View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20965_low_4 (Length: 559)

Name: NF20965_low_4
Description: NF20965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20965_low_4
NF20965_low_4
[»] chr7 (33 HSPs)
chr7 (273-549)||(25200004-25200282)
chr7 (158-216)||(25200397-25200455)
chr7 (17-81)||(25200539-25200603)
chr7 (292-360)||(20337433-20337501)
chr7 (292-354)||(41018786-41018848)
chr7 (310-348)||(41396906-41396944)
chr7 (292-353)||(1471178-1471239)
chr7 (183-216)||(30864455-30864488)
chr7 (183-216)||(31274567-31274600)
chr7 (179-216)||(33050179-33050216)
chr7 (171-216)||(37352017-37352062)
chr7 (310-354)||(7817776-7817820)
chr7 (184-216)||(37325857-37325889)
chr7 (181-216)||(2347097-2347132)
chr7 (182-216)||(19880269-19880303)
chr7 (182-216)||(29162317-29162351)
chr7 (317-355)||(31844503-31844541)
chr7 (182-216)||(31982056-31982090)
chr7 (183-216)||(2469703-2469736)
chr7 (183-216)||(3040412-3040445)
chr7 (316-361)||(3343210-3343255)
chr7 (183-216)||(4971290-4971323)
chr7 (183-216)||(10656632-10656665)
chr7 (183-216)||(19426580-19426613)
chr7 (183-216)||(22330658-22330691)
chr7 (183-216)||(27164875-27164908)
chr7 (184-213)||(37173015-37173044)
chr7 (183-216)||(37856192-37856225)
chr7 (183-216)||(41966332-41966365)
chr7 (183-216)||(41985127-41985160)
chr7 (316-348)||(21822492-21822524)
chr7 (180-216)||(42663081-42663117)
chr7 (313-349)||(46725749-46725785)
[»] chr5 (38 HSPs)
chr5 (178-216)||(30574415-30574453)
chr5 (310-357)||(41175590-41175637)
chr5 (177-216)||(42699051-42699090)
chr5 (182-216)||(3263546-3263580)
chr5 (182-216)||(9599766-9599800)
chr5 (182-216)||(12718418-12718452)
chr5 (182-216)||(12779644-12779678)
chr5 (183-216)||(9594478-9594511)
chr5 (180-216)||(16143387-16143423)
chr5 (181-216)||(4719648-4719683)
chr5 (292-355)||(18695441-18695504)
chr5 (181-216)||(19127122-19127157)
chr5 (181-216)||(39595270-39595305)
chr5 (182-216)||(3109625-3109659)
chr5 (310-348)||(3640090-3640128)
chr5 (304-358)||(4088578-4088632)
chr5 (310-348)||(15008443-15008481)
chr5 (310-348)||(15952938-15952976)
chr5 (178-216)||(28903986-28904024)
chr5 (178-216)||(28940381-28940419)
chr5 (182-216)||(34381011-34381045)
chr5 (183-216)||(6865814-6865847)
chr5 (292-353)||(6940037-6940098)
chr5 (310-355)||(10649575-10649620)
chr5 (183-216)||(12512803-12512836)
chr5 (183-216)||(14914372-14914405)
chr5 (292-345)||(21012689-21012742)
chr5 (183-216)||(23991172-23991205)
chr5 (292-349)||(24859246-24859303)
chr5 (183-216)||(28501592-28501625)
chr5 (183-216)||(28811429-28811462)
chr5 (183-216)||(33823731-33823764)
chr5 (183-216)||(36713216-36713249)
chr5 (183-216)||(38500943-38500976)
chr5 (304-349)||(39054721-39054766)
chr5 (179-216)||(40223823-40223860)
chr5 (292-356)||(9939316-9939380)
chr5 (181-213)||(11464163-11464195)
[»] chr1 (45 HSPs)
chr1 (180-216)||(13813555-13813591)
chr1 (316-358)||(32914955-32914997)
chr1 (179-216)||(5309078-5309115)
chr1 (291-358)||(1820989-1821056)
chr1 (310-353)||(10889934-10889977)
chr1 (183-214)||(36439657-36439688)
chr1 (181-216)||(41507221-41507256)
chr1 (181-216)||(50528095-50528130)
chr1 (182-216)||(11597647-11597681)
chr1 (178-216)||(16658433-16658471)
chr1 (182-216)||(20288378-20288412)
chr1 (182-216)||(25995459-25995493)
chr1 (322-360)||(26208111-26208149)
chr1 (313-355)||(29154921-29154963)
chr1 (182-216)||(32821634-32821668)
chr1 (310-348)||(33358051-33358089)
chr1 (316-358)||(36577295-36577337)
chr1 (183-216)||(6829821-6829854)
chr1 (304-353)||(8447870-8447919)
chr1 (183-216)||(9011645-9011678)
chr1 (316-353)||(13489808-13489845)
chr1 (179-216)||(15061841-15061878)
chr1 (183-216)||(25302681-25302714)
chr1 (183-216)||(27687546-27687579)
chr1 (179-216)||(29362730-29362767)
chr1 (183-216)||(30439250-30439283)
chr1 (183-216)||(31427995-31428028)
chr1 (183-216)||(39669806-39669839)
chr1 (183-216)||(40596081-40596114)
chr1 (183-216)||(40612114-40612147)
chr1 (183-216)||(42256460-42256493)
chr1 (183-216)||(45740582-45740615)
chr1 (183-216)||(48325805-48325838)
chr1 (183-216)||(49425738-49425771)
chr1 (183-216)||(49453491-49453524)
chr1 (183-216)||(50226917-50226950)
chr1 (181-209)||(3606139-3606167)
chr1 (17-69)||(3797844-3797896)
chr1 (177-205)||(12990518-12990546)
chr1 (180-216)||(16836142-16836178)
chr1 (180-216)||(25098826-25098862)
chr1 (180-216)||(30687049-30687085)
chr1 (184-216)||(32966268-32966300)
chr1 (184-216)||(36231744-36231776)
chr1 (177-205)||(49020453-49020481)
[»] chr8 (29 HSPs)
chr8 (177-216)||(20288527-20288566)
chr8 (177-216)||(21075156-21075195)
chr8 (183-216)||(1065417-1065450)
chr8 (183-216)||(30927969-30928002)
chr8 (180-216)||(21273748-21273784)
chr8 (185-216)||(21648969-21649000)
chr8 (296-355)||(24795375-24795434)
chr8 (181-216)||(38844828-38844863)
chr8 (181-216)||(43873729-43873764)
chr8 (182-216)||(1796495-1796529)
chr8 (178-216)||(7596929-7596967)
chr8 (178-216)||(28927676-28927714)
chr8 (178-216)||(45101391-45101429)
chr8 (183-216)||(5502371-5502404)
chr8 (292-353)||(10644689-10644750)
chr8 (183-216)||(12732842-12732875)
chr8 (183-216)||(22852877-22852910)
chr8 (183-216)||(41273515-41273548)
chr8 (183-216)||(41293759-41293792)
chr8 (183-216)||(43419879-43419912)
chr8 (183-216)||(44380652-44380685)
chr8 (183-211)||(3650113-3650141)
chr8 (291-355)||(6445301-6445365)
chr8 (316-348)||(7472920-7472952)
chr8 (172-216)||(10553121-10553165)
chr8 (304-348)||(14707236-14707280)
chr8 (177-205)||(27300340-27300368)
chr8 (181-209)||(30943884-30943912)
chr8 (184-216)||(39719286-39719318)
[»] chr4 (54 HSPs)
chr4 (181-216)||(7037522-7037557)
chr4 (292-355)||(27371263-27371326)
chr4 (178-216)||(9032775-9032813)
chr4 (182-216)||(39241328-39241362)
chr4 (183-216)||(1796366-1796399)
chr4 (183-216)||(5208365-5208398)
chr4 (183-216)||(27001447-27001480)
chr4 (183-216)||(51377331-51377364)
chr4 (183-216)||(51717320-51717353)
chr4 (183-216)||(55268039-55268072)
chr4 (304-348)||(21172414-21172458)
chr4 (181-216)||(6370978-6371013)
chr4 (181-216)||(30042132-30042167)
chr4 (181-216)||(32365694-32365729)
chr4 (181-216)||(33438043-33438078)
chr4 (181-216)||(37547063-37547098)
chr4 (182-216)||(11997684-11997718)
chr4 (182-216)||(15596395-15596429)
chr4 (292-346)||(23662211-23662265)
chr4 (182-216)||(26885290-26885324)
chr4 (182-216)||(30778291-30778325)
chr4 (182-216)||(39010175-39010209)
chr4 (178-216)||(44368240-44368278)
chr4 (292-349)||(46038785-46038840)
chr4 (183-216)||(169540-169573)
chr4 (310-355)||(1815887-1815932)
chr4 (183-216)||(3222989-3223022)
chr4 (178-215)||(4100794-4100831)
chr4 (183-216)||(4896538-4896571)
chr4 (183-216)||(10994190-10994223)
chr4 (183-216)||(11064127-11064160)
chr4 (183-216)||(13267516-13267549)
chr4 (183-216)||(24235320-24235353)
chr4 (183-216)||(26440676-26440709)
chr4 (183-216)||(31221413-31221446)
chr4 (180-213)||(31240645-31240678)
chr4 (314-355)||(32696674-32696715)
chr4 (183-216)||(34116578-34116611)
chr4 (183-216)||(34259815-34259848)
chr4 (183-216)||(41119508-41119541)
chr4 (292-353)||(42815527-42815588)
chr4 (183-216)||(43168752-43168785)
chr4 (183-216)||(46173550-46173583)
chr4 (179-216)||(51039154-51039191)
chr4 (183-216)||(51359828-51359861)
chr4 (319-360)||(52846110-52846151)
chr4 (183-216)||(54036556-54036589)
chr4 (313-348)||(4949648-4949684)
chr4 (328-356)||(24509272-24509300)
chr4 (184-216)||(28676179-28676211)
chr4 (292-360)||(33423461-33423529)
chr4 (313-353)||(43769854-43769894)
chr4 (328-360)||(47744393-47744425)
chr4 (180-216)||(51389112-51389148)
[»] chr2 (42 HSPs)
chr2 (181-216)||(25801840-25801875)
chr2 (182-216)||(30487507-30487541)
chr2 (178-216)||(30856802-30856840)
chr2 (183-216)||(34144589-34144622)
chr2 (183-216)||(37966367-37966400)
chr2 (180-216)||(4344446-4344482)
chr2 (310-362)||(37105778-37105830)
chr2 (177-216)||(36132968-36133007)
chr2 (313-348)||(41586561-41586596)
chr2 (307-353)||(2221130-2221176)
chr2 (313-355)||(3012738-3012780)
chr2 (178-216)||(4738610-4738648)
chr2 (310-348)||(5054748-5054786)
chr2 (313-347)||(9377599-9377633)
chr2 (313-355)||(23352793-23352835)
chr2 (178-216)||(27307269-27307307)
chr2 (183-216)||(2308360-2308393)
chr2 (183-216)||(3196125-3196158)
chr2 (315-348)||(4138293-4138326)
chr2 (183-216)||(5167780-5167813)
chr2 (183-216)||(6365186-6365219)
chr2 (292-349)||(10216972-10217029)
chr2 (183-216)||(10687941-10687974)
chr2 (180-213)||(12600045-12600078)
chr2 (183-216)||(14140375-14140408)
chr2 (183-216)||(15283288-15283321)
chr2 (183-216)||(29795447-29795480)
chr2 (183-216)||(31296883-31296916)
chr2 (183-216)||(33296109-33296142)
chr2 (292-353)||(34134658-34134719)
chr2 (183-216)||(35171264-35171297)
chr2 (179-216)||(35792666-35792703)
chr2 (183-216)||(36435681-36435714)
chr2 (183-216)||(36909881-36909914)
chr2 (291-360)||(39147887-39147956)
chr2 (183-216)||(41040266-41040299)
chr2 (183-216)||(42283277-42283310)
chr2 (177-213)||(5095994-5096030)
chr2 (180-216)||(21490700-21490736)
chr2 (316-356)||(24562902-24562942)
chr2 (184-216)||(36582260-36582292)
chr2 (184-216)||(38246789-38246821)
[»] scaffold0141 (1 HSPs)
scaffold0141 (316-357)||(12078-12119)
[»] chr6 (17 HSPs)
chr6 (183-216)||(2056783-2056816)
chr6 (292-349)||(3552047-3552104)
chr6 (179-216)||(3660391-3660428)
chr6 (183-216)||(9954548-9954581)
chr6 (181-216)||(2163700-2163735)
chr6 (181-216)||(2175333-2175368)
chr6 (292-359)||(4820489-4820556)
chr6 (181-216)||(32457290-32457325)
chr6 (310-348)||(34037105-34037144)
chr6 (178-216)||(6435031-6435069)
chr6 (319-360)||(754319-754360)
chr6 (183-216)||(3339537-3339570)
chr6 (183-216)||(11785355-11785388)
chr6 (179-216)||(29376753-29376790)
chr6 (183-216)||(30796113-30796146)
chr6 (310-354)||(18141188-18141232)
chr6 (316-356)||(35213446-35213486)
[»] chr3 (54 HSPs)
chr3 (183-216)||(3069612-3069645)
chr3 (183-216)||(20714243-20714276)
chr3 (183-216)||(32931956-32931989)
chr3 (183-216)||(36818956-36818989)
chr3 (180-216)||(462439-462475)
chr3 (177-216)||(1901964-1902003)
chr3 (177-216)||(1911410-1911449)
chr3 (176-215)||(4140613-4140652)
