View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20973_high_10 (Length: 316)
Name: NF20973_high_10
Description: NF20973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20973_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 44851472 - 44851721
Alignment:
| Q |
19 |
ggacatcatcatagaccaagaagatcctttcaaactaaatatagaaaaaagccatattgacaaaatagatcttctcttagaggaagagccactctgctat |
118 |
Q |
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| T |
44851472 |
ggacatcattatagaccaagaagatcctttcaaactaaatatagaaaaaagccatattgacaaaatagatcttctcttagaggaagagccactctgctat |
44851571 |
T |
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| Q |
119 |
gcacagttaaagaatatgtcagcatctaaatcagaagaatttgattttttcgatgagcttgaggagttacctatgtcttcatctattttacactttacga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851572 |
gcacagttaaagaatatgtcagcatctaaatcagaagaatttgattttttcgatgagcttgaggagttacctatgtcttcatctattttacactttacga |
44851671 |
T |
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| Q |
219 |
ggagcattttttctgatgaaaggattcctgttgccccttcttgattgatt |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44851672 |
ggagcattttttctgatgaaaggattcctgttgccccttcttgattgatt |
44851721 |
T |
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