View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20970_high_18 (Length: 211)
Name: NF20970_high_18
Description: NF20970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20970_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 30399942 - 30400127
Alignment:
| Q |
10 |
catcatcaccaacataaaaatgcaaccttttagtttcatcctctcattttctttcacccatttcaaccataacacttcatttcacctcaatcttcaaaac |
109 |
Q |
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| T |
30399942 |
catcatcaccaacataaaaatgcaaccttttagtttcatcctctcattttctttcacccatttcaaccataacacttcatttcacctcaatcttcaaaac |
30400041 |
T |
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| Q |
110 |
aatgcaacacattgttacataacaatgcagtggtagtttagttttacttcattatagatctcacccatcttccagaatctaaaaaa |
195 |
Q |
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| T |
30400042 |
aatgcaacacattgttacataacaatgcagtggtagtttagttttacttcattatagatctcacccatcttccggaatctaaaaaa |
30400127 |
T |
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