chr3 (177-216)||(5398912-5398951)
chr3 (177-216)||(9719479-9719518)
chr3 (181-216)||(11327106-11327141)
chr3 (181-216)||(23163195-23163230)
chr3 (313-356)||(37411018-37411061)
chr3 (316-355)||(50206856-50206895)
chr3 (313-355)||(6999313-6999355)
chr3 (182-216)||(14957835-14957869)
chr3 (182-216)||(20380927-20380961)
chr3 (183-213)||(28263551-28263581)
chr3 (182-216)||(51464310-51464344)
chr3 (178-216)||(52454132-52454170)
chr3 (183-216)||(108431-108464)
chr3 (307-347)||(346485-346526)
chr3 (183-216)||(3958056-3958089)
chr3 (183-216)||(8254027-8254060)
chr3 (310-354)||(9158759-9158804)
chr3 (183-216)||(12792638-12792671)
chr3 (181-210)||(16295462-16295491)
chr3 (183-216)||(18169157-18169190)
chr3 (179-216)||(19418195-19418232)
chr3 (183-216)||(20215948-20215981)
chr3 (292-349)||(23155330-23155387)
chr3 (308-353)||(29030694-29030739)
chr3 (183-216)||(30400194-30400227)
chr3 (183-216)||(34021501-34021534)
chr3 (183-216)||(34607958-34607991)
chr3 (183-216)||(35272027-35272060)
chr3 (183-216)||(35376589-35376622)
chr3 (183-216)||(38944179-38944212)
chr3 (181-210)||(42643233-42643262)
chr3 (183-216)||(43169780-43169813)
chr3 (179-216)||(43460377-43460414)
chr3 (183-216)||(47683801-47683834)
chr3 (183-216)||(48405410-48405443)
chr3 (183-216)||(48945847-48945880)
chr3 (183-216)||(49196696-49196729)
chr3 (310-366)||(51343548-51343604)
chr3 (183-216)||(52564672-52564705)
chr3 (183-216)||(53932429-53932462)
chr3 (177-213)||(1295326-1295362)
chr3 (292-356)||(35376966-35377030)
chr3 (183-215)||(41877650-41877682)
chr3 (181-213)||(46574085-46574117)
chr3 (184-216)||(47101523-47101555)
chr3 (316-356)||(55400145-55400185)
[»] scaffold0532 (1 HSPs)
scaffold0532 (304-355)||(11098-11149)
[»] scaffold0286 (1 HSPs)
scaffold0286 (181-216)||(18674-18709)
[»] scaffold0136 (1 HSPs)
scaffold0136 (316-355)||(38571-38610)
[»] scaffold0026 (1 HSPs)
scaffold0026 (181-216)||(113623-113658)
[»] scaffold0011 (2 HSPs)
scaffold0011 (182-213)||(18594-18625)
scaffold0011 (183-216)||(219702-219735)
[»] scaffold0003 (1 HSPs)
scaffold0003 (183-213)||(88808-88838)
[»] scaffold0514 (1 HSPs)
scaffold0514 (183-216)||(1534-1567)
[»] scaffold0592 (1 HSPs)
scaffold0592 (178-210)||(905-937)
[»] scaffold0131 (1 HSPs)
scaffold0131 (184-216)||(15572-15604)


Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 273 - 549
Target Start/End: Complemental strand, 25200282 - 25200004
Alignment:
Q  273 cgtgtcaatatcaactaattttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaa-atattattttca 371  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||  |||||||||||||||||||||||||||| ||| ||||||||||||    
T  25200282 cgtgtcaatatctactaattttataaatttctaattatcacataagttgttaagcaaatagttgttcaaataacacacctcttcaaatatattattttca 25200183  T
Q  372 cctaccagaatatttttaaaacatgactctacctacctaggaatacaatcatacaccttccttaaaacgattgtaggagtaggtttggttctatatgttc 471  Q
     ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25200182 tctaccgggatatttttaaaacatgactctacctacctaggaatacaatcatacaccttccttaaaacgattgtaggagtaggtttggttttatatgttc 25200083  T
Q  472 acattgaggccaaccaagtggccaacatttttctttagtttggtcttgctatgtctaatgaggata-tttgtccctatg 549  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  25200082 acattgaggccaaccaagtggccaacatttttcttaagtttgatcttgctatgtctaatgaggatattttgtccctatg 25200004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 25200455 - 25200397
Alignment:
Q  158 gtatttccgagctttattcaaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25200455 gtatttccgagctttattcaaaaatgagaaatgatatttgtacaaccaatttgtgacaa 25200397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 25200603 - 25200539
Alignment:
Q  17 acatataacaatggatatccttaacaactaagttatgctcatggggacgaataagttacttgata 81  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  25200603 acatataacaatgtatatccttaccaactaagttatgctcatggggacgaaaaagttacttgata 25200539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 20337433 - 20337501
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    ||||||||||| || ||||| ||||||||||||   |||||||||||||||||||||||||||| ||||    
T  20337433 tttgtaaatttatggttatctcataagttgtcatacaaatagttgttcaaataacacacctctttaaaa 20337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 41018786 - 41018848
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctct 354  Q
    ||||||||||| ||||| ||| | ||||||||| |||||||||| ||||||||||||| ||||    
T  41018786 tttgtaaatttatgattgtcataaaagttgtcacctaaatagttattcaaataacacaactct 41018848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 41396944 - 41396906
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  41396944 tcacataagttgtcaactaaatatttgttcaaataacac 41396906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 1471239 - 1471178
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| || || ||| |||||||||| |  ||||||||||||||||||||||||||    
T  1471239 tttgtaaatttatggttgtcaaataagttgtctatcaaatagttgttcaaataacacacctc 1471178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 30864488 - 30864455
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  30864488 gagaaatgatatttgtacaaccaatttgtgacaa 30864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 31274600 - 31274567
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  31274600 gagaaatgatatttgtacaaccaatttgtgacaa 31274567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 33050179 - 33050216
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  33050179 aaatgagaaatgatatttgtacaaccattttgtgacaa 33050216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 37352062 - 37352017
Alignment:
Q  171 ttattcaaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  37352062 ttattaaaaaaagagaaatgatatttgtacaaccactttgtgacaa 37352017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 7817776 - 7817820
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctct 354  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||    
T  7817776 tcacataagttgtcaaccaaatggttgttcaaataacactcctct 7817820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 37325889 - 37325857
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||    
T  37325889 agaaatgatatttgtacaaccaatttgtgacaa 37325857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 2347132 - 2347097
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2347132 atgagaaatgatatttgtacaaccattttgtgacaa 2347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 19880303 - 19880269
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||| |||||||||||||||||||||||    
T  19880303 tgagaaatgatgtttgtacaaccaatttgtgacaa 19880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 29162351 - 29162317
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| |||||||||||||    
T  29162351 tgagaaatgatatttgtacaatcaatttgtgacaa 29162317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 31844541 - 31844503
Alignment:
Q  317 agttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  31844541 agttgtcaactaaatagttgtacaaataacactcctctt 31844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 31982056 - 31982090
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  31982056 tgagaaatgatatttgtacaaccactttgtgacaa 31982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 2469703 - 2469736
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  2469703 gagaaatgatatttgtacaaccactttgtgacaa 2469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 3040412 - 3040445
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||| ||||||||||||||||||||||||||    
T  3040412 gagaaattatatttgtacaaccaatttgtgacaa 3040445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 3343255 - 3343210
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctcttaaaaat 361  Q
    ||||||||||  ||||||||||||||||||||| | ||||||||||    
T  3343255 aagttgtcaatcaaatagttgttcaaataacactcatcttaaaaat 3343210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 4971290 - 4971323
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  4971290 gagaaatgatatttgtacaaccattttgtgacaa 4971323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 10656632 - 10656665
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||||    
T  10656632 gagaaatgatatttgtacaaccaatttctgacaa 10656665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 19426580 - 19426613
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaa 19426613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 22330691 - 22330658
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  22330691 gagaaatgatatttgtacaaccactttgtgacaa 22330658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 27164908 - 27164875
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  27164908 gagaaatgatatttgtacaatcaatttgtgacaa 27164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 213
Target Start/End: Complemental strand, 37173044 - 37173015
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtga 213  Q
    ||||||||||||||||||||||||||||||    
T  37173044 agaaatgatatttgtacaaccaatttgtga 37173015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 37856225 - 37856192
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  37856225 gagaaatgatatttgtacaaccattttgtgacaa 37856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41966332 - 41966365
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  41966332 gagaaatgatatttgtacaaccactttgtgacaa 41966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 41985160 - 41985127
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  41985160 gagaaatgatatttgtacaatcaatttgtgacaa 41985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 21822524 - 21822492
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacac 348  Q
    |||||||||||||||| ||||||||||||||||    
T  21822524 aagttgtcaactaaatggttgttcaaataacac 21822492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 42663081 - 42663117
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  42663081 aatgagaaatgatatttgtacatccattttgtgacaa 42663117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 46725749 - 46725785
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacaca 349  Q
