View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20969_low_7 (Length: 375)

Name: NF20969_low_7
Description: NF20969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20969_low_7
NF20969_low_7
[»] chr5 (26 HSPs)
chr5 (6-360)||(42924847-42925199)
chr5 (6-136)||(38879573-38879701)
chr5 (6-136)||(43334194-43334322)
chr5 (6-80)||(24448936-24449008)
chr5 (8-79)||(27328799-27328870)
chr5 (6-136)||(32703416-32703540)
chr5 (6-79)||(7097777-7097848)
chr5 (6-80)||(12006345-12006419)
chr5 (7-79)||(43574653-43574723)
chr5 (12-79)||(2838825-2838890)
chr5 (9-79)||(22600501-22600569)
chr5 (6-79)||(4619121-4619194)
chr5 (6-79)||(13801784-13801857)
chr5 (6-66)||(16957374-16957432)
chr5 (8-64)||(10306493-10306548)
chr5 (89-136)||(209023-209070)
chr5 (13-79)||(8170008-8170072)
chr5 (1-79)||(19142955-19143031)
chr5 (6-136)||(41014311-41014436)
chr5 (9-71)||(12575680-12575741)
chr5 (6-79)||(16880664-16880735)
chr5 (6-36)||(18684361-18684391)
chr5 (6-40)||(25622544-25622578)
chr5 (6-79)||(34154831-34154902)
chr5 (6-40)||(39801600-39801634)
chr5 (6-42)||(13774947-13774983)
[»] scaffold0057 (3 HSPs)
scaffold0057 (6-136)||(46823-46949)
scaffold0057 (8-79)||(46726-46796)
scaffold0057 (6-79)||(24789-24860)
[»] chr1 (47 HSPs)
chr1 (6-135)||(35005139-35005266)
chr1 (6-136)||(14617053-14617179)
chr1 (6-79)||(18741974-18742047)
chr1 (6-136)||(10668240-10668368)
chr1 (6-136)||(27201662-27201790)
chr1 (6-79)||(42304224-42304297)
chr1 (6-136)||(9939476-9939605)
chr1 (6-136)||(46247970-46248096)
chr1 (6-79)||(4349708-4349779)
chr1 (9-79)||(18944713-18944783)
chr1 (6-79)||(23768337-23768408)
chr1 (6-79)||(47214579-47214650)
chr1 (6-69)||(45402176-45402237)
chr1 (6-77)||(20004107-20004178)
chr1 (6-136)||(46991819-46991945)
chr1 (11-128)||(25468285-25468398)
chr1 (6-136)||(30395743-30395871)
chr1 (6-79)||(35117782-35117856)
chr1 (18-79)||(19932782-19932843)
chr1 (6-79)||(22324962-22325034)
chr1 (10-134)||(32632578-32632697)
chr1 (13-136)||(20036235-20036355)
chr1 (6-80)||(6925169-6925241)
chr1 (6-77)||(19701642-19701712)
chr1 (6-76)||(23796538-23796606)
chr1 (1-40)||(33594143-33594182)
chr1 (6-136)||(34725115-34725239)
chr1 (6-136)||(38478299-38478423)
chr1 (8-79)||(50812010-50812079)
chr1 (6-80)||(19974091-19974164)
chr1 (6-79)||(35253204-35253275)
chr1 (6-79)||(6358191-6358263)
chr1 (6-63)||(50606487-50606544)
chr1 (9-136)||(11596528-11596650)
chr1 (6-69)||(27474360-27474421)
chr1 (8-79)||(43768209-43768278)
chr1 (1-79)||(12126849-12126925)
chr1 (9-79)||(15505634-15505702)
chr1 (6-136)||(45812554-45812678)
chr1 (6-75)||(1517328-1517395)
chr1 (6-79)||(10378752-10378823)
chr1 (11-77)||(27136673-27136738)
chr1 (9-79)||(31442409-31442478)
chr1 (6-76)||(45264416-45264485)
chr1 (4-80)||(18335303-18335377)
chr1 (2-51)||(50548543-50548592)
chr1 (8-75)||(31382233-31382298)
[»] chr8 (32 HSPs)
chr8 (6-128)||(389643-389763)
chr8 (6-136)||(44530141-44530267)
chr8 (1-135)||(44781516-44781648)
chr8 (6-136)||(20284086-20284216)
chr8 (6-79)||(29521702-29521773)
chr8 (6-79)||(35261726-35261797)
chr8 (6-79)||(21070714-21070787)
chr8 (6-136)||(12670267-12670391)
chr8 (1-136)||(26954124-26954258)
chr8 (6-136)||(28817643-28817769)
chr8 (6-136)||(36720788-36720914)
chr8 (6-133)||(39461011-39461136)
chr8 (10-79)||(2626569-2626636)
chr8 (6-136)||(7136544-7136672)
chr8 (10-79)||(13160748-13160815)
chr8 (6-79)||(29877141-29877212)
chr8 (6-79)||(16225066-16225139)
chr8 (6-70)||(16013510-16013574)
chr8 (6-79)||(5689678-5689749)
chr8 (6-75)||(40604923-40604989)
chr8 (10-79)||(45071311-45071378)
chr8 (7-79)||(8483956-8484026)
chr8 (8-80)||(8897783-8897853)
chr8 (6-79)||(20869970-20870043)
chr8 (6-134)||(6760816-6760942)
chr8 (29-80)||(28873244-28873292)
chr8 (9-79)||(5135309-5135377)
chr8 (9-79)||(24365079-24365147)
chr8 (6-136)||(30454114-30454238)
chr8 (6-79)||(12625937-12626008)
chr8 (29-79)||(43942371-43942421)
chr8 (6-38)||(27468109-27468141)
[»] chr6 (17 HSPs)
chr6 (9-136)||(12221935-12222060)
chr6 (6-136)||(29355872-29356000)
chr6 (6-69)||(12885968-12886031)
chr6 (6-136)||(2166427-2166555)
chr6 (6-136)||(2178060-2178188)
chr6 (6-79)||(25557770-25557841)
chr6 (6-136)||(1346956-1347080)
chr6 (6-136)||(1354774-1354898)
chr6 (2-69)||(3116142-3116209)
chr6 (1-79)||(7947383-7947460)
chr6 (6-79)||(26097205-26097276)
chr6 (4-69)||(32579482-32579545)
chr6 (8-136)||(18277212-18277336)
chr6 (7-79)||(24734689-24734760)
chr6 (8-40)||(29016301-29016333)
chr6 (6-76)||(9161172-9161242)
chr6 (6-40)||(10734922-10734956)
[»] chr3 (39 HSPs)
chr3 (6-136)||(13628807-13628935)
chr3 (8-136)||(8247706-8247832)
chr3 (8-136)||(46421054-46421180)
chr3 (6-135)||(54374362-54374488)
chr3 (1-136)||(29366732-29366865)
chr3 (6-79)||(6411839-6411910)
chr3 (6-136)||(40272829-40272955)
chr3 (9-136)||(45139497-45139621)
chr3 (10-79)||(10795444-10795513)
chr3 (6-79)||(45786231-45786304)
chr3 (6-134)||(53996582-53996707)
chr3 (6-77)||(54484762-54484831)
chr3 (6-136)||(5173736-5173863)
chr3 (5-79)||(9607272-9607346)
chr3 (6-79)||(39203583-39203654)
chr3 (6-79)||(353366-353439)
chr3 (6-135)||(34420660-34420786)
chr3 (6-136)||(516423-516552)
chr3 (1-79)||(7943059-7943135)
chr3 (10-136)||(22609780-22609901)
chr3 (6-76)||(829459-829528)
chr3 (6-136)||(13730619-13730747)
chr3 (6-79)||(34771381-34771452)
chr3 (7-76)||(52926237-52926304)
chr3 (6-79)||(14987026-14987099)
chr3 (6-127)||(45948855-45948972)
chr3 (6-79)||(49013490-49013563)
chr3 (6-128)||(1217112-1217228)
chr3 (10-128)||(12914056-12914170)
chr3 (1-79)||(16735509-16735585)
chr3 (7-66)||(25944551-25944609)
chr3 (9-79)||(26869775-26869843)
chr3 (6-79)||(15797289-15797360)
chr3 (6-79)||(22122934-22123005)
chr3 (6-79)||(26573196-26573267)
chr3 (6-79)||(31592916-31592987)
chr3 (8-79)||(9276333-9276401)
chr3 (8-52)||(10300585-10300629)
chr3 (6-69)||(25517187-25517248)
[»] chr2 (36 HSPs)
chr2 (6-136)||(10543690-10543818)
chr2 (2-79)||(31158452-31158529)
chr2 (9-128)||(17380257-17380371)
chr2 (9-128)||(32781308-32781423)
chr2 (6-136)||(10546154-10546281)
chr2 (6-80)||(30826082-30826153)
chr2 (6-79)||(9671226-9671297)
chr2 (6-136)||(14530310-14530438)
chr2 (3-77)||(19185757-19185831)
chr2 (6-136)||(8455333-8455459)
chr2 (6-76)||(11514486-11514553)
chr2 (6-136)||(21779278-21779402)
chr2 (6-136)||(24200640-24200768)
chr2 (6-79)||(25249755-25249826)
chr2 (6-74)||(99282-99348)
chr2 (6-136)||(14444721-14444846)
chr2 (6-80)||(19977731-19977803)
chr2 (6-136)||(25079734-25079861)
chr2 (6-80)||(5841074-5841148)
chr2 (6-79)||(36871539-36871609)
chr2 (89-134)||(29419985-29420030)
chr2 (6-69)||(24860005-24860066)
chr2 (1-79)||(17623611-17623687)
chr2 (6-136)||(17667994-17668120)
chr2 (6-80)||(17896306-17896378)
chr2 (6-69)||(23488538-23488601)
chr2 (6-76)||(44643573-44643641)
chr2 (6-136)||(7214526-7214654)
chr2 (89-127)||(13245182-13245220)
chr2 (89-135)||(23145794-23145840)
chr2 (89-135)||(23557584-23557630)
chr2 (6-40)||(34766339-34766373)
chr2 (6-79)||(39914323-39914393)
chr2 (1-77)||(24890460-24890534)
chr2 (8-80)||(31821362-31821432)
chr2 (6-77)||(27573669-27573738)
[»] chr4 (47 HSPs)
chr4 (6-136)||(54730241-54730370)
chr4 (6-136)||(44363147-44363275)
chr4 (6-79)||(20639675-20639747)
chr4 (6-79)||(23501834-23501907)
chr4 (7-136)||(6430644-6430768)
chr4 (6-136)||(16911554-16911682)
chr4 (1-136)||(5648251-5648381)
chr4 (6-80)||(14983880-14983952)
chr4 (6-136)||(20224976-20225100)
chr4 (6-77)||(20908653-20908723)
chr4 (6-69)||(30352597-30352660)
chr4 (10-136)||(40915821-40915942)
chr4 (19-136)||(5306694-5306806)
chr4 (6-136)||(16408618-16408746)
chr4 (6-80)||(21647010-21647084)
chr4 (6-79)||(20225121-20225194)
chr4 (9-136)||(25463114-25463237)
chr4 (8-79)||(17043413-17043482)
chr4 (89-136)||(487231-487278)
chr4 (6-79)||(7909297-7909369)
chr4 (6-136)||(11054165-11054289)
chr4 (1-79)||(30639426-30639502)
chr4 (6-65)||(33836504-33836563)
chr4 (89-136)||(42164244-42164291)
chr4 (6-135)||(19027841-19027966)
chr4 (6-79)||(29207915-29207986)
chr4 (6-132)||(30581482-30581606)
chr4 (6-79)||(30690193-30690264)
chr4 (1-135)||(41018806-41018935)
chr4 (2-40)||(44718651-44718689)
chr4 (8-77)||(51865057-51865124)
chr4 (6-79)||(54175110-54175183)
chr4 (6-79)||(16494264-16494337)
chr4 (6-79)||(20405134-20405207)
chr4 (13-80)||(10277781-10277846)
chr4 (10-77)||(49796846-49796911)
chr4 (6-80)||(25629095-25629167)
chr4 (1-79)||(47444004-47444080)
chr4 (7-66)||(49938611-49938669)
chr4 (6-40)||(38755925-38755959)
chr4 (6-40)||(40553954-40553988)
chr4 (6-79)||(55766483-55766554)
chr4 (6-39)||(35532077-35532110)
chr4 (7-136)||(39029078-39029204)
chr4 (9-69)||(21489144-21489203)
chr4 (7-79)||(25343234-25343306)
chr4 (9-53)||(47482870-47482914)
[»] scaffold0049 (1 HSPs)
scaffold0049 (6-136)||(58969-59097)
[»] scaffold1176 (1 HSPs)
scaffold1176 (6-136)||(1604-1728)
[»] chr7 (33 HSPs)
chr7 (9-128)||(18512473-18512587)
chr7 (6-79)||(34626225-34626296)
chr7 (6-79)||(3469192-3469265)
chr7 (1-136)||(10693085-10693214)
chr7 (6-136)||(33871927-33872052)
chr7 (6-124)||(8148963-8149077)
chr7 (10-79)||(19266497-19266564)
chr7 (2-74)||(27889329-27889399)
chr7 (10-77)||(7879687-7879752)
chr7 (6-136)||(48735139-48735264)
chr7 (6-128)||(2541036-2541154)
chr7 (6-128)||(21172026-21172142)
chr7 (6-136)||(42391117-42391241)
chr7 (6-74)||(45018940-45019010)
chr7 (9-136)||(47716451-47716576)
chr7 (6-136)||(42805516-42805644)
chr7 (9-74)||(39123945-39124010)
chr7 (6-77)||(23231606-23231675)
chr7 (10-77)||(35787290-35787355)
chr7 (6-77)||(38262213-38262282)
chr7 (8-79)||(38604573-38604642)
chr7 (6-42)||(42495879-42495915)
chr7 (89-128)||(31591203-31591242)
chr7 (6-136)||(32758253-32758377)
chr7 (9-76)||(43557522-43557589)
chr7 (6-79)||(35334833-35334904)
chr7 (6-36)||(36602535-36602565)
chr7 (103-136)||(11458374-11458407)
chr7 (6-79)||(17048832-17048904)
chr7 (9-77)||(28362165-28362231)
chr7 (14-79)||(33500560-33500625)
chr7 (10-78)||(40463924-40463990)
chr7 (6-77)||(42798718-42798787)
[»] scaffold0258 (1 HSPs)
scaffold0258 (6-77)||(13041-13110)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-136)||(10802-10933)
[»] scaffold0015 (1 HSPs)
scaffold0015 (6-79)||(48651-48722)
[»] scaffold0180 (1 HSPs)
scaffold0180 (6-78)||(24150-24220)
[»] scaffold0954 (1 HSPs)
scaffold0954 (6-77)||(3593-3662)
[»] scaffold0254 (1 HSPs)
scaffold0254 (89-136)||(4149-4196)
[»] scaffold0168 (1 HSPs)
scaffold0168 (6-136)||(30571-30695)
[»] scaffold0018 (1 HSPs)
scaffold0018 (6-77)||(72884-72953)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 360
Target Start/End: Original strand, 42924847 - 42925199
Alignment:
Q  6 actaaagctcccgcatacgcagggt--ctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtt 103  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||         |||||||| ||||||    
T  42924847 actaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccct--gttttttacacaagatgttgtt 42924944  T
Q  104 ttcaagacttgaactcgtgaccttttagtcacaagagccttaccagtcacatagacacaaatgcaaaaattattatttgggcacatgcacaacaatgnnn 203  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||  |||| ||||||||||||||||||||| |||||| ||||| |||        
T  42924945 ttcaggacttgaactcgtgacctttcagtcacaaaagccttaccagtcaca--gacataaatgcaaaaattattatttgagcacatacacaataataaag 42925042  T
Q  204 nnnnttaaatgataaaataaattagtcatatcattcaactatttaatctttnnnnnnnnntcatgtgggtgagtgtgcttaatttagggttgctcctcag 303  Q
        |||||||||||||||||||||||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |     
T  42925043 aaaattaaatgataaaataaattagtcacatcattcaactatttaatctttaaaaaaaaatcatgtgggtgagtgtgcttaatttagggttgctcctaaa 42925142  T
Q  304 caaaaatttctctatgcttatgatgtttgcacatgtgaatccttaatcattatagct 360  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42925143 caagaatttctctatgcttatgatgtttgcacatgtgaatccttaatcattatagct 42925199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 38879701 - 38879573
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         | |||||||| |||||     
T  38879701 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttatacaagaggctgtttc 38879604  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  38879603 caggacttgaacccgtgacctttcagtcaca 38879573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 43334322 - 43334194
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||| ||||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||         ||||| |||| |||||     
T  43334322 actaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtttttttacacaggaggctgtttc 43334225  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  43334224 caggacttgaacccgtgacctttcagtcaca 43334194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 24449008 - 24448936
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||| |||||||||||||| |||||||| | ||| |||||  ||||||||||||||| ||||||||||    
T  24449008 actaaagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttacccta 24448936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 27328870 - 27328799
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||  |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  27328870 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 27328799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 32703540 - 32703416
