  |||||||| | ||| ||||||||| ||||| ||||||||| ||||||    
T  21875622 actcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttgctaggttaaacgcgatccttgtcgcatgagttg 21875713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 36154596 - 36154651
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| | |||||||||    
T  36154596 tgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaat 36154651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 21292635 - 21292717
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||| ||||| ||||| | ||| |||||||||||||||||||    
T  21292635 agttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 19660491 - 19660572
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | | |||||||||| |||||||||    
T  19660491 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 21871225 - 21871306
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | || |||||||||| ||||| | ||| ||||||||||||||||||    
T  21871225 agttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21871306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 21875505 - 21875586
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | || |||||||||| ||||| | ||| ||||||||||||||||||    
T  21875505 agttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21875586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 9078402 - 9078338
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||||||||||||||||||||||    
T  9078402 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaa 9078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 36154479 - 36154562
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||||  ||||||| | |||||||||| ||||| | | ||||||||||||| ||||| | |||| ||||||||||||||||    
T  36154479 ttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctgga 36154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 24529681 - 24529607
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||| ||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  24529681 ccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 24529607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 20026501 - 20026606
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| ||||||||| |  | ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||| ||| | |    
T  20026501 gtagttttgacccttaagtcgatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaa 20026600  T
Q  131 gtttaa 136  Q
    ||||||    
T  20026601 gtttaa 20026606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 22119847 - 22119928
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  22119847 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 7695 - 7924
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    |||||||||  |||||||||| |||||||| ||||||||||| |||||| | ||||||||||||||| |||||| ||||| ||||||||||||| |||||    
T  7695 gtagttttgatccttaagttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaata 7794  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtta 230  Q
    ||||||||| |||||| |||| ||||||  |||||||||||| ||||||||||||  |||||||||||||||||  ||| |||||| | ||| |||||||    
T  7795 gtttaagaatgaatttttgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttgctaggtta 7894  T
Q  231 aatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||  |||||||| || ||||||||    
T  7895 aatgcgatctttgtcgcaagaattgatgtg 7924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 36 - 260
Target Start/End: Original strand, 38854893 - 38855118
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| | ||||| |||||||||||||||    
T  38854893 ttttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaatagttt 38854992  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    |||||||||||| || ||||||||  |||||||||||||||||||||||||| ||||||||||| || |||||||||||||| | ||| ||||||||||     
T  38854993 aagaacgaattt-tgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgcttaggttaaac 38855091  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
     ||||  ||||||||||||||||||||    
T  38855092 acgatctttgtcgcacgagttgatgtg 38855118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 238
Target Start/End: Complemental strand, 39834315 - 39834107
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | |||||||| |||||||||||||| |||| ||||  ||||||||||| ||||||| |||| ||||||||||||||||||    
T  39834315 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaact-tgtatgataatgattaggaaagattgtagattgagattgaacctggaat 39834217  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 228  Q
    |||||||||| |||| | || ||||| ||  |||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||| ||    
T  39834216 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaataccttgtttaagt 39834117  T
Q  229 taaatgcgat 238  Q
    ||||||||||    
T  39834116 taaatgcgat 39834107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 21285989 - 21285852
Alignment:
Q  123 ctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg 222  Q
    ||||||||||||||||| |||||| |||||||||||  ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||| |||||    
T  21285989 ctggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg 21285890  T
Q  223 ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||  || |||||||||||||||||    
T  21285889 ttaggttaaatgcgatctttatcgcacgagttgatgtg 21285852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 23760509 - 23760707
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||| ||||||| | | ||||||||||||| ||| |||  | | |||||||||||||||||||||||||||||||| |||||||||||| |  |    
T  23760509 gtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaatagtttaagaacgaacttgtgggagttatacct 23760608  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||| |||| |||||||||||||| ||||||||||| ||  | ||||||| ||| | |||||||| ||||||||||  ||||||||| ||||||||||    
T  23760609 gaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttgttaggataaatgcgatctttgtcgcacaagttgatgtg 23760707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 6520847 - 6520622
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| ||||||||||| |||||| | | ||||||| ||||| |||||||  ||| | ||| |||||||| ||||||||    
T  6520847 ttttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaatagttt 6520748  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatg 234  Q
    ||||| | |||| || |||||| |  |||| ||||||||||||||||||||| ||||||||| |  | |||| ||||||||| |||||||||||||||||    
T  6520747 aagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttgttaggttaaatg 6520648  T
Q  235 cgatacttgtcgcacgagttgatgtg 260  Q
    ||||  |||| ||| |||||||||||    
T  6520647 cgatctttgttgcatgagttgatgtg 6520622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 19801101 - 19801234
Alignment:
Q  68 tgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaact 166  Q
    ||||||||||||| | | ||||||||||||| ||||| |  ||||| |||||||||||||||||||||||||||||| |||||||||||| |  ||||||    
T  19801101 tgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaatagtttaagaacgaacttgtgggagttatacctgaact 19801200  T
Q  167 cgccatggcgagtagaggccatcgcctcgcgagt 200  Q
    |||||||||||||||||| | |||||||||||||    
T  19801201 cgccatggcgagtagaggtcctcgcctcgcgagt 19801234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 21674157 - 21673958
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| |||| | || ||||| ||  |    
T  21674157 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatatttgtgagttgcacct 21674058  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||||||||| ||||||||||| ||  |  |||||||||| | ||| ||||| ||||||||||  ||||||||| |||| |||||    
T  21674057 gaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttaatgtg 21673958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 26355367 - 26355566
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| | | ||||||||||||| | |||||  ||| |||||||||||||||||    || |||| |||||| || || ||  |  |    
T  26355367 gtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaatttttgtgaattgtacct 26355466  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||| ||||||||||||||||||  ||||||| |||| || | ||||||||||| | ||| ||| ||||||||||||  ||||||||| ||||||||||    
T  26355467 gaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttgtttatgttaaatgcgatctttgtcgcacaagttgatgtg 26355566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 41598644 - 41598482
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| | |||||||||||||||| | | ||||||||||||  ||||| | ||||||||||||||||||||||   ||| |||| |||  | |||||     
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 41598545  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |   |  |||||||||||||||||| ||||||  ||||||||||||| ||| |||||||||||    
T  41598544 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaat 41598482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 21491462 - 21491382
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    |||||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||    
T  21491462 ttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 5865931 - 5866009
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  5865931 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 5866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 17141380 - 17141302
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  17141380 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 13507657 - 13507752
Alignment:
Q  42 cccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||| ||| || |||| ||||| ||||||||| | |||||||    
T  13507657 cccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13507752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 13597189 - 13597284
Alignment:
Q  42 cccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||| ||| || |||| ||||| ||||||||| | |||||||    
T  13597189 cccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13597284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 229
Target Start/End: Complemental strand, 23406841 - 23406665
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaat-ttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||| ||||||||   ||  |||| |||  ||||||||    
T  23406841 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggga 23406742  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 229  Q
     |   |  ||||||||||| |||||||||||||  ||||||||||||| ||||||  ||||| | | ||||||||||    
T  23406741 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggtt 23406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 45130691 - 45130767
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  45130691 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 45130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 18878898 - 18878972
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  18878898 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 20499143 - 20499049
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||||| ||||| ||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||    
T  20499143 gtagttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 20536675 - 20536594
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | | ||||||||||| ||||| | ||| ||||||||||||||||||    
T  20536675 agttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaa 20536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 21286724 - 21286656
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac 80  Q
    ||||||||| ||||| |||||||||   |||| ||||||||||| |||||||| |||||| |||||||||||    
T  21286724 cagagagtcaacatgatttcgtagt---tttgacccttaagttgaaccttagatgtttttaagtgcctgaac 21286656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 21918664 - 21918745
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | ||| |||||||||||| | | ||||||||||||||||||| | ||| | ||||||||||||||||    
T  21918664 agttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaa 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 6759717 - 6759643
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||| ||||| | | ||||||||||||| ||||| | |||||||||||||||| |||||    
T  6759717 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 6759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 7373209 - 7373135
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||| |||||||||||||    
T  7373209 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaa 7373135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 18818071 - 18818145
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  18818071 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 18818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 20536560 - 20536514
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  20536560 tgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 20536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 22627195 - 22627125
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  22627195 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 31971711 - 31971629
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||| |||||||||| | | ||||||||||||| ||||  | ||| |||||||||||||||||||    
T  31971711 agttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 21255686 - 21255605
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||  ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  21255686 agttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 17266565 - 17266647
Alignment:
Q  43 ccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacct 124  Q
    |||||||| | || ||||| ||||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||||||||    
T  17266565 ccttaagtcgaactttagatgtttttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 21414997 - 21415049
Alignment:
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    ||||||||||||||||||||| |  ||||||||||||||  ||| ||||||||    
T  21414997 aactcgccatggcgagtagagcctctcgcctcgcgagttgtccaattacagaa 21415049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 25362843 - 25362887
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  25362843 taataatgattaggaaagaatgtaggatgagattgaacctggaat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 260
Target Start/End: Complemental strand, 13407 - 13194
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||||||||||| | | |||| |||||||| |||||||  ||| | |||||||||||||||||||||||||| ||||||    
T  13407 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaatagtttaagaatgaattt 13308  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcg 246  Q
     || ||||| ||  |||||||||||||||||||||||||| |||||||||||| || ||||||||||||| | ||||||||||||||| |||  |||||     
T  13307 ttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgttaggttaaatgtgatctttgtca 13208  T
Q  247 cacgagttgatgtg 260  Q
    ||||||||||||||    
T  13207 cacgagttgatgtg 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 45 - 260
Target Start/End: Original strand, 15481 - 15698
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| |||||||||||||||||||||||||||| | |    
T  15481 ttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaatagtttaagaatgga 15580  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatactt 242  Q
    ||| | ||| ||||| ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| | ||| ||| |||||||| |||  ||    
T  15581 tttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtttatgttaaatgtgatcttt 15680  T
Q  243 gtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||    
T  15681 gtcgcacgagttgatgtg 15698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 7092 - 6866
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| | |||||||||||||||||||||    
T  7092 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 6993  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    ||||| | |||| ||||| |||||  |||||||||||||||||||||||||| ||||||||| || || ||||||| ||||| | ||| |||||||||||    
T  6992 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 6893  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
    |||||  ||||||||||||||||||||    
T  6892 gcgatctttgtcgcacgagttgatgtg 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 36 - 260
Target Start/End: Complemental strand, 14472 - 14246
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| |||||||| |||||||||||||| ||| | | |||| |||||||| ||||||| |||| | |||||||||||||||||||||    
T  14472 ttttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaatagttt 14373  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    ||||| | |||| ||||| |||||  |||||||||||||||||||||||||| ||||||||| || || ||||||| ||||| | ||| |||||||||||    
T  14372 aagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtttaggttaaat 14273  T
Q  234 gcgatacttgtcgcacgagttgatgtg 260  Q
    |||||  ||||||||||||||||||||    
T  14272 gcgatctttgtcgcacgagttgatgtg 14246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 259
Target Start/End: Complemental strand, 15471391 - 15471179
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||| ||||||| | | |||| |||||||| |||||||  ||| | |||||||||||||||||||||||||||||||||    
