View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20973_high_6 (Length: 341)
Name: NF20973_high_6
Description: NF20973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20973_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 56 - 320
Target Start/End: Complemental strand, 31954339 - 31954075
Alignment:
| Q |
56 |
acctgtggttcttttgaacattttgctagggattgcatgcgtggaggcggtaacaacaacaacggtggcggtggatatggtggtggaagcccatcttgct |
155 |
Q |
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| T |
31954339 |
acctgtggttcttttgaacattttgctagggattgcatgcgtggaggcggtaacaacaacaacggtggcggtggatatggtggtggaggcacatcttgct |
31954240 |
T |
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| Q |
156 |
acaggtgtggtggggttggtcacatagcaagagattgcgctactcctagtagcggaggtggtggaggcggcgcttgctataagtgcggtgaggtgggtca |
255 |
Q |
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| T |
31954239 |
acaggtgtggtggggttggtcacatagcaagagattgcgctactcctagtagcggaggtggtggaggcggcgcttgctataagtgcggtgaggtgggtca |
31954140 |
T |
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| Q |
256 |
catagctagggattgcagcaatgaagggggaaggtttgatggtggcaatggaaggtatgatgatg |
320 |
Q |
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| T |
31954139 |
catagctagggattgcagcaatgaaggaggaaggtttgatggtggcaatggaaggtatgatgatg |
31954075 |
T |
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