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  32703540 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 32703447  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  32703446 caggacttgaacccgtgacctttcagtcaca 32703416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 7097777 - 7097848
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||  |||||||| |  || |||||  |||||||||||||||||||||||||    
T  7097777 actaaagctcccgcatacgcagggttcgggaaggggtctcaccattt--ggtgtattgtacgcaaccttaccct 7097848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 12006345 - 12006419
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||| ||||||||||||||||| | ||| |||| | ||||||||||| | | ||||||||||    
T  12006345 actaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttacccta 12006419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 43574723 - 43574653
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||| |||||||| | ||| |||||  ||| ||||||||||| |||||||||    
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtatattgtacgcagccttaccct 43574653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 2838890 - 2838825
Alignment:
Q  12 gctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||| | |||||||| ||| |||||  ||||||||||||||| |||||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccattt--ggtgtattgtacgcagccttaccct 2838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 22600569 - 22600501
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||| || |||||||||| ||| |||||  |||||||||||| || |||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccattt--ggtgtattgtacacagccttaccct 22600501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 4619121 - 4619194
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| |||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  4619121 actaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 4619194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 13801784 - 13801857
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| |||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  13801784 actaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 13801857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 16957432 - 16957374
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtac 66  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||    
T  16957432 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 10306493 - 10306548
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgt 64  Q
    |||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatttt-ggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 209023 - 209070
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||||||  || |||||||||| |||||||||||||||||    
T  209023 acacaagaggttgttgccaggacttgaacttgtgaccttttagtcaca 209070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 8170008 - 8170072
Alignment:
Q  13 ctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  8170008 ctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 8170072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19142955 - 19143031
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||| |||||||||||||| |||| |||||||| | ||| |||||  |||||| |||||||| |||||||||    
T  19142955 agtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccattt--ggtgtactgtacgcagccttaccct 19143031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 41014436 - 41014311
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || |||||  ||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  41014436 actaaagctcccgcatatgcggggtccaggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct---gtttttacacaagaggctgtttc 41014342  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  41014341 caggacttgaacccgtgaccttccagtcaca 41014311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 12575680 - 12575741
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaac 71  Q
    |||||||| ||||||||||||||  ||||||| | ||| |||||| |||||||||||||||||    
T  12575680 aaagctcctgcatacgcagggtccaggaaggggtcccaccatttt-ggtgtattgtacgcaac 12575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 16880664 - 16880735
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||| |||| |||||| | |  || |||||  ||||||||||||||| |||||||||    
T  16880664 actaaagctcccgcatacgcatggtccgggaagtggtcacaccattt--ggtgtattgtacgcagccttaccct 16880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 18684391 - 18684361
Alignment:
Q  6 actaaagctcccgcatacgcagggtctggga 36  Q
    |||||||||||||||||||||||||||||||    
T  18684391 actaaagctcccgcatacgcagggtctggga 18684361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 25622578 - 25622544
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  25622578 actaaagctcccgcatacgcagggtccgggaaggg 25622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 34154831 - 34154902
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||| ||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  34154831 actagagctaccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 39801634 - 39801600
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    ||||||||||||||||||| |||||||||||||||    
T  39801634 actaaagctcccgcatacgtagggtctgggaaggg 39801600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 13774983 - 13774947
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggat 42  Q
    |||||||||||||||||||||||||| || |||||||    
T  13774983 actaaagctcccgcatacgcagggtccggaaagggat 13774947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 46949 - 46823
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||||||||||||||        ||||||||||||||||     
T  46949 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttacccta--ttttttacacaagaggttgtttc 46854  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    ||  |||||||| ||||||||| ||||||||    
T  46853 cagcacttgaacccgtgaccttctagtcaca 46823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 46726 - 46796
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||| ||| ||||||| ||| |||||||||    
T  46726 taaagctcccgcatacgcagggtctgggaaggggtcccaccatttt-ggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 24789 - 24860
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||  |||||||| | ||| |||||  ||||| ||||||||| |||||||||    
T  24789 actaaagctcccgcatacgcagggttcgggaaggggtcccaccattt--ggtgtgttgtacgcagccttaccct 24860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 35005266 - 35005139
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||| ||||||||||||||||| |||||||| | ||| |||||| ||||||||||| ||| |||||||||         |||||||||| ||||||    
T  35005266 actaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccct--gttttttacacaagaggctgtttt 35005169  T
Q  106 caagacttgaactcgtgaccttttagtcac 135  Q
    |||||||||||| |||||||||| ||||||    
T  35005168 caagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 14617179 - 14617053
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| |||||||| |||||||||| ||| |||||  ||||||||||||||||||||||| |         |||||||||| |||||     
T  14617179 actaaagctcccgcatatgcagggtccgggaagggatcccaccattt--ggtgtattgtacgcaaccttacctt--gttatttacacaagaggctgtttc 14617084  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||||||||||||| |||||||    
T  14617083 caggacttgaactcgtgacctttcagtcaca 14617053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 18741974 - 18742047
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| |||||||||||||||||||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  18741974 actaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 18742047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 10668368 - 10668240
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||| | |||||||| | ||| |||| | ||||||||||||||||||||||| |         |||||||||| |||||     
T  10668368 actaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttacctt--gttttttacacaagaggctgtttc 10668271  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  10668270 caggacttgaacccgtgacctttcagtcaca 10668240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 27201790 - 27201662
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||||||| |||| |||||||| | ||| |||||| ||||||||||||||| |||||||||         |||||||||| |||||     
T  27201790 actaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct--gtttctgacacaagaggctgtttc 27201693  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| | |||||||| |||||||    
T  27201692 caggacttgaacccatgacctttcagtcaca 27201662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 42304224 - 42304297
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||| ||||||||||||| |||||||| | ||| ||||||  ||||||||||||||||||||||||    
T  42304224 actaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccct 42304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 9939605 - 9939476
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaa-gggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttt 104  Q
    |||||||||||||||||||||||||| | ||| ||| | ||| |||||| ||||||||| |||||||||||||  |        | ||||||||||||||    
T  9939605 actaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttacc--atgtttcttaaacaagaggttgttt 9939508  T
Q  105 tcaagacttgaactcgtgaccttttagtcaca 136  Q
     || |||||||||||||||||||| |||||||    
T  9939507 ccaggacttgaactcgtgacctttcagtcaca 9939476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 46247970 - 46248096
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  |||||||||||||||  ||||||||         |||||||||| |||||     
T  46247970 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccct--gttttttacacaagaggctgtttc 46248065  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||| |||||| ||| |||||||    
T  46248066 caagacttgaacccgtgacatttcagtcaca 46248096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 4349779 - 4349708
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  4349779 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 4349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 18944783 - 18944713
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  18944783 aaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccct 18944713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 23768337 - 23768408
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||||||||||  | ||| |||||  ||||||||||||||| |||||||||    
T  23768337 actaaagctcccgcatacgcagggtctgggaaggtgtcccaccattt--ggtgtattgtacgcagccttaccct 23768408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 47214650 - 47214579
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| ||||||||||||||||| | ||| |||||  |||||||||||||||||||||||||    
T  47214650 actagagctcccgcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct 47214579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 45402237 - 45402176
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||  |||||||||||||||    
T  45402237 actaaagctcccgcatacgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgca 45402176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 20004107 - 20004178
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||| | ||||||||||||||| |||||||    
T  20004107 actaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20004178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 46991945 - 46991819
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||| ||||||||||||| |||||||| | ||| ||  ||||||||||||||| || |||||||||         ||||||||||||||||     
T  46991945 actaaagctcccacatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagccttaccct--gttttttacacaagaggttgtttc 46991850  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  46991849 caggacttgaacccgtgaccttccagtcaca 46991819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 25468285 - 25468398
Alignment:
Q  11 agctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaaga 110  Q
    |||||||||||||||||||||||||||| | | | | |||||  |||||||||||||||||||||||||         |||||||||||||||| || ||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccattt--ggtgtattgtacgcaaccttaccct--gatttttacacaagaggttgtttccagga 25468380  T
Q  111 cttgaactcgtgaccttt 128  Q
    ||||||| | ||||||||    
T  25468381 cttgaacccatgaccttt 25468398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 30395743 - 30395871
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| |||||     
T  30395743 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttc 30395840  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  30395841 caggacttgaacccgtgaccttaaagtcaca 30395871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 35117782 - 35117856
Alignment:
Q  6 actaaagctcccgcat-acgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||| |||| |||||||||| |||||||| | |||||||||| |||||||||||| || |||||||||    
T  35117782 actaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccct 35117856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 19932782 - 19932843
Alignment:
Q  18 gcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 19932843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 22325034 - 22324962
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||| |||  |||| |||||| ||||||||||| ||| |||||||||    
T  22325034 actaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccct 22324962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 32632578 - 32632697
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaag 109  Q