    |||||||||||||| |||||||| |||||||||||||    
T  46725749 cataagttgtcaacaaaatagttattcaaataacaca 46725785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 30574453 - 30574415
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30574453 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 30574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 41175637 - 41175590
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctcttaa 357  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  41175637 tcacataagttgtcaaccaaatggttgttcaaataacactcctcttaa 41175590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 42699051 - 42699090
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  42699051 aaaaatgagaaatgatatttgtacaaccattttgtgacaa 42699090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 3263580 - 3263546
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  3263580 tgagaaatgatatttgtacaaccaatttgtgacaa 3263546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 9599800 - 9599766
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  9599800 tgagaaatgatatttgtacaaccaatttgtgacaa 9599766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 12718452 - 12718418
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  12718452 tgagaaatgatatttgtacaaccaatttgtgacaa 12718418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 12779678 - 12779644
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  12779678 tgagaaatgatatttgtacaaccaatttgtgacaa 12779644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9594478 - 9594511
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  9594478 gagaaatgatatttgtacaaccaatttgtgacaa 9594511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 16143387 - 16143423
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||||||||    
T  16143387 aatgagaaatgatatttgtacaaccattttgtgacaa 16143423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 4719648 - 4719683
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4719648 atgagaaatgatatttgtacaaccaatttttgacaa 4719683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 18695441 - 18695504
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||||||| || || ||| |||||||||| |  |||| |||||||||||||||||||||||    
T  18695441 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctctt 18695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 19127122 - 19127157
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19127122 atgagaaatgatatttgtacaaccactttgtgacaa 19127157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 39595270 - 39595305
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  39595270 atgagaaatgatatttgtacaaccactttgtgacaa 39595305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 3109659 - 3109625
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| |||||||||||||    
T  3109659 tgagaaatgatatttgtacaatcaatttgtgacaa 3109625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 3640128 - 3640090
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    |||||||||||||||||||||| || |||||||||||||    
T  3640128 tcacataagttgtcaactaaatggtagttcaaataacac 3640090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 358
Target Start/End: Original strand, 4088578 - 4088632
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaa 358  Q
    ||||| ||||||| ||||||||  |||||| ||||||||||||||| ||||||||    
T  4088578 tgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactcttaaa 4088632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 15008481 - 15008443
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  15008481 tcacataagttgtcaaccaaataattgttcaaataacac 15008443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 15952976 - 15952938
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  15952976 tcacataagttgtcaaccaaatggttgttcaaataacac 15952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 28903986 - 28904024
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  28903986 aaaatgagaaatgatatttgtacaaccacattgtgacaa 28904024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 28940381 - 28940419
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  28940381 aaaatgagaaatgatatttgtacaaccacattgtgacaa 28940419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 34381011 - 34381045
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  34381011 tgagaaatgatatttgtacaaccactttgtgacaa 34381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 6865847 - 6865814
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  6865847 gagaaatgatatttgtacaaccactttgtgacaa 6865814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 6940098 - 6940037
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| || || ||| |||||||||| |  |||| |||||||||||||||||||||    
T  6940098 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 6940037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 10649575 - 10649620
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||| ||||||||||| |||| |||||||||||||||| ||||||    
T  10649575 tcacaaaagttgtcaaccaaatggttgttcaaataacactcctctt 10649620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12512803 - 12512836
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||| |||||||||||||||||    
T  12512803 gagaaatgatatttgtgcaaccaatttgtgacaa 12512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 14914372 - 14914405
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaa 14914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 21012689 - 21012742
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataa 345  Q
    ||||||||||| || |||||| |||| ||||||| ||||| |||||||||||||    
T  21012689 tttgtaaatttgtgtttatcaaataaattgtcaattaaatggttgttcaaataa 21012742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 23991205 - 23991172
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  23991205 gagaaatgatatttgtacaaccactttgtgacaa 23991172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 24859303 - 24859246
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    ||||||||| | ||||| ||| ||||||||||||| ||||| || |||||||||||||    
T  24859303 tttgtaaatatatgattgtcaaataagttgtcaaccaaataattattcaaataacaca 24859246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 28501592 - 28501625
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaa 28501625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 28811429 - 28811462
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  28811429 gagaaatgatatttgtacaaccactttgtgacaa 28811462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 33823764 - 33823731
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| |||||||||    
T  33823764 gagaaatgatatttgtacaaccaacttgtgacaa 33823731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 36713249 - 36713216
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  36713249 gagaaatgatatttgtacaaccactttgtgacaa 36713216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 38500943 - 38500976
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  38500943 gagaaatgatatttgtacaaccattttgtgacaa 38500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 39054721 - 39054766
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    ||||||||||| ||||||||| |||||| | |||||||||||||||    
T  39054721 tgattatcacaaaagttgtcatctaaatggatgttcaaataacaca 39054766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 40223860 - 40223823
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  40223860 aaatgagaaattatatttgtacaaccactttgtgacaa 40223823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 9939380 - 9939316
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    ||||||||||| || || ||| |||| ||||| |  |||| ||||||||||||||||||||||||    
T  9939380 tttgtaaatttatggttgtcaaataaattgtctatcaaatggttgttcaaataacacacctctta 9939316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 11464195 - 11464163
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtga 213  Q
    |||| ||||||||||||||||||||||||||||    
T  11464195 atgaaaaatgatatttgtacaaccaatttgtga 11464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 13813555 - 13813591
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||||    
T  13813555 aatgagaaatgatatttgtacaaccaatttgtgacaa 13813591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 32914997 - 32914955
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctcttaaa 358  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  32914997 aagttgtcaaccaaatagttgttcaaataacactcctcttaaa 32914955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 5309115 - 5309078
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5309115 aaatgagaaatgatatttgtacaaccactttgtgacaa 5309078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 1821056 - 1820989
Alignment:
Q  291 ttttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaa 358  Q
    |||||||||| | ||||| |||||||||||||||   ||| | |||||||||| ||||||||||||||    
T  1821056 ttttgtaaatctatgattgtcacataagttgtcatacaaacaattgttcaaatcacacacctcttaaa 1820989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 10889977 - 10889934
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||    
T  10889977 tcacaaaagttgtcaaccaaatagttgttcaaataacactcctc 10889934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 214
Target Start/End: Original strand, 36439657 - 36439688
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgac 214  Q
    ||||||||||||||||||||||||||||||||    
T  36439657 gagaaatgatatttgtacaaccaatttgtgac 36439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 41507256 - 41507221
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  41507256 atgagaaatgatatttgtacaaccattttgtgacaa 41507221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 50528130 - 50528095
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| |||||||||||||    
T  50528130 atgagaaatgatatttgtacaatcaatttgtgacaa 50528095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 11597647 - 11597681
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||| |||||||||||||||||||||    
