View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20966_low_18 (Length: 333)

Name: NF20966_low_18
Description: NF20966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20966_low_18
NF20966_low_18
[»] chr4 (79 HSPs)
chr4 (1-327)||(1105416-1105741)
chr4 (28-303)||(5128762-5129038)
chr4 (16-272)||(37514557-37514815)
chr4 (17-303)||(32915297-32915571)
chr4 (103-308)||(47128972-47129177)
chr4 (107-303)||(34027568-34027764)
chr4 (103-301)||(34768498-34768696)
chr4 (111-293)||(43455463-43455645)
chr4 (112-303)||(54780771-54780964)
chr4 (103-295)||(10978885-10979080)
chr4 (107-303)||(32128573-32128770)
chr4 (103-298)||(38209517-38209713)
chr4 (107-291)||(37777156-37777341)
chr4 (115-293)||(2790673-2790851)
chr4 (103-303)||(48209225-48209432)
chr4 (103-303)||(10428120-10428327)
chr4 (107-291)||(54083176-54083360)
chr4 (107-303)||(16845010-16845206)
chr4 (107-295)||(35465096-35465283)
chr4 (107-293)||(19498493-19498677)
chr4 (103-217)||(13460192-13460306)
chr4 (107-303)||(35779249-35779443)
chr4 (150-295)||(17679432-17679577)
chr4 (107-303)||(16882317-16882513)
chr4 (107-293)||(40089505-40089700)
chr4 (107-293)||(38352197-38352373)
chr4 (146-299)||(51964736-51964892)
chr4 (103-303)||(55255254-55255443)
chr4 (103-177)||(23509846-23509920)
chr4 (16-83)||(10431442-10431509)
chr4 (17-82)||(55255080-55255145)
chr4 (17-83)||(47127981-47128047)
chr4 (23-83)||(17679223-17679283)
chr4 (28-83)||(48208461-48208516)
chr4 (29-83)||(45560704-45560758)
chr4 (145-303)||(16922249-16922409)
chr4 (33-82)||(38209842-38209891)
chr4 (130-218)||(36178684-36178772)
chr4 (162-308)||(9578574-9578728)
chr4 (28-83)||(13459795-13459850)
chr4 (124-206)||(4167910-4167992)
chr4 (107-169)||(24969426-24969488)
chr4 (124-218)||(36118465-36118559)
chr4 (133-227)||(51691913-51692009)
chr4 (172-302)||(23508432-23508564)
chr4 (36-83)||(9579469-9579516)
chr4 (36-83)||(9585164-9585211)
chr4 (28-83)||(27596639-27596694)
chr4 (124-218)||(27112036-27112130)
chr4 (33-83)||(34769533-34769583)
chr4 (252-308)||(13460305-13460361)
chr4 (237-308)||(24969716-24969787)
chr4 (147-218)||(39655261-39655332)
chr4 (124-292)||(52468292-52468459)
chr4 (162-215)||(2135331-2135384)
chr4 (30-83)||(35780556-35780609)
chr4 (124-213)||(40217238-40217327)
chr4 (28-76)||(54779452-54779500)
chr4 (170-217)||(15735142-15735189)
chr4 (28-83)||(24969253-24969308)
chr4 (124-218)||(37744916-37745011)
chr4 (124-218)||(10042007-10042101)
chr4 (29-83)||(16844839-16844893)
chr4 (29-83)||(37777459-37777513)
chr4 (28-69)||(32128403-32128444)
chr4 (23-83)||(54083478-54083538)
chr4 (26-69)||(2790988-2791031)
chr4 (239-282)||(2975367-2975410)
chr4 (17-64)||(10978144-10978191)
chr4 (183-218)||(24614018-24614053)
chr4 (147-218)||(39329399-39329470)
chr4 (53-83)||(23510887-23510917)
chr4 (23-61)||(23510922-23510960)
chr4 (132-210)||(36362886-36362964)
chr4 (33-83)||(40089340-40089390)
chr4 (185-218)||(30507129-30507162)
chr4 (124-212)||(24396940-24397028)
chr4 (124-212)||(29425187-29425275)
chr4 (47-83)||(51964204-51964240)
[»] chr5 (52 HSPs)
chr5 (17-303)||(15480010-15480295)
chr5 (17-307)||(19523093-19523384)
chr5 (23-303)||(36187799-36188079)
chr5 (28-302)||(2274809-2275070)
chr5 (107-308)||(38869278-38869479)
chr5 (103-308)||(16591989-16592194)
chr5 (106-308)||(27078994-27079198)
chr5 (103-295)||(34756293-34756486)
chr5 (107-293)||(16198723-16198910)
chr5 (106-303)||(30854312-30854510)
chr5 (107-303)||(16799244-16799443)
chr5 (129-303)||(31194532-31194705)
chr5 (107-293)||(9364275-9364462)
chr5 (107-303)||(28822256-28822458)
chr5 (123-308)||(22986472-22986658)
chr5 (107-303)||(7670908-7671114)
chr5 (145-285)||(7338021-7338162)
chr5 (107-293)||(27924066-27924253)
chr5 (107-218)||(40389541-40389652)
chr5 (121-263)||(23284022-23284164)
chr5 (129-308)||(31881347-31881527)
chr5 (16-83)||(31881590-31881657)
chr5 (28-82)||(34756615-34756669)
chr5 (124-218)||(1366531-1366625)
chr5 (124-218)||(33037781-33037875)
chr5 (129-218)||(36868881-36868970)
chr5 (17-83)||(16592845-16592911)
chr5 (17-83)||(30853266-30853332)
chr5 (32-80)||(22987470-22987518)
chr5 (236-303)||(23283947-23284014)
chr5 (242-293)||(40389467-40389518)
chr5 (124-218)||(2530902-2530996)
chr5 (124-218)||(14318390-14318484)
chr5 (129-218)||(2024647-2024736)
chr5 (129-218)||(26718954-26719043)
chr5 (129-218)||(26988698-26988787)
chr5 (124-218)||(34425904-34425998)
chr5 (129-218)||(10407467-10407556)
chr5 (30-83)||(31194767-31194820)
chr5 (28-83)||(16199026-16199081)
chr5 (124-218)||(2412089-2412183)
chr5 (169-218)||(22648741-22648790)
chr5 (129-218)||(24395745-24395834)
chr5 (23-83)||(27923891-27923951)
chr5 (183-218)||(606214-606249)
chr5 (132-218)||(10543682-10543768)
chr5 (124-218)||(11242323-11242417)
chr5 (29-83)||(16799556-16799610)
chr5 (160-218)||(17344993-17345051)
chr5 (29-83)||(38869593-38869647)
chr5 (29-65)||(8433593-8433629)
chr5 (160-204)||(41911636-41911680)
[»] chr1 (53 HSPs)
chr1 (17-303)||(14146205-14146491)
chr1 (17-282)||(41697080-41697345)
chr1 (29-301)||(16139972-16140244)
chr1 (28-303)||(6771707-6771985)
chr1 (29-300)||(3406335-3406607)
chr1 (29-300)||(3440213-3440485)
chr1 (103-309)||(44655732-44655938)
chr1 (103-303)||(5316671-5316871)
chr1 (107-310)||(17168951-17169154)
chr1 (107-308)||(23185422-23185623)
chr1 (107-303)||(5027544-5027742)
chr1 (106-303)||(50881424-50881620)
chr1 (107-300)||(4971543-4971736)
chr1 (107-293)||(19955712-19955898)
chr1 (107-308)||(40501706-40501908)
chr1 (23-141)||(6888475-6888593)
chr1 (145-303)||(6889644-6889801)
chr1 (145-303)||(6891490-6891647)
chr1 (133-303)||(21740856-21741029)
chr1 (107-303)||(13913402-13913600)
chr1 (110-218)||(27559635-27559743)
chr1 (107-303)||(9172944-9173141)
chr1 (107-303)||(9180926-9181123)
chr1 (107-291)||(51607374-51607558)
chr1 (107-285)||(1366819-1366996)
chr1 (147-303)||(22865382-22865538)
chr1 (103-303)||(27906650-27906839)
chr1 (17-82)||(44655539-44655604)
chr1 (29-82)||(27906949-27907002)
chr1 (236-301)||(34247151-34247216)
chr1 (124-218)||(38547043-38547137)
chr1 (124-212)||(26803960-26804045)
chr1 (28-83)||(10912094-10912149)
chr1 (124-218)||(43235775-43235871)
chr1 (129-217)||(38853539-38853627)
chr1 (107-291)||(44895647-44895827)
chr1 (28-83)||(23181722-23181777)
chr1 (29-75)||(5027982-5028028)
chr1 (164-218)||(17322630-17322684)
chr1 (124-218)||(33170771-33170865)
chr1 (124-218)||(45758506-45758600)
chr1 (17-63)||(50880568-50880614)
chr1 (23-83)||(13913716-13913776)
chr1 (23-83)||(40502024-40502084)
chr1 (28-83)||(1367111-1367166)
chr1 (28-69)||(44895478-44895519)
chr1 (28-83)||(9173255-9173310)
chr1 (124-218)||(39134729-39134824)
chr1 (29-83)||(27559459-27559513)
chr1 (140-178)||(34247068-34247106)
chr1 (15-64)||(5315792-5315841)
chr1 (29-82)||(51607674-51607727)
chr1 (17-65)||(12037589-12037637)
[»] chr3 (57 HSPs)
chr3 (16-303)||(47467581-47467868)
chr3 (17-303)||(21582668-21582956)
chr3 (14-309)||(42098695-42098991)
chr3 (16-295)||(53149244-53149524)
chr3 (102-309)||(8073255-8073461)
chr3 (103-309)||(54619119-54619326)
chr3 (103-302)||(18372462-18372665)
chr3 (103-308)||(38681010-38681216)
chr3 (107-308)||(44708464-44708665)
chr3 (107-303)||(34290558-34290755)
chr3 (103-303)||(3953819-3954019)
chr3 (103-303)||(27078490-27078692)
chr3 (103-303)||(27084287-27084489)
chr3 (107-303)||(43207161-43207356)
chr3 (103-303)||(36715946-36716148)
chr3 (107-293)||(53506815-53507003)
chr3 (107-310)||(37168354-37168558)
chr3 (119-295)||(50258554-50258731)
chr3 (107-303)||(50939156-50939352)
chr3 (129-303)||(36605974-36606148)
chr3 (107-303)||(54407077-54407276)
chr3 (107-270)||(9878643-9878806)
chr3 (17-101)||(50258716-50258800)
chr3 (17-82)||(36716276-36716341)
chr3 (17-82)||(38681348-38681413)
chr3 (28-82)||(27078819-27078873)
chr3 (28-82)||(27084616-27084670)
chr3 (28-82)||(54619454-54619508)
chr3 (18-83)||(3954852-3954917)
chr3 (103-191)||(29620423-29620511)
chr3 (29-83)||(13795199-13795253)
chr3 (245-303)||(29620368-29620426)
chr3 (124-218)||(54574835-54574929)
chr3 (33-82)||(36605862-36605911)
chr3 (236-303)||(48720433-48720500)
chr3 (142-218)||(32319163-32319239)
chr3 (28-83)||(1148354-1148409)
chr3 (17-80)||(18372033-18372095)
chr3 (162-215)||(23641329-23641382)
chr3 (15-64)||(29620618-29620667)
chr3 (151-218)||(42453435-42453502)
chr3 (107-293)||(48157126-48157302)
chr3 (141-218)||(26279563-26279640)
chr3 (26-83)||(44708291-44708348)
chr3 (129-218)||(49393099-49393187)
chr3 (147-227)||(8420353-8420433)
chr3 (28-80)||(48156953-48157005)
chr3 (124-215)||(789940-790031)
chr3 (28-83)||(9878919-9878974)
chr3 (28-83)||(34290874-34290929)
chr3 (28-83)||(43207474-43207529)
chr3 (28-83)||(53507117-53507172)
chr3 (133-218)||(25855435-25855519)
chr3 (129-218)||(28689369-28689458)
chr3 (23-83)||(50939468-50939528)
chr3 (28-83)||(8074087-8074142)
chr3 (130-218)||(52374666-52374754)
[»] chr7 (46 HSPs)
chr7 (17-303)||(12596211-12596495)
chr7 (14-227)||(10955375-10955588)
chr7 (103-303)||(29077200-29077400)
chr7 (103-303)||(8171461-8171661)
chr7 (107-303)||(18776687-18776884)
chr7 (107-303)||(20091201-20091399)
chr7 (107-293)||(23551002-23551189)
chr7 (107-293)||(10329341-10329528)
chr7 (107-303)||(48983760-48983962)
chr7 (145-300)||(26254015-26254171)
chr7 (107-293)||(19692078-19692265)
chr7 (107-293)||(24525613-24525803)
chr7 (107-293)||(38414807-38414994)
chr7 (107-283)||(47984909-47985088)
chr7 (107-303)||(8239669-8239867)
chr7 (18-83)||(28749582-28749647)
chr7 (129-303)||(28749716-28749891)
chr7 (146-293)||(33162270-33162418)
chr7 (107-303)||(25010417-25010607)
chr7 (17-82)||(18777019-18777084)
chr7 (236-301)||(40357303-40357368)
chr7 (124-218)||(7398452-7398546)
chr7 (129-218)||(23859079-23859168)
chr7 (129-218)||(36902931-36903020)
chr7 (129-213)||(9021812-9021896)
chr7 (124-218)||(2611269-2611363)
chr7 (139-217)||(21763595-21763673)
chr7 (135-218)||(6765688-6765771)
chr7 (124-227)||(36891579-36891682)
chr7 (135-218)||(23744808-23744891)
chr7 (124-218)||(27237430-27237524)
chr7 (28-83)||(29076941-29076998)
chr7 (27-83)||(48984077-48984133)
chr7 (241-300)||(10955605-10955664)
chr7 (147-214)||(18201161-18201228)
chr7 (28-83)||(47985202-47985257)
chr7 (124-218)||(12981327-12981421)
chr7 (28-69)||(19691908-19691949)
chr7 (129-218)||(20153207-20153296)
chr7 (32-83)||(20091514-20091565)
chr7 (28-83)||(24525918-24525973)
chr7 (140-203)||(38971270-38971333)
chr7 (184-218)||(12419502-12419536)
chr7 (29-83)||(23551305-23551359)
chr7 (140-178)||(40357413-40357451)
chr7 (26-83)||(38415108-38415165)
[»] chr6 (37 HSPs)
chr6 (33-303)||(30832447-30832717)
chr6 (17-303)||(24710918-24711208)
chr6 (103-303)||(13727321-13727522)
chr6 (103-308)||(21280528-21280734)
chr6 (107-308)||(27788607-27788807)
chr6 (103-295)||(21479477-21479671)
chr6 (103-299)||(33774100-33774298)
chr6 (103-301)||(19737618-19737815)
chr6 (113-301)||(20711644-20711833)
chr6 (107-303)||(17353941-17354138)
chr6 (107-285)||(28075770-28075952)
chr6 (146-303)||(27314101-27314259)
chr6 (129-285)||(1155787-1155946)
chr6 (107-256)||(34397844-34397993)
chr6 (17-83)||(19741223-19741289)
chr6 (107-293)||(235157-235344)
chr6 (16-82)||(21479283-21479349)
chr6 (29-83)||(23070889-23070943)
chr6 (17-82)||(13727650-13727715)
chr6 (13-74)||(27314773-27314834)
chr6 (23-78)||(21280339-21280394)
chr6 (29-83)||(12083640-12083694)
chr6 (124-215)||(21183686-21183777)
chr6 (13-74)||(27579084-27579145)
chr6 (17-82)||(33773900-33773964)
chr6 (162-218)||(6159480-6159536)
chr6 (28-83)||(1156017-1156072)
chr6 (124-218)||(2477592-2477686)
chr6 (124-218)||(20611794-20611888)
chr6 (31-83)||(19986980-19987032)
chr6 (28-83)||(17353770-17353825)
chr6 (28-83)||(27788922-27788977)
chr6 (141-218)||(30121783-30121860)
chr6 (187-293)||(19987218-19987322)
chr6 (28-83)||(20711952-20712007)
chr6 (23-69)||(235473-235519)
chr6 (107-168)||(19987148-19987209)
[»] chr2 (48 HSPs)
chr2 (24-301)||(3952906-3953182)
chr2 (17-308)||(7162677-7162968)
chr2 (103-309)||(4505873-4506080)
chr2 (107-302)||(29939786-29939981)
chr2 (103-303)||(3155196-3155397)
chr2 (103-303)||(6964986-6965185)
chr2 (103-295)||(8907008-8907202)
chr2 (103-303)||(12337369-12337571)
chr2 (150-307)||(40636164-40636321)
chr2 (107-308)||(27506658-27506859)
chr2 (107-283)||(26716111-26716289)
chr2 (107-283)||(9046012-9046189)
chr2 (108-303)||(10762489-10762683)
chr2 (107-308)||(24410419-24410624)
chr2 (140-303)||(34693991-34694154)
chr2 (140-303)||(34716403-34716566)
chr2 (150-301)||(5952642-5952791)
chr2 (17-82)||(3155003-3155068)
chr2 (23-82)||(6964798-6964857)
chr2 (16-83)||(12337689-12337756)
chr2 (17-82)||(4505679-4505744)
chr2 (17-82)||(34693147-34693212)
chr2 (17-82)||(34715559-34715624)
chr2 (124-218)||(16097008-16097102)
chr2 (129-218)||(24035553-24035642)
chr2 (124-218)||(28425718-28425812)
chr2 (124-218)||(38400798-38400892)
chr2 (195-299)||(1396625-1396730)
chr2 (18-83)||(40635963-40636028)
chr2 (187-291)||(8327681-8327785)
chr2 (29-80)||(3399521-3399572)
chr2 (132-215)||(16227379-16227462)
chr2 (124-218)||(21665708-21665802)
chr2 (29-83)||(41213928-41213982)
chr2 (23-82)||(8907330-8907389)
chr2 (124-218)||(13800552-13800647)
chr2 (132-218)||(12134048-12134134)
chr2 (23-83)||(27506975-27507035)
chr2 (28-83)||(9045843-9045898)
chr2 (28-83)||(26715942-26715997)
chr2 (147-218)||(42029168-42029239)
chr2 (130-178)||(22727550-22727598)
chr2 (31-83)||(24410250-24410302)
chr2 (33-64)||(5952949-5952980)
chr2 (148-218)||(7742141-7742212)
chr2 (28-83)||(10762799-10762854)
chr2 (124-193)||(37182670-37182739)
chr2 (186-218)||(22727465-22727497)
[»] chr8 (42 HSPs)
chr8 (16-303)||(37430080-37430368)
chr8 (103-303)||(13534610-13534809)
chr8 (103-303)||(13624150-13624349)
chr8 (107-295)||(45475801-45475989)
chr8 (103-303)||(30883309-30883511)
chr8 (107-308)||(23606547-23606748)
chr8 (103-303)||(41879161-41879360)
chr8 (103-303)||(2952141-2952344)
chr8 (103-295)||(5860672-5860867)
chr8 (107-300)||(10917375-10917568)
chr8 (107-308)||(23798178-23798380)
chr8 (103-295)||(3048447-3048640)
chr8 (17-120)||(20003839-20003942)
chr8 (107-303)||(42600766-42600963)
chr8 (16-82)||(3048774-3048840)
chr8 (17-82)||(2952473-2952538)
chr8 (17-82)||(5860996-5861061)
chr8 (17-82)||(30883110-30883175)
chr8 (124-204)||(5942697-5942777)
chr8 (124-218)||(41677181-41677276)
chr8 (124-218)||(8102913-8103007)
chr8 (124-218)||(11290185-11290279)
chr8 (129-219)||(34789869-34789959)
chr8 (236-303)||(20003732-20003799)
chr8 (124-285)||(5973048-5973209)
chr8 (28-83)||(45472202-45472257)
chr8 (124-218)||(7944530-7944624)
chr8 (168-218)||(8646250-8646300)
chr8 (124-218)||(39332413-39332507)
chr8 (29-83)||(41878177-41878231)
chr8 (124-218)||(15167423-15167517)
chr8 (23-83)||(42600590-42600650)
chr8 (147-218)||(30674411-30674482)
chr8 (124-218)||(5721560-5721654)
chr8 (29-69)||(10917206-10917246)
chr8 (124-284)||(15078759-15078919)
chr8 (183-218)||(9108553-9108588)
chr8 (28-83)||(23606855-23606910)
chr8 (147-218)||(23941099-23941170)
chr8 (183-218)||(34868185-34868220)
chr8 (14-65)||(45294597-45294648)
chr8 (124-218)||(14509991-14510084)
[»] scaffold0070 (2 HSPs)
scaffold0070 (103-303)||(1323-1523)
scaffold0070 (16-83)||(1010-1077)
[»] scaffold0039 (2 HSPs)
scaffold0039 (107-303)||(106522-106719)
scaffold0039 (28-83)||(106390-106445)
[»] scaffold0001 (3 HSPs)
scaffold0001 (55-173)||(181851-181969)
scaffold0001 (169-303)||(183106-183240)
scaffold0001 (15-62)||(181433-181480)
[»] scaffold1590 (1 HSPs)
scaffold1590 (130-218)||(266-354)
[»] scaffold0012 (1 HSPs)
scaffold0012 (124-218)||(206497-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-218)||(173518-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (124-218)||(38926-39020)
[»] scaffold0182 (1 HSPs)
scaffold0182 (147-215)||(24004-24072)
[»] scaffold0007 (1 HSPs)
scaffold0007 (129-218)||(230867-230956)
[»] scaffold1320 (1 HSPs)
scaffold1320 (124-284)||(1355-1515)
[»] scaffold0227 (2 HSPs)
scaffold0227 (124-191)||(16028-16095)
scaffold0227 (183-218)||(16125-16160)
[»] scaffold0022 (2 HSPs)
scaffold0022 (124-218)||(40086-40182)
scaffold0022 (124-218)||(138146-138242)
[»] scaffold0003 (1 HSPs)
scaffold0003 (147-200)||(351360-351413)


Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 1105416 - 1105741
Alignment:
Q  1 cctctacaagcctgagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcat 100  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1105416 cctctacaagcttgagcagggacgtcttt-agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcat 1105514  T
Q  101 gattgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1105515 gattgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaa 1105614  T
Q  201 aaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1105615 aaaatataaatagaacatcactcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 1105714  T
Q  301 ggctctgagcctgggtattcatctcac 327  Q
    ||||||||||||| |||||| ||||||    
T  1105715 ggctctgagcctgagtattcttctcac 1105741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 28 - 303
Target Start/End: Complemental strand, 5129038 - 5128762
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggtt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  5129038 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggataggcctcaagagtgg-ggttcctcatgattgattttggtgttaggtggaggtt 5128940  T
Q  128 gctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctt-t 226  Q
     |||||||||| ||||||||||||||||||| |||| || |||||||||||  | ||||||||||||||||||||||||||||||||| ||| ||||| |    
T  5128939 cctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatatcgctcttct 5128840  T
Q  227 tnnnnnnnntacgtttt-gattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
              ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  5128839 aaaaaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggc 5128762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 37514557 - 37514815
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgt 115  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||||||||||    
T  37514557 gcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcctccaaggatgggcctcaagagtgggggtttctcatgattgattttggtgt 37514656  T
Q  116 taggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    ||||||||| ||  ||||||||| |||||||||||||||||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  37514657 taggtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 37514756  T
Q  216 catcactcttt--tnnnnnnnntacgttttgattttatcactgacctcttttcattccc 272  Q
    |||| ||||||           ||||||||||||||||||||| |||||||||||||||    
T  37514757 catcgctctttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattccc 37514815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 32915297 - 32915571
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||||             |||||||| ||| ||||||||||||||||||||||    
T  32915297 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctc-------------aagagtgggggtccctcatgattgattttggtgtt 32915383  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||| |||| ||||||| |||||| |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  32915384 aggtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 32915483  T
Q  217 atcactcttttnnnnnnnnta-cgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||| |||||||         | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  32915484 atcgctcttttaaaaaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 32915571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 47128972 - 47129177
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  47128972 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 47129071  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||   ||||||        ||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||    
T  47129072 aatataaatagaacattgttcttttaaaaaaaatacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacgg 47129171  T
Q  303 ctctga 308  Q
    ||||||    
T  47129172 ctctga 47129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 34027568 - 34027764
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  34027568 ttttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 34027667  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  || ||||        ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | |||||||    
T  34027668 taaatagaacattgctttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggc 34027764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 103 - 301
Target Start/End: Complemental strand, 34768696 - 34768498
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||  | ||| ||||||||||||||||    
T  34768696 ttgattttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaa 34768597  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||        || |||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||| |||||    
T  34768596 aatataaatagaacattgctcttttaaaaaaaatatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacg 34768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 111 - 293
Target Start/End: Complemental strand, 43455645 - 43455463
Alignment:
Q  111 ggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaa 210  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaa 43455546  T
Q  211 tagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||  |||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  43455545 tagaacattgctcttttaaaaataatacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 112 - 303
Target Start/End: Original strand, 54780771 - 54780964
Alignment:
Q  112 gtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaat 211  Q
    |||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaat 54780870  T
Q  212 agaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||  |||||||          ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||    
T  54780871 agaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggc 54780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 103 - 295
Target Start/End: Original strand, 10978885 - 10979080
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||    
T  10978885 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 10978984  T
Q  203 aatataaatagaacatcactctttt---nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||||||  |||||||           |||||||||||||||||||| |||||||||||||||||||||  | |||| |||||||||    
T  10978985 aatataaatagaacattgctcttttaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccagagctaaacctccgaattctca 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 32128573 - 32128770
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  32128573 ttttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 32128672  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  |||||||         ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| | |||||||    
T  32128673 taaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggc 32128770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 103 - 298
Target Start/End: Complemental strand, 38209713 - 38209517
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  38209713 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 38209614  T
Q  203 aatataaatagaacatcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagg 298  Q
    ||||||||||||||||  ||||||          ||  ||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||    
T  38209613 aatataaatagaacattgctctttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcaagg 38209517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 291
Target Start/End: Complemental strand, 37777341 - 37777156
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||| || ||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  37777341 ttttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 37777242  T
Q  207 taaatagaacatcac-tcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaatt 291  Q
    |||||||||||| || | ||||        |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37777241 taaatagaacattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 37777156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 115 - 293
Target Start/End: Complemental strand, 2790851 - 2790673
Alignment:
Q  115 ttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaataga 214  Q
    ||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 2790752  T
Q  215 acatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||   ||||||         | ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  2790751 acattgttcttttaaaaaaaaaatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattct 2790673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 48209225 - 48209432
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||||||||||||  | ||||||||||||||||||||    
T  48209225 ttgattttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 48209324  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgat-----tttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||||||  |||||||          |||||||||||     ||||||||||  ||||||||| ||||||||||||||||| |||||||||    
T  48209325 aatataaatagaacattgctcttttaaaaaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattctca 48209424  T
Q  296 aggacggc 303  Q
     |||||||    
T  48209425 gggacggc 48209432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 10428327 - 10428120
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcac--------ctctaggtgtaccgcatatatacgatatcttgtatttatc 194  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||||||||        |||| |||||||||||||||||||  | ||||||||||||    
T  10428327 ttgattttggtgttaggtggaggttcctcatgtatacggtagtcattttcacaatttcacctctgggtgtaccgcatatatacggcaccttgtatttatc 10428228  T
Q  195 ttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctc 294  Q
    ||||||||||||||||||||||||  || ||||        ||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10428227 ttttaaaaaatataaatagaacattgct-ttttaaaaaaaataaattttgattttagcactgacctcttttcattcccagagccgagcctccgaattctc 10428129  T
Q  295 aaggacggc 303  Q
     ||||||||    
T  10428128 gaggacggc 10428120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 107 - 291
Target Start/End: Complemental strand, 54083360 - 54083176
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| | || | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  54083360 ttttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 54083261  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaatt 291  Q
    |||||||| |||   | ||||        ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  54083260 taaatagatcattgttttttttaaaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatt 54083176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 16845010 - 16845206
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt-aaaaaat 205  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||  | |||||||  ||||||||||| | ||| |||||||||||| |||||||    
T  16845010 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaat 16845109  T
Q  206 ataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||  |||||||        |||||||||||||||||||||  || |||||||| ||||||||||||||| ||||||| | |||||||    
T  16845110 ataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactg-gcttttttcatttccagagccgagcctccgaattcttagggacggc 16845206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 35465096 - 35465283
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||||||| || |||||||||| |||||| |||||||| | |||||||||||||||||||||  | ||| |||||||||| |||||||||    
T  35465096 ttttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatacg-caccttttatttatcttgtaaaaaata 35465194  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    |||||| |||||   ||||||        || |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  35465195 taaatataacattgttcttttaaaaaaaatatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctca 35465283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 19498493 - 19498677
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| | | ||||||||  |||||||  | ||| ||||||||||||||||||||    
T  19498493 ttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgc--atatacggcaccttatatttatcttttaaaaaata 19498590  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||  |||||||        |||||||||||||||||| || ||| |||||||||| ||||||||||||| |||||||    
T  19498591 taaatagaacattgctcttttaaacaaaatacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattct 19498677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 13460192 - 13460306
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||| ||| |||||||||||||||| | ||||||||||||||||||||    
T  13460192 ttgattttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaa 13460291  T
Q  203 aatataaatagaaca 217  Q
    |||||||||||||||    
T  13460292 aatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 35779443 - 35779249
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||| |||||||||  |||| |||||||||| |||| |||||||||||| | |||||||||||||||||||| | ||||||||||||||||||||||||    
T  35779443 ttttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaata 35779344  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    | ||||||||||  ||| |||        ||||||||||||||||||||  ||||||||||||||  ||| ||| |||| |||||||||||||||||    
T  35779343 t-aatagaacattgctc-tttaaaaaaaatacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggc 35779249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 150 - 295
Target Start/End: Original strand, 17679432 - 17679577
Alignment:
Q  150 ttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgatttt 249  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||  |||||||        ||||||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttttaaaaaaaatacgttttgatttt 17679531  T
Q  250 atcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    |||||||  ||||||||||||||||| ||||||||| |||||||||    
T  17679532 atcactggtctcttttcattcccagaaccgagcctccgaattctca 17679577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 16882513 - 16882317
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||| ||||| | |||  ||| ||||||||||||||||| | ||||||||| ||||| |||  | ||| ||||||||||||||||| ||    
T  16882513 ttttggtgttaggtgagggttccccatacatacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagta 16882414  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||   | ||||        ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||| | |||||||    
T  16882413 taaatagaacattgttttttttaaaaaaatacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggc 16882317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 40089505 - 40089700
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaa----- 201  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||||||||||||||  | ||| |||||||||||||||         
T  40089505 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatat 40089604  T
Q  202 ----aaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
        ||||||||||| |||||  || ||||        ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  40089605 aaataaatataaataaaacattgcttttttaaaaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattct 40089700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 38352373 - 38352197
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||| | ||||||||||||||||| | ||||||||||           | ||| ||||||||||||||||||||    
T  38352373 ttttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgcc----------accttatatttatcttttaaaaaata 38352284  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    |||||||| ||| ||| |||         |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  38352283 taaatagatcattactttttaaaaaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattct 38352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 51964736 - 51964892
Alignment:
Q  146 cattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt---aaaaaatataaatagaacatcactcttttnnnnnnnntacgttt 242  Q
    ||||||||||||| |||||| ||||||||||||  | ||||||||||||||||   ||||||||||||||||||||  |||||||        |||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttttaaaaaaaatacgttt 51964835  T
Q  243 tgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagga 299  Q
    |||||||||||  | |||||||||||||||||||||||| ||| ||||| |||||||    
T  51964836 tgattttatcatcggcctcttttcattcccagagccgagtctccgaattttcaagga 51964892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 55255254 - 55255443
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||             ||  | ||||||||||||||||||||    
T  55255254 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtg------------gcggcaccttgtatttatcttttaaaa 55255341  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||| ||||||  |||||||         || |||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||    
T  55255342 aatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacg 55255441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 23509920 - 23509846
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatac 177  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23509920 ttgattttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 10431509 - 10431442
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10431509 gcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 10431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 55255080 - 55255145
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55255080 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 55255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 47127981 - 47128047
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47127981 caggggcgtccctgagggggtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctcaa 47128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 17679223 - 17679283
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17679223 cgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 17679283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 48208461 - 48208516
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48208461 ctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 48208516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 45560758 - 45560704
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45560758 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctcaa 45560704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 303
Target Start/End: Complemental strand, 16922409 - 16922249
Alignment:
Q  145 tcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnnta--cgttt 242  Q
    |||||||||||| | ||  ||| |||||||||||| |  || ||||||||||||||||||||||||||||||||  |||||||         |  |||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgttt 16922310  T
Q  243 tgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||  ||||||||||||||| || ||||||||  |||||||| |||||||    
T  16922309 tgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggc 16922249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 38209891 - 38209842
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209891 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 36178684 - 36178772
Alignment:
Q  130 tcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||| |||||| |||||||| | | |||||| ||||||||||||| | ||||||||||||||||||| ||| ||||||||||||    
T  36178684 tcatgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacat 36178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 308
Target Start/End: Complemental strand, 9578728 - 9578574
Alignment:
Q  162 tgtaccgcatatatacga-tatcttgtatttatcttttaaaaaatataaatagaacatcactctttt--nnnnnnnntacgttttgat-----tttatca 253  Q
    ||||||||||||||| |  || ||||||||||||||||||||||||||||||||||||  |||||||          |||||||||||     |||||||    
T  9578728 tgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaagaaatacgttttgattttaatttatca 9578629  T
Q  254 ctgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
    ||  |||||||||| |||||||| |||||||| ||||||||||||||||| ||||    
T  9578628 cttgcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctga 9578574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 13459795 - 13459850
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  13459795 ctgagggggtgcaaacagctcaaacgagctgagcctcccttaaggatgggcctcaa 13459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 4167992 - 4167910
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||| |||||||||| |||||| |||||||||| | |||||| ||||||||||||  | ||||||||||||||||||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 24969426 - 24969488
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgc 169  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||    
T  24969426 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 24969488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 36118559 - 36118465
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||  | | |||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 36118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 51692009 - 51691913
Alignment:
Q  133 tgtatatggtagtcattttcacctcta--ggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt 227  Q
    ||||||||||||| |||||||| | |   |||||||||||||||||||  | ||||||||||||||||||||||| ||||||||||||  |||||||    
T  51692009 tgtatatggtagtgattttcactttttttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 23508564 - 23508432
Alignment:
Q  172 atatacgatatcttgtatttatcttttaaaaaat-ataaatagaacatcactcttttnnnnnnnn-tacgttttgattttatcactgacctcttttcatt 269  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||  ||| ||          ||| ||||||||||||||||| ||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcatt 23508465  T
Q  270 cccagagccgagcctctgaattctcaaggacgg 302  Q
    |||| ||||||||||| ||||| ||| ||||||    
T  23508464 cccaaagccgagcctccgaattttcatggacgg 23508432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 9579516 - 9579469
Alignment:
Q  36 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9579516 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 9585211 - 9585164
Alignment:
Q  36 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9585211 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 27596694 - 27596639
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  27596694 ctgagggggtgcgaacagctcaaacgagctgggcctcccccgaggatgggcctcaa 27596639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 27112036 - 27112130
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||| | | |||||| |||||||||| |  | ||||||||||||||||||||||| ||||| ||||||    
T  27112036 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 27112130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 34769583 - 34769533
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34769583 ggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaa 34769533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 13460305 - 13460361
Alignment:
Q  252 cactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctga 13460361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 24969716 - 24969787
Alignment:
Q  237 acgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
    |||||||| ||||||||||  ||||||||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  24969716 acgttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctga 24969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 39655332 - 39655261
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| | |||||||||||||||| ||  |  |||||||||||||||||||||| ||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacat 39655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 292