T  15471391 agttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaattt 15471292  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtc 245  Q
     || ||||||||  |||||||||||||||||||||||||| |||||||| ||  | |||||||||||||| ||||| ||||||||||||||||  |||||    
T  15471291 -tgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgtttaggttaaatgcgatctttgtc 15471193  T
Q  246 gcacgagttgatgt 259  Q
    ||||||||||||||    
T  15471192 gcacgagttgatgt 15471179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 1465047 - 1465277
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | |||||||| ||||||||||||||||||| ||||  || |||||||  ||||||| |||| ||||||||||||||||||    
T  1465047 gtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaact-tgtatgatgatgattatgaaagattgtagattgagattgaacctggaat 1465145  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 228  Q
    | |||||||||||||||||| ||||| ||  |||||| ||||||||||||||||||  |||||||||||| || ||||||||||||| | ||| ||||||    
T  1465146 aatttaagaacgaatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggt 1465245  T
Q  229 taaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||| |  ||  ||||||||||||||||||||    
T  1465246 taaaagtaatctttgtcgcacgagttgatgtg 1465277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 44 - 260
Target Start/End: Complemental strand, 324706 - 324489
Alignment:
Q  44 cttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg 141  Q
    ||||||||| || ||||| | ||||||||||||||| ||||||  ||||||||||| ||||||| ||||||||||||||||   |||||||||||||| |    
T  324706 cttaagttgaactttagatgattttgagtgcctgaa-tatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatg 324608  T
Q  142 aatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatact 241  Q
    ||||| |||||||| ||  |||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||  | ||||||||||||||| ||   |    
T  324607 aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttgttaggttaaatgtgacctt 324508  T
Q  242 tgtcgcacgagttgatgtg 260  Q
    ||||| || ||||||||||    
T  324507 tgtcgtacaagttgatgtg 324489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 2050839 - 2051018
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||| ||| | ||||||||||||||| |||||||||||| ||||||||||||  |||||    
T  2050839 gtagttttgacccttaagttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaata 2050936  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 212  Q
    ||||||||| | |||| |||||||||||  ||||||| |||| ||||||||||||  |||||||| ||||| ||||||||||    
T  2050937 gtttaagaatggatttttgggagttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 2051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 259
Target Start/End: Complemental strand, 14234969 - 14234745
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| || |||||||| ||||||||  ||||||||||||||||| | | |||| |||||||| ||||||| |||| |||||||||||| | |||||||     
T  14234969 ttttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaatagtt- 14234871  T
Q  135 aagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaat 233  Q
    ||||| |||||| |||||||| ||  |||||||||||||||||||||||||| ||||||||| || || ||||||||||||| | ||| |||||||||||    
T  14234870 aagaatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgtttaggttaaat 14234771  T
Q  234 gcgatacttgtcgcacgagttgatgt 259  Q
    | |||  |||||| || |||||||||    
T  14234770 gtgatctttgtcgaacaagttgatgt 14234745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 52523345 - 52523550
Alignment:
Q  9 cagagagtcgacatggtttcgtagtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattct 107  Q
    ||||||||| ||||| |||||||||   ||||  |||||||||||   ||||| | |||||||||||||||| | ||||||||| ||||| |||||||||    
T  52523345 cagagagtcaacatgatttcgtagt---tttggtccttaagttggtatttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattct 52523441  T
Q  108 agaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    ||  ||| ||||||||||||| |||||||||| | |||| |||||||||||  |||||||||||| ||||||||||||| ||||||  |||||| |||||    
T  52523442 agtttgatattgaacctggaacagtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccag 52523541  T
Q  208 ttacagaat 216  Q
    |||||||||    
T  52523542 ttacagaat 52523550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 216
Target Start/End: Original strand, 17247947 - 17248109
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||| |||  | |||||     
T  17247947 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 17248046  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |   |  |||||||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  17248047 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 17248109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 12933971 - 12934178
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| ||| || || ||     
T  12933971 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaattttgtgaa 12934070  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgag 252  Q
     |  |  |||||||||||||||||| |||| |  |||||||||||||      |||||||| ||| ||| ||||||||||||||||  ||||||||||||    
T  12934071 ctgaacctgaactcgccatggcgagcagagactctcgcctcgcgagtacttgtgttacagacttccttgtttaggttaaatgcgatctttgtcgcacgag 12934170  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  12934171 ttgatgtg 12934178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 16097782 - 16097583
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    ||||||||||| |||||| | | ||||||| ||||| |||||||  |||||||||||||||||| ||   ||| |||| |||||| || || ||  |  |    
T  16097782 gtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaagattttagaatgaatttttgtgaattggacct 16097683  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||| ||||||||||  |||||||||||| || | ||||||| ||| ||||  ||| ||||||||||||  ||||||||||||||||||||    
T  16097682 gaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttgtttatgttaaatgcgatctttgtcgcacgagttgatgtg 16097583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 32308128 - 32307922
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| ||| ||||||||||||| |||||||  ||||||||||||||||| |||| | ||| |||| |||||| |||||    
T  32308128 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacctaggaagacttt-agaatgaattt-tggga 32308031  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
      |  |  |||||||||||||||||| ||||||  |||||||||||||      |||||| ||| | ||| ||||||||||||||||  |||||||||||    
T  32308030 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacataatgccttgtttaggttaaatgcgatctttgtcgcacga 32307931  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  32307930 gttgatgtg 32307922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 37250934 - 37251033
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  |||||||||||||| |||||||||||||  | ||||||||||||| | ||   ||||||||||||||||||||    
T  37250934 tgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttgttaggttaaaagtgacctttgtcgcacgagttgatgtg 37251033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 215
Target Start/End: Complemental strand, 42386894 - 42386710
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||||| |||||||  |||| ||||||| ||||| |||  |||||||||||||  |||| | |||| || ||||||||||| |||    
T  42386894 gtagttttgacctttaagttgaaccttagttgtttatgagtgcatgaac-atgcataataatgattaggcaagactttagactgtgattgaacctgaaat 42386796  T
Q  130 agtttaagaacgaat-ttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    |||| ||||| |||  || ||||||||| |  |||||||||||||||||||||||||  || ||||||||||| |||| ||||||||    
T  42386795 agtt-aagaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa 42386710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 53070360 - 53070520
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa-tttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||| || || ||||| ||| ||| ||| |    
T  53070360 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaa 53070458  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    | |  |  |||||||||||||||||||||||||  |||||||||||||| |||| ||||||||    
T  53070459 gctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 53070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 12171872 - 12171972
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgtt-aggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||| ||||||||||||||||||  |||||||||||  || | ||||||||||| | ||||| |||||||||||||| |||||||||| |||||||||    
T  12171872 tgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtttaggttaaatgcgattcttgtcgcacaagttgatgt 12171971  T
Q  260 g 260  Q
    |    
T  12171972 g 12171972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 49389305 - 49389378
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||||    
T  49389305 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 49389378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 605941 - 606034
Alignment:
Q  44 cttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    ||||||||| |||||||| | |||||||||||||||  | | |||||||||||||  ||  ||||||| ||||||||||||||||| |||||||    
T  605941 cttaagttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaa 606034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 14179789 - 14179708
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||| |||||    
T  14179789 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 260
Target Start/End: Original strand, 49667754 - 49667951
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatga 163  Q
    ||||||| |||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||   ||| |||| ||| |  || ||  |  |  |||    
T  49667754 ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaatattgtgaactgaacctga 49667853  T
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||| ||||||  |||||||||||||      |||||||| | | ||| ||||||||||| ||||  ||||||||||||||||||||    
T  49667854 actcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagactgccttgtttaggttaaatacgatctttgtcgcacgagttgatgtg 49667951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 1644352 - 1644550
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg-gaatagtttaagaacgaatttgtgggagttacaaa 160  Q
    |||||||||||||||||| | | | ||||||||||| |||||||  |||||||||||||||||| ||| | ||| |||| |||||| || ||  |  |      
T  1644352 gtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagacttt-agaatgaattt-tgtgaactgaacc 1644449  T
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||||||||||| ||||||  |||||||||||||      |||||| | | | ||| ||| |||||||||||| ||||||||||||||||||||    
T  1644450 tgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacaaactgccttgtttaagttaaatgcgatccttgtcgcacgagttgatgt 1644549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 9513370 - 9513299
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||    
T  9513370 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctg 9513299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 9521345 - 9521274
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||    
T  9521345 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctg 9521274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 13210096 - 13210195
Alignment:
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||||||||  ||||||||||||       |||||||||| | ||| |||||||||||| |||  ||||||||||||||||||||    
T  13210096 gaactcgccatggcgagtagaggctctcgcctcgcgagcacttgtgttacagaatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtg 13210195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 14573037 - 14572974
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  14573037 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 14572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 40213392 - 40213535
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatga 163  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||| ||| || ||||| |   |  |||    
T  40213392 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatctaacctga 40213491  T
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    |||||||| |||||| ||||||  ||||||||||||| ||||||    
T  40213492 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag 40213535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 11424424 - 11424498
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||| | | ||||||||||||||||||||||    
T  11424424 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaa 11424498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 18438994 - 18438920
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | || |||||||||||||||||||    
T  18438994 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaa 18438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 20698101 - 20698183
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20698101 agttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 49389459 - 49389497
Alignment:
Q  223 ttaggttaaatgcgatacttgtcgcacgagttgatgtgt 261  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  49389459 ttaggttaaatgcgatccttgtcgcacgagttgatgtgt 49389497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 14501677 - 14501587
Alignment:
Q  37 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    |||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| ||||||    
T  14501677 tttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaaggttttagattgagattggacctgg 14501587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 14572941 - 14572873
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 229  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| ||  ||||| | | ||||||||||    
T  14572941 tgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtt 14572873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 16104240 - 16104168
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||| |||| ||||||||||||| | | ||||||||||||| |||||||  |||||||| ||||||||||    
T  16104240 ccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgg 16104168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 23275213 - 23275119
Alignment:
Q  43 ccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| ||||||||||| ||| | |||||||    
T  23275213 ccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaa 23275119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 23412814 - 23412916
Alignment:
Q  35 gttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaatagt 132  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||| ||||  ||| |||||||||  ||| || |||| |||||||| |||||| | |||    
T  23412814 gttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagt 23412912  T
Q  133 ttaa 136  Q
    ||||    
T  23412913 ttaa 23412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 14576505 - 14576568
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||||||||||| | | |||| |||||||||||||| | |||||||| |||||||||||||    
T  14576505 tttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaa 14576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 17488306 - 17488243
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  17488306 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 17499788 - 17499725
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  17499788 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 606135 - 606173
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  606135 tgaactcgccatggcgagtagaggtcctcgcctcgcgag 606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 25476046 - 25476120
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| |||||||||| ||||||| | | ||||||||||||  ||||| | ||||||||||| ||||||||||    
T  25476046 ccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaa 25476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 26687347 - 26687273
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||| ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  26687347 ccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 26687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 43927652 - 43927558
Alignment:
Q  43 ccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||||||| | || ||||| | |||||||||||||||| | | |||||||||||||| ||| || |||| |||| |||||||||| | |||||||    
T  43927652 ccttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaa 43927558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 12340219 - 12340138
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  12340219 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 14973314 - 14973245
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacc 123  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||| ||||    
T  14973314 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacc 14973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 22109926 - 22110007
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    |||||||| || ||||| |||||||||||||||||| | | |||||||||||||  ||| || |||  ||||||||||||||    
T  22109926 ttaagttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 13442724 - 13442660
