View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20969_high_19 (Length: 250)
Name: NF20969_high_19
Description: NF20969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20969_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41621330 - 41621569
Alignment:
| Q |
1 |
accttccctttgtggacctcaaaagcttgagcacaaaatattgtttttgtgctaacatattggccatatttgttcctaatgcaggttcccaatcccatgc |
100 |
Q |
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| T |
41621330 |
accttccctttgtggacctcaaaagcttgagcacaaaatattgtttttgtgctaacatattggccatatttgttcctaatgcaggttcccaatcccatgc |
41621429 |
T |
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| Q |
101 |
ctcctatatcgcatgagaatgcaacatcagtattgcatttcacaaacctgccagtggcttcgaccaatgtgtggtctgcattctgtcatttgtgatatgc |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41621430 |
ctcctatatcgtatgagaatgcaacatcagtattgcatttcacaaacctgctagtggcttcgaccaatgtgtggtctgcattctgtcatttgtgatatgc |
41621529 |
T |
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| Q |
201 |
ctgcttagagctgcaacattgccttctgtttttgcctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
41621530 |
ctgcttagagctgcaacattgccttctgtttttgcctttg |
41621569 |
T |
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