View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20966_low_45 (Length: 220)
Name: NF20966_low_45
Description: NF20966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20966_low_45 |
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Alignment Details
Target: chr1 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11404918 - 11404793
Alignment:
| Q |
1 |
tcccatgcctttaagagaaactaattaatgctttctaataaggaaagaatctggtggaaagaatgaaacgcaagtattgggaatcatacataacagttat |
100 |
Q |
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| T |
11404918 |
tcccatgcctttaagagaaactaattaatgctttctaataaagaaagaatctggtggaaagaatgaaacgcaagtattgggaatcatacataacagttat |
11404819 |
T |
|
| Q |
101 |
caaacccattacaaggttcacactac |
126 |
Q |
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|||||||||||||||||||||||||| |
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| T |
11404818 |
caaacccattacaaggttcacactac |
11404793 |
T |
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