View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20976_low_1 (Length: 1065)

Name: NF20976_low_1
Description: NF20976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20976_low_1
NF20976_low_1
[»] chr5 (38 HSPs)
chr5 (723-1052)||(4077935-4078264)
chr5 (700-1052)||(16351765-16352110)
chr5 (469-650)||(36057556-36057737)
chr5 (469-642)||(30468223-30468396)
chr5 (469-650)||(17574318-17574498)
chr5 (469-650)||(34327635-34327816)
chr5 (469-650)||(2179787-2179968)
chr5 (469-650)||(7267843-7268023)
chr5 (469-650)||(8539675-8539856)
chr5 (469-647)||(18624951-18625129)
chr5 (469-650)||(24541154-24541336)
chr5 (701-814)||(40946803-40946919)
chr5 (469-650)||(2854271-2854450)
chr5 (561-650)||(12738736-12738825)
chr5 (561-650)||(12801559-12801648)
chr5 (469-546)||(28819391-28819468)
chr5 (561-651)||(30463899-30463989)
chr5 (563-647)||(41493847-41493931)
chr5 (467-586)||(18728543-18728662)
chr5 (273-391)||(697637-697755)
chr5 (500-650)||(29621755-29621905)
chr5 (561-650)||(8541271-8541360)
chr5 (561-650)||(32134231-32134320)
chr5 (467-571)||(38597024-38597128)
chr5 (559-640)||(43492131-43492212)
chr5 (467-586)||(32087578-32087697)
chr5 (544-650)||(42473625-42473731)
chr5 (561-650)||(21842992-21843081)
chr5 (521-569)||(15459184-15459232)
chr5 (470-586)||(38178037-38178153)
chr5 (470-586)||(38205261-38205377)
chr5 (516-632)||(40780568-40780684)
chr5 (469-608)||(24496785-24496924)
chr5 (603-650)||(34328869-34328916)
chr5 (515-586)||(35292371-35292442)
chr5 (318-420)||(22687217-22687319)
chr5 (561-650)||(2852886-2852975)
chr5 (561-650)||(7269446-7269535)
[»] chr2 (43 HSPs)
chr2 (783-1052)||(26449244-26449519)
chr2 (469-650)||(2766934-2767115)
chr2 (469-647)||(17696209-17696387)
chr2 (469-650)||(39664711-39664892)
chr2 (469-650)||(44709708-44709889)
chr2 (469-650)||(19908209-19908391)
chr2 (469-650)||(14389047-14389228)
chr2 (469-650)||(40560223-40560404)
chr2 (469-650)||(16763076-16763256)
chr2 (469-585)||(42519168-42519284)
chr2 (469-650)||(39455169-39455350)
chr2 (469-628)||(6797529-6797688)
chr2 (483-608)||(16377174-16377299)
chr2 (469-635)||(37645502-37645668)
chr2 (560-647)||(31475079-31475166)
chr2 (278-435)||(27739085-27739242)
chr2 (544-650)||(19581414-19581520)
chr2 (352-426)||(31902961-31903035)
chr2 (500-650)||(37020508-37020658)
chr2 (525-650)||(6786000-6786125)
chr2 (358-422)||(29486399-29486463)
chr2 (467-586)||(29909601-29909720)
chr2 (467-613)||(39338-39484)
chr2 (525-631)||(24208061-24208167)
chr2 (467-635)||(37417288-37417456)
chr2 (513-640)||(7744053-7744180)
chr2 (534-585)||(15372564-15372615)
chr2 (513-596)||(17946148-17946231)
chr2 (701-756)||(26449186-26449241)
chr2 (469-571)||(62763-62865)
chr2 (561-651)||(40561878-40561968)
chr2 (469-567)||(42879438-42879536)
chr2 (351-404)||(2062251-2062304)
chr2 (561-650)||(14387349-14387438)
chr2 (561-650)||(16376736-16376825)
chr2 (561-650)||(16764611-16764700)
chr2 (561-650)||(34400314-34400403)
chr2 (561-650)||(39663154-39663243)
chr2 (568-652)||(19906680-19906764)
chr2 (526-569)||(11315335-11315378)
chr2 (560-635)||(37646477-37646552)
chr2 (469-571)||(15807862-15807964)
chr2 (469-571)||(32608010-32608112)