Target Start/End: Original strand, 52468292 - 52468459
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| |||||| ||| |||||| |||||||||| | | ||||   ||||||||||  | ||||||||||||||||||||||| ||||||||||||   ||    
T  52468292 ggttcctcatgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttc 52468391  T
Q  224 ttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattc 292  Q
    ||||        |||||||| ||||||| || ||||||||||||    |||||||||||||| ||||||    
T  52468392 tttt-aaaaaaatacgtttttattttattacagacctcttttcacctacagagccgagcctccgaattc 52468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 2135384 - 2135331
Alignment:
Q  162 tgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||| ||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  2135384 tgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 35780609 - 35780556
Alignment:
Q  30 gagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||| ||||||||||||||| || |||| ||||||||    
T  35780609 gagggggtgcaaacagctcaaccgagctgggcctcccccacggataggcctcaa 35780556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 40217238 - 40217327
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatag 213  Q
    |||| |||||||||||| || | ||||||| || | | |||| ||||||||||||| | ||| ||||||||||||||||||| |||||||    
T  40217238 ggttactcatgtatatgctaatgattttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 54779452 - 54779500
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 76  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  54779452 ctgagggagtgcaaacagctcaaccgagctgggcctcccccaaggatgg 54779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 15735142 - 15735189
Alignment:
Q  170 atatatacgatatcttgtatttatcttttaaaaaatataaatagaaca 217  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||    
T  15735142 atatatacgacgtcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 24969253 - 24969308
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  24969253 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 24969308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 37745011 - 37744916
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa-aaaatataaatagaacat 218  Q
    |||| |||| ||||| |||||| |||||||||| | | |||| ||||||||| ||| | ||| |||||||||||||| ||||| ||||||||||||    
T  37745011 ggttcctcaagtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 10042101 - 10042007
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||| |||||| |||||| |||||||| | |||||||| | |||| |||||  | ||||||||||| |||| |||||| ||||||||||||    
T  10042101 ggttcctcctgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacat 10042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 16844839 - 16844893
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  16844839 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 16844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 37777513 - 37777459
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||  ||||||| ||||||||||  |||||||||||    
T  37777513 tgagggggtgcaaacagctcaacagagctggacctccctcaatcatgggcctcaa 37777459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 32128403 - 32128444
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  32128403 ctgagggggtgcaaacagctcaacagagctgggcctccctca 32128444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 54083538 - 54083478
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  ||||||||| |||||||   |||||||||||    
T  54083538 cgtccctgagggggtgcaaacagctcaatagagctgggcatccctcagtcatgggcctcaa 54083478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 2791031 - 2790988
Alignment:
Q  26 ctctgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    |||||||||||||||||||||||||  |||||||| ||||||||    
T  2791031 ctctgagggggtgcaaacagctcaacagagctgggtctccctca 2790988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Complemental strand, 2975410 - 2975367
Alignment:
Q  239 gttttgattttatcactgacctcttttcattcccagagccgagc 282  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  2975410 gttttgattttatcattgacctcttttcattttcagagccgagc 2975367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 10978144 - 10978191
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctc 64  Q
    ||||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  10978144 caggggcgtccctgagagggtgcaaacagctcaaacgagctgcgcctc 10978191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 24614018 - 24614053
Alignment:
Q  183 cttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacat 24614053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 39329470 - 39329399
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||| || | |||||| | ||||||||| | | ||||||||||||||||||||||| |||| |||||||    
T  39329470 attttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacat 39329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 83
Target Start/End: Complemental strand, 23510917 - 23510887
Alignment:
Q  53 gagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||||||||    
T  23510917 gagctgggcctccctcaaggatgggcctcaa 23510887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 23510960 - 23510922
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggc 61  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  23510960 cgtccctgagggggtgcaaacagctcaaacgaactgggc 23510922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 36362964 - 36362886
Alignment:
Q  132 atgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaa 210  Q
    |||||||||||||| |||| ||| | | ||||||  |||||||||||  |  |||||||||||||||||||||| ||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaa 36362886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 40089340 - 40089390
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  40089340 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 40089390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 30507162 - 30507129
Alignment:
Q  185 tgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||| ||||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacat 30507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 24396940 - 24397028
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaata 212  Q
    |||| |||||||||| | |||| |||||||||| |  ||||| | |||||||||   | ||| ||||||||||||||||||| ||||||    
T  24396940 ggttcctcatgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 29425275 - 29425187
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaata 212  Q
    |||| ||| ||| ||||||||  |||||||||| ||  ||||| |||||||||||  | ||| ||||||| ||||||||||| ||||||    
T  29425275 ggttactcgtgtgtatggtagcaattttcacctttaaatgtactgcatatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 51964204 - 51964240
Alignment:
Q  47 tcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| |||| |||||||||||||||||||||||||    
T  51964204 tcaaacaagctaggcctccctcaaggatgggcctcaa 51964240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 15480295 - 15480010
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15480295 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 15480196  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15480195 aggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaatagaac 15480096  T
Q  217 atcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||  || |||        || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  15480095 atcggtc-tttaaaaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 15480010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 17 - 307
Target Start/End: Original strand, 19523093 - 19523384
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19523093 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 19523192  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  19523193 aggtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 19523292  T
Q  217 atcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctg 307  Q
    | | ||||||           ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  19523293 accgctctttaaaaaaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggctctg 19523384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 23 - 303
Target Start/End: Complemental strand, 36188079 - 36187799
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgg 122  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  36188079 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgttaggtgg 36187980  T
Q  123 gggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcact 222  Q
     |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||| ||    
T  36187979 aggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaacatcgct 36187880  T
Q  223 cttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||         ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  36187879 cttttaaaaaaaaaacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggc 36187799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 28 - 302
Target Start/End: Original strand, 2274809 - 2275070
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggtt 127  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||              ||||||||||||||||||||||||||||    
T  2274809 ctgagggggtgcaaacagctcaaatgagttgggcctccctcaaggatggacctcaaga--------------tgattgattttggtgttaggtgggggtt 2274894  T
Q  128 gctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt 227  Q
     ||| |||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  2274895 cctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcgctctttt 2274994  T
Q  228 -nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
             ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||    
T  2274995 aaaaaaaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 38869479 - 38869278
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  38869479 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 38869380  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||||||  |||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||    
T  38869379 taaatagaacattgctcttttaaaaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccct 38869280  T
Q  307 ga 308  Q
    ||    
T  38869279 ga 38869278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 16592194 - 16591989
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||| | | ||||||||||||||| ||    
T  16592194 ttgattttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaa 16592095  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        || ||||||||||||||| || ||||||||||||| ||||||||||||||  |||||||||||||||    
T  16592094 aatataaatagaacattgctcttttaaaaaaaatatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacgg 16591995  T
Q  303 ctctga 308  Q
    | ||||    
T  16591994 ccctga 16591989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 27078994 - 27079198
Alignment:
Q  106 attttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaat 205  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||    
T  27078994 attttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaat 27079093  T
Q  206 ataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||  |||||||          ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||    
T  27079094 ataaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggc 27079193  T
Q  304 tctga 308  Q
     ||||    
T  27079194 cctga 27079198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 34756486 - 34756293
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  34756486 ttgattttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 34756387  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||||||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  34756386 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctca 34756293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 16198910 - 16198723
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||| ||||||||||||| | ||| ||||||||||||||||||||    
T  16198910 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaata 16198811  T
Q  207 taaatagaacatcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||  || |||          ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  16198810 taaatagaacattgctttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 16198723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 106 - 303
Target Start/End: Original strand, 30854312 - 30854510
Alignment:
Q  106 attttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaat 205  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||  ||||||||||||||||||  | |||||||||||||||||||||||    
T  30854312 attttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaat 30854411  T
Q  206 ataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||  |||||||         |||||||| |||||||| ||||||| ||||||||||||||||||||||||  |||| ||| |||||||    
T  30854412 ataaatagaacattgctcttttaaaaaaaaatacgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggc 30854510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 16799443 - 16799244
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||| ||||||||| |||||||||| |||| |||||||||||| | |||||||||||||||||||  | ||| ||||||| ||||||||||||    
T  16799443 ttttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaata 16799344  T
Q  207 taaatagaaca-tcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||| | ||||||||          ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||    
T  16799343 taaatagaacatttactcttttaaaaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggc 16799244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 129 - 303
Target Start/End: Complemental strand, 31194705 - 31194532
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttn 228  Q
    |||||||||| |||||| |||||||||||| ||| |||||||||||||||  | ||||||||||||||||||||||||||||||||||||  |||||||     
T  31194705 ctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttta 31194607  T
Q  229 nnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
           |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||    
T  31194606 aaagaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggc 31194532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 9364275 - 9364462
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  9364275 ttttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 9364374  T
Q  207 taaatagaacatcactctt-ttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||  || ||           ||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  9364375 taaatagaacattgcttttaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattct 9364462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 28822458 - 28822256
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  28822458 ttttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 28822359  T
Q  207 taaatagaacatcactctttt------nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||  |||||||              |||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||| | ||||    
T  28822358 taaatagaacattgctcttttaaaaaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggac 28822259  T
Q  301 ggc 303  Q
    |||    
T  28822258 ggc 28822256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 308
Target Start/End: Complemental strand, 22986658 - 22986472
Alignment:
Q  123 gggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcact 222  Q
    ||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||  ||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgct 22986559  T
Q  223 ctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
    |||||         ||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| ||||||| ||||    
T  22986558 cttttaaaaaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctga 22986472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 7670908 - 7671114
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt-aaaaaat 205  Q
    |||||||||||||||||| |  |||||||||| ||||||||||||||||| | ||||||||| | |||||||  | ||| |||||||||||| |||||||    
T  7670908 ttttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaat 7671007  T
Q  206 ataaatagaacatcactctttt---------nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaa 296  Q
    |||||||||||||  || ||||                 ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||    
T  7671008 ataaatagaacattgctttttttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaa 7671107  T
Q  297 ggacggc 303  Q
    |||||||    
T  7671108 ggacggc 7671114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 145 - 285
Target Start/End: Original strand, 7338021 - 7338162
Alignment:
Q  145 tcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttt-tnnnnnnnntacgtttt 243  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||           |||||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgtttt 7338120  T
Q  244 gattttatcactgacctcttttcattcccagagccgagcctc 285  Q
    |||||||||  ||||||||||||||||| |||||||||||||    
T  7338121 gattttatccttgacctcttttcattcctagagccgagcctc 7338162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 27924066 - 27924253
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||| ||| ||| |||||||||| |||||||||||| |||| | | |||||||||||||||||  | ||| ||||||||||||||||||||    
T  27924066 ttttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaata 27924165  T
Q  207 taaatagaacatcac-tcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    |||||||  |||  | | ||||        ||||||||||||||||||||| ||||||||||||| ||||| |||||| | |||||||    
T  27924166 taaataggtcattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattct 27924253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 40389652 - 40389541
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||| |||||||||||||||| |||||  ||| ||||||||||||||||| | | |||||||||||||||||| | ||| ||||||||||||||||||||    
T  40389652 ttttagtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaata 40389553  T
Q  207 taaatagaacat 218  Q
    ||||||||||||    
T  40389552 taaatagaacat 40389541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 263
Target Start/End: Complemental strand, 23284164 - 23284022
Alignment:
Q  121 gggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatca 220  Q
    ||||||| |||||||||| |||||||||||||| || | |||||||||||||||||||| | ||||||||||   |||||||||||||||||||||||      
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattg 23284065  T
Q  221 ctcttttnnnnnnnntacgttttgattttatcactgacctctt 263  Q
    |||||||        ||||||||||||||||||||| ||||||    
T  23284064 ctcttttaaaaaaaatacgttttgattttatcactggcctctt 23284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 308
Target Start/End: Complemental strand, 31881527 - 31881347
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttn 228  Q
    |||||||||| |||||| ||||||| |||| | ||| |||||||||||||  | | ||||||||||||||||||||||||||||||||||  |||||||     
T  31881527 ctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctctttta 31881429  T
Q  229 nnnnnnnta--cgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
            |  |||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||| ||||||| ||||    
T  31881428 aaaaaaaaaaacgttttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctga 31881347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 31881657 - 31881590
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31881657 gcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 31881590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 34756669 - 34756615
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756669 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 34756615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 1366625 - 1366531
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||| |||| |||||| |||||||| | |||||||| ||||||||||| | |||||||||||||||| |||||||| ||||||||||||    
T  1366625 ggttcctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacat 1366531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 33037781 - 33037875
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||| |  ||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  33037781 ggttcctcatgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacat 33037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 36868970 - 36868881
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |||||| |||||||| | | |||||||| ||||||||||| | ||||||||||||||||||||||  ||||||||||||    
T  36868970 ctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacat 36868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 16592911 - 16592845
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  16592911 caggggcgtccctgagggggtgcaaacagctcaaacgagctggacctcctttaaggatgggcctcaa 16592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 30853266 - 30853332
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  30853266 caggggcgtcccttagggggtgcaaacagctcaaacgagctgggcctccttcaaggatggacctcaa 30853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 22987518 - 22987470
Alignment:
Q  32 gggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 80  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22987518 gggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcct 22987470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 23284014 - 23283947
Alignment:
Q  236 tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||||||||| |||||||||||||| | | | ||||||||||||||||| |||||||    
T  23284014 tacgttttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggc 23283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 40389518 - 40389467
Alignment:
Q  242 ttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattct 40389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 2530996 - 2530902
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||  ||||| |||||||||| | | ||||||| |||||||||| |  |||||||||||||||||||||  ||||||||||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacat 2530902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 14318484 - 14318390
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||  | | | |||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 14318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 2024736 - 2024647
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||| ||||||| || | |||||| | ||||||||||  |  |||||||||||||| ||||||| ||||||||||||    
T  2024736 ctcatgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacat 2024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 26719043 - 26718954
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||  |||||| |||||||||| |  ||||| ||||||||||||| |  |||||||||||||||||||| | ||||||||||||    
T  26719043 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 26988787 - 26988698
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||  |||||| |||||||||| |  ||||| ||||||||||||| |  |||||||||||||||||||| | ||||||||||||    
T  26988787 ctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26988698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 34425904 - 34425998
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||| | ||||| | || |||||||| | ||||||||||  | |||||||||||||||||||||||  |||||||||||    