    ||||||||||||| ||||||| ||||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| ||||| || |    
T  32632578 aagctcccgcatatgcagggtttgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct---gtttttacacaagaggctgtttccagg 32632672  T
Q  110 acttgaactcgtgaccttttagtca 134  Q
    |||||||| |||||||||| |||||    
T  32632673 acttgaacccgtgacctttcagtca 32632697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 20036355 - 20036235
Alignment:
Q  13 ctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaagact 112  Q
    |||| |||||||||||||| |||||||| ||||| |||||  ||||||||| |||||| ||||||||         ||||||||| |||||| || ||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccattt--ggtgtattgaacgcaatcttaccct-ttctctttacacaagagtttgtttccaggact 20036259  T
Q  113 tgaactcgtgaccttttagtcaca 136  Q
    ||||| |||||||||| |||||||    
T  20036258 tgaacccgtgacctttcagtcaca 20036235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 6925241 - 6925169
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||||||||||||||||| | |||||||| | ||| ||  ||||||||||||| |||| ||||||||||    
T  6925241 actaaagctcccgcatacgcagggaccgggaaggggtcccacca--ttcggtgtattgtccgcagccttacccta 6925169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 19701712 - 19701642
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||||||| ||||||||   ||| |||||| |||||||||||| || |||||||    
T  19701712 actaaagctcccgcatacgcagggtccgggaaggggccccaccatttt-ggtgtattgtacccatccttacc 19701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 23796606 - 23796538
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||| ||||| ||||||||||||||||| |  || |||||  ||||||||||||||||||||||    
T  23796606 actaaagctccagcatatgcagggtctgggaaggggtctcaccattt--ggtgtattgtacgcaaccttac 23796538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33594143 - 33594182
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  33594143 agtgcactaaagctcccgcatacgcagggtctgggaaggg 33594182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 34725115 - 34725239
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||   |||||||||||||| |||||||||         |||||||||| |||||     
T  34725115 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--agtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 34725208  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  34725209 caggacttgaacccgtgacctttcagtcaca 34725239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 38478299 - 38478423
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| | |||||| ||||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  38478299 actagagctcccgcatatgcagggtccgagaaggggttccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 38478392  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
     | ||||||||| |||||||||| |||||||    
T  38478393 taggacttgaacccgtgacctttcagtcaca 38478423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 50812079 - 50812010
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||   |||||||| | ||| |||||| |||||||||||||||||||||||||    
T  50812079 taaagctcccgcatacgcagggcgcgggaaggggt-ccaccatttt-ggtgtattgtacgcaaccttaccct 50812010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 19974091 - 19974164
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||||  || ||| ||||| || | |||||||||| |||||||||||||||||||| |||||    
T  19974091 actaaagctcccgcatacatagagtccgggaatgggtcccatcatttt-ggtgtattgtacgcaaccttgcccta 19974164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 35253204 - 35253275
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  35253204 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 35253275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 6358263 - 6358191
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||| ||| ||||||||||||||||||||||| | ||| |||||| ||||| ||||||||| | |||||||    
T  6358263 actaaagatcctgcatacgcagggtctgggaaggggtcccaccatttt-ggtgttttgtacgcagctttaccct 6358191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 50606544 - 50606487
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattg 63  Q
    ||||||||||||||||| |||||||| |||||||| | ||| |||||| |||||||||    
T  50606544 actaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtattg 50606487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 11596650 - 11596528
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    |||||||||||||||||||||||  ||||||| | ||| |||||  |||||||| |||||| |||||||||         ||||||||||||||||  |     
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattatacgcagccttaccct---gtttttacacaagaggttgtttctag 11596556  T
Q  109 gacttgaactcgtgaccttttagtcaca 136  Q
    ||||||||| |||||| ||| |||||||    
T  11596555 gacttgaacccgtgacatttcagtcaca 11596528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 27474421 - 27474360
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    |||||||||||||||||||||||||| |||||||| | ||| ||  ||| ||||||||||||||    
T  27474421 actaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcagtgtattgtacgca 27474360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 43768278 - 43768209
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||| ||||||||||||||||||||| | ||| || ||  ||||||||||| ||| |||||||||    
T  43768278 taaagctcccgtatacgcagggtctgggaaggggtcccaccaatt--ggtgtattgtaggcagccttaccct 43768209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12126849 - 12126925
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||| |||||||||||| |||||||| |||||||| | |||  ||||  ||||||||||||||| |||||||||    
T  12126849 agtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaattt--ggtgtattgtacgcagccttaccct 12126925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 15505702 - 15505634
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||  |||||||| | ||| |||||  |||||||||||||||  ||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccct 15505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 45812554 - 45812678
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| ||||||| ||||||||| | ||| |||||  ||||||||||| ||| |||||||||         |||||||||  ||||||    
T  45812554 actagagctcccgcatatgcagggtttgggaaggggtcccaccattt--ggtgtattgtatgcagccttaccct----cttttacacaagagactgtttt 45812647  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||  ||||||||| |||||||    
T  45812648 caggacttgaacctgtgacctttcagtcaca 45812678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 1517328 - 1517395
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctta 75  Q
    ||||||||||| |||||||||||||||| |||||| | ||| || ||  ||||||||||||||| |||||    
T  1517328 actaaagctcctgcatacgcagggtctgagaaggggtcccaccaatt--ggtgtattgtacgcagcctta 1517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 10378752 - 10378823
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| ||||||||   |||||| | ||| |||||  ||||||||||||||| |||||||||    
T  10378752 actaaagctcccgcatatgcagggtccaagaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 10378823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 27136673 - 27136738
Alignment:
Q  11 agctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||||||| || | ||| ||||||| | ||| |||||| |||||||||||||||||||||||    
T  27136673 agctcccgcatacacatgatctaggaaggggtcccaccatttt-ggtgtattgtacgcaaccttacc 27136738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 31442409 - 31442478
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||| ||||| ||| ||| |||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  31442409 aaagctcccacatacacagtgtccgggaaggggtcccaccatttt-ggtgtattgtacgcatccttaccct 31442478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 45264416 - 45264485
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||||||||| |||||||||| |||||| | ||| |||||| ||||||||| || || ||||||    
T  45264416 actaaagctcccgcatatgcagggtctgagaaggggtcccaccatttt-ggtgtattgcacacagccttac 45264485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 18335303 - 18335377
Alignment:
Q  4 gtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||| |||| || ||||| |||| || | |||||||||  | ||||||||||||||| ||||||||    
T  18335303 gtactaaagctcccgtatacacatggtctaggaaagggtcccatcattt--gatgtattgtacgcaactttacccta 18335377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 50548592 - 50548543
Alignment:
Q  2 gtgtactaaagctcccgcatacgcagggtctgggaagggattccatcatt 51  Q
    ||||||||||||||||||||||| |||||| |  || |||||||||||||    
T  50548592 gtgtactaaagctcccgcatacgtagggtccgaaaaaggattccatcatt 50548543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 31382233 - 31382298
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctta 75  Q
    ||||||||||||||| ||||||||  ||||||| | ||| |||||  ||||||||||||||| |||||    
T  31382233 taaagctcccgcatatgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagcctta 31382298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 389763 - 389643
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||||  |||||||||||||||||||||||||         |||||||||| |||||     
T  389763 actaaagctctcgcatacgcagggtcaggaaagggatcccatcattt--ggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttc 389666  T
Q  106 caagacttgaactcgtgaccttt 128  Q
    || ||||||||| ||||||||||    
T  389665 caggacttgaacccgtgaccttt 389643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 44530267 - 44530141
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||||||||||||  ||||||| | ||| |||||  ||||||||||||||| |||||||||         ||||||||||||||||     
T  44530267 actaaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct--gttttttacacaagaggttgtttc 44530172  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||| ||||||||| ||||||||    
T  44530171 caagacttgaacccgtgaccttctagtcaca 44530141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 44781516 - 44781648
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| ||||||||||||||||||||||||||||||| ||| | ||| |||||| |||||||||||| || |||||||||         ||||||||||||    
T  44781516 agtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccct--gtcttttacacaagaggtt 44781613  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcac 135  Q
    |||| || ||||||||| ||||| |||| ||||||    
T  44781614 gtttccaggacttgaacccgtgaactttcagtcac 44781648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 20284086 - 20284216
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||| ||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         | |||||||| |||||     
T  20284086 actaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttc 20284185  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  20284186 caggacttgaacccgtgacctttcagtcaca 20284216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 29521702 - 29521773
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||||||| ||| | ||| |||||  ||||||||||||||| |||||||||    
T  29521702 actaaagctcccgcatacgcagggtctgggatgggttcccaccattt--ggtgtattgtacgcagccttaccct 29521773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 35261797 - 35261726
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||  ||||||| | ||| |||||  |||||||||||||||||||||||||    
T  35261797 actaaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct 35261726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 21070714 - 21070787
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||| ||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  21070714 actaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 21070787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 12670267 - 12670391
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  12670267 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 12670360  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  12670361 caggacttgaacccgtgacctttcagtcaca 12670391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 26954258 - 26954124
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| ||||||||||||||||| ||  ||||||||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| |    
T  26954258 agtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccct-gtttttttacacaagaggct 26954160  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||| || ||||||||| ||||||||| || |||||    
T  26954159 gtttccaggacttgaacccgtgaccttctaatcaca 26954124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 28817643 - 28817769
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| ||  || ||||||||||||||| |||||||||         |||||||||| |||||     
T  28817643 actaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttgggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttc 28817738  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  28817739 caggacttgaacccgtgaccttccagtcaca 28817769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 36720914 - 36720788
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||| |||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  36720914 actaaagcttccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttc 36720819  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  36720818 caggacttgaacccgtgaccttccagtcaca 36720788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 39461011 - 39461136
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| |  || |||| | ||||||||||||||| |||||| ||         |||||||||| |||||     
T  39461011 actaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactct--gttttttacacaagaggctgtttc 39461108  T