[»] chr8 (57 HSPs)
chr8 (469-647)||(26242277-26242455)
chr8 (460-650)||(13282478-13282667)
chr8 (469-650)||(7745075-7745256)
chr8 (477-651)||(41042555-41042729)
chr8 (469-647)||(42941777-42941955)
chr8 (469-650)||(8609751-8609931)
chr8 (469-650)||(13486062-13486243)
chr8 (469-635)||(9673128-9673294)
chr8 (472-647)||(41825610-41825785)
chr8 (469-654)||(13108300-13108484)
chr8 (469-650)||(38547228-38547408)
chr8 (473-650)||(22272334-22272513)
chr8 (469-649)||(5036446-5036630)
chr8 (469-650)||(27691154-27691335)
chr8 (472-629)||(40339646-40339801)
chr8 (573-653)||(26238723-26238803)
chr8 (561-652)||(42943426-42943517)
chr8 (561-650)||(22273891-22273980)
chr8 (471-650)||(33708769-33708947)
chr8 (573-650)||(34681078-34681155)
chr8 (718-814)||(26955544-26955649)
chr8 (467-586)||(33750325-33750444)
chr8 (273-404)||(37987530-37987661)
chr8 (707-781)||(30850093-30850167)
chr8 (561-655)||(38548831-38548925)
chr8 (358-431)||(9519057-9519130)
chr8 (573-650)||(43262149-43262226)
chr8 (467-583)||(38882738-38882854)
chr8 (473-640)||(9184393-9184560)
chr8 (467-586)||(37525964-37526083)
chr8 (467-586)||(42897715-42897834)
chr8 (469-566)||(11788405-11788502)
chr8 (561-650)||(29239187-29239276)
chr8 (561-650)||(33761069-33761158)
chr8 (516-632)||(15305815-15305931)
chr8 (516-632)||(15486184-15486300)
chr8 (561-653)||(27692837-27692929)
chr8 (534-586)||(31201151-31201203)
chr8 (561-650)||(601704-601793)
chr8 (561-650)||(5038062-5038150)
chr8 (515-608)||(8654542-8654634)
chr8 (561-650)||(33762713-33762802)
chr8 (573-650)||(41823890-41823967)
chr8 (606-650)||(600760-600804)
chr8 (582-650)||(13484545-13484613)
chr8 (701-740)||(26955505-26955544)
chr8 (475-586)||(31821482-31821593)
chr8 (469-567)||(11722752-11722850)
chr8 (561-635)||(13283995-13284069)
chr8 (358-428)||(34866632-34866702)
chr8 (561-651)||(35510819-35510909)
chr8 (469-571)||(37801545-37801647)
chr8 (539-640)||(5075378-5075479)
chr8 (362-443)||(10551748-10551829)
chr8 (561-650)||(13106804-13106893)
chr8 (561-650)||(29237151-29237240)
chr8 (561-650)||(35509214-35509303)
[»] chr3 (62 HSPs)
chr3 (469-650)||(51684610-51684791)
chr3 (469-650)||(27899044-27899225)
chr3 (469-650)||(53190723-53190903)
chr3 (469-650)||(21348723-21348904)
chr3 (469-648)||(43765139-43765318)
chr3 (700-877)||(44712346-44712522)
chr3 (472-650)||(30599884-30600062)
chr3 (469-647)||(42279510-42279688)
chr3 (469-650)||(46112487-46112668)
chr3 (469-653)||(23293133-23293317)
chr3 (472-650)||(17515310-17515488)
chr3 (469-652)||(2226116-2226298)
chr3 (469-650)||(54898437-54898617)
chr3 (469-652)||(41977748-41977930)
chr3 (469-631)||(35905676-35905837)
chr3 (469-586)||(48830769-48830886)
chr3 (469-647)||(2377032-2377210)
chr3 (469-576)||(44276159-44276266)
chr3 (481-608)||(46197762-46197889)
chr3 (469-571)||(7884837-7884938)
chr3 (469-554)||(600805-600890)
chr3 (469-650)||(44794208-44794388)
chr3 (469-652)||(3152181-3152364)
chr3 (469-642)||(2660220-2660393)
chr3 (561-647)||(42282473-42282559)
chr3 (469-640)||(40508854-40509025)
chr3 (573-650)||(48829356-48829433)
chr3 (467-586)||(33852611-33852730)
chr3 (573-652)||(51686406-51686485)