T  34425904 ggttcctcatgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacat 34425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 10407467 - 10407556
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||| ||| |||||| |||||||| | ||| |||||  ||||| ||||| | ||||| ||||||||||||||||| ||||||||||||    
T  10407467 ctcatgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacat 10407556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 31194820 - 31194767
Alignment:
Q  30 gagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  31194820 gaggaggtgcaaacaactcaaacgaactgggcctctctcaaggatgggcctcaa 31194767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 16199081 - 16199026
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  16199081 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 16199026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 2412089 - 2412183
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||  ||||| |||||||| | | | || | ||||||||||||| |  |||||||||| ||||||||||| ||||||||||||    
T  2412089 ggttcctcatgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacat 2412183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 22648790 - 22648741
Alignment:
Q  169 catatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||||    
T  22648790 catatatacgacacattgtatttatcttttaaaaaatttaaatagaacat 22648741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 24395745 - 24395834
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||| |||| ||| || |||||||||| | | ||||  | |||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  24395745 ctcatctatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 24395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 27923891 - 27923951
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  ||||||| |||||||||   |||||||||||    
T  27923891 cgtccctgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaa 27923951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 606214 - 606249
Alignment:
Q  183 cttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  606214 cttgtatttatcttttaaaaaatttaaatagaacat 606249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 10543682 - 10543768
Alignment:
Q  132 atgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||| |||||| |||||||||| | | |||| |||||||||||   | ||| ||||||||||||||||||| ||| | ||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacat 10543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 11242417 - 11242323
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||| || || | | |||| | |||||||||   || |||||||||||||||||||||  ||||||||||||    
T  11242417 ggttcctcatgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacat 11242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 16799610 - 16799556
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||  ||||| |||||||||||   |||||||||||    
T  16799610 tgagggggtgcaaacagctcaatagagctaggcctccctcagtcatgggcctcaa 16799556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 17344993 - 17345051
Alignment:
Q  160 ggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||| | || |||||||||||||  | |||||||| ||||||||||||    
T  17344993 ggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacat 17345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 38869647 - 38869593
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||   ||||||||||||||||   |||||||||||    
T  38869647 tgagggggtgcaaacagctcaacaaagctgggcctccctcagtcatgggcctcaa 38869593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 8433629 - 8433593
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctcc 65  Q
    |||||||||||||||||||| || |||||||||||||    
T  8433629 tgagggggtgcaaacagctctaatgagctgggcctcc 8433593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 41911680 - 41911636
Alignment:
Q  160 ggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaa 204  Q
    |||||||||| ||||||||| | ||||||||| ||||||||||||    
T  41911680 ggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaa 41911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 14146205 - 14146491
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  14146205 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgtt 14146304  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  14146305 aggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 14146404  T
Q  217 atcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||| |||||||        ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  14146405 atcgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggc 14146491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 17 - 282
Target Start/End: Complemental strand, 41697345 - 41697080
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  41697345 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcatcaagagtgggggttcctcatgattgattttggtgtt 41697246  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||| ||||||||||||||| ||| | ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  41697245 aggtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaac 41697146  T
Q  217 atcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagc 282  Q
    ||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  41697145 atcgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagc 41697080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 301
Target Start/End: Original strand, 16139972 - 16140244
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggttg 128  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||| ||     
T  16139972 tgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggtctcaagcgtgggggttcctcatgattgattttagtgttaggtggggattc 16140071  T
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttn 228  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||     
T  16140072 ctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaatagaacatcactctttta 16140171  T
Q  229 nnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
           ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  16140172 aaaaaaatacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 28 - 303
Target Start/End: Original strand, 6771707 - 6771985
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggtt 127  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  6771707 ctgagggggtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtggaggtt 6771806  T
Q  128 gctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttt- 226  Q
     ||| |||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||| ||||||     
T  6771807 cctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttta 6771906  T
Q  227 --tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
                |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  6771907 aaaaaaaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 6771985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 300
Target Start/End: Original strand, 3406335 - 3406607
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggttg 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  3406335 tgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtgggggttc 3406434  T
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt- 227  Q
    |||||||||| ||||||||||||||||||   |||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||     
T  3406435 ctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttta 3406534  T
Q  228 nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
             ||||||| |||||||||||||||||||||||||||| |||| |||||||  |||||||| ||||    
T  3406535 aaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggac 3406607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 29 - 300
Target Start/End: Complemental strand, 3440485 - 3440213
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggttg 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  3440485 tgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtgggggttc 3440386  T
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt- 227  Q
    |||||||||| ||||||||||||||||||   |||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||| |||||||     
T  3440385 ctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttta 3440286  T
Q  228 nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
             ||||||| |||||||||||||||||||||||||||| |||| |||||||  |||||||| ||||    
T  3440285 aaaaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattctcagggac 3440213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 103 - 309
Target Start/End: Original strand, 44655732 - 44655938
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  44655732 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 44655831  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        || ||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  44655832 aatataaatagaacattgctcttttaaaaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacgg 44655931  T
Q  303 ctctgag 309  Q
    | |||||    
T  44655932 ccctgag 44655938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 5316671 - 5316871
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  5316671 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 5316770  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        |||||||||||||||||||||||||||||||||||| |  | ||||||||  |||||||| ||||||    
T  5316771 aatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacgg 5316870  T
Q  303 c 303  Q
    |    
T  5316871 c 5316871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 107 - 310
Target Start/End: Original strand, 17168951 - 17169154
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||| | | ||| ||||||||||||||||||||    
T  17168951 ttttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaata 17169050  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||||||  || ||||        |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||| ||    
T  17169051 taaatagaacattgctttttttaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccct 17169150  T
Q  307 gagc 310  Q
    ||||    
T  17169151 gagc 17169154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 23185422 - 23185623
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||||||||||||||||||||||||    
T  23185422 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata 23185521  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||||||  |||||||        ||||||||||||||||||||| |||||||||| |||  |||||||||||| ||||||||| | ||||| ||    
T  23185522 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccct 23185621  T
Q  307 ga 308  Q
    ||    
T  23185622 ga 23185623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 5027544 - 5027742
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||  | ||||||||||||||||||||||||    
T  5027544 ttttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata 5027643  T
Q  207 taaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  |||||||          ||||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  5027644 taaatagaacattgctcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggc 5027742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 303
Target Start/End: Original strand, 50881424 - 50881620
Alignment:
Q  106 attttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaat 205  Q
    ||||||||||||||||| |||| ||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  50881424 attttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaat 50881523  T
Q  206 ataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||  |||||||        ||  |||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||    
T  50881524 ataaatagaacattgctctttt-aaaaaaatagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggc 50881620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 4971736 - 4971543
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||||||||||||||| || ||||||||||||||||||||||||    
T  4971736 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaata 4971637  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||  ||||||         || ||||||||||||||||||  |||||||||||||| || ||||||||| ||||||||| ||||    
T  4971636 taaatagaacattgctctttaaaaaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggac 4971543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 19955712 - 19955898
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||| | ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  19955712 ttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaata 19955811  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    |||||||| |||  || |||         | ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  19955812 taaatagatcattgctttttaaaaaaaaattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 19955898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 40501908 - 40501706
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||||| ||||  ||||||||| |||||||||||| |||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  40501908 ttttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 40501809  T
Q  207 taaatagaacatcac-tcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctc 305  Q
    |||||||| ||| || | ||||        ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| | ||||||| |    
T  40501808 taaatagatcattactttttttttaaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccc 40501709  T
Q  306 tga 308  Q
    |||    
T  40501708 tga 40501706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 6888475 - 6888593
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgg 122  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  6888475 cgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaagcgg 6888574  T
Q  123 gggttgctcatgtatatgg 141  Q
    ||||| ||| |||||||||    
T  6888575 gggttcctcgtgtatatgg 6888593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 303
Target Start/End: Original strand, 6889644 - 6889801
Alignment:
Q  145 tcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttg 244  Q
    |||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||        |||||||||    
T  6889644 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt-aaaaaaatacgttttg 6889742  T
Q  245 attttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||    
T  6889743 attttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggc 6889801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 303
Target Start/End: Original strand, 6891490 - 6891647
Alignment:
Q  145 tcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttg 244  Q
    |||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||        |||||||||    
T  6891490 tcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt-aaaaaaatacgttttg 6891588  T
Q  245 attttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||    
T  6891589 attttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggc 6891647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 133 - 303
Target Start/End: Complemental strand, 21741029 - 21740856
Alignment:
Q  133 tgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt---nn 229  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||  | |||||||||||||||||||||||| |||||||||||  |||||||         
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  230 nnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
          ||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  21740929 aaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggc 21740856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 13913600 - 13913402
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatac--gatatcttgtatttatcttttaaaaaa 204  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||  |  | ||| ||||||||||||||||||    
T  13913600 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaa 13913501  T
Q  205 tataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||| |||  || ||||        ||| ||||||||||||||||| | ||||||||||| ||||||| |||||| ||||||| | |||||||    
T  13913500 tataaatagatcattgcttttttaaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggc 13913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 27559635 - 27559743
Alignment:
Q  110 tggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataa 209  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataa 27559734  T
Q  210 atagaacat 218  Q
    |||||||||    
T  27559735 atagaacat 27559743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 9173141 - 9172944
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||||||||||||||  | ||| ||||||||||||||||||||    
T  9173141 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaata 9173042  T
Q  207 taaatagaacatcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||   | |||          ||| |||| | |||||||| | |||||||||||||||||||||||||||| ||||||| | |||||||    
T  9173041 taaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggc 9172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 9181123 - 9180926
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||||||||||||||  | ||| ||||||||||||||||||||    
T  9181123 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaata 9181024  T
Q  207 taaatagaacatcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||   | |||          ||| |||| | |||||||| | |||||||||||||||||||||||||||| ||||||| | |||||||    
T  9181023 taaatagaacattgttttttaaaacaaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggc 9180926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 107 - 291
Target Start/End: Complemental strand, 51607558 - 51607374
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatac-gatatcttgtatttatcttttaaaaaat 205  Q
    ||||||| |||| |||| ||| |||||||||| ||||||||||||||| | | |||||||||||||||||| |  | ||| |||||||||||||||||||    
T  51607558 ttttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaat 51607459  T
Q  206 ataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaatt 291  Q
    ||||||| |||||   | ||||        |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51607458 ataaataaaacat-tttttttttaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatt 51607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 107 - 285
Target Start/End: Complemental strand, 1366996 - 1366819
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||| || | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  1366996 ttttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 1366897  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctc 285  Q
    ||||||||||||  ||| ||         || ||||| | |||||||||| |||||||||||||||||||| |||||||    
T  1366896 taaatagaacattgctc-ttaaaaaaaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctc 1366819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 303
Target Start/End: Complemental strand, 22865538 - 22865382
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnn-tacgttttga 245  Q
    |||||||||| | ||||||||| |||||||    ||||||||||||||||||||||||||||||||||||||  |||||||         ||||||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgttttga 22865440  T
Q  246 ttttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  22865439 ttttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggc 22865382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 27906839 - 27906650
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||             ||  | ||||||||||||||||||||    
T  27906839 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtg------------gcggcaccttgtatttatcttttaaaa 27906752  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||| ||||||  |||||||         || |||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||    
T  27906751 aatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacg 27906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 44655539 - 44655604
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44655539 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 44655604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 27907002 - 27906949
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27907002 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 34247151 - 34247216
Alignment:
Q  236 tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  34247151 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 34247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 38547137 - 38547043
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||||| |||| |||||||| | | |||||||| ||||||||||  | ||||||||||||||||||||||| ||||||||||||    
T  38547137 ggttcctcatgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 38547043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 26803960 - 26804045
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaata 212  Q
    |||| |||||||||| |||||| ||||||||||    ||||| ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  26803960 ggtttctcatgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 10912149 - 10912094
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  10912149 ctgagggggtgcgaacagctcaaacgagctgggcctcctccaaggatgggcctcaa 10912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 43235871 - 43235775
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttt--taaaaaatataaatagaacat 218  Q
    |||| |||||||||| | |||| |||||||||| | |||||||  ||||||||||| |||||||||||||||||   ||||||| ||||||||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacat 43235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 38853539 - 38853627
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaaca 217  Q
    |||||||||| |||||| |||||||||| | | | |||  ||||||||||| | |||||||||||| |||||||||| |||||||||||    
T  38853539 ctcatgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 291
Target Start/End: Original strand, 44895647 - 44895827
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||| | |||||||| |       ||  | ||| ||||||||||||||||||||    
T  44895647 ttttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccacc------cgccaccttatatttatcttttaaaaaata 44895740  T
Q  207 taaatagaacatcactcttttnnnnnnnn--tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaatt 291  Q
    |||||||| |||   | ||||          || ||||||||||| |||| |||||||||||||||||||| |||| |||| |||||    
T  44895741 taaatagatcattgtttttttaaaaaaaaaatatgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatt 44895827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 23181722 - 23181777
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||    
T  23181722 ctgagggggtgcaaacagctcaaccgagctgggccacccccaatgatgggcctcaa 23181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 5028028 - 5027982
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatg 75  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5028028 tgagggggtgcaaacagctcaaccgagctgggcctcccccaaggatg 5027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 17322684 - 17322630
Alignment:
Q  164 taccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||    
T  17322684 taccgcatatatacgctacattgtatttatctttaaaaaaatataaatagaacat 17322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 33170771 - 33170865
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||  | |||||||||||||||||| | |  |||||||||  ||||||||||| |||||| |||||    
T  33170771 ggtttctcatgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacat 33170865  T