Q  106 caagacttgaactcgtgaccttttagtc 133  Q
    || ||||||||| |||||||||| ||||    
T  39461109 caggacttgaacccgtgacctttcagtc 39461136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 2626636 - 2626569
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||| ||||||||||||||||| | |||||||||  |||||||||||||||  ||||||||    
T  2626636 aagctcccgcatatgcagggtctgggaaggggtcccatcattt--ggtgtattgtacgcagtcttaccct 2626569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 7136544 - 7136672
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         ||||||||||||||||     
T  7136544 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--ggtttttacacaagaggttgtttc 7136641  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| | |||||||  |||||||    
T  7136642 caggacttgaacccatgaccttccagtcaca 7136672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 13160815 - 13160748
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  13160815 aagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 13160748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 29877212 - 29877141
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||| |||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  29877212 actaacgctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 29877141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 16225139 - 16225066
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| || ||||| |||||||||| ||| |||| | |||||||||||||||  ||||||||    
T  16225139 actaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccct 16225066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 16013574 - 16013510
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaa 70  Q
    ||||||||||||||||| ||||||||||||||||| |  || ||||||  |||||||||||||||    
T  16013574 actaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgcaa 16013510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 5689749 - 5689678
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||| |||||||| |||  |||||||| ||||| |||||  ||||||||||||||| |||||||||    
T  5689749 actaaagctcccacatacgcatggttcgggaaggggttccaccattt--ggtgtattgtacgcagccttaccct 5689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 40604923 - 40604989
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctta 75  Q
    ||||||||||||||||||| ||||| | |||||||| ||||||||||   ||||||||||||||||||||    
T  40604923 actaaagctcccgcatacgtagggtttcggaaggga-tccatcattt--agtgtattgtacgcaacctta 40604989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 45071378 - 45071311
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  45071378 aagctcccgcatacgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 45071311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 8483956 - 8484026
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||||||| ||| | ||| || ||  ||||||||||||||| |||| ||||    
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccaccaatt--ggtgtattgtacgcagccttgccct 8484026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 8897783 - 8897853
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||| | ||||||||||    
T  8897783 taaagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgtagccttacccta 8897853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 20870043 - 20869970
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| || |||||  ||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  20870043 actaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20869970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 6760942 - 6760816
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| | |||||| | ||| |||| | ||||||||||||| | |||||||||         |||||||||| |||||     
T  6760942 actaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccct--gttttttacacaagaggctgtttc 6760845  T
Q  106 caagacttgaactcgtgaccttttagtca 134  Q
    || ||||||||| ||||||||| ||||||    
T  6760844 caggacttgaacccgtgaccttctagtca 6760816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 28873292 - 28873244
Alignment:
Q  29 gtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  28873292 gtctgggaagg-attccatcattt--ggtgtattgtacgcaaccttacccta 28873244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 5135309 - 5135377
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||| |||||||||||||| |||||||| | ||| |||||  |||||||||||| || |||||||||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacacagccttaccct 5135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 24365079 - 24365147
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||| ||||||||||||| |||||||| | ||| |||||  |||||||||| |||| |||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccattt--ggtgtattgttcgcagccttaccct 24365147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 30454114 - 30454238
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||| ||||||| ||||||| |         |||||||||| |||||     
T  30454114 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtatcgtacgcagccttacctt----gttttacacaagaggctgtttc 30454207  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  30454208 caggacttgaacccgtgacctttcagtcaca 30454238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 12626008 - 12625937
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||| ||| | ||| |||||  ||||||||||| |||  ||||||||    
T  12626008 actaaagctcccgcatacgcagggtccgggagggggtcccaccattt--ggtgtattgtatgcagtcttaccct 12625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 43942421 - 43942371
Alignment:
Q  29 gtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  43942421 gtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 43942371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 27468109 - 27468141
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaag 38  Q
    |||||||||||||||||||||||||| ||||||    
T  27468109 actaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 12221935 - 12222060
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    ||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| ||||| |||    
T  12221935 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttccaa 12222032  T
Q  109 gacttgaactcgtgaccttttagtcaca 136  Q
    ||||||||| |||||||||| |||||||    
T  12222033 gacttgaacccgtgacctttcagtcaca 12222060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 29355872 - 29356000
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| |||||     
T  29355872 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gtttcttacacaagaggctgtttc 29355969  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  29355970 caggacttgaacccgtgacctttcagtcaca 29356000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 12886031 - 12885968
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    |||||||||||| |||||||||||||||||||||| | ||| ||||||  ||||||||||||||    
T  12886031 actaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgca 12885968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 2166427 - 2166555
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||| |||   |||||| |||||||| | ||| |||| | ||||||||||||||||||||| |||         ||||||||||||||||     
T  2166427 actaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcct--gtattttacacaagaggttgtttc 2166524  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  2166525 caggacttgaacccgtgacctttcagtcaca 2166555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 2178060 - 2178188
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||| |||   |||||| |||||||| | ||| |||| | ||||||||||||||||||||| |||         ||||||||||||||||     
T  2178060 actaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcct--gtattttacacaagaggttgtttc 2178157  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  2178158 caggacttgaacccgtgacctttcagtcaca 2178188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 25557841 - 25557770
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| |||| ||||||  ||||||||||||||| |||||||||    
T  25557841 actagagctcccgcatatgcagggtccgggaaggggttccttcattt--ggtgtattgtacgcagccttaccct 25557770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 1347080 - 1346956
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         ||||||| || |||||     
T  1347080 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagtggctgtttc 1346987  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  1346986 caggacttgaacccgtgacctttcagtcaca 1346956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 1354774 - 1354898
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  1354774 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 1354867  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||  ||||||||| |||||||    
T  1354868 caggacttgaaccagtgacctttcagtcaca 1354898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 3116142 - 3116209
Alignment:
Q  2 gtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    ||||||||||||||||||||||||| |||| | |||||| | ||| |||||| |||||||||| ||||    
T  3116142 gtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgca 3116209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7947383 - 7947460
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||| ||||||||   ||| |||||| ||||||||||||||| |||||||||    
T  7947383 agtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccatttt-ggtgtattgtacgcagccttaccct 7947460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 26097276 - 26097205
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| | || ||||||  ||||||||||||||| |||||||||    
T  26097276 actagagctcccgcatatgcagggtccgggaaggggtcccttcattt--ggtgtattgtacgcagccttaccct 26097205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 32579545 - 32579482
Alignment:
Q  4 gtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    ||||||||||||||||||| ||||||||||||||||| | ||| |||||  || ||||||||||||    
T  32579545 gtactaaagctcccgcatatgcagggtctgggaaggggtcccaccattt--ggggtattgtacgca 32579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 18277212 - 18277336
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttca 107  Q
    ||||||||||||||||| || |||| ||||||| | ||| |||||  |||||  ||||| ||||||||||||         |||||||||| ||||| ||    
T  18277212 taaagctcccgcatacgtagagtctaggaaggggtcccaccattt--ggtgttctgtactcaaccttaccct--gatttttacacaagaggctgtttcca 18277307  T
Q  108 agacttgaactcgtgaccttttagtcaca 136  Q
    ||| |||||| ||||||||||||||||||    
T  18277308 agatttgaacccgtgaccttttagtcaca 18277336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 24734760 - 24734689
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| ||||||||||| || |||||||| | ||| | |||| | |||||||||||||||||||||||    
T  24734760 ctaaagctcc-gcatacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccct 24734689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 29016301 - 29016333
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||||||||||    
T  29016301 taaagctcccgcatacgcagggtctgggaaggg 29016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 9161242 - 9161172
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||| |||||||||||||||| | |||||| | ||| |||| | | ||||||||||||| ||||||    
T  9161242 actaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttac 9161172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 10734922 - 10734956
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  10734922 actaaagctcccgcatacgcagggtccgggaaggg 10734956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 13628807 - 13628935
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| |||||     
T  13628807 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gtttcttacacaagaggctgtttc 13628904  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  13628905 caggacttgaacccgtgacctttcagtcaca 13628935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 8247706 - 8247832
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttca 107  Q
    |||||||||||||||||||||||| |||||||  | ||| |||| | |||||||||||||||||||||||||         |||||||||| ||||| ||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccct--gttttttacacaagaggctgtttcca 8247803  T
Q  108 agacttgaactcgtgaccttttagtcaca 136  Q
     ||||||||| |||||||||| |||||||    
T  8247804 ggacttgaacccgtgacctttcagtcaca 8247832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 46421054 - 46421180
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttca 107  Q
    |||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| ||||| ||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttcca 46421151  T
Q  108 agacttgaactcgtgaccttttagtcaca 136  Q
     ||||||||| |||||||||| |||||||    
T  46421152 ggacttgaacccgtgacctttaagtcaca 46421180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 54374362 - 54374488
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| |||||||| |||||||| | ||| |||||| |||| |||||||||| ||||||||||        ||||||||||||||||     
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt-ggtggattgtacgcagccttacccta--ttttttacacaagaggttgtttc 54374458  T
Q  106 caagacttgaactcgtgaccttttagtcac 135  Q
    ||||||||||||  ||||||||| ||||||    
T  54374459 caagacttgaacctgtgacctttcagtcac 54374488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 29366732 - 29366865
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| |||||||||||| ||||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         | |||||||| |    