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  13442724 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 13442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 23083132 - 23083176
Alignment:
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||    
T  23083132 aactcgccatggcgagtagaggctctcgcctcgcgaatgacccag 23083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 45797721 - 45797631
Alignment:
Q  37 tttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    |||| ||||||||||| || ||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| ||||||    
T  45797721 tttgtcccttaagttgaactttagatgattttgagtgcctgaa-tatgtataataatgattaggtaagtttttagattgagattggacctgg 45797631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 48 - 260
Target Start/End: Original strand, 22921521 - 22921735
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||| ||||||||||||||||||||||    
T  22921521 agttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaatagtttaagaacgaattt 22921620  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtc 245  Q
     || |||||| |  |||||||||||||||||||||||||  |||||||||||  | || ||||||||||| | ||| || |||||||||||||  |||||    
T  22921621 ttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtttgggttaaatgcgatctttgtc 22921720  T
Q  246 gcacgagttgatgtg 260  Q
    |||||||||||||||    
T  22921721 gcacgagttgatgtg 22921735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 35981325 - 35981554
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||| ||||  || |||||||| ||||||| |||| ||||||||||||||| ||    
T  35981325 gtagttttgacctttaagtcgaacctt-gatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctgggat 35981422  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggt 228  Q
    ||||||||||||||||| || ||||| ||  |||||||||||||| ||||||||||  |||||||||||| || | ||||||||||| | ||| ||||||    
T  35981423 agtttaagaacgaatttatgtgagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggt 35981522  T
Q  229 taaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||| |||||  ||||||||||| ||||||||    
T  35981523 taaaagcgatctttgtcgcacgaattgatgtg 35981554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 52927642 - 52927848
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||  |||||||  |||||||||||||||||||||   |||  ||| |||||| |   ||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaagattttggaatgaattttttaaag 52927741  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagt 253  Q
    ||| |  |||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||| | |||||||||||||||||||  |||||||||||||    
T  52927742 ttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttaggttaaatgcgatctttgtcgcacgagt 52927841  T
Q  254 tgatgtg 260  Q
    |||||||    
T  52927842 tgatgtg 52927848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 260
Target Start/End: Complemental strand, 20637279 - 20637103
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagagg 184  Q
    |||| |||||||| |||||||  ||| | ||||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||||||||||||||||    
T  20637279 taatgatgattaggaaagattggagattaagattgaacctggaatagtttaagaacgaatttttgtgagttgcacctgaactcgccatggcgagtagagg 20637180  T
Q  185 ccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |  |||||||||||| ||  |||||||||||| ||||  |||||||||| |||||  |||||||| |||||||||||    
T  20637179 ctctcgcctcgcgagctaatcagttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtg 20637103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 250
Target Start/End: Original strand, 28194086 - 28194306
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||| ||||  || |||||||| ||||||| |||| |||||||||||||| |||    
T  28194086 gtagttttgacctttaagtcgaaccttggatgtttttgagtgcctgaact-tgtatgatgatgattaggaaagattgtagattgagattgaacctgaaat 28194184  T
Q  130 agtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggt 228  Q
    |||||||||| |||| | || ||||| ||  ||||||||||||||| |||||||||  |||||||||||| |||||| ||||| ||| ||||  ||||||    
T  28194185 agtttaagaatgaatctttgtgagttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttacaaaatgtcttgtttaggt 28194284  T
Q  229 taaatgcgatacttgtcgcacg 250  Q
    || |||||||  ||||||||||    
T  28194285 tacatgcgatctttgtcgcacg 28194306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 33681469 - 33681262
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| |||||||||| |||||| |||||  |||||||||||| |||||||  |||||||||||||||||||||   ||| |||| |||||| || ||    
T  33681469 ccttagatgtttttgagttcctgaa-tatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtga 33681371  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
    ||| ||  |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||| | | ||| ||| ||||||||||||  ||||| |||||    
T  33681370 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttgcttatgttaaatgcgatctttgtcacacga 33681271  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  33681270 gttgatgtg 33681262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 22238089 - 22237883
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    |||||||  ||||||||||||||||| | | |||||||| |||| |||||||  ||||||||||| |||||||||   |||  ||| |||||| || |||    
T  22238089 ccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagattttggaatgaattt-tgtgag 22237991  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgag 252  Q
    || ||  |||||||||||||||||||||||||| ||||||||||| ||  | ||||||||||| | ||| ||||||||||||||||  || |||||||||    
T  22237990 ttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgtttaggttaaatgcgatctttttcgcacgag 22237891  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  22237890 ttgatgtg 22237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 259
Target Start/End: Complemental strand, 20248734 - 20248531
Alignment:
Q  58 tagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaacgaatttgtgggagtt 155  Q
    |||| |||||||||||||||||| | | ||||||||||||| ||||||   |||||||||||||||||||| | | |||| ||| |||||| || ||  |    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagacttta-gaatgaatttttgtgaact 20248636  T
Q  156 acaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgagtt 254  Q
      |  ||||||||||||||||||||||||| ||||||||||||| || | |||||||||||  |||  |||||||||||||||| |||||||||| ||||    
T  20248635 gaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatttaggttaaatgcgattcttgtcgcacaagtt 20248536  T
Q  255 gatgt 259  Q
    |||||    
T  20248535 gatgt 20248531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 43697830 - 43697716
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||||| |||||||| |||||||||||||||||| | | || | ||||||||||||||||||||| ||||||| |||||||||||||||||||| | |    
T  43697830 ttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaatagtttaagaatgga 43697731  T
Q  144 tttgtgggagttaca 158  Q
    |||  ||||||||||    
T  43697730 ttttcgggagttaca 43697716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 49261690 - 49261594
Alignment:
Q  165 ctcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||| |||||||  |||||||||||| || ||||||||||||| | ||| |||||||||| |||||  ||||||||||||||||||||    
T  49261690 ctcgccatggcgaatagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtg 49261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 21754495 - 21754290
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||| |||||||||||| |||| | ||| |||| |||||| || ||    
T  21754495 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagacttt-agaatgaattt-tgtga 21754398  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
      |  |  |||||||||||||||||| ||||||  |||||||||||||       ||||||| | | ||||||||||||||| ||| |||||||||||||    
T  21754397 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgttttacagactgccttgttaggttaaatgtgatccttgtcgcacgag 21754298  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  21754297 ttgatgtg 21754290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 433467 - 433312
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| | ||||||||| |||||| | | || |||||||||| ||||| | ||||||||||||||||||||||   ||| |||| |||  | |||||     
T  433467 ccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgggaa 433368  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagtt 209  Q
    |   |  |||||||||||||||||| ||||||  ||||||||||||| ||||||||    
T  433367 tctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtt 433312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 26065293 - 26065238
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  26065293 tgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaat 26065238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 22355839 - 22355921
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  22355839 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 22357525 - 22357607
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  22357525 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 21895870 - 21895975
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| |||||||||||  | ||||| | || ||||||||||||| | | ||||||||||||| |||| || |||| ||||||||||||||| | |    
T  21895870 gtagttttgacccttaagttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgggaaa 21895969  T
Q  131 gtttaa 136  Q
    ||||||    
T  21895970 gtttaa 21895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 21861336 - 21861435
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||| |||||||||| ||      |  ||||||| | ||||||||||||||| || | ||||||||||||||||||||    
T  21861336 tgaactcgccatagcgagtagaggccctcgcctcgcgtgtccttgtgagacagaatgccttgttaggttaaatgtgacatttgtcgcacgagttgatgtg 21861435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 50209885 - 50209948
Alignment:
Q  66 tttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  50209885 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 50209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 16759209 - 16759115
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||||| ||||||||| | |||||||| |||||||||||||| |||   | |||||||||||||  ||| || |||| ||||||||||||||    
T  16759209 gtagttttgacccttaagtcgaaccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctg 16759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 22532729 - 22532655
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  22532729 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 27250394 - 27250476
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||| |||||||||||||||    
T  27250394 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 35260852 - 35260898
Alignment:
Q  166 tcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 212  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  35260852 tcgccatagcgagtagaggccctcgcctcgcgagtttcccagttaca 35260898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 20919051 - 20918990
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  20919051 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21342631 - 21342536
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||| |||||||| | ||||||||| ||||| ||||  |||||||||||||  ||| || |||| ||||| |||||||||    
T  21342631 gtagttttgacccttaagttgaaccttagatgattttgagtgtctgaa-tatgtataataatgattaggcaagtttttagattgagaatgaacctgg 21342536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 21347496 - 21347401
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||||| ||||||||||| |||||||| | ||||||||| ||||| ||||  |||||||||||||  ||| || |||| ||||| |||||||||    
T  21347496 gtagttttgacccttaagttgaaccttagatgattttgagtgtctgaa-tatgtataataatgattaggcaagtttttagattgagaatgaacctgg 21347401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 21861132 - 21861237
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| |||||||||||  | ||||| | || ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |    
T  21861132 gtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaa 21861231  T
Q  131 gtttaa 136  Q
    ||||||    
T  21861232 gtttaa 21861237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 34510239 - 34510166
Alignment:
Q  56 cttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 34510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 16759004 - 16758949
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||| || |||||||||| || ||||||||||| || |||||||||||    
T  16759004 tgaactcgccatagcaagtagaggccctcacctcgcgagttgcctagttacagaat 16758949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20846891 - 20846966
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||| | |||||||||||||||| | | |||||||||||||  |||| | ||| |||||||||||||||||||    
T  20846891 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 38801056 - 38801138
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| || ||||| || ||||||||||||||| | | ||||||||||||| ||||| | ||| ||| |||||||||||||||    
T  38801056 agttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 55 - 250
Target Start/End: Complemental strand, 3392 - 3195
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||| |||||||||    
T  3392 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaatagtttaagaacgaacttgtgggag 3293  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacg 250  Q
    ||| |  |||||||||||||||||||||||||| |||||||| || ||  | ||||||||||| | ||| ||||||||||||||||  ||||||||||    
T  3292 ttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgtttaggttaaatgcgatctttgtcgcacg 3195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 130359 - 130160
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| | | || | ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||| |||||  |    
T  130359 gtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggaattacacct 130260  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
     |||||||||||||||| ||||||  |||||||||||| || | ||||||| ||| | ||| ||||| ||||||||||  ||||||||||||||||||||    
T  130259 aaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcacgagttgatgtg 130160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 60481 - 60536
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  60481 tgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaat 60536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 43438 - 43590
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||    
T  43438 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 43537  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
     |||||||||||  || |||||||||| |||||||||||  ||||||||||||    
T  43538 ttgggagttacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 47358 - 47510
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||||||||||| | | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||    
T  47358 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 47457  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
     |||||||||||  || ||| |||||| |||||||||||  ||||||||||||    
T  47458 ttgggagttacacctgtactagccatgacgagtagaggctctcgcctcgcgag 47510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 2313 - 2511
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaat 161  Q
    |||||||||||||||||| | | ||||||||||||| |||||||  ||| |||||||||||||||| ||||| ||||||| | |||||||||||| |  |    
T  2313 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggattagtt-aagaacgtacttgtgggagttatacct 2411  T
Q  162 gaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| | ||| ||||| ||||||||||  ||||||||| ||||||||||    
T  2412 gaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtg 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 23708257 - 23708441
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    ||||||||| ||||| |||||  | ||||| ||||||||||| |||||| |||||| |||||||||| |||| |  |||| |||||||||| | ||||||    
T  23708257 gtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatc-ggaata 23708355  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    ||||||||| | |||| |||||||||||  |||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||    
T  23708356 gtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaat 23708441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 25176309 - 25176140
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaattt 146  Q
    ||||| |||||||| |||||||||||||||||| | | |||| |||||||| |||| ||  ||| |||||||||||||||||||||||||||||  ||||    
T  25176309 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaatagtttaagaacagattt 25176210  T
Q  147 gtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
     || |||||| |  |||||||||||||||||||||||||| |||||||||||  | | ||||||||||||    
T  25176209 ttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaat 25176140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 23207632 - 23207533
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  |||||| ||||||| |||||||||||||  | ||||||||||||||| ||   ||||||||||||||||||||    
T  23207632 tgaactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatgtg 23207533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 298476 - 298629
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg-aatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||| || || |||| | || ||||||||    