chr3 (484-594)||(19987572-19987682)
chr3 (561-650)||(611222-611311)
chr3 (561-650)||(23291570-23291659)
chr3 (467-640)||(23774162-23774334)
chr3 (561-650)||(30598337-30598426)
chr3 (561-650)||(44267981-44268070)
chr3 (700-781)||(51646976-51647057)
chr3 (709-781)||(8507122-8507194)
chr3 (469-572)||(5125879-5125982)
chr3 (467-586)||(31887393-31887512)
chr3 (469-567)||(5133079-5133177)
chr3 (561-651)||(7883327-7883417)
chr3 (561-651)||(46308806-46308896)
chr3 (561-650)||(38193510-38193599)
chr3 (561-650)||(41979352-41979441)
chr3 (561-650)||(53094273-53094362)
chr3 (561-652)||(44795890-44795981)
chr3 (515-586)||(48633941-48634012)
chr3 (561-651)||(54900074-54900164)
chr3 (191-252)||(2394820-2394881)
chr3 (561-650)||(3150252-3150341)
chr3 (467-640)||(23888713-23888886)
chr3 (707-780)||(32077375-32077448)
chr3 (604-651)||(7884942-7884989)
chr3 (561-652)||(35903823-35903914)
chr3 (561-652)||(38191893-38191984)
chr3 (561-652)||(46611303-46611394)
chr3 (561-652)||(53092621-53092712)
chr3 (534-640)||(41021011-41021117)
chr3 (467-640)||(18430212-18430385)
chr3 (561-650)||(46310436-46310525)
chr3 (561-650)||(46609149-46609238)
chr3 (561-650)||(53187742-53187831)
[»] chr7 (55 HSPs)
chr7 (722-877)||(18941120-18941276)
chr7 (469-650)||(39859172-39859353)
chr7 (469-647)||(24228352-24228530)
chr7 (469-647)||(34776858-34777036)
chr7 (469-647)||(37796124-37796302)
chr7 (490-650)||(37115490-37115650)
chr7 (469-652)||(38474086-38474269)
chr7 (472-650)||(30940371-30940549)
chr7 (469-650)||(6602335-6602516)
chr7 (473-650)||(47386156-47386333)
chr7 (470-594)||(45359392-45359516)
chr7 (473-606)||(48852294-48852427)
chr7 (469-628)||(13168142-13168304)
chr7 (469-652)||(29996457-29996640)
chr7 (469-580)||(35693313-35693424)
chr7 (469-650)||(27666008-27666189)
chr7 (469-653)||(56327-56511)
chr7 (469-571)||(23906204-23906306)
chr7 (561-650)||(13169683-13169772)
chr7 (469-540)||(46439473-46439544)
chr7 (513-647)||(13018036-13018172)
chr7 (500-651)||(20478041-20478192)
chr7 (560-641)||(13039641-13039722)
chr7 (467-640)||(27955380-27955553)
chr7 (469-586)||(33038740-33038857)
chr7 (569-650)||(38549547-38549628)
chr7 (352-428)||(3420234-3420310)
chr7 (358-422)||(38484991-38485055)
chr7 (467-586)||(46996643-46996762)
chr7 (561-647)||(6605397-6605483)
chr7 (534-640)||(8423289-8423395)
chr7 (561-642)||(35691435-35691516)
chr7 (561-650)||(46437107-46437196)
chr7 (467-586)||(23953869-23953988)
chr7 (561-647)||(39857648-39857734)
chr7 (561-650)||(23904583-23904672)
chr7 (561-650)||(35403619-35403708)
chr7 (561-650)||(47384294-47384383)
chr7 (561-649)||(24226582-24226670)
chr7 (480-555)||(1546382-1546457)
chr7 (467-586)||(2167543-2167662)
chr7 (534-613)||(35344298-35344377)
chr7 (469-567)||(6056849-6056947)
chr7 (561-647)||(48227941-48228027)
chr7 (561-650)||(22155847-22155936)
chr7 (561-650)||(22211762-22211851)
chr7 (561-650)||(37113941-37114030)
chr7 (358-427)||(38305676-38305745)
chr7 (467-567)||(40784429-40784529)
chr7 (567-650)||(46439539-46439622)
chr7 (469-571)||(23962383-23962485)
chr7 (561-647)||(27664433-27664519)
chr7 (351-420)||(1320133-1320202)
chr7 (589-650)||(23906295-23906356)