T  29366732 agtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttatacaagaggct 29366829  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||| || ||||||||| ||||||||||||||||||    
T  29366830 gtttccaggacttgaacccgtgaccttttagtcaca 29366865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 6411839 - 6411910
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||  ||||||||||||||| |||||||||    
T  6411839 actaaagctcccgcatacgcaaggtctgggaaggggtcccatcattt--ggtgtattgtacgcagccttaccct 6411910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 40272829 - 40272955
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         ||||||||||||||||     
T  40272829 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct--gttttttacacaagaggttgtttc 40272924  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| | |||||||  |||||||    
T  40272925 caggacttgaacccatgaccttccagtcaca 40272955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 45139497 - 45139621
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    |||| ||||||||||||||| ||||||||||| | ||| |||||| ||||||||||| ||| |||||||||         |||||||||||||||| |||    
T  45139497 aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccct--gtgttttacacaagaggttgtttccaa 45139593  T
Q  109 gacttgaactcgtgaccttttagtcaca 136  Q
     |||||||| |||||||||| |||||||    
T  45139594 aacttgaacccgtgacctttcagtcaca 45139621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 10795444 - 10795513
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||  ||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  10795444 aagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 10795513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 45786231 - 45786304
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||| |||| ||||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  45786231 actaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct 45786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 53996582 - 53996707
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||| ||||||||| ||| |||||||| | ||| |||||| ||||||||||| ||| |||||||||         ||||||||||||||||     
T  53996582 actaaagctcccacatacgcagtgtcagggaaggggtcccaccatttt-ggtgtattgtaagcagccttaccct--gttttttacacaagaggttgtttc 53996678  T
Q  106 caagacttgaactcgtgaccttttagtca 134  Q
    || ||||||||| |||||||||| |||||    
T  53996679 cacgacttgaacacgtgacctttcagtca 53996707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 54484831 - 54484762
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||    
T  54484831 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttacc 54484762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 5173736 - 5173863
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||||||| |||| ||||||||   ||| |||||| ||||||||| | ||||||||||  |         ||||||||||||||||     
T  5173736 actaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttacttt---gtttttacacaagaggttgtttc 5173832  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  5173833 caggacttgaacccgtgacctttcagtcaca 5173863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 9607346 - 9607272
Alignment:
Q  5 tactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||| || |||||||||||||| | ||| |||| | |||||||| |||||| |||||||||    
T  9607346 tactaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccct 9607272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 39203654 - 39203583
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| ||| |||| |||||||| | ||| |||||  |||||||||||||||||||||||||    
T  39203654 actaaagctcccgcatatgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct 39203583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 353366 - 353439
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  353366 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 34420660 - 34420786
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||| |||||||| |||| |||||||| | ||| |||||| ||||||| ||||||| |||||||||         |||||||||| |||||     
T  34420660 actaaagctcccacatacgcaaggtccgggaaggggtcccaccatttt-ggtgtatggtacgcagccttaccct--gttttttacacaagaggctgtttc 34420756  T
Q  106 caagacttgaactcgtgaccttttagtcac 135  Q
    || ||||||||| |||||||||| ||||||    
T  34420757 caggacttgaacccgtgacctttcagtcac 34420786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 516552 - 516423
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatca-ttttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttt 104  Q
    |||||||||||||||||||||||||| |||||||| | ||  || |||| ||| |||||| |||| |||||||||         |||||||||| |||||    
T  516552 actaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccct--gttttttacacaagaggctgttt 516455  T
Q  105 tcaagacttgaactcgtgaccttttagtcaca 136  Q
     || ||||||||| |||||||||| |||||||    
T  516454 ccaggacttgaacccgtgacctttcagtcaca 516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7943135 - 7943059
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| ||| |||||  | |||||||||||||  ||||||||    
T  7943135 agtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccattt--gatgtattgtacgcagtcttaccct 7943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 22609901 - 22609780
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaag 109  Q
    ||||||||||||||||| |||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| ||||| ||||    
T  22609901 aagctcccgcatacgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct---gtttttacacaagaggctgtttccaag 22609807  T
Q  110 acttgaactcgtgaccttttagtcaca 136  Q
    |||||||| ||| |||||  |||||||    
T  22609806 acttgaacccgttaccttacagtcaca 22609780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 829459 - 829528
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||| |||||||||||||  |||||||| | ||| |||||| ||||||||||||||||| ||||    
T  829459 actaaagctcctgcatacgcagggttcgggaaggggtcccaccatttt-ggtgtattgtacgcaactttac 829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 13730619 - 13730747
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | |||||||||||| || |||||||||         |||||||||| |||||     
T  13730619 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccct--gttttttacacaagaggctgtttc 13730716  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  13730717 caggacttgaacccgtgaccttccagtcaca 13730747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 34771381 - 34771452
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  34771381 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 34771452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 52926237 - 52926304
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||||||||||||||||| |||||||  | ||| |||||  ||||||||||||||| ||||||    
T  52926237 ctaaagctcccgcatacgcagggtccgggaaggtgtcccaccattt--ggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 14987099 - 14987026
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| ||| |||| ||||| || | ||| |||| | ||||||||||||||| |||||||||    
T  14987099 actaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccct 14987026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 45948855 - 45948972
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| | |||||| | ||| || ||  ||||||||||| ||| ||||||||||        ||||||||||||||||     
T  45948855 actaaagctcccgcatacgcagggtccgagaaggggtcccaccaatt--ggtgtattgtatgcagccttacccta--ttttttacacaagaggttgtttc 45948950  T
Q  106 caagacttgaactcgtgacctt 127  Q
    || || |||||| |||||||||    
T  45948951 caggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 49013490 - 49013563
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||| || || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  49013490 actaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 49013563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 1217228 - 1217112
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||  |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  1217228 actagagctcccgcatatgcagggtccgggaaggggtcccgccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 1217135  T
Q  106 caagacttgaactcgtgaccttt 128  Q
    || ||||||||| ||||||||||    
T  1217134 caggacttgaacccgtgaccttt 1217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 128
Target Start/End: Original strand, 12914056 - 12914170
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaag 109  Q
    ||||||||||||| ||||||||||||||||| |  || |||||  ||||||||||||||  |||||||||         |||||||||| ||||| || |    
T  12914056 aagctcccgcatatgcagggtctgggaaggggtctcaccattt--ggtgtattgtacgccgccttaccct--gttttttacacaagaggctgtttccagg 12914151  T
Q  110 acttgaactcgtgaccttt 128  Q
    ||||||||| |||||||||    
T  12914152 acttgaacttgtgaccttt 12914170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16735585 - 16735509
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||| ||||| |||||||||||| ||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  16735585 agtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 16735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 25944609 - 25944551
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtac 66  Q
    ||||||||||| ||||||||||||| |||||||| | ||| |||||| ||||||||||||    
T  25944609 ctaaagctcccacatacgcagggtcagggaaggggtcccaccatttt-ggtgtattgtac 25944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 26869843 - 26869775
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||| |||| || ||||| | ||| |||||  ||||||||||||||| |||||||||    
T  26869843 aaagctcccgcatacgcatggtccggcaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 26869775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 15797360 - 15797289
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||||||| |||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  15797360 actagagctcccacatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 15797289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 22122934 - 22123005
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||||| |||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  22122934 actagagctctcgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 22123005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 26573267 - 26573196
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| ||||||||||||||| |||| ||| | ||| || ||  ||||||||||||||| |||||||||    
T  26573267 actaaagctcacgcatacgcagggtccgggatggggtcccaccaatt--ggtgtattgtacgcagccttaccct 26573196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 31592987 - 31592916
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||  | ||| |||||  ||||||||||||||| |||||||||    
T  31592987 actagagctcccgcatatgcagggtccgggaaggagtcccaccattt--ggtgtattgtacgcagccttaccct 31592916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 9276401 - 9276333
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||| |||||||||||||||||| ||||| ||  |||| |||||  ||||||||||||||| |||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagg-gtccaccattt--ggtgtattgtacgcagccttaccct 9276333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 10300629 - 10300585
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattt 52  Q
    ||||||||||||||||| ||||||||||||||  | |||||||||    
T  10300629 taaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 25517187 - 25517248
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    ||||||||||| ||||||||||| || |||||||| | ||| ||||||  ||||||||||||||    
T  25517187 actaaagctccagcatacgcaggatccgggaaggggtcccaccatttt--gtgtattgtacgca 25517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 10543818 - 10543690
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||         ||||||||||  ||||     
T  10543818 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccct--gttttttacacaagaggccgtttc 10543721  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  10543720 caggacttgaacccgtgacctttcagtcaca 10543690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 31158452 - 31158529
Alignment:
Q  2 gtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| ||| ||||||| |||| ||||||||    
T  31158452 gtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccct 31158529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 17380257 - 17380371
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    ||||||||||||| |||||||||  ||||||| |||||||||||  ||||||||| || ||||||||||||         |||||||||||||||| |||    
T  17380257 aaagctcccgcatccgcagggtccaggaaggggttccatcattt--ggtgtattgcacacaaccttaccct---gtttatacacaagaggttgtttccaa 17380351  T
Q  109 gacttgaactcgtgaccttt 128  Q
    ||||||||| ||||||||||    
T  17380352 gacttgaacccgtgaccttt 17380371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 32781308 - 32781423
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    ||||||||||||||| |||||||||||||||| | ||| |||||  |||||||||||||||  ||||||||         |||||||||||||||| | |    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccct--gttttttacacaagaggttgtttccga 32781403  T
Q  109 gacttgaactcgtgaccttt 128  Q
    ||||||||||||||||||||    
T  32781404 gacttgaactcgtgaccttt 32781423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 10546281 - 10546154
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         | |||||||| |||||     
T  10546281 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct-gtttttttatacaagaggatgtttc 10546185  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  10546184 caggacttgaacccgtgacctttcagtcaca 10546154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 30826153 - 30826082