T  298476 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaa-agatttagaatgaaacttgtggga 298574  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
     |   |  ||||||||||| |||||||||||||  ||||||||||||| ||||||    
T  298575 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 28406429 - 28406232
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatga 163  Q
    |||||||||||||||| | | ||||||| ||||| |||||||  |||||||||||||||||| ||   ||| ||||  || || || ||  |  |  |||    
T  28406429 ttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactgaacctga 28406330  T
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgtt-aggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||||||||  ||||||||| |||      |||||| ||| | ||||| |||||||||||||| |||||||||||||||||||||    
T  28406329 actcgccatggcgagtagaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtg 28406232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 22133878 - 22134083
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||| |||| | ||| |||| |||||| || ||    
T  22133878 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctaggaagacttt-agaatgaattt-tgtga 22133975  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
      |  || |||||||||||||||||| ||||||  ||||||||||| |      |||||||| | | ||| ||||||||||||||||  |||||||||||    
T  22133976 act-gaactgaactcgccatggcgagcagaggctctcgcctcgcgaatacttgtgttacagactgccttgtttaggttaaatgcgatctttgtcgcacga 22134074  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  22134075 gttgatgtg 22134083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 23071617 - 23071695
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  23071617 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 23660482 - 23660408
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  23660482 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 23660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 23076910 - 23076726
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    ||||||||  ||||||| | |||||||||||||||| | | ||||||| ||||| ||||| | ||| ||||||||| |||||||| || || |||| |||    
T  23076910 ttaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaa-agatttagaatgaa 23076812  T
Q  144 tttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 229  Q
      | ||| | |   |  ||||||||||| |||||||||||||  ||||||||||||||||||||  ||||| | | ||||||||||    
T  23076811 actttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttaggtt 23076726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 22737841 - 22738017
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg-aatttgtggga 152  Q
    ||||||| | |||||||||||||||| ||| ||||||||||||| ||||| | ||| |||||||||||||| |||   ||  |||| | || ||||||||    
T  22737841 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtggga 22737940  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggtt 229  Q
     |   || ||||||||||| |||||| ||||||  ||||||||||||| ||| ||  ||||| | | ||||||||||    
T  22737941 ttctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggtt 22738017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 22730894 - 22730968
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  22730894 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 23654064 - 23654146
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||| ||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  23654064 agttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 22412902 - 22412953
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttaca 212  Q
    |||||||||||| ||||||||||||  |||||||| ||||| ||||||||||    
T  22412902 tgaactcgccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 22412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 23286317 - 23286235
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||| ||||||    
T  23286317 agttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaat 23286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 27754035 - 27753961
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||| ||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  27754035 ccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 27753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 37787 - 37863
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgatta-gaaaagattctagaatgagattgaacctggaat 129  Q
    |||||||| | |||||||||||||||| | | |||||||||||| ||||||| | ||| |||||||||||||||||||    
T  37787 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaga-tgtaggatgagattgaacctggaat 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 18786446 - 18786494
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac 80  Q
    ||||||||| ||||||||||| || ||||| | ||||||||||||||||    
T  18786446 gtagttttgacccttaagttgaactttagatgattttgagtgcctgaac 18786494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 20309523 - 20309479
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  20309523 taataatgattaggaaagaatgtaggatgagattgaacctggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 31756268 - 31756232
Alignment:
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||||||||||||||  ||||||||||||    
T  31756268 aactcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 590 - 383
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    |||||||  ||||||||||||| ||| | | ||||||||||||| |||||||  ||||||||||||||| |||||   ||| |||| |||||| || |||    
T  590 ccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgag 491  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
    || ||  |||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||  ||| ||||||||||||  |||||| |||||    
T  490 ttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttgcttatgttaaatgcgatctttgtcgtacgag 391  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  390 ttgatgtg 383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 19726 - 19519
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| || ||||  |||||||||||||||||||||   ||| |||| |||||| |  | |    
T  19726 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagattttagaatgaatttttatgtg 19627  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
    || ||  |||||||||||||||||| ||||||  ||||||||||| | ||||||||||||||| ||||  ||| |||||||||||| |||||||||| ||    
T  19626 ttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgcttatgttaaatgcgatccttgtcgcacaag 19527  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  19526 ttgatgtg 19519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 6987 - 6789
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg-aatttgtgggagttacaaatg 162  Q
    ||||||||||||| || | | ||||||| ||||| |||||||  ||| |||||||||||||||||||||||||||||| || |||||||||||| |  ||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaatagtttaagaacgaaacttgtgggagttatacctg 6888  T
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||||||||| |||||| || |||||||| ||  | ||||||| ||| | ||| ||||| ||||||||||  ||||||||| ||||||||||    
T  6887 aactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtg 6789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 8823 - 8724
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||| |||||||||||||      |  ||||||| | ||||||||||||||| ||   ||||||||||||||||||||    
T  8823 tgaactcgccatagcgagtagaggccctcgcctcgcgagtccttgtgagacagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtg 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 259
Target Start/End: Original strand, 5760 - 5988
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    |||| |||| || |||||||| | |||||| |||||||||| ||||||| | | ||||||||||||| ||| ||| |||| |||||||||||| | ||||    
T  5760 gtagatttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaaccagtaata 5859  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggtt 229  Q
    ||||||| | | |||| || || || ||  |||||||||| | ||||||||||||| ||||||||||| ||||||||||||| ||| | ||| |||||||    
T  5860 gtttaaggatggattt-tgtgatttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtttaggtt 5958  T
Q  230 aaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||  ||||||| | |||||||||    
T  5959 aaatgcgatctttgtcgcgcaagttgatgt 5988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 259
Target Start/End: Original strand, 666 - 900
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattga------acct 124  Q
    |||| |||| || |||||||| | |||||| |||||||||||||||||| | | ||||||||||||| ||||||| |||| |||||||||      ||||    
T  666 gtagatttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagattgaacct 765  T
Q  125 ggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-t 223  Q
    | ||||||||||| | | |||| || ||||| ||  |||||||||| | ||||||||||||| ||||||||||| ||||||||||||| ||| | ||| |    
T  766 gtaatagtttaaggatggattt-tgtgagttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtt 864  T
Q  224 taggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||||||||  ||||||| | |||||||||    
T  865 taggttaaatgcgatctttgtcgcgcaagttgatgt 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 5e-31; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 260
Target Start/End: Original strand, 39864 - 40040
Alignment:
Q  85 taataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtagagg 184  Q
    |||||||| |||| |||||||  ||| ||| ||| |||||||||||||||||||||||| |||||||||||| |  |||||| |||||||| ||||||||    
T  39864 taataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagagg 39963  T
Q  185 ccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |  |||||||||||| || | ||||||| |||  |||  ||||||||||||||||  |||| |||||||||||||||    
T  39964 ctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtg 40040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 101854 - 101781
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  ||||||||||||||||||||    
T  101854 ccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 101685 - 101648
Alignment:
Q  223 ttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  101685 ttaggttaaatgtgatccttgtcgcacgagttgatgtg 101648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 9536 - 9330
Alignment:
Q  55 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat-agtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | |||||| |||||| ||||| | |||| |||||||| ||||||||  |||||| ||| |||||| || ||    
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttta-gaatgaatttttgtga 9438  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgag 252  Q
      |  |  |||||||||||||||||||||||||  |||||||||||| |||||| ||||||||| | ||| ||||||||||||||| |||||||||||||    
T  9437 actgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaatgcgatccttgtcgcacgag 9338  T
Q  253 ttgatgtg 260  Q
    ||| ||||    
T  9337 ttgttgtg 9330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 45450 - 45658
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctgg-aatagtttaagaacgaatttgtgg- 150  Q
    ||||||| ||||||||||||||||| |||||  |||||||||||| |||||||   |||||||||||||||||| || | |||| ||| |||||| | |     
T  45450 ccttagatgtttttgagtgcctgaa-tatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagacttta-gaatgaattttttgt 45547  T
Q  151 gagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcac 249  Q
    || ||  |  |||||||||||||||||||||||||  |||||||||||| || | ||||||||||| ||||  ||||| ||||||||||  |||||||||    
T  45548 gaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgtttaggataaatgcgatctttgtcgcac 45647  T
Q  250 gagttgatgtg 260  Q
    |||||||||||    
T  45648 gagttgatgtg 45658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 161145 - 160938
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga-atagtttaagaacgaatttgtggga 152  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||| | | ||| |||| |||||| || ||    
T  161145 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagacttt-agaatgaatttttgtga 161047  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat-tctttgttaggttaaatgcgatacttgtcgcacga 251  Q
      |  |  |||| ||||||||||||||||||||  || |||| |||| || | ||||||||||| |||| |||||| |||||| |||  |||||||||||    
T  161046 actgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggttaggataaatgtgatctttgtcgcacga 160947  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  160946 gttgatgtg 160938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 7843 - 7942
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||| ||||  |||||||||||||| |||||||||| ||| | |||||||| ||||||||||  ||||||||||||||||||||    
T  7843 tgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagggtaaatgcgatctttgtcgcacgagttgatgtg 7942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 28935 - 29011
Alignment:
Q  49 gttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    |||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||    
T  28935 gttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 227942 - 227849
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttac 157  Q
    |||||||||||| ||| | | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| ||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagttac 227849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 260
Target Start/End: Original strand, 10283 - 10407
Alignment:
Q  136 agaacgaatttgtgggagttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgc 235  Q
    |||| |||||| || ||||||||  |||||||||||  ||||||||||||  ||||||||||||||  || |||||| | | | ||||||||||||||||    
T  10283 agaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgttaggttaaatgc 10382  T
Q  236 gatacttgtcgcacgagttgatgtg 260  Q
    |||  |||| |||||||||||||||    
T  10383 gatctttgttgcacgagttgatgtg 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 10228 - 10289
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatga 114  Q
    |||||||| |||||||||||||||||| | | ||||||||||||| ||||||| ||||||||    
T  10228 accttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 181
Target Start/End: Complemental strand, 12478 - 12329
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    |||||||||  ||||||||||    ||||| | ||||||||| |||||| | | ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  12478 gtagttttgatccttaagttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaata 12379  T
Q  131 gtttaagaacgaatttgtgggagttacaaatgaactcgccatggcgagtag 181  Q
    | ||||||| | |||| | |||||||||| |||| | ||||| ||||||||    
T  12378 g-ttaagaatggattttttggagttacaactgaatttgccatagcgagtag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 1748 - 1900
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggagttacaaatga 163  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||   ||| |||| |||  | ||| | |   |  |||    
T  1748 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttggaaatctgacctga 1847  T
Q  164 actcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    | ||||||||||||| ||||||  ||||||||||||| |||||||||||||||    
T  1848 attcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaat 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 28470 - 28677
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct-ggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||  ||| | ||| |||| ||| || || ||    
T  28470 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctacgaagacttt-agaatgaaattttgtga 28568  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacga 251  Q
      |  |  |||||||||||||||||| ||||||  |||||||||||||      |||||||||| | ||| ||||||||||||||||  |||||||||||    
T  28569 actgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgcacga 28668  T
Q  252 gttgatgtg 260  Q
    |||||||||    
T  28669 gttgatgtg 28677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 260
Target Start/End: Complemental strand, 133113 - 132906
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    || |||| ||| || || ||     
T  133113 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaattttgtgaa 133014  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgag 252  Q
     |  |  |||||||||||||||||| ||||||  |||||||||||||       ||||| ||| | ||| |||||||||||| |||  ||||||||||||    
T  133013 ctgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtcttacataatgccttgtttaggttaaatgtgatctttgtcgcacgag 132914  T
Q  253 ttgatgtg 260  Q
    ||||||||    
T  132913 ttgatgtg 132906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 6053 - 5959
Alignment:
Q  55 ccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgt 148  Q
    ||||||| ||||||||||||||||||   | ||||||||||||| |||||||  ||| ||||||||||| |||||||||||||||| ||| ||||    
T  6053 ccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaatagtttaagaatgaacttgt 5959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 4968 - 4894
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||    
T  4968 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 4894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 12550 - 12476
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||    
T  12550 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 12476  T

