View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2096_low_7 (Length: 345)
Name: NF2096_low_7
Description: NF2096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2096_low_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 13 - 345
Target Start/End: Original strand, 36285243 - 36285576
Alignment:
| Q |
13 |
atactgggctggcaaggggactacaaggattcctgttagtggagtttatggtccccttatatcggctttctctattgtttctggtgagtcatatcatact |
112 |
Q |
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| T |
36285243 |
atactgggctggcaaggggactacaaggattcctgttagtggagtttatggtccccttatatcggctttctctattgtttctggtgagtcatatcatact |
36285342 |
T |
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| Q |
113 |
ttaacttgtgtattggcatattaatgtggggcgaatatttggtactcattttatcacaagataacatcctaattactaactgcttggatcattttacata |
212 |
Q |
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| T |
36285343 |
ttaacttgtgaattggcatattaatgtggggtgaatatttggtactcattttatcacaagataacatcctaattactaactgcttggatcattttacata |
36285442 |
T |
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| Q |
213 |
tttcaattatttttaagggatattggaacattcaacttcaaaatgatgctgtattat-catagttatctatgcaattcaaacaagctgtatacataatta |
311 |
Q |
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| T |
36285443 |
tttcaattatttttaagggatattggaacattcaacttcaaaatgatgctgtattatgcatagttatctatgcaattcaaacaagctgtatacataatta |
36285542 |
T |
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| Q |
312 |
aaggcatgctaatacgactcctctcacattctcc |
345 |
Q |
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| T |
36285543 |
aaggcatgctaatatgactcctctcacattctcc |
36285576 |
T |
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