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||| | ||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||    
T  30826153 actaaagctcccgcatatgtagggtctgggaaggg-ttccaccattt--ggtgtattgtacgcaaccttacccta 30826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 9671297 - 9671226
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  9671297 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 9671226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 14530438 - 14530310
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| | ||||||||||||| | |||||||||         | |||||||| |||||     
T  14530438 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccct--gttttttatacaagaggctgtttc 14530341  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  14530340 caggacttgaacccgtgacctttcagtcaca 14530310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 19185757 - 19185831
Alignment:
Q  3 tgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| ||||||  ||| |||||||||||| |||||    
T  19185757 tgtactaaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgcaactttacc 19185831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 8455333 - 8455459
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||| |||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  8455333 actaaagctccggcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct--gtgttttacacaagaggctgtttc 8455428  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  8455429 caggacttgaacccgtgaccttccagtcaca 8455459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 11514553 - 11514486
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||  ||||||||||||||| ||||||    
T  11514553 actaaagctcccgcatacgcagggtctgggaaggg-tcccaccattt--ggtgtattgtacgcagccttac 11514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 21779278 - 21779402
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  |||||||||||||||||||||||||         |||||||||| ||| |     
T  21779278 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct----gttttacacaagaggctgtctc 21779371  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  21779372 caggacttgaacccgtgacctttcagtcaca 21779402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 24200640 - 24200768
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||| | ||||| ||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||         |||||||||| |||||     
T  24200640 actaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttc 24200737  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||| ||| |||||||    
T  24200738 caggacttgaacccgtgacttttcagtcaca 24200768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 25249755 - 25249826
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| ||||||||||||||  |||||||||| ||| |||||  ||||||||||||||| |||||||||    
T  25249755 actaaagctcacgcatacgcagggttcgggaagggatcccaccattt--ggtgtattgtacgcagccttaccct 25249826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 99282 - 99348
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctt 74  Q
    |||||||||||||||||| ||||||||| |||||| ||||| |||||  ||||||||||||||| ||||    
T  99282 actaaagctcccgcatacacagggtctgagaaggggttccaccattt--ggtgtattgtacgcagcctt 99348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 14444846 - 14444721
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||| |||| || |||||||||         |||||||||| |||||     
T  14444846 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtatcgtacacagccttaccct---gtttttacacaagaggctgtttc 14444752  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  14444751 caggacttgaacccgtgaccttccagtcaca 14444721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 19977731 - 19977803
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||||||||||| || |||  |||||||||| ||| |||||  ||||||||||||||||||||| ||||    
T  19977731 actaaagctcccgcatacacaaggttcgggaagggatcccaccattt--ggtgtattgtacgcaaccttatccta 19977803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 25079734 - 25079861
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||  |||||||||||||| |||||||| | ||| ||  |||||||||||||||||| ||||| |||         ||||||||||||||||     
T  25079734 actaaagctcttgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcatcctta-ccttgtttttttacacaagaggttgtttc 25079830  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
     ||||||||||| |||||||||  |||||||    
T  25079831 taagacttgaacccgtgaccttccagtcaca 25079861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 5841148 - 5841074
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | | ||||||||||||| ||||||||||    
T  5841148 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttacccta 5841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 36871609 - 36871539
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||| |||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  36871609 actaaagctcccgcatacgca-ggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 36871539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 29419985 - 29420030
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtca 134  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  29419985 acacaagaggttgtttccaggacttgaactcgtgacctttcagtca 29420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 24860005 - 24860066
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    |||||||||||||||||||||||||| | |||||| ||| | |||||  |||||||||||||||    
T  24860005 actaaagctcccgcatacgcagggtccgagaaggggttctaccattt--ggtgtattgtacgca 24860066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17623687 - 17623611
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||||||||| || |||||||||| |  |||||||| ||||| |||||  ||||||||||||||| |||||||||    
T  17623687 agtgcactaaagcttccacatacgcaggattcgggaaggggttccaccattt--ggtgtattgtacgcagccttaccct 17623611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 17668120 - 17667994
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||  |||||||||||  | |||||| ||||| |||||  ||||||||||||||| |||||||||         |||||||||||| |||     
T  17668120 actaaagctcccatatacgcagggttcgagaaggggttccaccattt--ggtgtattgtacgcagccttaccct--gatttttacacaagaggttctttc 17668025  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  17668024 caggacttgaacccgtgaccttccagtcaca 17667994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 17896378 - 17896306
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||||| ||||||||||||| | |||||| | ||| |||||  ||| ||||||||||| ||||||||||    
T  17896378 actaaagctcccacatacgcagggtccgagaaggggtcccaccattt--ggtatattgtacgcagccttacccta 17896306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 23488601 - 23488538
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    |||||||||| ||||||||||||||| |||||||| | ||| ||||||  |||||||| |||||    
T  23488601 actaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgca 23488538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 44643641 - 44643573
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||| ||||||||||||||||||||||||||||| | ||| |||||  |||  |||||||||| ||||||    
T  44643641 actaaggctcccgcatacgcagggtctgggaaggggtcccaccattt--ggtacattgtacgcagccttac 44643573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 7214654 - 7214526
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||| ||| ||||||||||| ||| | ||||||||  || ||||||  |||||||||||||| |||||||||         |||||||||  |||||     
T  7214654 actaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccct--gtattttacacaagagactgtttc 7214557  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||| | |||||||| |||||||    
T  7214556 caagacttgaacccatgacctttcagtcaca 7214526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 13245182 - 13245220
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgacctt 127  Q
    |||||||||||||||| || |||||||||||||||||||    
T  13245182 acacaagaggttgtttccaggacttgaactcgtgacctt 13245220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 23145794 - 23145840
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcac 135  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||    
T  23145794 acacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 23557584 - 23557630
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcac 135  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||    
T  23557584 acacaagagtctgttttcaagacttgaacccgtgacctttcagtcac 23557630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 34766373 - 34766339
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  34766373 actaaagctcccgcatacgcagggtccgggaaggg 34766339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 39914323 - 39914393
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||||||||||||  ||||||| | ||| ||  ||||||||||||||| || |||||||||    
T  39914323 actaaagctcccgcatacgcagggtc-aggaaggggtcccacca--ttcggtgtattgtacacatccttaccct 39914393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24890534 - 24890460
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||| ||||||||||| |||||||||||||| |||||||| | ||| || ||  ||||||||||| ||| |||||||    
T  24890534 agtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaatt--ggtgtattgtatgcagccttacc 24890460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 31821362 - 31821432
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||||||||| |||| |  || ||||| | |||||||||  |||||||||||| |||||||||||||    
T  31821362 taaagctcccgcatacacaggtttcggaaaggggtcccatcattt--ggtgtattgtacacaaccttacccta 31821432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 27573738 - 27573669
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||| ||||| |||||| ||||||  | ||||| |||||  ||||||||||||||| |||||||    
T  27573738 actaaagctcccacatacacagggtttgggaaatggttccaccattt--ggtgtattgtacgcagccttacc 27573669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 54730370 - 54730241
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| | |||||||| |||||| ||||| ||||        |||||||||| |||||     
T  54730370 actaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatccta-tttttttacacaagaggctgtttc 54730272  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
     | ||||||||| ||||||||||| ||||||    
T  54730271 taggacttgaacccgtgaccttttggtcaca 54730241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 44363147 - 44363275
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||| ||||  ||||||||| || ||||||         ||||| |||| ||||||    
T  44363147 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccct--gttttttacacacgaggctgtttt 44363244  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||||||||||||| |||||||    
T  44363245 caggacttgaactcgtgacctttcagtcaca 44363275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 20639675 - 20639747
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  20639675 actaaagctcccgcatacgcagggtccgggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccct 20639747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 23501907 - 23501834
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| |||||||| |||||||| | ||| |||| | |||||||||||||||||||||||||    
T  23501907 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccct 23501834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 6430644 - 6430768
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttc 106  Q
    ||||||||||||||||||||||||| |||||| | | ||| |||||  ||||||||||||||| |||||||||         |||||||||| ||||| |    
T  6430644 ctaaagctcccgcatacgcagggtccgggaagtggtcccaccattt--ggtgtattgtacgcagccttaccct---gtttttacacaagaggctgtttcc 6430738  T
Q  107 aagacttgaactcgtgaccttttagtcaca 136  Q
    | ||||||||| |||||||||| |||||||    
T  6430739 atgacttgaacccgtgacctttcagtcaca 6430768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 16911682 - 16911554
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||| ||||||||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| |||||     
T  16911682 actaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gatttgtacacaagaggctgtttc 16911585  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
     | ||||||||| |||||||||| |||||||    
T  16911584 taggacttgaacccgtgacctttaagtcaca 16911554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 5648381 - 5648251
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| ||| |||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |    
T  5648381 agtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct---gtttttacacaagaggct 5648287  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||| || ||||||||| |||||||||  |||||||    
T  5648286 gtttccaggacttgaacccgtgaccttacagtcaca 5648251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 14983952 - 14983880
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||   |||||||||| ||||||||||||||    
T  14983952 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--agtgtattgtaggcaaccttacccta 14983880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 20225100 - 20224976
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         ||||||||||||||||     
T  20225100 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggttgtttc 20225007  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| | |||||||| |||||||    