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Target: scaffold0228; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 22502 - 22428
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||||||    
T  22502 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaa 22428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 32543 - 32469
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| |||||||||||||||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    
T  32543 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 32469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 24169 - 24263
Alignment:
Q  43 ccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||||||||| | |||||| | |||||||||||||||  ||| |||||||||||||  ||| || |||| |||||||||||||||||||||||||    
T  24169 ccttaagttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaa 24263  T

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Target: scaffold0357 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 15865 - 15921
Alignment:
Q  160 atgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    ||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||    
T  15865 atgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaat 15921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 19651 - 19747
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgat 257  Q
    |||||||||||| | ||||||||||  |||||||| ||||| |||||||||||||  | ||||||||||||||| ||   |||||||||| ||||||    
T  19651 tgaactcgccatagggagtagaggctctcgcctcgtgagttgcccagttacagaacaccttgttaggttaaatgtgacctttgtcgcacgggttgat 19747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 40265 - 40198
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggt 228  Q
    ||||||||||| |||||||||||||  ||||||||||||| ||||||  ||||| | | |||||||||    
T  40265 tgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggt 40198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 2311 - 2159
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacg-aatttgtggga 152  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||   ||  |||| | || ||||||||    
T  2311 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 2212  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttaccc 205  Q
     |   |  ||||||||||||||||||||||||| |||||||| ||||| ||||    
T  2211 ttctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccc 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 119200 - 119280
Alignment:
Q  43 ccttaagttggaccttagaggtttttgagtgcctgaactatgta--ataatgattagaaaagattctagaatgagattgaac 122  Q
    |||||||||| || ||||| | ||||||||||||||| ||||||  |||||||||||| ||| || |||| |||||||||||    
T  119200 ccttaagttgaacattagatgattttgagtgcctgaa-tatgtataataatgattagacaagtttttagattgagattgaac 119280  T

