View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2096_low_11 (Length: 280)
Name: NF2096_low_11
Description: NF2096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2096_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 99 - 272
Target Start/End: Original strand, 30697391 - 30697565
Alignment:
| Q |
99 |
catcacacatcaattcttcaactgttcacactaacacctgattatgtcataaccacacatcaatggcacatcaa-ctttatctttnnnnnnntaaaacat |
197 |
Q |
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| T |
30697391 |
catcacacatcaattcttcaactgttcacactaacacctgattatgtcataaccacacatcaatggcacatcaaactttttctttgaaaaaataaaacat |
30697490 |
T |
|
| Q |
198 |
caactttttatctattgttatttaataataattaatatttattaccaaaccaagtaattcctcatttttcatctc |
272 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30697491 |
caactttttatctattattatttaataataattaatatttattaccaaaccaagtaattcctcatttttcatctc |
30697565 |
T |
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