T  11597647 tgagaaatgatatctgtacaaccaatttgtgacaa 11597681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 16658433 - 16658471
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  16658433 aaaatgagaaatgatatttgtacaaccacattgtgacaa 16658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 20288412 - 20288378
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| ||||||||||||||    
T  20288412 tgagaaatgatatttgtacatccaatttgtgacaa 20288378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25995459 - 25995493
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| |||||||||||||    
T  25995459 tgagaaatgatatttgtacaatcaatttgtgacaa 25995493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 26208149 - 26208111
Alignment:
Q  322 tcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  26208149 tcaattaaatagttgttcaaataacacaactcttaaaaa 26208111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 29154921 - 29154963
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||||| |||| |||||||||||||||| ||||||    
T  29154921 cataagttgtcaaccaaatggttgttcaaataacactcctctt 29154963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 32821634 - 32821668
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  32821634 tgagaaatgatatttgtacaaccactttgtgacaa 32821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 33358089 - 33358051
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  33358089 tcacataagttgtcaaccaaatggttgttcaaataacac 33358051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 36577337 - 36577295
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctcttaaa 358  Q
    ||||||||||| |||| |||||||||||||||| |||||||||    
T  36577337 aagttgtcaaccaaatggttgttcaaataacactcctcttaaa 36577295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 6829854 - 6829821
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  6829854 gagaaatgatatttgtacaactaatttgtgacaa 6829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 8447870 - 8447919
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||| ||||||||||| ||||||||||  ||||||||||||||| ||||    
T  8447870 tgattgtcacataagttatcaactaaatgattgttcaaataacactcctc 8447919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9011645 - 9011678
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaa 9011678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 13489808 - 13489845
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  13489808 aagttgtcaaccaaatagttgttcaaataacactcctc 13489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15061841 - 15061878
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  15061841 aaatgagaaatgatatttgtataaccactttgtgacaa 15061878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 25302714 - 25302681
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  25302714 gagaaatgatatttgtacaaccactttgtgacaa 25302681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 27687579 - 27687546
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaa 27687546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 29362767 - 29362730
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  29362767 aaatgagaaatgatatttgtacaatcaatttatgacaa 29362730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 30439250 - 30439283
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||||    
T  30439250 gagaaatgatatttgtacaaccaatttatgacaa 30439283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 31428028 - 31427995
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  31428028 gagaaatgatatttgtacaaccactttgtgacaa 31427995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 39669806 - 39669839
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  39669806 gagaaatgatatttgtacaaccattttgtgacaa 39669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 40596114 - 40596081
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaa 40596081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 40612114 - 40612147
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  40612114 gagaaatgatatttgtacaaccattttgtgacaa 40612147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 42256460 - 42256493
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaa 42256493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 45740615 - 45740582
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaa 45740582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 48325838 - 48325805
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  48325838 gagaaatgatatttgtacaaccattttgtgacaa 48325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 49425738 - 49425771
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  49425738 gagaaatgatatttgtacaaccactttgtgacaa 49425771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 49453491 - 49453524
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  49453491 gagaaatgatatttgtacaaccactttgtgacaa 49453524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 50226950 - 50226917
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  50226950 gagaaatgatatttgtacaaccactttgtgacaa 50226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 3606167 - 3606139
Alignment:
Q  181 atgagaaatgatatttgtacaaccaattt 209  Q
    |||||||||||||||||||||||||||||    
T  3606167 atgagaaatgatatttgtacaaccaattt 3606139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3797896 - 3797844
Alignment:
Q  17 acatataacaatggatatccttaacaactaagttatgctcatggggacgaata 69  Q
    ||||||||  ||| ||||||||| ||||| ||||||||||| |||||||||||    
T  3797896 acatataattatgcatatccttaccaactgagttatgctcacggggacgaata 3797844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 12990546 - 12990518
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaacca 205  Q
    |||||||||||||||||||||||||||||    
T  12990546 aaaaatgagaaatgatatttgtacaacca 12990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 16836178 - 16836142
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| || ||||||||||    
T  16836178 aatgagaaatgatatttgtacaatcattttgtgacaa 16836142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 25098862 - 25098826
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  25098862 aatgagaaatgatatttgtacaaccactttgtaacaa 25098826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 30687049 - 30687085
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| || |||||||    
T  30687049 aatgagaaatgatatttgtacaaccatttagtgacaa 30687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 32966268 - 32966300
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||||||||||    
T  32966268 agaaatgatatttgtacaaccactttgtgacaa 32966300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 36231776 - 36231744
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||||||||||    
T  36231776 agaaatgatatttgtacaaccattttgtgacaa 36231744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 49020481 - 49020453
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaacca 205  Q
    |||||||||||||||||||||||||||||    
T  49020481 aaaaatgagaaatgatatttgtacaacca 49020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 20288527 - 20288566
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  20288527 aaaaaagagaaatgatatttgtacaaccaatttgtgacaa 20288566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 21075156 - 21075195
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21075156 aaaaaagagaaatgatatttgtacaaccaatttgtgacaa 21075195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 1065417 - 1065450
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  1065417 gagaaatgatatttgtacaaccaatttgtgacaa 1065450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 30928002 - 30927969
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  30928002 gagaaatgatatttgtacaaccaatttgtgacaa 30927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 21273784 - 21273748
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21273784 aatgagaaatgatatttgtacaaccattttgtgacaa 21273748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 216
Target Start/End: Complemental strand, 21649000 - 21648969
Alignment:
Q  185 gaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||    
T  21649000 gaaatgatatttgtacaaccaatttgtgacaa 21648969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 24795375 - 24795434
Alignment:
Q  296 taaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||| || || || |||||||||||||  |||||||||||||||||||| |||||||    
T  24795375 taaatttatggttgtctcataagttgtcaaacaaatagttgttcaaataacatacctctt 24795434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 38844863 - 38844828
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  38844863 atgagaaatgatatttgtacaaccattttgtgacaa 38844828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 43873764 - 43873729
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43873764 atgagaaatgatatttgtacaaccattttgtgacaa 43873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 1796495 - 1796529
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  1796495 tgagaaatgatatttgtacaaccactttgtgacaa 1796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 7596967 - 7596929
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  7596967 aaaatgagaaatgatatttgtacaatcactttgtgacaa 7596929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 28927676 - 28927714
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  28927676 aaaaagagaaatgatatttgtacaaccactttgtgacaa 28927714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 45101391 - 45101429
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  45101391 aaaaagagaaatgatatttgtacaaccactttgtgacaa 45101429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 5502371 - 5502404
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  5502371 gagaaatgatatttgtacaaccactttgtgacaa 5502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 10644750 - 10644689
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| || || ||| |||||||||| |  |||| |||||||||||||||||||||    
