View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20965_low_16 (Length: 248)
Name: NF20965_low_16
Description: NF20965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20965_low_16 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 25708358 - 25708120
Alignment:
| Q |
1 |
catacacataaattgataccaatgcaaattgaatgatgttagtggtatttattaaccgatcataaagttattgtacaatattaagtactagtgtgacaag |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25708358 |
catacacataaattgatcccaatgcaaattgaatgatgttagtggtatttattaaccgatcataaagttattgtacaatattaagtactagtgtgacaag |
25708259 |
T |
|
| Q |
101 |
agagttcacccaaacacttcaactatgagagatcaaagagtccttcatattgaagatagtactagtcaaatagaaaggtctaagtgggttttggattctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25708258 |
agagttcacccaaacacttcaactatgagagatcaaagagtccttcatattgaagatagtactagtcaaatagaaaggtctaagtgggttttggattctc |
25708159 |
T |
|
| Q |
201 |
ctaatccaccacctttatggaagaagctattttcttcat |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
25708158 |
ctaatccaccacctttatggaagaagctattttcttcat |
25708120 |
T |
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