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Target: scaffold0737 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 1564 - 1663
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  |||||||| ||| | |||| ||||||||  | ||||||||||| ||| ||   ||||||||||||||||||||    
T  1564 tgaactcgccatagcgagtagaggctctcgcctcgtgagatgcccaattacagaacaccttgttaggttacatgtgacctttgtcgcacgagttgatgtg 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 12388 - 12228
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtggga 152  Q
    ||||||| | ||||||||| ||||| |||||  |||||||||||| ||||| | ||||||||||||||||||||| || || ||||| ||| || | |||    
T  12388 ccttagatgcttttgagtgtctgaa-tatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttgga 12291  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
         |  |||||||||||||||||||||||||  || ||||||||||| |||| ||||||||    
T  12290 aactgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa 12228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 103405 - 103504
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  ||||||| ||||||  ||| ||||||||  | ||||||||||||||| ||   |||||| |||||||||||||    
T  103405 tgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatgtg 103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 103234 - 103341
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa 143  Q
    |||||| | |||||||||| || ||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | ||||||| || |||    
T  103234 ttaagtcgaaccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 103333  T
Q  144 tttgtggg 151  Q
    ||| ||||    
T  103334 tttttggg 103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 136134 - 136233
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  ||||||||||||||  ||| ||| ||||  | ||||||||||||||| ||   |||||| |||||||||||||    
T  136134 tgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatgtg 136233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 144842 - 144941
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||||| ||||||||||||  ||||||||||||||  ||| ||| ||||  | ||||||||||||||| ||   |||||| |||||||||||||    
T  144842 tgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatgtg 144941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 63021 - 62947
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| |||||||||||| ||||| | | ||||||||||||| |||||||  |||||||||||||||||||||    
T  63021 ccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 62947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 802 - 732
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    ||||||| | |||||||||||||||| | | ||||||||||||||||||| | ||||||||||||||||||    
T  802 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 3920 - 3777
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaa-cgaatttgtgggagttacaaatg 162  Q
    ||||||||| |||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||  ||  |||| | || |||||||| |   |  ||    
T  3920 ttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacctg 3821  T
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgagttaccca 206  Q
    ||||||||| |||||| ||||||  ||||||||||||| |||||    
T  3820 aactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 16260 - 16334
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  16260 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaa 16334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 16368 - 16413
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttaccca 206  Q
    |||||||||||||||||| ||||||  ||||||||||||| |||||    
T  16368 tgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 16413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 34587 - 34509
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  34587 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 2099 - 2177
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||    
T  2099 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 39219 - 39145
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  39219 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 39145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 16876 - 16950
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||||    
T  16876 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 79016 - 79096
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||| |||||||| | |||||||||| ||||| | | ||||||||||||| || || | |||||||||||||||||||||    
T  79016 agttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 79107 - 79151
Alignment:
Q  171 atggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    |||||||||||||||  |||||||||||||| |||| ||||||||    
T  79107 atggcgagtagaggctctcgcctcgcgagttgcccaattacagaa 79151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 2739 - 2820
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  2739 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 17240 - 17167
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||||||||    
T  17240 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctgga 17167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 17133 - 17078
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaat 216  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||| | |||||||||    
T  17133 tgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 53113 - 53214
Alignment:
Q  36 ttttgccccttaagttggaccttagaggtttttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaatagttt 134  Q
    ||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |||||    
T  53113 ttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagttt 53212  T
Q  135 aa 136  Q
    ||    
T  53213 aa 53214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 53315 - 53354
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagt 200  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  53315 tgaactcgccatagcgagtagaggccctcgcctcgcgagt 53354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 7948 - 8029
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||| ||||||| ||||| | ||| ||||||||||||||||||    
T  7948 agttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 8029  T