T  10644750 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 10644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12732842 - 12732875
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  12732842 gagaaatgatatttgtacaaccactttgtgacaa 12732875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 22852910 - 22852877
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  22852910 gagaaatgatatttgtacaaccactttgtgacaa 22852877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41273515 - 41273548
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  41273515 gagaaatgatatttgtacaaacaatttgtgacaa 41273548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 41293792 - 41293759
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||| |||||||||||||||||||    
T  41293792 gagaaatgatatttttacaaccaatttgtgacaa 41293759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 43419879 - 43419912
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  43419879 gagaaatgatatttgtacaactaatttgtgacaa 43419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 44380685 - 44380652
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  44380685 gagaaatgatatttgtacaaccattttgtgacaa 44380652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 3650113 - 3650141
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgt 211  Q
    |||||||||||||||||||||||||||||    
T  3650113 gagaaatgatatttgtacaaccaatttgt 3650141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 6445301 - 6445365
Alignment:
Q  291 ttttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||| || || || |||||||||||||  |||| || |||||||||||||| |||||    
T  6445301 ttttgtaaatttatggttgtcccataagttgtcaatcaaatggtcgttcaaataacacatctctt 6445365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 348
Target Start/End: Complemental strand, 7472952 - 7472920
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||| |||||||||||||||||||||    
T  7472952 aagttgtcaaccaaatagttgttcaaataacac 7472920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 10553165 - 10553121
Alignment:
Q  172 tattcaaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| ||| ||||||||||||||||||||||||| ||| ||||||    
T  10553165 tatttaaacatgagaaatgatatttgtacaaccactttctgacaa 10553121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 304 - 348
Target Start/End: Complemental strand, 14707280 - 14707236
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||| || ||||||||||| || |||||||||||||||||||||    
T  14707280 tgattgtctcataagttgtccaccaaatagttgttcaaataacac 14707236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 27300340 - 27300368
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaacca 205  Q
    |||||||||||||||||||||||||||||    
T  27300340 aaaaatgagaaatgatatttgtacaacca 27300368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 30943912 - 30943884
Alignment:
Q  181 atgagaaatgatatttgtacaaccaattt 209  Q
    |||||||||||||||||||||||||||||    
T  30943912 atgagaaatgatatttgtacaaccaattt 30943884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 39719318 - 39719286
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||| |||||||||||||    
T  39719318 agaaatgatatttgtacaatcaatttgtgacaa 39719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 7037557 - 7037522
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  7037557 atgagaaatgatatttgtacaaccaatttgtgacaa 7037522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 27371263 - 27371326
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||||||| || || || |||||||| |||| ||||| |||||||||||||||||||||||    
T  27371263 tttgtaaatttatggttgtctcataagttctcaaataaattgttgttcaaataacacacctctt 27371326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 9032775 - 9032813
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9032775 aaaatgagaaatgatatttgtacaatcaatttgtgacaa 9032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 39241362 - 39241328
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  39241362 tgagaaatgatatttgtacaaccaatttgtgacaa 39241328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 1796366 - 1796399
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  1796366 gagaaatgatatttgtacaaccaatttgtgacaa 1796399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 5208398 - 5208365
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  5208398 gagaaatgatatttgtacaaccaatttgtgacaa 5208365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 27001480 - 27001447
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  27001480 gagaaatgatatttgtacaaccaatttgtgacaa 27001447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 51377364 - 51377331
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  51377364 gagaaatgatatttgtacaaccaatttgtgacaa 51377331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 51717353 - 51717320
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  51717353 gagaaatgatatttgtacaaccaatttgtgacaa 51717320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 55268072 - 55268039
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  55268072 gagaaatgatatttgtacaaccaatttgtgacaa 55268039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 21172414 - 21172458
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    |||||||| ||||| || |||||||||||||||||||||||||||    
T  21172414 tgattatcccataaattatcaactaaatagttgttcaaataacac 21172458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 6370978 - 6371013
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  6370978 atgagaaatgatatttgtacaaccactttgtgacaa 6371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 30042132 - 30042167
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30042132 atgagaaatgatatttgtacaaccattttgtgacaa 30042167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 32365729 - 32365694
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32365729 atgagaaatgatatttgtacaaccattttgtgacaa 32365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 33438043 - 33438078
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33438043 atgagaaatgatatttgtaaaaccaatttgtgacaa 33438078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 37547063 - 37547098
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  37547063 atgagaaatgatatttgtacaaccactttgtgacaa 37547098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 11997684 - 11997718
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  11997684 tgagaaatgatatttgtacaaccactttgtgacaa 11997718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 15596395 - 15596429
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  15596395 tgagaaatgatatttgtacaaccactttgtgacaa 15596429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 23662265 - 23662211
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataac 346  Q
    ||||||||||| || |||||| |||| ||||||| ||||| ||||||||||||||    
T  23662265 tttgtaaatttatggttatcaaataaattgtcaattaaatggttgttcaaataac 23662211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 26885290 - 26885324
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  26885290 tgagaaatgatatttgtacaaccactttgtgacaa 26885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 30778325 - 30778291
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| ||||||||||||||    
T  30778325 tgagaaatgatatttgtacagccaatttgtgacaa 30778291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 39010209 - 39010175
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  39010209 tgagaaatgatatttgtacaaccattttgtgacaa 39010175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 44368278 - 44368240
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  44368278 aaaaagagaaatgatatttgtacaatcaatttgtgacaa 44368240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 46038785 - 46038840
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    ||||||||||| ||||||||| | |||||||||  |||||| ||||||||||||||||    
T  46038785 tttgtaaatttatgattatcataaaagttgtca--taaataattgttcaaataacaca 46038840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 169573 - 169540
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaa 169540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 1815932 - 1815887
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||    
T  1815932 tcacataagttgtcaaccagatggttgttcaaataacactcctctt 1815887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 3222989 - 3223022
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  3222989 gagaaatgatatttgtacaatcaatttgtgacaa 3223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 4100831 - 4100794
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgaca 215  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  4100831 aaaatgagaaatgatatttgttcaaccattttgtgaca 4100794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 4896571 - 4896538
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  4896571 gagaaatgatatttgtacaaccactttgtgacaa 4896538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 10994223 - 10994190
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  10994223 gagaaatgatatttgtacaaccattttgtgacaa 10994190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 11064160 - 11064127
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaa 11064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 13267549 - 13267516
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  13267549 gagaaatgatatttgtacaaccattttgtgacaa 13267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24235320 - 24235353
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  24235320 gagaaatgatatttgtacaatcaatttgtgacaa 24235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 26440676 - 26440709
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  26440676 gagaaatgatatttgtacaaccactttgtgacaa 26440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 31221413 - 31221446
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  31221413 gagaaatgatatttgtacaatcaatttgtgacaa 31221446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 31240645 - 31240678