T  20225006 caggacttgaacccatgacctttcagtcaca 20224976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 20908653 - 20908723
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||||||  |||||||| | ||| |||||| ||||||||||||||| |||||||    
T  20908653 actaaagctcccgcatacgcagggttcgggaaggggtcccaccatttt-ggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 30352597 - 30352660
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    |||||||||||||||||||||||||| | |||||| | ||| |||||| |||||||||||||||    
T  30352597 actaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgca 30352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 40915942 - 40915821
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaag 109  Q
    |||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| ||||||| |         |||||||||| ||||| || |    
T  40915942 aagctcccgcatacgcagggtccgggaagggctcccaccattt--ggtgtattgtacgcagccttacctt---gtttttacacaagaggctgtttccagg 40915848  T
Q  110 acttgaactcgtgaccttttagtcaca 136  Q
    |||||||| ||||||||| ||||||||    
T  40915847 acttgaacccgtgaccttatagtcaca 40915821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 5306694 - 5306806
Alignment:
Q  19 catacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaagacttgaact 118  Q
    ||||||||||||| |||||||| | ||| |||||  |||||||||||||||||||||||||         |||||||||| ||||| || |||||||||     
T  5306694 catacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct---gattttacacaagaggctgtttccaggacttgaacc 5306788  T
Q  119 cgtgaccttttagtcaca 136  Q
    |||||||||| |||||||    
T  5306789 cgtgacctttcagtcaca 5306806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 16408618 - 16408746
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| |||||||| ||||| |||| | |||||||||||||||  ||||||||         |||||||||| |||||     
T  16408618 actaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccct--gttttttacacaagaggctgtttc 16408715  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  16408716 caggacttgaacccgtgaccttccagtcaca 16408746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 21647084 - 21647010
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||| || |||||||||||||| | ||| |||| | ||| ||||||||||| ||||||||||    
T  21647084 actaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttacccta 21647010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 20225194 - 20225121
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||    
T  20225194 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20225121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 25463237 - 25463114
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    |||||||||||||| |||||||| |||||||| | ||| |||||  ||||| |||||||||||||| |||          |||||||||||||||| ||     
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtgttgtacgcaacctttccc--agttttttacacaagaggttgtttccag 25463142  T
Q  109 gacttgaactcgtgaccttttagtcaca 136  Q
    ||||||||| |||||||||| |||||||    
T  25463141 gacttgaacccgtgacctttcagtcaca 25463114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 17043413 - 17043482
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||| ||||| ||||||||||||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 17043482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 487231 - 487278
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||    
T  487231 acacaagaggttgtttccaagacttgaacccgtgacctttcagtcaca 487278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 7909297 - 7909369
Alignment:
Q  6 actaaagctccc-gcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||| |||||||||||||  |||||||| | ||| |||||  |||||||||||||||||||||||||    
T  7909297 actaaagctccccgcatacgcagggttcgggaaggggtcccaccattt--ggtgtattgtacgcaaccttaccct 7909369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 11054165 - 11054289
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| ||||  |||||  |||||||||||||||  ||||||||         |||||||||  ||||||    
T  11054165 actagagctcccgcatatgcagggtccgggaaggggttccgccattt--ggtgtattgtacgcagtcttaccct----gttttacacaagagactgtttt 11054258  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  11054259 caggacttgaacccgtgacctttcagtcaca 11054289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30639502 - 30639426
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||||||||||||||||| |||||||| |||||||| |  || |||||  ||||||||||||||| |||||||||    
T  30639502 agtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccct 30639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 33836504 - 33836563
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgta 65  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| | |||||||||||    
T  33836504 actaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 42164244 - 42164291
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42164244 acacaagaggttgtttccaagacttgaacccgtgacctttcagtcaca 42164291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 19027966 - 19027841
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||| ||||||||| |||||| ||||| | ||| || ||  ||||||||||||||| |||||||||         |||||||| |||||||     
T  19027966 actaaagctcccacatacgcagagtctggaaaggggtcccaccaatt--ggtgtattgtacgcagccttaccct--gttttttacacaagatgttgtttc 19027871  T
Q  106 caagacttgaactcgtgaccttttagtcac 135  Q
    || ||||||||| |||||||||| ||||||    
T  19027870 caggacttgaacccgtgacctttcagtcac 19027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 29207915 - 29207986
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  29207915 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 29207986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 30581482 - 30581606
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||  |||| |||||||| |||||||| | ||| |||||| |||||||||||| || |||||||||         ||||||||||||||||     
T  30581482 actaaagctcctacatatgcagggtccgggaaggggtcccaccatttt-ggtgtattgtacacacccttaccct-gtttttttacacaagaggttgtttc 30581579  T
Q  106 caagacttgaactcgtgaccttttagt 132  Q
    || ||||||||| | ||||||||||||    
T  30581580 cacgacttgaacccttgaccttttagt 30581606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 30690193 - 30690264
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||||||| | ||| || ||  ||||||||||| ||| |||||||||    
T  30690193 actaaagctcccgcatacgcagggtccgggaaggggtcccaccaatt--ggtgtattgtatgcagccttaccct 30690264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41018806 - 41018935
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| |||||||| ||  |||||||| ||||||||||||| | |||  ||||  ||||||||||||| | ||||||||||        ||||||||||||    
T  41018806 agtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactattt--ggtgtattgtacgtagccttaccctaatttt---acacaagaggtt 41018900  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcac 135  Q
    |||| || ||||||||| |||||||||| ||||||    
T  41018901 gtttccaggacttgaacccgtgacctttcagtcac 41018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 44718689 - 44718651
Alignment:
Q  2 gtgtactaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44718689 gtgtgctaaagctcccgcatacgcagggtctgggaaggg 44718651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 51865057 - 51865124
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||||| ||||||||   ||| |||||  ||||||||||||||| |||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccattt--ggtgtattgtacgcagccttacc 51865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 54175183 - 54175110
Alignment:
Q  6 actaaagctcccgcatacgcagggt-ctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| ||||||| | |||||||| | ||| |||||| ||||||||||||||| |||||||||    
T  54175183 actaaagctcccgcatatgcagggtccggggaaggggtcccaccatttt-ggtgtattgtacgcagccttaccct 54175110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 16494337 - 16494264
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||| |||||||| ||||||||||||| || | ||| |||||| ||||||||||| ||| | |||||||    
T  16494337 actaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccct 16494264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 20405207 - 20405134
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| |  ||||||||||||||| ||||||||    
T  20405207 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccct 20405134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 10277781 - 10277846
Alignment:
Q  13 ctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    |||||||||| ||||||||||||||||| || || |||||  ||||||||||||||| ||||| ||||    
T  10277781 ctcccgcatatgcagggtctgggaaggggtttcaccattt--ggtgtattgtacgcagccttatccta 10277846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 49796911 - 49796846
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||  |||||||| | ||| |||||  ||||||||||||||| |||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccattt--ggtgtattgtacgcagccttacc 49796846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 25629167 - 25629095
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacccta 80  Q
    ||||||||||||||||| | |||||| |||||||| | ||| |||||  |||||||||||| || ||||||||||    
T  25629167 actaaagctcccgcatatgtagggtccgggaaggggtcccaccattt--ggtgtattgtacacagccttacccta 25629095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 47444080 - 47444004
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| ||| ||||||| ||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  47444080 agtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 47444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 49938611 - 49938669
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtac 66  Q
    |||||||||||||||| ||||||| ||||||||| | ||| |||||| ||||||||||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccatttt-ggtgtattgtac 49938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 38755925 - 38755959
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  38755925 actaaagctcccgcatacgcagggtccgggaaggg 38755959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 40553954 - 40553988
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaaggg 40  Q
    |||||||||||||||||||||||||| ||||||||    
T  40553954 actaaagctcccgcatacgcagggtccgggaaggg 40553988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 55766483 - 55766554
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||| |||||||||| |||| |||| ||| ||||| ||||  | |||||||||||||| |||||||||    
T  55766483 actaaagctctcgcatacgcaaggtccgggatggggttccaccatt--cagtgtattgtacgcagccttaccct 55766554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 35532110 - 35532077
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagg 39  Q
    |||||||||||||||||||||||||| |||||||    
T  35532110 actaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 39029078 - 39029204
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttc 106  Q
    |||||||||||||||| |||||||| || ||| | | ||| ||||||| ||||||||||| || |||||||||         |||||||||| ||||| |    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttc-gtgtattgtacacagccttaccct--gttttttacacaagaggctgtttcc 39029174  T
Q  107 aagacttgaactcgtgaccttttagtcaca 136  Q
    ||| |||||||   ||||||||||||||||    
T  39029175 aaggcttgaacctatgaccttttagtcaca 39029204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 21489203 - 21489144
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgca 69  Q
    ||||||||||||||||||||||  |||||||| | ||| |||||| |||| ||||||||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttt-ggtgcattgtacgca 21489144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 25343306 - 25343234
Alignment:
Q  7 ctaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||| | |||||||||| ||| ||||||| | | | | |||| ||||||||||||||| |||||||||    
T  25343306 ctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccct 25343234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 47482870 - 47482914
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcatttt 53  Q
    ||||||||||||||||||||||| |||||||| | ||| ||||||    
T  47482870 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 47482914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 59097 - 58969
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||| |||||||||||| | ||| |||||| |||||||||||||||  ||||||||         | |||||||| |||||     
T  59097 actaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccct--gttttttatacaagaggctgtttc 59000  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  58999 caggacttgaacccgtgacctttcagtcaca 58969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 1604 - 1728
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||| ||||| |||||||| | |||||||||  ||||||||||| ||| ||||| |||         |||||||||||||||||    
T  1604 actaaagctcccgcatacgccgggtccgggaaggggtcccatcattt--ggtgtattgtatgcagccttatcct----gttttacacaagaggttgtttt 1697  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| | |||||||| |||||||    
T  1698 caggacttgaacccatgacctttcagtcaca 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 18512473 - 18512587
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    ||||||||||||||||||||||| |||||||| | ||| ||  |||||||||||||||||| ||||||||||        |||||||| ||||||| ||     
T  18512473 aaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcagccttacccta---tttttacacaagatgttgtttccag 18512567  T
Q  109 gacttgaactcgtgaccttt 128  Q
    ||||||||| ||||||||||    