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Target: scaffold1137 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 2069 - 2169
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttgtt-aggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    ||||||||||||||| || ||||||  |||||||||||||      |||||||||| | ||||| |||||||||||||| |||||||||||||| |||||    
T  2069 tgaactcgccatggcaagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaaatgcgatccttgtcgcacgagtggatgt 2168  T
Q  260 g 260  Q
    |    
T  2169 g 2169  T

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Target: scaffold1137; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 1962 - 2030
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaac 122  Q
    ||||||| ||||||||||  |||||| | | ||||||||||||| |||||||  |||||||||||||||    
T  1962 ccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaac 2030  T

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Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 5782 - 5854
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||||| ||| ||||||||||||||||    
T  5782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgg 5854  T

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Target: scaffold0628 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 2570 - 2670
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaattctttg-ttaggttaaatgcgatacttgtcgcacgagttgatgt 259  Q
    |||||||||||||||||||||||||  |||||||||||||      |||||||||| | ||| |||||  ||||| ||| ||||||||||||||||||||    
T  2570 tgaactcgccatggcgagtagaggctctcgcctcgcgagtacttgtgttacagaatgccttgtttaggaaaaatgtgatccttgtcgcacgagttgatgt 2669  T
Q  260 g 260  Q
    |    
T  2670 g 2670  T

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Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 717 - 799
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||| |||||||||||||||||||    
T  717 agttgaaccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 799  T

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Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 10097 - 10173
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  10097 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 10173  T

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Target: scaffold0395 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 623 - 695
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||||| ||||| ||||||||||||||    
T  623 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctgg 695  T

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Target: scaffold0165 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 27281 - 27388
Alignment:
Q  33 tagttttgccccttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatag 131  Q
    |||||||| ||||||||||| || ||||| | |||||||||||||||| | | |||||||||||||  ||| || |||  ||||||||||||||| | |     
T  27281 tagttttgacccttaagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgggaaat 27380  T
Q  132 tttaagaa 139  Q
    ||||||||    
T  27381 tttaagaa 27388  T

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Target: scaffold0165; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 27486 - 27526
Alignment:
Q  161 tgaactcgccatggcgagtagaggccatcgcctcgcgagtt 201  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  27486 tgaactcgccatagcgagtagaggccctcgcctcgcgagtt 27526  T

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Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 3937 - 3855
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| |  ||||||||||||||| |||  || |||||||||| ||||| | ||| |||||||||||||||||||    
T  3937 agttgaaccttagatgactttgagtgcctgaac-atgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

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Target: scaffold0165; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 8001 - 7919
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| |  ||||||||||||||| |||  || |||||||||| ||||| | ||| |||||||||||||||||||    
T  8001 agttgaaccttagatgactttgagtgcctgaac-atgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 7919  T