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtga 213  Q
    |||||||||||||||||||||||||| |||||||    
T  31240645 aatgagaaatgatatttgtacaaccactttgtga 31240678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 32696715 - 32696674
Alignment:
Q  314 ataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||| |||||||| |||| |||||||||||||||||||||||    
T  32696715 ataaattgtcaaccaaatggttgttcaaataacacacctctt 32696674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34116611 - 34116578
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  34116611 gagaaatgatatttgtacaaccactttgtgacaa 34116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 34259815 - 34259848
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  34259815 gagaaatgatatttgtacaaccattttgtgacaa 34259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 41119541 - 41119508
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  41119541 gagaaatgatatttgtacaaccactttgtgacaa 41119508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 42815527 - 42815588
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| || || ||| |||||||||| |  |||| |||||||||||||||||||||    
T  42815527 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 42815588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 43168785 - 43168752
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  43168785 gagaaatgatatttgtacaaccattttgtgacaa 43168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 46173550 - 46173583
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  46173550 gagaaatgatatttgtacaaccactttgtgacaa 46173583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 51039191 - 51039154
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  51039191 aaatgagaaatgatatttgtacaactactttgtgacaa 51039154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 51359861 - 51359828
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  51359861 gagaaatgatatttgtacaaccattttgtgacaa 51359828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 52846151 - 52846110
Alignment:
Q  319 ttgtcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  52846151 ttgtcaatcaaatagttgttcaaataacacccctcttaaaaa 52846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 54036589 - 54036556
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaa 54036556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 4949648 - 4949684
Alignment:
Q  313 cataagttgtcaactaaa-tagttgttcaaataacac 348  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4949648 cataagttgtcaactaaattagttgttcaaataacac 4949684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 356
Target Start/End: Complemental strand, 24509300 - 24509272
Alignment:
Q  328 aaatagttgttcaaataacacacctctta 356  Q
    |||||||||||||||||||||||||||||    
T  24509300 aaatagttgttcaaataacacacctctta 24509272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 28676211 - 28676179
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaa 28676179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 360
Target Start/End: Original strand, 33423461 - 33423529
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    ||||||||||| || |||||| |||||||||| |  |||| ||||| ||||||||||| ||||| ||||    
T  33423461 tttgtaaatttatggttatcaaataagttgtccataaaatggttgtgcaaataacacatctctttaaaa 33423529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 353
Target Start/End: Original strand, 43769854 - 43769894
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    |||||||| ||||| ||||||||||||||||||||| ||||    
T  43769854 cataagttatcaacaaaatagttgttcaaataacactcctc 43769894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 47744425 - 47744393
Alignment:
Q  328 aaatagttgttcaaataacacacctcttaaaaa 360  Q
    |||||||||||||||||||||| ||||||||||    
T  47744425 aaatagttgttcaaataacacaactcttaaaaa 47744393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 51389148 - 51389112
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  51389148 aatgagaaatgatatttgtacaaccactttgtaacaa 51389112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 25801875 - 25801840
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||||    
T  25801875 atgagaaatgatatttgtacaaccaatttgtgacaa 25801840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 30487541 - 30487507
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||||||||||    
T  30487541 tgagaaatgatatttgtacaaccaatttgtgacaa 30487507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 30856802 - 30856840
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  30856802 aaaatgagaaatgatatttgtacaaccactttgtgacaa 30856840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34144622 - 34144589
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  34144622 gagaaatgatatttgtacaaccaatttgtgacaa 34144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 37966367 - 37966400
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  37966367 gagaaatgatatttgtacaaccaatttgtgacaa 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 4344446 - 4344482
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4344446 aatgagaaatgatatttgtacaaccattttgtgacaa 4344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 37105778 - 37105830
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaaata 362  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||| |||| ||||    
T  37105778 tcacaaaagttgtcaaccaaatagttgttcaaataacactccttttaagaata 37105830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 36132968 - 36133007
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  36132968 aaaaaagagaaatgatatttgtacaaccactttgtgacaa 36133007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 41586596 - 41586561
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41586596 cataagttgtcaactaaatggttgttcaaataacac 41586561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 2221130 - 2221176
Alignment:
Q  307 ttatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    |||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  2221130 ttatcacataagttgtcaacaaaattattgttcaaataacactcctc 2221176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 3012780 - 3012738
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||||| |||| |||||||||||||||| ||||||    
T  3012780 cataagttgtcaaccaaatggttgttcaaataacactcctctt 3012738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 4738648 - 4738610
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  4738648 aaaaagagaaatgatatttgtacaaccactttgtgacaa 4738610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 5054748 - 5054786
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacac 348  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  5054748 tcacataagttgtcaaccaaatagttattcaaataacac 5054786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 9377599 - 9377633
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataaca 347  Q
    ||||||||||||||||||| |||||||||||||||    
T  9377599 cataagttgtcaactaaatggttgttcaaataaca 9377633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 23352835 - 23352793
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||||| |||| |||||||||||||||| ||||||    
T  23352835 cataagttgtcaaccaaatggttgttcaaataacactcctctt 23352793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 27307307 - 27307269
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  27307307 aaaaagagaaatgatatttgtacaatcaatttgtgacaa 27307269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 2308393 - 2308360
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||||    
T  2308393 gagaaatgatatttgtacaaccaatttttgacaa 2308360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3196158 - 3196125
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaa 3196125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 4138326 - 4138293
Alignment:
Q  315 taagttgtcaactaaatagttgttcaaataacac 348  Q
    |||||||||||| |||||||||||||||||||||    
T  4138326 taagttgtcaaccaaatagttgttcaaataacac 4138293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 5167813 - 5167780
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  5167813 gagaaatgatatttgtacaaccactttgtgacaa 5167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 6365186 - 6365219
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  6365186 gagaaatgatatttgtacaaccactttgtgacaa 6365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 10216972 - 10217029
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    |||||||| || ||||||||  |||||||||||| ||||| |||||| ||||||||||    
T  10216972 tttgtaaaattatgattatcctataagttgtcaattaaattgttgtttaaataacaca 10217029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 10687941 - 10687974
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  10687941 gagaaatgatatttgtacaaacaatttgtgacaa 10687974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 12600045 - 12600078
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtga 213  Q
    |||||||||||||||||||||||||| |||||||    
T  12600045 aatgagaaatgatatttgtacaaccactttgtga 12600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 14140408 - 14140375
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  14140408 gagaaatgatatttgtacaactaatttgtgacaa 14140375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 15283321 - 15283288
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  15283321 gagaaatgatatttgtacaaccactttgtgacaa 15283288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 29795447 - 29795480
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaa 29795480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 31296916 - 31296883
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  31296916 gagaaatgatatttgtacaaccattttgtgacaa 31296883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 33296142 - 33296109
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  33296142 gagaaatgatatttgtacaaccactttgtgacaa 33296109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 34134719 - 34134658
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||||||| || || ||| |||||||||| |  |||| |||||||||||||||||||||    
