View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20975_low_12 (Length: 268)
Name: NF20975_low_12
Description: NF20975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20975_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 29911500 - 29911242
Alignment:
| Q |
1 |
ttcttctgctaattaaactaattgagcaatttttatgtttaaaatttaaaatgctaacacttgacatgttgagaaaaagaattaattgaaagtaatcaca |
100 |
Q |
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| T |
29911500 |
ttcttctgctaattaaactaattgagcaatttttatgtttaaaatttaaaatgctaacacttgacatgttgagaaaaagaattaattgaaagtaatcaca |
29911401 |
T |
|
| Q |
101 |
tcacatgtgttgtgtcagtgttgaacaccggacacacgtttgatcagaggtgttagtgttacttggtttgatttcgtgattaacttgtgattagttggta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
29911400 |
tcacatgtgttgtgtcagtgttgaacaccggacacacgtttgatcagaggtgttagtgttacttggtttggtttcgtgattaacttgtgattagttggta |
29911301 |
T |
|
| Q |
201 |
tattcctcttatgttagtgatatttatgtagtattatgattaacttgtgttagtattat |
259 |
Q |
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||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
29911300 |
tattcttcttatgttagtgatatttatatagtattatgattaacttgtgttagtattat |
29911242 |
T |
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