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Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 45758506 - 45758600
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| | | ||||   ||||||||| | | |||| |||||||||||||||||| ||||||||||||    
T  45758506 ggttcctcatgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacat 45758600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 50880568 - 50880614
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcct 63  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  50880568 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcct 50880614  T

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Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 13913776 - 13913716
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  13913776 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 13913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 40502084 - 40502024
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  40502084 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 40502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 1367166 - 1367111
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  1367166 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 1367111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 44895478 - 44895519
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  44895478 ctgagggggtgcaaacagctcaacagagctgggcctccctca 44895519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 9173310 - 9173255
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  9173310 ctgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaa 9173255  T

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Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 39134824 - 39134729
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatc-ttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||  ||||| ||| |||||| | ||||||  ||||||||||   | |||||||||||| ||||||||||| ||||||||||||    
T  39134824 ggttcctcatgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacat 39134729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 27559459 - 27559513
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||  ||||||| |||||||||   |||||||||||    
T  27559459 tgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaa 27559513  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 34247068 - 34247106
Alignment:
Q  140 ggtagtcattttcacctctaggtgtaccgcatatatacg 178  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  34247068 ggtagtcattttcatctcttggtgtaccgcatatatacg 34247106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 5315792 - 5315841
Alignment:
Q  15 agcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctc 64  Q
    ||||||| ||||||||||||| || ||||| |||||||||| ||||||||    
T  5315792 agcaggggcgtctctgaggggatgtaaacacctcaaacgagttgggcctc 5315841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 51607727 - 51607674
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| ||||||||||||||||  ||||||||||| ||||||  ||||||||||    
T  51607727 tgaggtggtgcaaacagctcaatagagctgggccttcctcaatcatgggcctca 51607674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 12037589 - 12037637
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctcc 65  Q
    ||||| ||||| |||||||||||||||||||| |  |||||||||||||    
T  12037589 cagggccgtctttgagggggtgcaaacagctctactgagctgggcctcc 12037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 303
Target Start/End: Original strand, 47467581 - 47467868
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgt 115  Q
    |||||| |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47467581 gcaggggcgtccctgagggg-tgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 47467679  T
Q  116 taggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||||| ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  47467680 taggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 47467779  T
Q  216 catcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||| ||||||           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  47467780 catcgctctttaaaaaaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggc 47467868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 21582668 - 21582956
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21582668 caggggcgtctctgagggggtgcaaacagctcaaacgagctgggcatcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 21582767  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||||| |||    
T  21582768 aggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaac 21582867  T
Q  217 atcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||   ||||||          ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||    
T  21582868 attgttcttttaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggc 21582956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 14 - 309
Target Start/End: Original strand, 42098695 - 42098991
Alignment:
Q  14 gagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggt 113  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  42098695 gagcaggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggt 42098794  T
Q  114 gttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatag 213  Q
    |||| || |||||| |||||||||| |||||||||||||||||||  || |||||||||||||||  | |||||||||||||||||||||||||||||||    
T  42098795 gttaagtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 42098894  T
Q  214 aacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctgag 309  Q
    |||||| |||||||          || ||||||||||||||||| |||||||||||| || |||| ||||||  ||||||||| ||||||| |||||    
T  42098895 aacatcgctcttttaaaaaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctgag 42098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 53149524 - 53149244
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgt 115  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  53149524 gcaggggcgtccctcagggggtgcaaacagctcaaacgagctgggcctccaccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 53149425  T
Q  116 taggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||||||||||| |||||||||| |||||||||||| | ||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  53149424 taggtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 53149325  T
Q  216 catcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    |||| |||||||          ||||||||||||||||||||  |||||||||||||| || | ||||||| |||||||||    
T  53149324 catcgctcttttaaaaaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattctca 53149244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 102 - 309
Target Start/End: Complemental strand, 8073461 - 8073255
Alignment:
Q  102 attgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaa 201  Q
    |||| ||||||||||| |||||| || |||||||||| ||||||||||||||| | | |||||||||||||||||||| | |||||||||||||||||||    
T  8073461 attgcttttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaa 8073363  T
Q  202 aaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  8073362 aaatataaatagaacattactcttttaaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacg 8073263  T
Q  302 gctctgag 309  Q
    || |||||    
T  8073262 gccctgag 8073255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 103 - 309
Target Start/End: Complemental strand, 54619326 - 54619119
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  54619326 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 54619227  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || ||||||||||||||| || | |||||||||| ||||||||||||||| ||||||||| |||||    
T  54619226 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacg 54619127  T
Q  302 gctctgag 309  Q
    || |||||    
T  54619126 gccctgag 54619119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 103 - 302
Target Start/End: Original strand, 18372462 - 18372665
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgc----atatatacgatatcttgtatttatctttt 198  Q
    |||||||||||||||| ||||| || |||||||||| |||||||||||||||||||  |||||||||    |||||||||| | ||||||||||||||||    
T  18372462 ttgattttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatctttt 18372561  T
Q  199 aaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagg 298  Q
    ||||||||||||||||||||  |||||||        ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |    
T  18372562 aaaaaatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctcaaag 18372661  T
Q  299 acgg 302  Q
    ||||    
T  18372662 acgg 18372665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 38681216 - 38681010
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||||||||| | ||||||||||| |||||  | ||||||||||||||||||||    
T  38681216 ttgattttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaa 38681117  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||    
T  38681116 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 38681017  T
Q  302 gctctga 308  Q
    || ||||    
T  38681016 gccctga 38681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 44708464 - 44708665
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||| |||||||||  | ||| ||||||||||||||||||||    
T  44708464 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaata 44708563  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||||||  || ||||        ||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||| | ||||||||||    
T  44708564 taaatagaacatttctttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggctct 44708663  T
Q  307 ga 308  Q
    ||    
T  44708664 ga 44708665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 34290755 - 34290558
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  34290755 ttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 34290656  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||   | ||||         ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  34290655 taaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggc 34290558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 3954019 - 3953819
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||  |||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  3954019 ttgattttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 3953920  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||   ||||||        ||| |||| |||||||||||| |||||||||||| ||||||| || |||| ||||||||| ||||||    
T  3953919 aatataaatagaacattgttcttttaaaaaaaatacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacgg 3953820  T
Q  303 c 303  Q
    |    
T  3953819 c 3953819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 27078692 - 27078490
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||  |  |||||||||||||||||||    
T  27078692 ttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaa 27078593  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||||||  || ||||          || ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||||    
T  27078592 aatataaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggac 27078493  T
Q  301 ggc 303  Q
    |||    
T  27078492 ggc 27078490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 27084489 - 27084287
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||  |  |||||||||||||||||||    
T  27084489 ttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaa 27084390  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||||||  || ||||          || ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||||    
T  27084389 aatataaatagaacattgcttttttaaaaaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggac 27084290  T
Q  301 ggc 303  Q
    |||    
T  27084289 ggc 27084287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 43207356 - 43207161
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||||||||||||||  | ||| ||||||||||||||||||||    
T  43207356 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccttt-gatgtaccgcatatatacggcaccttatatttatcttttaaaaaata 43207258  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  |||||||        |||||||| | |||||||||| ||||||||||||||||||||||||||||  |||||| | |||||||    
T  43207257 taaatagaacattgctcttttaaaaaaaatacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggc 43207161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 36716148 - 36715946
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||  |||| ||||| ||| ||| ||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  36716148 ttgattttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 36716049  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||||||  |||||||          || ||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||    
T  36716048 aatataaatagaacattgctcttttaaataaaaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggac 36715949  T
Q  301 ggc 303  Q
    |||    
T  36715948 ggc 36715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 53507003 - 53506815
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| || ||| ||||||||||||||||||||    
T  53507003 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaata 53506904  T
Q  207 taaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||   | ||||          || |||||||||||||||||| ||||| |||||||||||||||||||||  |||||||    
T  53506903 taaatagaacattgtttttttaaaaaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattct 53506815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 107 - 310
Target Start/End: Original strand, 37168354 - 37168558
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||| |||||||||||| ||| |||||||||| ||||||||||||||||| | ||| |||| ||||||||||  | ||| ||||||||||||||||||||    
T  37168354 ttttagtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaata 37168453  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctc 305  Q
    ||||||||||||   | ||||         ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| |    
T  37168454 taaatagaacattgtttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggcgc 37168553  T
Q  306 tgagc 310  Q
    |||||    
T  37168554 tgagc 37168558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 119 - 295
Target Start/End: Complemental strand, 50258731 - 50258554
Alignment:
Q  119 gtgggggttgctcatgtatatggtagtcattttcacc-tctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaaca 217  Q
    ||||||||| |||||| |||   |||||||||||||| ||  |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaaca 50258632  T
Q  218 tcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    || |||||||        || ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||    
T  50258631 tcgctctttttaaaaaaatatgttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctca 50258554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 50939352 - 50939156
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||| |||| | ||||||||  |||||||||  | ||| ||||||||||||||||||||    
T  50939352 ttttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaata 50939253  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||| |||  || ||||        ||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||||| | |||||||    
T  50939252 taaatagatcattgctttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggc 50939156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 303
Target Start/End: Original strand, 36605974 - 36606148
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatc-ttttaaaaaatataaatagaacatcactctttt 227  Q
    |||||||||| |||||| ||||||| |||| |||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||  |||| ||    
T  36605974 ctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctatt 36606072  T
Q  228 nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
            |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| |||||||    
T  36606073 aaaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggc 36606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 54407276 - 54407077
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||| | | |||||||||||||||||  | ||| ||||||||||||||||||||    
T  54407276 ttttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaata 54407178  T
Q  207 taaatagaacatcactctttt----nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||   | ||||             |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| | ||||||    
T  54407177 taaatagaacattgttttttttttaaaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacgg 54407078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 9878806 - 9878643
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||| ||||| |||||||| || ||||||| | ||||||||||||||| | ||||||||||||||||||   | ||| ||||||||||||||||||||    
T  9878806 ttttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaata 9878707  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattc 270  Q
    ||||||||| ||  |||||||        ||||||| |||||||||||||||||||||||||||    
T  9878706 taaatagaatattgctcttttaaaaaaaatacgtttagattttatcactgacctcttttcattc 9878643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 50258800 - 50258716
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatg 101  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50258800 caggggcgtccctgagggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatg 50258716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 36716341 - 36716276
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36716341 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 38681413 - 38681348
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38681413 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 27078873 - 27078819
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27078873 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 27084670 - 27084616
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27084670 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27084616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 82
Target Start/End: Complemental strand, 54619508 - 54619454
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619508 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 54619454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3954917 - 3954852
Alignment:
Q  18 agggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3954917 aggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 3954852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 29620511 - 29620423
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtattt 191  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||| | | |||||||||||||||  | |||||||||    
T  29620511 ttgattgtggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 13795199 - 13795253
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13795199 tgagggcgtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 13795253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 303
Target Start/End: Complemental strand, 29620426 - 29620368
Alignment:
Q  245 attttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggc 29620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 54574929 - 54574835
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||||||||| ||||| || | | ||||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||    
T  54574929 ggttcctcatgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacat 54574835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 36605862 - 36605911
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36605862 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36605911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 48720500 - 48720433
Alignment:
Q  236 tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| | |||||||    
T  48720500 tacgttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggc 48720433  T

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Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 32319239 - 32319163
Alignment:
Q  142 tagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| | |||||||||||||||||| | |  |||||||||||||||||||||| ||||||||||||    
T  32319239 tagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacat 32319163  T

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Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 1148409 - 1148354
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  1148409 ctgagggggtgcgaacagctcaaacgagctgggcctcccccaaggatgggcttcaa 1148354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 18372033 - 18372095
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 80  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  18372033 caggggcgtctctgagggg-tgcaaacagttcaaacgagctggggctccctcaaggatgggcct 18372095  T

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Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 23641382 - 23641329
Alignment:
Q  162 tgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 29620667 - 29620618
Alignment:
Q  15 agcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctc 64  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  29620667 agcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctc 29620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 42453435 - 42453502
Alignment:
Q  151 tcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||| |||||||| |||||||||| || | ||||||||||||||||||||||| ||||| ||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacat 42453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 48157126 - 48157302
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||| ||||| ||||||||| ||||||||||  |||||||||||||||| | ||||||||||           | ||| ||||||||||||||||||||    
T  48157126 ttttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaata 48157215  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    |||||||| |||  |  ||||        |  |||||||||||||||||| |||||||| |||||| || ||||||||| |||||||    
T  48157216 taaatagatcattgcattttttttaaaaatgtgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattct 48157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 26279563 - 26279640
Alignment:
Q  141 gtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||| ||||||| || | ||||||  |||||||||||| | ||| ||||||||||||||||||| ||||||||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacat 26279640  T