T  34134719 tttgtaaatttatggttgtcaaataagttgtctatcaaatggttgttcaaataacacacctc 34134658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 35171297 - 35171264
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  35171297 gagaaatgatatttgtacaaccattttgtgacaa 35171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 35792703 - 35792666
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  35792703 aaatgagaaatgatatttgtacaaccattttgttacaa 35792666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 36435681 - 36435714
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaa 36435714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 36909914 - 36909881
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  36909914 gagaaatgatatttgtacaaccattttgtgacaa 36909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 39147887 - 39147956
Alignment:
Q  291 ttttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    |||||||||||| ||||| || || |||||||||   |||| ||||||||||||||||| ||| ||||||    
T  39147887 ttttgtaaatttatgattgtcccaaaagttgtcattaaaatggttgttcaaataacacatctcataaaaa 39147956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 41040266 - 41040299
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  41040266 gagaaatgatatttgtacaaccactttgtgacaa 41040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 42283310 - 42283277
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  42283310 gagaaatgatatttgtacaaccactttgtgacaa 42283277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 5096030 - 5095994
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtga 213  Q
    |||||||||||||||||||||||||| || |||||||    
T  5096030 aaaaatgagaaatgatatttgtacaatcattttgtga 5095994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 21490700 - 21490736
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| | ||||||||||    
T  21490700 aatgagaaatgatatttgtacaactactttgtgacaa 21490736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 24562942 - 24562902
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  24562942 aagttgtcaaccaaatggttgttcaaataacactcctctta 24562902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 36582260 - 36582292
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| |||||||||||    
T  36582260 agaaatgatatttgtacaacccatttgtgacaa 36582292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 38246821 - 38246789
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||| |||||||||||||    
T  38246821 agaaatgatatttgtacaatcaatttgtgacaa 38246789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 12078 - 12119
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctcttaa 357  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  12078 aagttgtcaaccaaatagttgttcaaataacactcctcttaa 12119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000008; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 2056783 - 2056816
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  2056783 gagaaatgatatttgtacaaccaatttgtgacaa 2056816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 3552104 - 3552047
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    ||||||||||| ||||||||||| ||||| ||| | |||| |||||||||||||||||    
T  3552104 tttgtaaatttatgattatcacaaaagttatcatccaaatggttgttcaaataacaca 3552047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 3660428 - 3660391
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  3660428 aaatgagaaattatatttgtacaaccaatttgtgacaa 3660391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 9954548 - 9954581
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  9954548 gagaaatgatatttgtacaaccaatttgtgacaa 9954581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 2163700 - 2163735
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| |||||||||||||    
T  2163700 atgagaaatgatatttgtacaatcaatttgtgacaa 2163735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 2175333 - 2175368
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| |||||||||||||    
T  2175333 atgagaaatgatatttgtacaatcaatttgtgacaa 2175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 359
Target Start/End: Original strand, 4820489 - 4820556
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctcttaaaa 359  Q
    |||||||| || ||||| || || ||||| |||  ||||||||||||||||||||||| |||||||||    
T  4820489 tttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactcttaaaa 4820556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 32457325 - 32457290
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32457325 atgagaaatgatatttgtacaaccactttgtgacaa 32457290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 348
Target Start/End: Original strand, 34037105 - 34037144
Alignment:
Q  310 tcacataagttgtcaactaaa-tagttgttcaaataacac 348  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  34037105 tcacataagttgtcaactaaattagttgttcaaataacac 34037144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 6435031 - 6435069
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  6435031 aaaattagaaatgatatttgtacaaccactttgtgacaa 6435069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 754360 - 754319
Alignment:
Q  319 ttgtcaactaaatagttgttcaaataacacacctcttaaaaa 360  Q
    |||||||| |||| |||||||||||||||| |||||||||||    
T  754360 ttgtcaaccaaatggttgttcaaataacactcctcttaaaaa 754319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3339570 - 3339537
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaa 3339537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 11785355 - 11785388
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  11785355 gagaaatgatatttgtacaaccattttgtgacaa 11785388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 29376790 - 29376753
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  29376790 aaatgagaaatgatatttttacaaccattttgtgacaa 29376753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 30796146 - 30796113
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  30796146 gagaaatgatatttgtacaaccactttgtgacaa 30796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 18141232 - 18141188
Alignment:
Q  310 tcacataagttgtcaactaaatagttgttcaaataacacacctct 354  Q
    ||||| ||||||||||| |||| |||||||||||||||| |||||    
T  18141232 tcacaaaagttgtcaaccaaatggttgttcaaataacactcctct 18141188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 35213486 - 35213446
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  35213486 aagttgtcaaccaaatggttgttcaaataacactcctctta 35213446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3069645 - 3069612
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  3069645 gagaaatgatatttgtacaaccaatttgtgacaa 3069612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 20714243 - 20714276
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  20714243 gagaaatgatatttgtacaaccaatttgtgacaa 20714276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 32931989 - 32931956
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  32931989 gagaaatgatatttgtacaaccaatttgtgacaa 32931956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 36818956 - 36818989
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||||||||    
T  36818956 gagaaatgatatttgtacaaccaatttgtgacaa 36818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 462475 - 462439
Alignment:
Q  180 aatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||||| ||||||||||    
T  462475 aatgagaaatgatatttgtacaaccattttgtgacaa 462439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 1902003 - 1901964
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  1902003 aaaaaagagaaatgatatttgtacaaccactttgtgacaa 1901964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 1911449 - 1911410
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  1911449 aaaaaagagaaatgatatttgtacaaccactttgtgacaa 1911410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 4140652 - 4140613
Alignment:
Q  176 caaaaatgagaaatgatatttgtacaaccaatttgtgaca 215  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  4140652 caaaaaagagaaatgatatttgaacaaccaatttgtgaca 4140613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 5398912 - 5398951
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  5398912 aaaaaagagaaatgatatttgtacaaccactttgtgacaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 9719518 - 9719479
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  9719518 aaaaatgagaaatgatatttgtacaaccactttttgacaa 9719479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 11327106 - 11327141
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11327106 atgagaaatgatatttgtacaaccattttgtgacaa 11327141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 23163230 - 23163195
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23163230 atgagaaatcatatttgtacaaccaatttgtgacaa 23163195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 37411018 - 37411061
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    |||| |||||||||||||| |||||||||||||||| |||||||    
T  37411018 cataggttgtcaactaaatggttgttcaaataacactcctctta 37411061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Complemental strand, 50206895 - 50206856
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  50206895 aagttgtcaactaaatagttgtttaaataacactcctctt 50206856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 6999313 - 6999355
Alignment:
Q  313 cataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||||| |||| |||||||||||||||| ||||||    
T  6999313 cataagttgtcaaccaaatggttgttcaaataacactcctctt 6999355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 14957835 - 14957869
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  14957835 tgagaaatgatatttgtacaaccactttgtgacaa 14957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 20380961 - 20380927
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  20380961 tgagaaatgatatttgtacaaccactttgtgacaa 20380927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 28263551 - 28263581
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtga 213  Q