T  18512568 gacttgaacccgtgaccttt 18512587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 34626225 - 34626296
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||  ||||||||| ||||| |||||||||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccaccattt--ggtgtattgaacgcagccttaccct 34626296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 3469192 - 3469265
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||| |||||||| ||||||| | ||  |||||| |||||||||||||||||| ||||||    
T  3469192 actaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccct 3469265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 10693085 - 10693214
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |    
T  10693085 agtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----cttttacacaagaggct 10693178  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||| || ||||||||| |||||||||| |||||||    
T  10693179 gtttccaggacttgaacccgtgacctttcagtcaca 10693214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 33871927 - 33872052
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||| ||||||| |||||||||||||||| | ||| |||||  ||||||||||||||| ||||| |||         ||||||||||||||||     
T  33871927 actaaagctctcgcatacacagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttatcct---gtttttacacaagaggttgtttc 33872021  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| || ||||||| |||||||    
T  33872022 caggacttgaacccgcgacctttcagtcaca 33872052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 8148963 - 8149077
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||| ||| |||||||||| | ||||||||||| | ||| |||||  ||||||||||||||||||||||||||        ||||||||||| |||||    
T  8148963 actaaaactctcgcatacgcaag-tctgggaaggggtcccaccattt--ggtgtattgtacgcaaccttacccta-ttttttaacacaagaggtagtttt 8149058  T
Q  106 caagacttgaactcgtgac 124  Q
    || ||||||||||||||||    
T  8149059 caggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 19266564 - 19266497
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||| |||||||||| |||  ||||  ||||||||||||||| |||||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaattt--ggtgtattgtacgcagccttaccct 19266497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 27889329 - 27889399
Alignment:
Q  2 gtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctt 74  Q
    |||||| ||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| ||||    
T  27889329 gtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 7879752 - 7879687
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||    
T  7879752 aagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttacc 7879687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 48735139 - 48735264
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| ||||||| |         ||||||||||||||||     
T  48735139 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccgt----gttttacacaagaggttgtttc 48735232  T
Q  106 caa-gacttgaactcgtgaccttttagtcaca 136  Q
    ||| ||||||||| |||||||||| |||||||    
T  48735233 caaggacttgaacccgtgacctttcagtcaca 48735264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 2541036 - 2541154
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||||||||||||||||||||||| | |||||||| | ||| |||||  ||||||| ||||||| |||||||||         |||||||||| |||||     
T  2541036 actaaagctcccgcatacgcagggaccgggaaggggtcccaccattt--ggtgtatagtacgcagccttaccct--gttttttacacaagaggctgtttc 2541131  T
Q  106 caagacttgaactcgtgaccttt 128  Q
    || ||||||||| ||||||||||    
T  2541132 caggacttgaacccgtgaccttt 2541154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 21172026 - 21172142
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||||| |||||     
T  21172026 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaggctgtttc 21172119  T
Q  106 caagacttgaactcgtgaccttt 128  Q
    || ||||||||| ||||||||||    
T  21172120 caggacttgaacccgtgaccttt 21172142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 42391117 - 42391241
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||         |||||||| | |||||     
T  42391117 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct----gttttacacaagaagctgtttc 42391210  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||| |||||||    
T  42391211 caggacttgaacccgtgacctttcagtcaca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 45018940 - 45019010
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatca--ttttcggtgtattgtacgcaacctt 74  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||  |||| ||| ||||||||||| ||||    
T  45018940 actaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagcctt 45019010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 47716576 - 47716451
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgttttcaa 108  Q
    |||||||||||||| || ||||| |||||||| | ||| |||| | ||||||||||||||| |||||||||         |||||||||| ||||| ||     
T  47716576 aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--gttttttacacaagaggctgtttccag 47716479  T
Q  109 gacttgaactcgtgaccttttagtcaca 136  Q
    ||||||||| |||||||||  |||||||    
T  47716478 gacttgaacccgtgaccttccagtcaca 47716451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 42805644 - 42805516
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    ||||||||||||||||| || ||||| |||||||| | ||| |||| | |||||||||||| || |||||||||         |||||||||| |||||     
T  42805644 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccct--gttttttacacaagaggctgtttc 42805547  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || ||||||||| |||||||||  |||||||    
T  42805546 caggacttgaacccgtgaccttccagtcaca 42805516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 39124010 - 39123945
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaacctt 74  Q
    ||||||||| ||||||||||||| |||||||| | ||| |||||| |||||||| |||||| ||||    
T  39124010 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 39123945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 23231675 - 23231606
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||| |||||||||||||||  |||||||| | ||||||  ||||||||||| |||||| |||||||    
T  23231675 actaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagccttacc 23231606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 35787290 - 35787355
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||||||||||| |||| |||||||| | ||  |||||  |||||||||||||||||||||||    
T  35787290 aagctcccgcatacgcaaggtccgggaaggggtcccgccattt--ggtgtattgtacgcaaccttacc 35787355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 38262213 - 38262282
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||||||||||||||||| ||  |||||||| | |||||||||  ||||||||||| ||||| |||||    
T  38262213 actaaagctcccgcatacgcagtgttcgggaaggggtcccatcattt--ggtgtattgtatgcaacattacc 38262282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 38604642 - 38604573
Alignment:
Q  8 taaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||||||||| || ||||| |  || |||||  ||||||||||||||| |||||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccattt--ggtgtattgtacgcagccttaccct 38604573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 42495879 - 42495915
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggat 42  Q
    |||||||||||||||||||||||||| ||||||||||    
T  42495879 actaaagctcccgcatacgcagggtccgggaagggat 42495915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 31591203 - 31591242
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttt 128  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  31591203 acacaagaggttgtttccaggacttgaactcgtgaccttt 31591242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 32758377 - 32758253
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  |||||||||||| || |||||||||         |||||||||| |||||     
T  32758377 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacacagccttaccct----gttttacacaagaggctgtttc 32758284  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||  ||||||||| |||||||    
T  32758283 caggacttgaacctgtgacctttcagtcaca 32758253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 43557589 - 43557522
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttac 76  Q
    ||||||||||||||||||| ||| |||| ||| | ||| |||| | ||||||||||||||| ||||||    
T  43557589 aaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttac 43557522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 35334833 - 35334904
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    ||||||||||| |||||||||||||| |||||||| | ||| ||  ||||||||||||||| ||  ||||||||    
T  35334833 actaaagctcctgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagtcttaccct 35334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 36602565 - 36602535
Alignment:
Q  6 actaaagctcccgcatacgcagggtctggga 36  Q
    |||||||||||||||||||||||||||||||    
T  36602565 actaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 11458374 - 11458407
Alignment:
Q  103 tttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||| |||||||||||||||||||||||||||||    
T  11458374 tttctagacttgaactcgtgaccttttagtcaca 11458407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 17048832 - 17048904
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||  |||| ||| | || |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  17048832 actaaagctcctacataagcaagttccgggaaggggttccaccatttt-ggtgtattgtacgtaaccttaccct 17048904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 28362165 - 28362231
Alignment:
Q  9 aaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||| |||| ||| ||||||||||||| | ||| |||||  ||||||||||||||| |||||||    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttacc 28362231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 33500625 - 33500560
Alignment:
Q  14 tcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||||||||||||||||| |||||||| | ||| ||||||  |||||| |||||||  ||||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccct 33500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 40463990 - 40463924
Alignment:
Q  10 aagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccc 78  Q
    |||||||||||||||||||||| | |||||| | ||| |||||  |||||||| |||||| ||||||||    
T  40463990 aagctcccgcatacgcagggtccgagaaggggtcccaccattt--ggtgtattatacgcagccttaccc 40463924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 42798787 - 42798718
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||| |||||||||||| |||||||| ||||| || | ||| |||||  ||||||||||||||| |||||||    
T  42798787 actatagctcccgcatatgcagggtccgggaaagggtcccaccattt--ggtgtattgtacgcagccttacc 42798718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 13041 - 13110
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    |||||||| |||||||||||||||||||||||||| | ||| ||  |||||||||||||||||| |||||||    
T  13041 actaaagcccccgcatacgcagggtctgggaaggggtcccacca--ttcggtgtattgtacgcagccttacc 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 10933 - 10802
Alignment:
Q  1 agtgtactaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggtt 100  Q
    |||| |||||||||||||||||||||||||| |||||||| | ||| |||||  ||||||||| ||||| || ||||||         ||||||||||||    
T  10933 agtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattggacgcagccctaccct--gttttttacacaagaggtt 10838  T
Q  101 gttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||   ||||||| |||||||||  |||||||    
T  10837 gttttcagaccttgaacccgtgaccttccagtcaca 10802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 48651 - 48722
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccct 79  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| |||||||||    
T  48651 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccct 48722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 24150 - 24220
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccc 78  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| ||||||||    
T  24150 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 3662 - 3593
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||| |||||||||||||||  |||||||| | ||||||  ||||||||||| |||||| |||||||    
T  3662 actaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagccttacc 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 4196 - 4149
Alignment:
Q  89 acacaagaggttgttttcaagacttgaactcgtgaccttttagtcaca 136  Q
    |||||||||||||||| || ||||||||| |||||||||| |||||||    
T  4196 acacaagaggttgtttccaggacttgaacccgtgacctttcagtcaca 4149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 30695 - 30571
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttaccctannnnnnnnacacaagaggttgtttt 105  Q
    |||| |||||||||||| |||||||| |||||||| | ||| |||||  ||||||||||||||| || ||||||         |||||||||| |||||     
T  30695 actagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagccctaccct----gttttacacaagaggctgtttc 30602  T
Q  106 caagacttgaactcgtgaccttttagtcaca 136  Q
    || |||||||||  ||||||||| |||||||    
T  30601 caggacttgaaccggtgacctttcagtcaca 30571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 72884 - 72953
Alignment:
Q  6 actaaagctcccgcatacgcagggtctgggaagggattccatcattttcggtgtattgtacgcaaccttacc 77  Q
    ||||||||||||||||||||||| || |||||||| | | | |||||  ||||||||||| ||| |||||||    
T  72884 actaaagctcccgcatacgcaggttccgggaaggggtactaccattt--ggtgtattgtaggcagccttacc 72953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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