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Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 44708291 - 44708348
Alignment:
Q  26 ctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  44708291 ctctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 44708348  T

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Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 49393099 - 49393187
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |||||| ||||| |||| | |||||||  |||||||||||   ||||||||||||||||||||||| |||| |||||||    
T  49393099 ctcatgtatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacat 49393187  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 8420353 - 8420433
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt 227  Q
    |||||||| | | |||||||  ||||||||||  | ||||||||||||||||||||||| |||||||||||| | ||||||    
T  8420353 attttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattattctttt 8420433  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 48156953 - 48157005
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 80  Q
    |||||||||||||||||||||||  ||||||||||||||||||  ||||||||    
T  48156953 ctgagggggtgcaaacagctcaacagagctgggcctccctcaatcatgggcct 48157005  T

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Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 789940 - 790031
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||| |||||||||||||| || ||||| |||| | |||||||  |||||||| || | |||||||||||  |||||||||| |||||||||    
T  789940 ggttcctcatgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaa 790031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 9878974 - 9878919
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||| ||  |||||||||||    
T  9878974 ctgagggggtgcaaacagctcaacagagctgggcctcccttaatcatgggcctcaa 9878919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 34290929 - 34290874
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  ||| ||||||||||||| | |||||||||||    
T  34290929 ctgagggggtgcaaacagctcaacagagttgggcctccctcaggcatgggcctcaa 34290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 43207529 - 43207474
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  43207529 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 43207474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 53507172 - 53507117
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  53507172 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 53507117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 25855435 - 25855519
Alignment:
Q  133 tgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||| |||||| ||||||| || | |||| ||  ||||||||||| | |||||||| |||||||||||||| ||||||||||||    
T  25855435 tgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacat 25855519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 28689458 - 28689369
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| || ||| |||||||||| | | | || ||||||||||||  | ||||||||||||||||  ||||| ||||||||||||    
T  28689458 ctcatgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacat 28689369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 50939528 - 50939468
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||| ||||||||||||||||  |||||||||||||||||   |||||||||||    
T  50939528 cgtccctgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 50939468  T

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Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 8074142 - 8074087
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||  |||||||| ||||| ||||||||||||||  ||||||||||||||||    
T  8074142 ctgagggattgcaaacaactcaatcgagctgggcctcctccaaggatgggcctcaa 8074087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 52374666 - 52374754
Alignment:
Q  130 tcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||| |||||| |||||| ||| ||| |||| ||||| ||||||| |  |||||||||| |   ||||||| ||||||||||||    
T  52374666 tcatgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacat 52374754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 6e-99; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 12596495 - 12596211
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  12596495 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggccctcaagagtgggggttcctcatgattgattttggtgtt 12596396  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  12596395 aggtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaac 12596296  T
Q  217 atcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||| ||||||          |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  12596295 atcgctcttt--aaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 12596211  T

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Target: chr7; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 10955375 - 10955588
Alignment:
Q  14 gagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggt 113  Q
    |||||||| ||||  |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10955375 gagcaggggcgtccttgagggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggt 10955474  T
Q  114 gttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatag 213  Q
    |||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||  | ||| |||||||||||||||||||||||||||    
T  10955475 gttaggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 10955574  T
Q  214 aacatcactctttt 227  Q
    |||||| |||||||    
T  10955575 aacatcgctctttt 10955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 29077200 - 29077400
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  29077200 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaa 29077299  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  29077300 aatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacgg 29077399  T
Q  303 c 303  Q
    |    
T  29077400 c 29077400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 8171661 - 8171461
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||  | ||||||||||||||||||||    
T  8171661 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 8171562  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  8171561 aatataaatagaacattgctcttttaaaaaaaatacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacgg 8171462  T
Q  303 c 303  Q
    |    
T  8171461 c 8171461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 18776884 - 18776687
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||  | ||||||||||||||||||||||||    
T  18776884 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata 18776785  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  |||||||         ||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||    
T  18776784 taaatagaacattgctcttttaaaaaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggc 18776687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 20091399 - 20091201
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  20091399 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 20091300  T
Q  207 taaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||| |||   | ||||          ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| | |||||||    
T  20091299 taaatagatcattgttttttttaaaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggc 20091201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 23551189 - 23551002
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa-aaaat 205  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||||||||||||||| | ||| |||||||||||||| |||||    
T  23551189 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaat 23551090  T
Q  206 ataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||| |||  || ||||        || |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  23551089 ataaatagatcattgctttttttaaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 23551002  T

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Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 10329528 - 10329341
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||| | ||| | || ||||||||||  | ||| ||||||||||||||||||||    
T  10329528 ttttggtgttaagtgggggtttctcatgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaata 10329429  T
Q  207 taaatagaacatcac-tcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||  | | ||||        ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  10329428 taaatagaacattgcttttttttaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 10329341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 48983962 - 48983760
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  48983962 ttttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 48983863  T
Q  207 taaatagaacatcactctttt------nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    |||||||| |||   | ||||              |||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||| | ||||    
T  48983862 taaatagatcattgttttttttaaaaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggac 48983763  T
Q  301 ggc 303  Q
    |||    
T  48983762 ggc 48983760  T

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Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 300
Target Start/End: Original strand, 26254015 - 26254171
Alignment:
Q  145 tcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt-nnnnnnnntacgtttt 243  Q
    ||||||||| || | |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||  |||||||         || |||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgtttt 26254114  T
Q  244 gattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  26254115 gattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggac 26254171  T

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Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 19692078 - 19692265
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||| | ||||| |||||||||| |  |||||||||||||| ||||||||||||||||||| |  | ||| ||||||||||||||||||||    
T  19692078 ttttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaata 19692177  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||  |||||||         |||||||||||||||||||||  | ||||||||| |||||||||||| || |||||||    
T  19692178 taaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattct 19692265  T

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Target: chr7; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 24525803 - 24525613
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||||||||||| |||  | ||| ||||||||||||||||||||    
T  24525803 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaata 24525704  T
Q  207 taaatagaacatcactctt----ttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||   | ||              ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  24525703 taaatagaacattgtttttaaaaaaaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattct 24525613  T

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Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 38414994 - 38414807
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||| | |||||||| ||||||||||  | ||| ||||||||||||||||||||    
T  38414994 ttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaata 38414895  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
     ||||||||| |  |||||||         |||||||||||||||| |||   ||||||||||| |||||| |||||||| |||||||    
T  38414894 caaatagaacgttgctcttttgcaaaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattct 38414807  T

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Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 107 - 283
Target Start/End: Complemental strand, 47985088 - 47984909
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa-aaaat 205  Q
    |||| |||||||||||||||| |||||||||| ||| ||||||||||||| | |||||||||||||||||||  | ||| ||||| |||||||| |||||    
T  47985088 tttttgtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaat 47984989  T
Q  206 ataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcc 283  Q
    |||||||||||||  || ||||           |||||||||||||||||||| | ||||||||||||||||||||||||    
T  47984988 ataaatagaacattgcttttttaaaaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagcc 47984909  T

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Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 8239669 - 8239867
Alignment:
Q  107 ttttggtgttaggtgg--gggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaa 204  Q
    ||||||||||| ||||  ||||| ||||| |||| |||| |||||||||| | | |||||||| ||||||||||  |  || ||||||| ||||||||||    
T  8239669 ttttggtgttaagtggaggggttcctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaa 8239768  T
Q  205 tataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||||| ||||||||        |||||||| ||||||||| || |||||||||||| |||||||||||||||  |||||| | |||||||    
T  8239769 tataaatagaacattactcttttaaaaaaaatacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggc 8239867  T

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Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 28749582 - 28749647
Alignment:
Q  18 agggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28749582 aggggcgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 28749647  T

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Target: chr7; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 129 - 303
Target Start/End: Original strand, 28749716 - 28749891
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactctttt- 227  Q
    |||||||||| |||||| |||||||| |||  ||||||||||||||||||  | |||||||||||||||| |||||||||||||||| ||  |||||||     
T  28749716 ctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttttg 28749814  T
Q  228 -nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
             || ||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| ||| |||||||    
T  28749815 aaaaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggc 28749891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 146 - 293
Target Start/End: Complemental strand, 33162418 - 33162270
Alignment:
Q  146 cattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttt-tnnnnnnnntacgttttg 244  Q
    ||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||  ||||||          ||||||||     
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctctttaaaaaaaaaatacgtttta 33162319  T
Q  245 attttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||| ||||||||||||| ||||||| ||||  ||| |||||||    
T  33162318 attttatcattgacctcttttcactcccagaaccgaatctccgaattct 33162270  T

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Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 25010417 - 25010607
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaa-- 204  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||           | ||| ||||||||||||||||||      
T  25010417 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcc----------accttatatttatcttttaaaaaaaa 25010506  T
Q  205 tataaatagaacatcactcttttnnnnnnnn--tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    |||||||||| |||  || ||||          ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| | ||||||    
T  25010507 tataaatagatcattgcttttttttttaaaaaatacgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacgg 25010606  T

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Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 18777084 - 18777019
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18777084 caggggcgtccctgaggaggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 18777019  T

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Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 40357368 - 40357303
Alignment:
Q  236 tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  40357368 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 40357303  T

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Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 7398452 - 7398546
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||||||||| |||||||||| |||||||| | |||||||| |  | ||||||||||||||| ||||||| ||||||||||||    
T  7398452 ggttcctcatgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacat 7398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 23859079 - 23859168
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |||||| ||||||| || | |||||| |||||||||||| ||  |||||||||||||||||||||| ||||||||||||    
T  23859079 ctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacat 23859168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 36903020 - 36902931
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||  ||| | |||||||||| |||||||||  ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  36903020 ctcatgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacat 36902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 9021896 - 9021812
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatag 213  Q
    |||||||||| |||||| |||||||||| | |||||||||||||||||||  |  |||||||||||||||||||||| |||||||    
T  9021896 ctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 2611363 - 2611269
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||||||||  || || |||||||||  |  ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 2611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 21763673 - 21763595
Alignment:
Q  139 tggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaaca 217  Q
    ||||||| |||||||| | | |||||| |||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  21763673 tggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 6765771 - 6765688
Alignment:
Q  135 tatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||| |||||||||| | | ||||| || ||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 6765688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 36891579 - 36891682
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| |||||||||| |||||| |||||||||| | | ||||||| |||||||| | |  ||||||| ||| ||||||||||||||||||||||| | ||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacattattc 36891678  T
Q  224 tttt 227  Q
    ||||    
T  36891679 tttt 36891682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 23744808 - 23744891
Alignment:
Q  135 tatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||| ||||| | || |||||||||||||||||| ||  | ||||||||||||||||||||||| ||| ||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacat 23744891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 27237524 - 27237430
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| | |||| |||||||||| ||| |  | | ||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  27237524 ggttcctcatgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 27237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 29076941 - 29076998
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcct--ccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||||    
T  29076941 ctgagggggtgcaaacagcttaaacgagcagggcctccccctcaaggatgggcctcaa 29076998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 48984133 - 48984077
Alignment:
Q  27 tctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  48984133 tctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 48984077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 10955605 - 10955664
Alignment:
Q  241 tttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||||| ||||||||| ||||    
T  10955605 tttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggac 10955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 18201161 - 18201228
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaataga 214  Q
    |||||||||  |||||||||| |||||||| |  ||||||||||||| ||||||||||| ||||||||    
T  18201161 attttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaataga 18201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 47985257 - 47985202
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  47985257 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 47985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 12981327 - 12981421
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||| ||||  ||||| |||||||||| |  ||||||||| |||||| |  | ||||||||||||||||||||||  ||||||||||||    
T  12981327 ggttcctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacat 12981421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 19691908 - 19691949
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  19691908 ctgagggggtgcaaacagctcaacagagctgggcctccctca 19691949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 20153207 - 20153296
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| || ||| ||||||| || | ||| || ||||||||||| | |  |||||||||||||||||||||| |||||| |||||    
T  20153207 ctcatgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacat 20153296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 20091565 - 20091514
Alignment:
Q  32 gggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  20091565 gggggtgcaaacagctcaatagagctgggcctccctcagtcatgggcctcaa 20091514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 24525973 - 24525918
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  ||||||||||||||| |   |||||||||||    
T  24525973 ctgagggggtgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaa 24525918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 38971270 - 38971333
Alignment:
Q  140 ggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaa 203  Q
    |||||| |||||||| | ||||||||   ||||||||||| | |||||||||||||||||||||    
T  38971270 ggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 12419536 - 12419502
Alignment:
Q  184 ttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||||||||||||||| ||||||||||||    
T  12419536 ttgtatttatcttttaaaaaatttaaatagaacat 12419502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 23551359 - 23551305
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||  |||||||||||    
T  23551359 tgagggggtgcaaacagctcaatagagttggacctccctcaatcatgggcctcaa 23551305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 40357451 - 40357413
Alignment:
Q  140 ggtagtcattttcacctctaggtgtaccgcatatatacg 178  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  40357451 ggtagtcattttcatctcttggtgtaccgcatatatacg 40357413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 38415165 - 38415108
Alignment:
Q  26 ctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||| ||||||||||||||  ||||||||||||||| |   |||||||||||    
T  38415165 ctctgaggggatgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaa 38415108  T