chr7 (561-650)||(35401969-35402058)
[»] chr4 (43 HSPs)
chr4 (469-647)||(41761689-41761867)
chr4 (473-650)||(48813787-48813964)
chr4 (474-650)||(41781539-41781715)
chr4 (469-649)||(49523125-49523305)
chr4 (469-610)||(42980675-42980816)
chr4 (469-635)||(11601686-11601851)
chr4 (473-651)||(35404392-35404570)
chr4 (469-631)||(48646690-48646852)
chr4 (469-650)||(51011926-51012106)
chr4 (469-647)||(2693196-2693373)
chr4 (469-637)||(52868092-52868260)
chr4 (469-650)||(43519424-43519605)
chr4 (469-631)||(7149558-7149720)
chr4 (560-649)||(20819986-20820075)
chr4 (467-585)||(35996128-35996246)
chr4 (515-640)||(2350496-2350621)
chr4 (561-650)||(35401749-35401838)
chr4 (702-781)||(47965437-47965516)
chr4 (573-650)||(48645255-48645332)
chr4 (467-586)||(2827468-2827587)
chr4 (561-640)||(39345574-39345653)
chr4 (561-652)||(43508653-43508744)
chr4 (534-640)||(44794768-44794874)
chr4 (534-608)||(47941853-47941927)
chr4 (560-629)||(2691394-2691463)
chr4 (561-650)||(4173740-4173829)
chr4 (561-650)||(20493827-20493916)
chr4 (561-650)||(43507167-43507256)
chr4 (561-650)||(49524733-49524822)
chr4 (702-877)||(52525719-52525911)
chr4 (534-640)||(10372714-10372820)
chr4 (350-404)||(38929123-38929177)
chr4 (573-635)||(54387894-54387955)
chr4 (581-642)||(11254127-11254188)
chr4 (358-431)||(31051223-31051296)
chr4 (273-333)||(46699597-46699657)
chr4 (467-550)||(4519476-4519559)
chr4 (561-651)||(319272-319362)
chr4 (534-640)||(10762591-10762697)
chr4 (513-571)||(44972490-44972548)
chr4 (561-650)||(4169686-4169775)
chr4 (561-650)||(33266010-33266099)
chr4 (561-642)||(43521109-43521190)
[»] chr6 (34 HSPs)
chr6 (469-650)||(6899485-6899666)
chr6 (469-640)||(10568409-10568580)
chr6 (469-649)||(11355223-11355403)
chr6 (469-649)||(20523367-20523547)
chr6 (469-600)||(9398710-9398841)
chr6 (469-635)||(14338418-14338584)
chr6 (469-650)||(32439035-32439215)
chr6 (469-571)||(7049836-7049938)
chr6 (469-650)||(13613525-13613706)
chr6 (469-650)||(32516877-32517058)
chr6 (481-647)||(7372913-7373079)
chr6 (701-781)||(23073336-23073416)
chr6 (573-641)||(33276810-33276878)
chr6 (588-650)||(8605352-8605414)
chr6 (711-781)||(34008752-34008822)
chr6 (573-650)||(6902910-6902986)
chr6 (516-632)||(3456766-3456882)
chr6 (467-586)||(3018373-3018492)
chr6 (581-650)||(7371175-7371244)
chr6 (573-650)||(10569931-10570008)
chr6 (467-586)||(2968203-2968322)
chr6 (534-640)||(4641365-4641471)
chr6 (561-651)||(9400035-9400125)
chr6 (516-650)||(32455881-32456015)
chr6 (561-650)||(11357194-11357283)
chr6 (561-650)||(32518497-32518586)
chr6 (603-647)||(21091109-21091153)
chr6 (573-628)||(7051257-7051312)
chr6 (838-877)||(34008885-34008924)
chr6 (603-641)||(7049795-7049833)
chr6 (469-571)||(11163879-11163981)
chr6 (573-647)||(21068628-21068702)
chr6 (534-640)||(29077338-29077444)
chr6 (561-650)||(18645104-18645192)
[»] chr1 (47 HSPs)
chr1 (469-650)||(31238438-31238619)
chr1 (469-650)||(2869579-2869760)
chr1 (469-650)||(6818621-6818802)
chr1 (469-650)||(4855910-4856090)
chr1 (469-650)||(25278311-25278492)
chr1 (469-650)||(27087283-27087463)
chr1 (469-650)||(37344342-37344523)
chr1 (469-650)||(50556040-50556221)