    |||||||||||||||||||||||||||||||    
T  28263551 gagaaatgatatttgtacaaccaatttgtga 28263581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 51464344 - 51464310
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||||| ||||||||||    
T  51464344 tgagaaatgatatttgtacaaccactttgtgacaa 51464310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 52454170 - 52454132
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  52454170 aaaaagagaaatgatatttgtacaatcaatttgtgacaa 52454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 108431 - 108464
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  108431 gagaaatgatatttgtacaaccactttgtgacaa 108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 346526 - 346485
Alignment:
Q  307 ttatcacataagttgtcaactaaa-tagttgttcaaataaca 347  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  346526 ttatcacataagttgtcaactaaattaattgttcaaataaca 346485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 3958089 - 3958056
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  3958089 gagaaatgatatttgtacaatcaatttgtgacaa 3958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 8254027 - 8254060
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaa 8254060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 9158804 - 9158759
Alignment:
Q  310 tcacataagttgtcaactaaat-agttgttcaaataacacacctct 354  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||    
T  9158804 tcacataagttgtcaaccaaattagttgttcaaataacactcctct 9158759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12792638 - 12792671
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  12792638 gagaaatgatatttgtacaaccactttgtgacaa 12792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 16295462 - 16295491
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttg 210  Q
    ||||||||||||||||||||||||||||||    
T  16295462 atgagaaatgatatttgtacaaccaatttg 16295491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 18169157 - 18169190
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  18169157 gagaaatgatatttgtacaaccactttgtgacaa 18169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19418232 - 19418195
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  19418232 aaatgagaaatgatatttgtacaaccattttatgacaa 19418195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 20215948 - 20215981
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  20215948 gagaaatgatatttgtacaaccactttgtgacaa 20215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 23155387 - 23155330
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacaca 349  Q
    |||||||| || ||||||||  | ||||| |||| |||||||||||||||||||||||    
T  23155387 tttgtaaaattatgattatcttaaaagttatcaattaaatagttgttcaaataacaca 23155330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 29030739 - 29030694
Alignment:
Q  308 tatcacataagttgtcaactaaatagttgttcaaataacacacctc 353  Q
    ||||||| |||||||||   ||||||||||||||||||||||||||    
T  29030739 tatcacaaaagttgtcactcaaatagttgttcaaataacacacctc 29030694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 30400227 - 30400194
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  30400227 gagaaatgatatttgtacaacaaatttgtgacaa 30400194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34021534 - 34021501
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||| |||||||||||||    
T  34021534 gagaaatgatatttgtacaatcaatttgtgacaa 34021501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34607991 - 34607958
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  34607991 gagaaatgatatttgtacaaccactttgtgacaa 34607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 35272027 - 35272060
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  35272027 gagaaatgatatttgtacaaccactttgtgacaa 35272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 35376622 - 35376589
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  35376622 gagaaatgatatttgtacaaccattttgtgacaa 35376589  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 38944212 - 38944179
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||| ||||||||||||    
T  38944212 gagaaatgatatttgtacaactaatttgtgacaa 38944179  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 42643233 - 42643262
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttg 210  Q
    ||||||||||||||||||||||||||||||    
T  42643233 atgagaaatgatatttgtacaaccaatttg 42643262  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 43169813 - 43169780
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaa 43169780  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 43460377 - 43460414
Alignment:
Q  179 aaatgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  43460377 aaatgagaaatgatattcgtacaaccattttgtgacaa 43460414  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 47683801 - 47683834
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaa 47683834  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 48405410 - 48405443
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaa 48405443  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 48945847 - 48945880
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  48945847 gagaaatgatatttgtacaaccactttgtgacaa 48945880  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 49196696 - 49196729
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaa 49196729  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 51343548 - 51343604
Alignment:
Q  310 tcacataagttgtcaactaaa-tagttgttcaaataacacacctcttaaaaatattat 366  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||| ||||||| |||||    
T  51343548 tcacataagttgtcaactaaattagttgtttaaataacactcct-ttaaaaaaattat 51343604  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 52564705 - 52564672
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  52564705 gagaaatgatatttgtacaaccattttgtgacaa 52564672  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 53932462 - 53932429
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  53932462 gagaaatgatatttgtacaaccattttgtgacaa 53932429  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 1295326 - 1295362
Alignment:
Q  177 aaaaatgagaaatgatatttgtacaaccaatttgtga 213  Q
    ||||||||||||||||||||||||||| | |||||||    
T  1295326 aaaaatgagaaatgatatttgtacaactattttgtga 1295362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 35377030 - 35376966
Alignment:
Q  292 tttgtaaatttctgattatcacataagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    |||||||| || || || ||||| ||||||||| |||||| | ||||||||||||||| ||||||    
T  35377030 tttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctta 35376966  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 41877682 - 41877650
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgaca 215  Q
    ||||||||||||||||||||||| |||||||||    
T  41877682 gagaaatgatatttgtacaaccactttgtgaca 41877650  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 46574085 - 46574117
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtga 213  Q
    ||||||||||||||||||||||||| |||||||    
T  46574085 atgagaaatgatatttgtacaaccattttgtga 46574117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 47101523 - 47101555
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||||||||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaa 47101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 55400145 - 55400185
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctctta 356  Q
    ||||||||||| |||| |||||||||||||||| |||||||    
T  55400145 aagttgtcaaccaaatggttgttcaaataacactcctctta 55400185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 11098 - 11149
Alignment:
Q  304 tgattatcacataagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    ||||| ||||||||||||||||| |||  |||||||||||||||| ||||||    
T  11098 tgattgtcacataagttgtcaaccaaaaggttgttcaaataacactcctctt 11149  T

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Target: scaffold0286 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 18709 - 18674
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| |||||||||||||    
T  18709 atgagaaatgatatttgtacaatcaatttgtgacaa 18674  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 355
Target Start/End: Original strand, 38571 - 38610
Alignment:
Q  316 aagttgtcaactaaatagttgttcaaataacacacctctt 355  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  38571 aagttgtcaactaaatggttgttcaaataacactcctctt 38610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 113623 - 113658
Alignment:
Q  181 atgagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||||| ||||||||||    
T  113623 atgagaaatgatatttgtacaaccactttgtgacaa 113658  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 18594 - 18625
Alignment:
Q  182 tgagaaatgatatttgtacaaccaatttgtga 213  Q
    ||||||||||||||||||||||||||||||||    
T  18594 tgagaaatgatatttgtacaaccaatttgtga 18625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 219735 - 219702
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||||||||| ||||||||||    
T  219735 gagaaatgatatttgtacaaccactttgtgacaa 219702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 88808 - 88838
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtga 213  Q
    |||||||||||||||||||||||||||||||    
T  88808 gagaaatgatatttgtacaaccaatttgtga 88838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 1567 - 1534
Alignment:
Q  183 gagaaatgatatttgtacaaccaatttgtgacaa 216  Q
    ||||||||||||||||| ||||||||||||||||    
T  1567 gagaaatgatatttgtataaccaatttgtgacaa 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 905 - 937
Alignment:
Q  178 aaaatgagaaatgatatttgtacaaccaatttg 210  Q
    |||| ||||||||||||||||||||||||||||    
T  905 aaaaagagaaatgatatttgtacaaccaatttg 937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 15604 - 15572
Alignment:
Q  184 agaaatgatatttgtacaaccaatttgtgacaa 216  Q
    |||||||||||||||||||||| ||||||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaa 15572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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