View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20965_high_7 (Length: 292)
Name: NF20965_high_7
Description: NF20965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20965_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 276
Target Start/End: Original strand, 25708379 - 25708645
Alignment:
| Q |
10 |
gcagaaagagggctctaaattctaaatagaaaagtgtgtatgctatttgaggggtggttatgttaccacattcattggttagtgtcaaaagttgatacca |
109 |
Q |
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| T |
25708379 |
gcagaaagagggctctaaattctaaatagaaaagtgtgtatgctatttgaggggtggttatgttaccacattcattggttagtgtcaaaagttgatacca |
25708478 |
T |
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| Q |
110 |
taataagatggtatatgaacacgttaacacccctttaatatgattccactgggaagcatatattctggacagggaaaaattggctttttatgtgtcttgt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25708479 |
taataagatggtatatgaacacgttaacacccctttaatatgattccactgggaagcatatattctggacagggaaaaattggctttttatgtgtcttgt |
25708578 |
T |
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| Q |
210 |
caaatttcaattctaacagaaatttgcatgtaatttgaggtaaaatgtaagcaattatatgtggttc |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25708579 |
caaatttcaattctaacagaaatttgcatgtaatttgaggtaaaatgtaagcaattatatgtggttc |
25708645 |
T |
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