chr1 (469-614)||(15104477-15104622)
chr1 (469-650)||(34778082-34778262)
chr1 (490-642)||(51896116-51896268)
chr1 (469-650)||(3013413-3013600)
chr1 (469-650)||(46583499-46583680)
chr1 (548-650)||(25278975-25279077)
chr1 (469-647)||(33602587-33602765)
chr1 (472-647)||(52643566-52643736)
chr1 (469-640)||(51121915-51122086)
chr1 (500-650)||(9121642-9121792)
chr1 (467-586)||(36895451-36895570)
chr1 (573-650)||(25278854-25278931)
chr1 (561-650)||(31236819-31236908)
chr1 (573-650)||(52641888-52641965)
chr1 (561-647)||(3011858-3011944)
chr1 (467-557)||(31801726-31801816)
chr1 (563-650)||(8167942-8168029)
chr1 (467-586)||(42134546-42134665)
chr1 (467-586)||(46638748-46638867)
chr1 (700-781)||(20602309-20602389)
chr1 (574-650)||(37088149-37088225)
chr1 (282-420)||(19597878-19598016)
chr1 (469-572)||(43868692-43868795)
chr1 (561-640)||(51894577-51894656)
chr1 (353-431)||(31586273-31586351)
chr1 (561-651)||(34776568-34776658)
chr1 (516-650)||(47013072-47013206)
chr1 (561-650)||(26223587-26223676)
chr1 (561-650)||(27089279-27089368)
chr1 (527-640)||(35479976-35480089)
chr1 (561-650)||(46582010-46582099)
chr1 (561-653)||(8169568-8169660)
chr1 (192-252)||(24450635-24450695)
chr1 (534-586)||(27940672-27940724)
chr1 (352-428)||(41919892-41919968)
chr1 (467-567)||(45380925-45381025)
chr1 (561-649)||(50554164-50554252)
chr1 (318-420)||(24450450-24450551)
chr1 (561-650)||(37345962-37346051)
[»] scaffold0058 (3 HSPs)
scaffold0058 (473-650)||(3294-3471)
scaffold0058 (473-650)||(4466-4643)
scaffold0058 (561-650)||(14343-14432)
[»] scaffold1454 (1 HSPs)
scaffold1454 (469-647)||(1266-1443)
[»] scaffold0564 (1 HSPs)
scaffold0564 (469-648)||(8264-8441)
[»] scaffold0024 (1 HSPs)
scaffold0024 (469-567)||(37287-37385)
[»] scaffold0002 (1 HSPs)
scaffold0002 (574-642)||(436273-436341)
[»] scaffold0477 (1 HSPs)
scaffold0477 (534-640)||(6642-6748)
[»] scaffold0345 (1 HSPs)
scaffold0345 (561-650)||(1555-1644)
[»] scaffold0092 (1 HSPs)
scaffold0092 (469-571)||(36793-36895)


Alignment Details
Target: chr5 (Bit Score: 306; Significance: 1e-172; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 723 - 1052
Target Start/End: Original strand, 4077935 - 4078264
Alignment:
Q  723 atccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaactacacttcacaccaatattctcctccactttccaatattca 822  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4077935 atccatctgtttccaataaacaatttctttcaattttaagtcacaagttcattggtaactacacttcacaccaatattctcctctactttccaatattca 4078034  T
Q  823 cccaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccactgccgaaggcacatctcctccctcctcttggcccaccatcgaaga 922  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  4078035 cctaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccactaccgaaggcacatctcctccctcctcttggcccaccaccgaaga 4078134  T
Q  923 caactccctgtcttcagcctaatttcttatttccttcctgtttaccacaattttctcactcacgtaagctctctctgtaccgctttctctctcccccata 1022  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4078135 caactccctgtcttcagcctaatttcttatttccttcctgtttaccacaattttctcactcacgtaagctctctctgtaccgctttctctctcccccata 4078234  T
Q  1023 actctatcctccattgttgtatctttctct 1052  Q
    ||||||||||||||||||||||||||||||    