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Target: scaffold1765 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 260
Target Start/End: Complemental strand, 1391 - 1337
Alignment:
Q  206 agttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    ||||||||||| | |||||||||||||||||||  ||||| ||||||||||||||    
T  1391 agttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 1337  T

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Target: scaffold0718 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 4796 - 4878
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| |  ||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  4796 agttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 4878  T

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Target: scaffold0627 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 356 - 290
Alignment:
Q  63 gtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  356 gtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 290  T

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Target: scaffold0427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 13951 - 13869
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||  | ||| |||||||||||||||||||    
T  13951 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaat 13869  T

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Target: scaffold0358 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 392 - 310
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| |||||||    
T  392 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 5168 - 5086
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||| |||||||    
T  5168 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaat 5086  T

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Target: scaffold0352 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 17668 - 17742
Alignment:
Q  54 accttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||    
T  17668 accttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 17742  T

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Target: scaffold0305 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 20863 - 20789
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  20863 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 20789  T

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Target: scaffold0266 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 18619 - 18693
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  18619 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18693  T

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Target: scaffold0235 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 11178 - 11260
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| ||||||||   |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  11178 agttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 14119 - 14027
Alignment:
Q  35 gttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||| ||||  |||||||||||||  ||| || |||| |||||||| ||||||    
T  14119 gttttgtcccttaagttgaaccttagatgattttgagtgcctgaa-tatgtataataatgattaggtaagtttttagattgagattggacctgg 14027  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 20572 - 20498
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | |||||| |||||||||||||||    
T  20572 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaa 20498  T

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Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 29239 - 29149
Alignment:
Q  37 tttgccccttaagttggaccttagaggtttttgagtgcctgaa-ctatgtaataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    |||| ||||||||||| |||||||| | |||||||||||||||  ||| |||||||||||||  ||| || |||| |||||||| ||||||    
T  29239 tttgtcccttaagttgaaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctgg 29149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 20087 - 20247
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaa-tttgtggga 152  Q
    ||||||| | |||||||| ||||||| | | ||||||||| ||| ||||| | ||||||||||||||||||||| || || ||||| ||| ||| ||| |    
T  20087 ccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaatt-aagaatgaactttttggaa 20185  T
Q  153 gttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccagttacagaa 215  Q
    | |  |  |||||||||||||||||||||||||  ||||||||| |||| || | ||||||||    
T  20186 gctg-acctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacagaa 20247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 52372 - 52298
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  52372 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 52298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 167644 - 167721
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  167644 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 714 - 791
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacct 124  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||    
T  714 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 16738 - 16657
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    |||||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| | |||||||||||||    
T  16738 ttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctg 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 16118 - 16047
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | |||||||||||||||||||    
T  16118 ccttagatgcttttgagtgcctgaa-tatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16047  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 207
Target Start/End: Original strand, 25726 - 25879
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaagaacgaatttgtgggag 153  Q
    ||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||| ||   ||  |||| |||||| ||| |     
T  25726 ccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaaa 25825  T
Q  154 ttacaaatgaactcgccatggcgagtagaggccatcgcctcgcgagttacccag 207  Q
    |   |  ||||||||||| |||||| ||||||  ||||||||||||| ||||||    
T  25826 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 25879  T

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Target: scaffold1419 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 374 - 338
Alignment:
Q  163 aactcgccatggcgagtagaggccatcgcctcgcgag 199  Q
    |||||||||||||||||||||||| ||||||||||||    
T  374 aactcgccatggcgagtagaggccctcgcctcgcgag 338  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 28996 - 28924
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctgg 126  Q
    ||||||| | |||||||| ||||||| | | ||||||||||||| ||||| | ||||||||||||||||||||    
T  28996 ccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

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Target: scaffold0121 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 8203 - 8267
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| ||||||||||||||||||    
T  8203 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 8267  T

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Target: scaffold0114 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 15127 - 15213
Alignment:
Q  45 ttaagttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaata 130  Q
    |||||||| ||| |||| | |||||||||||| || |||||  |||||||||||| ||||| | ||| ||||||||||||||||||||    
T  15127 ttaagttgaaccgtagatgcttttgagtgccttaa-tatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaata 15213  T

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Target: scaffold0413 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 15276 - 15349
Alignment:
Q  55 ccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctgga 127  Q
    ||||||| | ||||||||||||||| |||||  |||||||||||| ||||| | ||||||||||||||| |||||    
T  15276 ccttagatgcttttgagtgcctgaa-tatgtttaataatgattaggaaagaatgtagaatgagattgaatctgga 15349  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 12623 - 12670
Alignment:
Q  208 ttacagaattctttgttaggttaaatgcgatacttgtcgcacgagttg 255  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||    
T  12623 ttacagaatgcttgtttaggttaaatgcgattcttgtcgcacgagttg 12670  T

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Target: scaffold1257 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 2030 - 2084
Alignment:
Q  207 gttacagaattctttgtt-aggttaaatgcgatacttgtcgcacgagttgatgtg 260  Q
    |||||||||| | ||||| ||||||||||||||  ||||||||||||||||||||    
T  2030 gttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtg 2084  T

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Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 1370 - 1288
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatg-taataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| |  |||||||||||||||  |  ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  1370 agttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaat 1288  T

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Target: scaffold0403 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 5304 - 5222
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||| ||||  | | ||||||||||||| ||||| | ||| |||||||||||||||||||    
T  5304 agttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 5222  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 13262 - 13340
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctg 125  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||||||| ||||| | ||| |||||||||| ||||    
T  13262 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctg 13340  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 32520 - 32438
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | |||||||||||||||| | | ||||||||| ||| ||||| | | | |||||||||||||||||||    
T  32520 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaat 32438  T

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Target: scaffold0088 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 21357 - 21275
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| |||||| ||||||||||| | | ||||||||||||  ||||| | ||| ||||||||| |||||||||    
T  21357 agttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaat 21275  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 39592 - 39666
Alignment:
Q  55 ccttagaggtttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    ||||||| | |||||||| ||||||| | | || |||||||||| ||||| | ||||||||||||||||||||||    
T  39592 ccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 39666  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 40306 - 40242
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||||| |  || ||||||||||||||||||    
T  40306 ttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaa 40242  T

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Target: scaffold0540 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 684 - 741
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaa 121  Q
    |||||||||||||||| | | ||||||||||||| ||||| | |||||||||||||||    
T  684 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 741  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 16537 - 16473
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||||| | ||| | ||||||||||||||||    
T  16537 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 35508 - 35574
Alignment:
Q  32 gtagttttgccccttaagttggaccttagaggtttttgagtgcctgaactatg--taataatgattag 97  Q
    ||||||||| ||||||||||| |||||| | | ||||||||||||||| ||||  |||||||||||||    
T  35508 gtagttttgtcccttaagttgaaccttaaatgattttgagtgcctgaa-tatgtataataatgattag 35574  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 47442 - 47360
Alignment:
Q  48 agttggaccttagaggtttttgagtgcctgaactatgt--aataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||| |||||||| | ||||||||| ||||| |||||  |||||||||||| || || | ||| |||||||||||||||||||    
T  47442 agttgaaccttagatgcttttgagtgtctgaa-tatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaat 47360  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 23973 - 24037
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaa 128  Q
    |||||||||||||||| | | ||||||||||||| ||| | | ||| ||||||||||||||||||    
T  23973 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 24037  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 52017 - 51953
Alignment:
Q  66 tttgagtgcctgaacta-tgtaataatgattagaaaagattctagaatgagattgaacctggaat 129  Q
    ||||||||||||||| | | ||||||||||||| ||||| | ||| | |||||||||||||||||    
T  52017 tttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaat 51953  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 80788 - 80716
Alignment:
Q  65 ttttgagtgcctgaac-tatgtaataatgattagaaaagattctagaatgagattgaacctggaatagtttaa 136  Q
    |||||||||||||||| | | |||||||||||||  ||| || |||| ||||||||||||||| | |||||||    
T  80788 ttttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 80716  T

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