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Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 33 - 303
Target Start/End: Complemental strand, 30832717 - 30832447
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggttgctca 132  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  30832717 ggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtgggggttcctca 30832618  T
Q  133 tgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnn 232  Q
    || ||| |||||||||||||| |||| |||||||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||||| | |||||         
T  30832617 tgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaacatcgcgctttttaaaa 30832518  T
Q  233 nnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
       ||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||    
T  30832517 aaatacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggc 30832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 17 - 303
Target Start/End: Complemental strand, 24711208 - 24710918
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24711208 caggggcgtccctgagggggtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 24711109  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    ||||||||||| |||||||||| |||||||||||||||||||  ||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  24711108 aggtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 24711009  T
Q  217 atcactcttt----tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||              ||||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||||| |||||||    
T  24711008 atcactctttaaaaaaaaaaaaaaacgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggc 24710918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 13727522 - 13727321
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  13727522 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 13727423  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||    
T  13727422 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 13727323  T
Q  302 gc 303  Q
    ||    
T  13727322 gc 13727321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 21280528 - 21280734
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||||| |||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  21280528 ttgattttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 21280627  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||    
T  21280628 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 21280727  T
Q  302 gctctga 308  Q
    || ||||    
T  21280728 gccctga 21280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 27788807 - 27788607
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  27788807 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 27788708  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||| ||  |||||||        ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||| ||    
T  27788707 taaatagaaaattgctctttt-aaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccct 27788609  T
Q  307 ga 308  Q
    ||    
T  27788608 ga 27788607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 103 - 295
Target Start/End: Original strand, 21479477 - 21479671
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  21479477 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 21479576  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||||||  |||||||          || |||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||    
T  21479577 aatataaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 21479671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 103 - 299
Target Start/End: Original strand, 33774100 - 33774298
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||| | | |||||||||||||||||||  | ||||||||||||||||||||    
T  33774100 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 33774199  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagga 299  Q
    |||||||||||||||| ||||||||          || ||||||||||||| |||| ||||||||||||  |||||||||||||| |||||||||||||    
T  33774200 aatataaatagaacattactcttttaaaaaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattctcaagga 33774298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 103 - 301
Target Start/End: Complemental strand, 19737815 - 19737618
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||    
T  19737815 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaa 19737716  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || ||||||||||||||||| |||||||||| ||| |||||||| |||   |||||||| |||||    
T  19737715 aatataaatagaacattgctcttttaaaaaaaaaacattttgattttatcactggcctcttttca-tcctagagccgaaccttcaaattctcagggacg 19737618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 113 - 301
Target Start/End: Complemental strand, 20711833 - 20711644
Alignment:
Q  113 tgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaata 212  Q
    |||||| |||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaata 20711734  T
Q  213 gaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||  |||||||         |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  20711733 gaacattgctcttttaaaaaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacg 20711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 17353941 - 17354138
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||||| | | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  17353941 ttttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 17354040  T
Q  207 taaatagaacatcac-tcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||  | | ||||        |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| | |||||||    
T  17354041 taaatagaacattgctttttttaaaaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggc 17354138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 285
Target Start/End: Original strand, 28075770 - 28075952
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||| ||||||||||||  | ||| ||||||||||||||||||||    
T  28075770 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaata 28075869  T
Q  207 taaatagaacatcactcttt----tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctc 285  Q
    ||||||||||||  || |||    |        |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  28075870 taaatagaacattgctttttaaaataaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctc 28075952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 146 - 303
Target Start/End: Complemental strand, 27314259 - 27314101
Alignment:
Q  146 cattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt-aaaaaatataaatagaacatcactcttttnnnnnnnntacgttttg 244  Q
    |||||||||||||  ||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||||  |||||||        |||||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttttaaaaaaaatacgttttg 27314160  T
Q  245 attttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||| ||| |||||||    
T  27314159 attttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggc 27314101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 1155946 - 1155787
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttt-- 226  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||  ||||||      
T  1155946 ctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaa 1155847  T
Q  227 -tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctc 285  Q
              ||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  1155846 aaaaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctc 1155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 107 - 256
Target Start/End: Original strand, 34397844 - 34397993
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||| |||| |||| ||||||| || | |||||||||| |||| |||||||||||||||||||||  | ||||||||||||||||||||||||    
T  34397844 ttttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaata 34397943  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactg 256  Q
    ||||||||||||  |||||||        |||||||||||||||||||||    
T  34397944 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactg 34397993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 19741289 - 19741223
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19741289 cagggacgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 19741223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 235344 - 235157
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatac--gatatcttgtatttatcttttaaaaaa 204  Q
    |||||||||| |||||||||| |||||||||| |||||||||||||| || | ||||||| | ||||||||  |  | ||| ||||||||||||||||||    
T  235344 ttttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaa 235246  T
Q  205 tataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    |||||||||| |||  || |||         |||||||||||||||||||||  |||||||||||| || |||||| |||| |||||||    
T  235245 tataaatagatcattgctttttaaaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattct 235157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 21479283 - 21479349
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21479283 gcaggggcgtccctgagggggtgcaaacagctaaaacgagctgggcctccctcaaggatgggcctca 21479349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 23070943 - 23070889
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23070943 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 23070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 13727715 - 13727650
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13727715 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctca 13727650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27314834 - 27314773
Alignment:
Q  13 tgagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 74  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27314834 tgagcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 27314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 21280339 - 21280394
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 78  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21280339 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 21280394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 12083694 - 12083640
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12083694 tgagggggtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctcaa 12083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 21183777 - 21183686
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||| |||||||||| |||||| ||||||| || | |||||||| |||||||||| ||  |||||||||||||||||||||| |||||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 27579145 - 27579084
Alignment:
Q  13 tgagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 74  Q
    ||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  27579145 tgagcaggggcgtccctaagggggtgcaaccagctcaaacgagctgggcctccctcaaggat 27579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 33773900 - 33773964
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33773900 caggggcgtccctgagggggtgcaaaca-ctcaaatgagctgggcctccctcaaggatgggcctca 33773964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 6159480 - 6159536
Alignment:
Q  162 tgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  6159480 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacat 6159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 1156072 - 1156017
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  1156072 ctgagggggtgcaaacagctcaaacgagctaggtctcccttaaggatgggcctcaa 1156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 2477686 - 2477592
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||| | | |||||| |||||||||| |  | ||||||||||||||||||||||| ||||| ||||||    
T  2477686 ggttcctcatgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 2477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 20611794 - 20611888
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| | | |||  || |||||||||| | |||||||||||| |||||||||| ||| ||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacat 20611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 19986980 - 19987032
Alignment:
Q  31 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||  ||||||||||||||||||  |||||||||||    
T  19986980 agggggtgcaaacagctcaacagagctgggcctccctcaattatgggcctcaa 19987032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 17353770 - 17353825
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  17353770 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 17353825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 27788977 - 27788922
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  27788977 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 27788922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 30121783 - 30121860
Alignment:
Q  141 gtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||| |||||||||| | | |||| |||||||||| || | ||||||||||| ||||||||||| |||||| |||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacat 30121860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 19987218 - 19987322
Alignment:
Q  187 tatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctct 286  Q
    ||||||||||| |||||||||||||||| |||  || || |        ||||||||||||  |||||||||||||||||||||  |||||||| ||||     
T  19987218 tatttatctttaaaaaaatataaatagatcattgcttttcttaaaaaaatacgttttgatt--atcactgacctcttttcattctgagagccgatcctcc 19987315  T
Q  287 gaattct 293  Q
    |||||||    
T  19987316 gaattct 19987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 20712007 - 20711952
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| ||||||||||||||||  |||||||||||||||||   |||||||||||    
T  20712007 ctgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 20711952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 235519 - 235473
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    |||| |||||||||||||||||||| ||  |||||||||||||||||    
T  235519 cgtccctgagggggtgcaaacagcttaacagagctgggcctccctca 235473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 19987148 - 19987209
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccg 168  Q
    |||||||||||||||||| || || ||||||||||||  ||||||||| | | |||||||||    
T  19987148 ttttggtgttaggtggggattccttatgtatatggtaaccattttcacatttgggtgtaccg 19987209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 24 - 301
Target Start/End: Original strand, 3952906 - 3953182
Alignment:
Q  24 gtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtggg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3952906 gtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtggg 3953005  T
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| |||||| ||| |||| |||||||||||||| |||||||||||| ||||||  | |||||||||||||||||||||||||||||||||||||  ||    
T  3953006 ggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaatagaacatcggtc 3953105  T
Q  224 ttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
     |||        ||| |||||||||||||||||||||||||||||| ||| |||||||||||  |||||||| |||||    
T  3953106 -tttaaaaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacg 3953182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 7162677 - 7162968
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7162677 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 7162776  T
Q  117 aggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaac 216  Q
    |||| |||||| ||||| |||| |||||||||||||||||||  || |||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  7162777 aggtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 7162876  T
Q  217 atcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 308  Q
    ||| |||||||         || |||| |||||||||||| ||||||||||||||| |||| ||||||  ||| ||||| ||||||| ||||    
T  7162877 atcgctcttttaaaaaaaagacattttaattttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctga 7162968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 103 - 309
Target Start/End: Original strand, 4505873 - 4506080
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  4505873 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 4505972  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||    
T  4505973 aatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacg 4506072  T
Q  302 gctctgag 309  Q
    || |||||    
T  4506073 gccctgag 4506080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 29939981 - 29939786
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| | |||||||||||||| |||||||||    
T  29939981 ttttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaata 29939882  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||  |||||||        |||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||    
T  29939881 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacgg 29939786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 3155196 - 3155397
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  3155196 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 3155295  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    ||||||||||||||||  |||||||         || ||||| |||||||||||||||||||||||||   | ||||||||||| ||||||||| |||||    
T  3155296 aatataaatagaacattgctcttttaaaaaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacg 3155395  T
Q  302 gc 303  Q
    ||    
T  3155396 gc 3155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 6964986 - 6965185
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  |  |||||||||||||||||||    
T  6964986 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaa 6965085  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        |   ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||    
T  6965086 aatataaatagaacattgctcttttaaaaaaaat-tattttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacgg 6965184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 8907202 - 8907008
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||    ||||||||||||||||||||    
T  8907202 ttgattttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaa 8907103  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    |||||||||||||||| ||||||||          || |||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||    
T  8907102 aatataaatagaacattactcttttaaaaaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctca 8907008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 12337571 - 12337369
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| |||||||| || | ||||||||||||||||||||    
T  12337571 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaa 12337472  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||||||  |||||||          ||  ||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||| ||||    
T  12337471 aatataaatagaacattgctcttttaaaaaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggac 12337372  T
Q  301 ggc 303  Q
    |||    
T  12337371 ggc 12337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 40636164 - 40636321
Alignment:
Q  150 ttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgatttt 249  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||        || |||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatatgttttgatttt 40636263  T
Q  250 atcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctg 307  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  40636264 atcactggcctcttttcattcccagagctgagcctccgaattctcagggacggctctg 40636321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 27506859 - 27506658
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||| ||| ||||||||||  ||||||||||| |||| | |||||||| ||||||||||  | ||| ||||||||||||||||||||    
T  27506859 ttttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaata 27506760  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    |||||||| |||  || ||||        ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| | ||||||| ||    
T  27506759 taaatagatcattgcttttttttaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccct 27506660  T
Q  307 ga 308  Q
    ||    
T  27506659 ga 27506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 26716111 - 26716289
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt-aaaaaat 205  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||| |  | ||| |||||||||||| |||||||    
T  26716111 tttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaat 26716210  T
Q  206 ataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcc 283  Q
    |||||||||||||  |||||||         |||||||||||||||||||||||||||||||||||||| |||||||||    
T  26716211 ataaatagaacattgctcttttaaaaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagcc 26716289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 283
Target Start/End: Original strand, 9046012 - 9046189
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatctttt-aaaaaat 205  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| |||||||||||| |||||||    
T  9046012 tttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaat 9046111  T
Q  206 ataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcc 283  Q
    |||||||||||||   ||||||        ||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  9046112 ataaatagaacattgttcttttaaaaacaatacgttttgattttatcactggcctcttttaattcccagagctgagcc 9046189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 10762683 - 10762489
Alignment:
Q  108 tttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatat 207  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||| |||||||||   | ||| |||||||||||||||||||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatat 10762584  T
Q  208 aaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||||||  ||| |||         ||||||| |||||||||||| |||||||||||||||||||| |||||||  |||||| | |||||||    
T  10762583 aaatagaacattgctc-tttaaaaaaaaaacgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggc 10762489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 24410419 - 24410624
Alignment:
Q  107 ttttggtgttaggtggggg-ttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaat 205  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| |||||||||||||||||||    
T  24410419 ttttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaat 24410518  T
Q  206 ataaatagaacatcactcttt---tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    |||||||||||||   | |||            ||||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||| | ||||||    
T  24410519 ataaatagaacattgttttttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacgg 24410618  T
Q  303 ctctga 308  Q
    | ||||    
T  24410619 ccctga 24410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 303
Target Start/End: Original strand, 34693991 - 34694154
Alignment:
Q  140 ggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacg 239  Q
    |||||||||||| |||||| |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||  |||||||        ||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacg 34694090  T
Q  240 ttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||| | |||||||||||| ||||| |||| |||| ||||||||| |||||||    
T  34694091 ttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggc 34694154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 140 - 303
Target Start/End: Original strand, 34716403 - 34716566
Alignment:
Q  140 ggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacg 239  Q
    |||||||||||| |||||| |||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||  |||||||        ||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaatacg 34716502  T
Q  240 ttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||| | |||||||||||| ||||| |||| |||| ||||||||| |||||||    
T  34716503 ttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggc 34716566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 301
Target Start/End: Complemental strand, 5952791 - 5952642
Alignment:
Q  150 ttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgatttt 249  Q
    ||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||  |||| |||||  |||||||        ||||||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata--aatataacattgctcttttaaaaaaaatacgttttgatttt 5952694  T
Q  250 atcactgacctcttttcattcccagagccgagcctctgaattctcaaggacg 301  Q
    |||| || |||||||||||||| |||||||| |||| ||||||||| |||||    
T  5952693 atcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 3155003 - 3155068
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3155003 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3155068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 6964798 - 6964857
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6964798 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 6964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 12337756 - 12337689
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12337756 gcaggggcgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 12337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 4505679 - 4505744
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4505679 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaatgatgggcctca 4505744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 34693147 - 34693212
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34693147 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 34715559 - 34715624
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34715559 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34715624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 16097008 - 16097102
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| | |||||||  ||||||||||  | ||||||||||||||||||||||| ||||||||||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 16097102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 24035642 - 24035553
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||  |||||| |||||||||| |||||||| ||||| ||||||  | ||||||||||||||||||||||| ||||||||||||    
T  24035642 ctcatgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 24035553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 28425812 - 28425718
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||| ||||||||||| |||||||| | | ||||||| |||||||||||| | ||||||||||||||||||||  | ||||||||||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacat 28425718  T

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Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 38400798 - 38400892
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| |   |||| |||||||||| || | ||||||||||||||||||||||| ||||||||||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacat 38400892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 1396730 - 1396625
Alignment:
Q  195 ttttaaaaaatataaatagaacatcactcttttnnnnnnnnt-acgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattct 293  Q
    ||||||||||||||||||||||||  |||||||        | | |||||||||||||||||| |||||||||||| |||||| |||||||| |||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T
Q  294 caagga 299  Q
    ||||||    
T  1396630 caagga 1396625  T

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Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 40635963 - 40636028
Alignment:
Q  18 agggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40635963 aggggcgtccctaagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcttcaa 40636028  T

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Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 8327681 - 8327785
Alignment:
Q  187 tatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctct 286  Q
    |||||||||||||||||||||||||||| |||  || ||||        |||||||||||||||||||||| ||||||||||| ||||| | |||||||     
T  8327681 tatttatcttttaaaaaatataaatagatcattgcttttttaaaaaaaatacgttttgattttatcactgatctcttttcatttccagaactgagcctcc 8327780  T
Q  287 gaatt 291  Q
    |||||    
T  8327781 gaatt 8327785  T

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Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 3399521 - 3399572
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 80  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3399521 tgagggggtgcaaacagctcaaacgagttggacctccctcaaggatgggcct 3399572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 16227462 - 16227379
Alignment:
Q  132 atgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||||||| ||||| ||||||| || | |||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||    
T  16227462 atgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 16227379  T

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Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21665802 - 21665708
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||| | | | |||| | ||||||||||| | | ||||||||||||||||||||| ||||||||||||    
T  21665802 ggttcctcatgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacat 21665708  T

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Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 41213982 - 41213928
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  41213982 tgagggggtgcaaacagcttaaacgagctgggtctccctcgaggatgggcctcaa 41213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 8907389 - 8907330
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||||| |||||| ||||    
T  8907389 cgtccctgagggggtgcaaacagctcaaacaagctggacctccctcaaagatgggtctca 8907330  T

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Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 13800647 - 13800552
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctagg-tgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||| ||||||| ||||| |||||||||| | || |||| ||||||||||||  | ||| ||||||||||||||||||| ||||||||||||    
T  13800647 ggttcctcgtgtatatagtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacat 13800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 12134134 - 12134048
Alignment:
Q  132 atgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||| |||||| |||||||| | | |||||| |||||||||||| || |||||||||||||||||||   | ||||||||||||    
T  12134134 atgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacat 12134048  T

