View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2096_high_12 (Length: 251)
Name: NF2096_high_12
Description: NF2096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2096_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 14839850 - 14839621
Alignment:
| Q |
1 |
acaacaataagaatcaaatatatataccaactttcgaattcattcaaacccacttcatattttctaaatgcaattcacagaaagaaaattaaaaccctaa |
100 |
Q |
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| T |
14839850 |
acaacaataagaatcaaatatata--ccaactttcgaattcattcaaacccacttcatattttctaaatgcaattcacagaaagaaaattaaaaccctca |
14839753 |
T |
|
| Q |
101 |
gattggaacttgaatcaacaaaattttgaattaannnnnnnaacaatagaatcattaacacgagagttgagagtgatgaaaagaggaaaggaattgaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
14839752 |
gattggaacttgaatcaacaaaattttgaattaatttttttaacattagaatcgttaacacgagagttgagagtgatgaaaaggggaaaggaattgaaat |
14839653 |
T |
|
| Q |
201 |
tttacctcaatgtgaaatttgggtatgagagc |
232 |
Q |
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||||||| ||| |||||||||||||||||||| |
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| T |
14839652 |
tttacctgaatatgaaatttgggtatgagagc |
14839621 |
T |
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