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Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 27507035 - 27506975
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  27507035 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 27506975  T

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Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 9045843 - 9045898
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  9045843 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 9045898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 26715942 - 26715997
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  26715942 ctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 26715997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 42029168 - 42029239
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |||||||||  ||| |||| || | ||| ||||||||||||||||||| ||||||||||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacat 42029239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 22727598 - 22727550
Alignment:
Q  130 tcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacg 178  Q
    |||||||||||||||| |||||||| | | |||||||||||||||||||    
T  22727598 tcatgtatatggtagtgattttcacttttgggtgtaccgcatatatacg 22727550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 24410250 - 24410302
Alignment:
Q  31 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  24410250 agggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 24410302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 64
Target Start/End: Complemental strand, 5952980 - 5952949
Alignment:
Q  33 ggggtgcaaacagctcaaacgagctgggcctc 64  Q
    ||||||||||||||||||||||||||||||||    
T  5952980 ggggtgcaaacagctcaaacgagctgggcctc 5952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 7742212 - 7742141
Alignment:
Q  148 ttttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa-aaaatataaatagaacat 218  Q
    ||||||||| | | |||| |||||||||| || |  ||||||||||||||||| ||||||||||||||||||    
T  7742212 ttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacat 7742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 10762854 - 10762799
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||| ||||||||||||||  ||||||||| ||||||||  |||||||||||    
T  10762854 ctgaggggatgcaaacagctcaacagagctgggcttccctcaatcatgggcctcaa 10762799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 37182670 - 37182739
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttat 193  Q
    |||| |||||||||| |||||| |||||||| | | ||||||  |||||||||||| | |||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 22727497 - 22727465
Alignment:
Q  186 gtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||||||||||||| ||||||||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacat 22727465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 5e-93; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 16 - 303
Target Start/End: Complemental strand, 37430368 - 37430080
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgt 115  Q
    |||||| ||||  ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  37430368 gcaggggcgtccttgagggggtgcaaacagctcaaacgagttgggccttccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 37430269  T
Q  116 taggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    || ||| ||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  37430268 tacgtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 37430169  T
Q  216 catcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||| |||||||          |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||    
T  37430168 catcgctcttttaaaaaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggc 37430080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 13534809 - 13534610
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  13534809 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaa 13534711  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  13534710 aatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacgg 13534611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 13624349 - 13624150
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  13624349 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaa 13624251  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||  |||||||        ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  13624250 aatataaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacgg 13624151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 45475801 - 45475989
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||||||||||||||||||||||||    
T  45475801 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaata 45475900  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||  |||||||        ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  45475901 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattctca 45475989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 30883309 - 30883511
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||  |  |||||||||||||||||||    
T  30883309 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaa 30883408  T
Q  203 aatataaatagaacatcactctttt--nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    ||||||||||||||||  |||||||          || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  30883409 aatataaatagaacattgctcttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggac 30883508  T
Q  301 ggc 303  Q
    |||    
T  30883509 ggc 30883511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 23606748 - 23606547
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| |||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  23606748 ttttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 23606649  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctct 306  Q
    ||||||||||||  |||||||        |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| | ||||||| ||    
T  23606648 taaatagaacattgctcttttaaaaaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccct 23606549  T
Q  307 ga 308  Q
    ||    
T  23606548 ga 23606547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 41879161 - 41879360
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||| | | ||||||||||||||||| || ||||||||||||||||||||    
T  41879161 ttgattttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaa 41879260  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    ||||||||||||||||   ||||||        |||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  41879261 aatataaatagaacattgttctttt-aaaaaaatacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacgg 41879359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 103 - 303
Target Start/End: Complemental strand, 2952344 - 2952141
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||  |  |||||||||||||||||||    
T  2952344 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaa 2952245  T
Q  203 aatataaatagaacatcactctttt---nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaagga 299  Q
    ||||||||||||||||  |||||||           || |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||    
T  2952244 aatataaatagaacattgctctttttaaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 2952145  T
Q  300 cggc 303  Q
    ||||    
T  2952144 cggc 2952141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 5860867 - 5860672
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  5860867 ttgattttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 5860768  T
Q  203 aatataaatagaacatcactcttt---tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||||||||  ||||||            || ||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||    
T  5860767 aatataaatagaacattgctctttaaaaataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattctca 5860672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 107 - 300
Target Start/End: Original strand, 10917375 - 10917568
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  10917375 ttttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 10917474  T
Q  207 taaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggac 300  Q
    |||||||| |||   | ||||        ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  10917475 taaatagatcattgttttttttaaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaaggac 10917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 107 - 308
Target Start/End: Complemental strand, 23798380 - 23798178
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| | | |||||||||||||||||||  | ||| ||||||||||||||||||||    
T  23798380 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaata 23798281  T
Q  207 taaatagaacatcactcttt-tnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctc 305  Q
    ||||||||||||  ||||||          |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| | ||||||| |    
T  23798280 taaatagaacattgctctttaaaaaaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccc 23798181  T
Q  306 tga 308  Q
    |||    
T  23798180 tga 23798178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 103 - 295
Target Start/End: Complemental strand, 3048640 - 3048447
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||||||||    
T  3048640 ttgattttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaa 3048541  T
Q  203 aatataaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctca 295  Q
    ||||||||||| | ||  |||||||         || |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||    
T  3048540 aatataaatagtatattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattctca 3048447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 20003942 - 20003839
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgtt 116  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20003942 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 20003843  T
Q  117 aggt 120  Q
    ||||    
T  20003842 aggt 20003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 42600766 - 42600963
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||| ||||||||||  | ||| ||||||||||||||||||||    
T  42600766 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaata 42600865  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    |||||||| |||  || ||||          |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| | |||||||    
T  42600866 taaatagatcattgcttttttaaaaaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggc 42600963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 3048840 - 3048774
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3048840 gcaggggcgtttctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3048774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 2952538 - 2952473
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2952538 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 2952473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 5861061 - 5860996
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5861061 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 5860996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 30883110 - 30883175
Alignment:
Q  17 cagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 82  Q
    ||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30883110 caggggcgtccctgagtgggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 30883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 5942697 - 5942777
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaa 204  Q
    |||| |||||||||| |||||| |||||||||| | ||||||||||| |||||||| ||||||||||||||||||||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 41677276 - 41677181
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa-aaaatataaatagaacat 218  Q
    |||| ||||||||||  ||||| |||||||||| ||| |||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||||||    
T  41677276 ggttcctcatgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacat 41677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 8102913 - 8103007
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||| | |||||||||| ||||||||||||||||||||   | ||||||||||||||||||||||| |||||| |||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacat 8103007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 11290185 - 11290279
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||| |||||| |||||||||| |  ||||||  ||||||||||| | ||||||||||||||||||||||| |||||| |||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacat 11290279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 34789959 - 34789869
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatc 219  Q
    |||||||||| |||||| |||||||||| | |||||||  ||||||||||| |||||||||||||||||||| | || |||||||||||||    
T  34789959 ctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatc 34789869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 20003799 - 20003732
Alignment:
Q  236 tacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||| |||||||    
T  20003799 tacgttttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggc 20003732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 285
Target Start/End: Complemental strand, 5973209 - 5973048
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| ||| |||||| |||| | ||||||| || | |||||||  ||||||||||| | ||||||||||||||||||||||| ||||||||||||   ||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttc 5973110  T
Q  224 ttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctc 285  Q
    ||||        ||| |||| ||||||| || ||||||||||||||  ||||||| ||||||    
T  5973109 ttttaaaacgaatacatttttattttattacagacctcttttcatttacagagccaagcctc 5973048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 45472202 - 45472257
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  45472202 ctgagggggtgcaaacagctcaaccgagctgggccacccccaaggatgggcctcaa 45472257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 7944624 - 7944530
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| | |||||||  ||||||||||  | ||||||||||| ||||||||||| |||||| |||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacat 7944530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 8646250 - 8646300
Alignment:
Q  168 gcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  8646250 gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacat 8646300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 39332507 - 39332413
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||| | | |||||||| |||||| || | |||||||||||||||| |||||  ||||||||||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacat 39332413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 41878177 - 41878231
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  41878177 tgagggggtgcaaacagctcaaacgagttgagcctccctcaaggatgagcctcaa 41878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 15167517 - 15167423
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| | |||| |||||||| | | |||||| ||||||||||| | |  || ||||||||||||||||||| ||||||||||||    
T  15167517 ggttcctcatgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacat 15167423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 42600590 - 42600650
Alignment:
Q  23 cgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  42600590 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 42600650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 30674482 - 30674411
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |  ||||| ||||||||||||| | ||| |||||||||||||||| || ||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacat 30674411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 5721560 - 5721654
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||| ||||| |||||| |||||||| | | |||||||||  |||||| |  | ||||||||||||||||||||||  ||||||||||||    
T  5721560 ggttcctcaggtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 10917206 - 10917246
Alignment:
Q  29 tgagggggtgcaaacagctcaaacgagctgggcctccctca 69  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  10917206 tgagggggtgcaaacagctcaacagagctgggcctccctca 10917246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 284
Target Start/End: Original strand, 15078759 - 15078919
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| |||||||||| | |||| |||||||| | | ||||||  ||||||||||   | ||| ||||||||||||||||| | |||||||||||| | ||    
T  15078759 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacattattc 15078858  T
Q  224 ttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcct 284  Q
    ||||        |||||||| ||||||| || ||| |||||||| |  |||||| ||||||    
T  15078859 ttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagcct 15078919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 9108553 - 9108588
Alignment:
Q  183 cttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9108553 cttgtatttatcttttaaaaaatttaaatagaacat 9108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 23606910 - 23606855
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  23606910 ctgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaa 23606855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 23941170 - 23941099
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||| || | |||||| ||| |||||| || | ||||||||||||||||||||||| |||||| |||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacat 23941099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 34868220 - 34868185
Alignment:
Q  183 cttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34868220 cttgtatttatcttttaaaaaatttaaatagaacat 34868185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 45294648 - 45294597
Alignment:
Q  14 gagcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctcc 65  Q
    |||||||| ||||  |||||||||||||||||||| || |||||||||||||    
T  45294648 gagcagggccgtccttgagggggtgcaaacagctctaatgagctgggcctcc 45294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 14510084 - 14509991
Alignment:
Q  124 ggttgctcatgtatatggtagtcatttt-cacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| ||||| ||| | | |||||||||  ||||||||| | ||| ||||| ||||||||||||| ||||| ||||||    
T  14510084 ggttactcatgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacat 14509991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 103 - 303
Target Start/End: Original strand, 1323 - 1523
Alignment:
Q  103 ttgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaa 202  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||  | ||||||||||||||||||||    
T  1323 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaa 1422  T
Q  203 aatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacgg 302  Q
    |||||||||||||||   |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  1423 aatataaatagaacagtgctcttttaaaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacgg 1522  T
Q  303 c 303  Q
    |    
T  1523 c 1523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 1010 - 1077
Alignment:
Q  16 gcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1010 gcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 106522 - 106719
Alignment:
Q  107 ttttggtgttaggtgggggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata 206  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||    
T  106522 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaata 106621  T
Q  207 taaatagaacatcactctttt-nnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||   ||||||         ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| | |||||||    
T  106622 taaatagaacattgttcttttaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggc 106719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 106390 - 106445
Alignment:
Q  28 ctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 83  Q
    ||||| |||||||||||||||||  |||||||||||||||||   |||||||||||    
T  106390 ctgagagggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 106445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 5e-44; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 181851 - 181969
Alignment:
Q  55 gctgggcctccctcaaggatgggcctcaagagtggaggttcctcatgattgattttggtgttaggtgggggttgctcatgtatatggtagtcattttcac 154  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||    
T  181851 gctgggcctccctcaaggatgggtctcaagagtgggggttcctcatgattgattttggtgttagatgggggttcctcatgtatacggtagtcattttcac 181950  T
Q  155 ctctaggtgtaccgcatat 173  Q
    |||| | ||||||||||||    
T  181951 ctctggatgtaccgcatat 181969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 183106 - 183240
Alignment:
Q  169 catatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactcttttnnnnnnnntacgttttgattttatcactgacctcttttcat 268  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||        |||||||| |||||||||||| |||||||||||    
T  183106 catatatacgatactttgtatttatcttttaaaaaatataaatagaacatctctcttttaaaaaaaatacgttttaattttatcactggcctcttttcat 183205  T
Q  269 tcccagagccgagcctctgaattctcaaggacggc 303  Q
    ||||||||||||||||||||||| ||| |||||||    
T  183206 tcccagagccgagcctctgaattttcagggacggc 183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 181433 - 181480
Alignment:
Q  15 agcagggacgtctctgagggggtgcaaacagctcaaacgagctgggcc 62  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  181433 agcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcc 181480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 354 - 266
Alignment:
Q  130 tcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||| |||||| |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  354 tcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 206591 - 206497
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||||||||| |||||| |||||||||  | |||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacat 206497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 173612 - 173518
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| |||| ||||| |||||| ||||| |||| | |||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  173612 ggttcctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacat 173518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 38926 - 39020
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||| ||||| |||| |||||| |||||||| | |  ||||| ||||||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 39020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 24072 - 24004
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaa 215  Q
    |||||||| | | |||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  24072 attttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 24004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 230956 - 230867
Alignment:
Q  129 ctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacat 218  Q
    |||||||||| |||||| |||||||||| | ||| || ||||||||||| | | |||  ||||||||||||| |||| ||||||||||||    
T  230956 ctcatgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacat 230867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 284
Target Start/End: Original strand, 1355 - 1515
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaatataaatagaacatcactc 223  Q
    |||| |||||||||| | |||| |||||||| | | ||||||  ||||||||||   | ||| ||||||||||||||||| | |||||||||||| | ||    
T  1355 ggttcctcatgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacattattc 1454  T
Q  224 ttttnnnnnnnntacgttttgattttatcactgacctcttttcattcccagagccgagcct 284  Q
    ||||        |||||||| ||||||| || ||| |||||||| |  |||||| ||||||    
T  1455 ttttaaaaaaaatacgtttttattttattacggacttcttttcacttacagagcagagcct 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 16028 - 16095
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtattt 191  Q
    |||| |||||||||| |||||| ||||||| || | | ||||||||||| |||||| |||||||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgtattt 16095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 16125 - 16160
Alignment:
Q  183 cttgtatttatcttttaaaaaatataaatagaacat 218  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16125 cttgtatttatcttttaaaaaatttaaatagaacat 16160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 40086 - 40182
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata--taaatagaacat 218  Q
    ||||||||||||||| | | || ||||||||||   |||||||  |||| |||||  | |||||||||||||||||||||| |  ||||||||||||    
T  40086 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacat 40182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 138146 - 138242
Alignment:
Q  124 ggttgctcatgtatatggtagtcattttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaaaaaata--taaatagaacat 218  Q
    ||||||||||||||| | | || ||||||||||   |||||||  |||| |||||  | |||||||||||||||||||||| |  ||||||||||||    
T  138146 ggttgctcatgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacat 138242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  147 attttcacctctaggtgtaccgcatatatacgatatcttgtatttatcttttaa 200  Q
    |||||||||| | |||||||  ||||||||||| | ||||||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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