T  4078235 actctatcctccattgttgtatctttctct 4078264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 700 - 1052
Target Start/End: Complemental strand, 16352110 - 16351765
Alignment:
Q  700 gaatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaactacacttcacaccaatat 799  Q
    |||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  16352110 gaatctattttgatctccgcacattccatctctttccaataaacaccttctttcaattttaagtcacaagtt-------aactacacttcacaccaatat 16352018  T
Q  800 tctcctccactttccaatattcacccaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccactgccgaaggcacatctcctccc 899  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16352017 tctcctccactttccaatattcacccaccactaccgaactctctctccatcgcctccctccgtcgtctcatcttccactgccgaaggcacatctcctccc 16351918  T
Q  900 tcctcttggcccaccatcgaagacaactccctgtcttcagcctaatttcttatttccttcctgtttaccacaattttctcactcacgtaagctctctctg 999  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16351917 tcctcttggcccaccaccgaagacaactccctgtcttcagcctaatttcttatttccttcctgtttaccacaattttctcactcacgtaagctctctctg 16351818  T
Q  1000 taccgctttctctctcccccataactctatcctccattgttgtatctttctct 1052  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16351817 taccgctttctctctcccccataactctatcctccattgttgtatctttctct 16351765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 36057556 - 36057737
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36057556 cacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 36057655  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||  |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||||||| |||||| |||||||    
T  36057656 ggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 469 - 642
Target Start/End: Original strand, 30468223 - 30468396
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  30468223 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaa 30468322  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||| |||||||||||||| ||||||| ||| || |||||| |  |||||| |||||||||||||||||||||||    
T  30468323 ggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattgagg 30468396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 17574498 - 17574318
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17574498 cacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 17574400  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  17574399 ggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 34327816 - 34327635
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34327816 cacgtgtacatgacaacgcaacatgcaagaggacacatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcag 34327717  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || ||||||||  ||||| ||||||||||||||||| |||||| |||||||    
T  34327716 ggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 2179968 - 2179787
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  2179968 cacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcag 2179869  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||||||| ||||||| ||  || |||||| | ||||||| ||||||||||||| || |||||| |||||||    
T  2179868 ggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattcaaggacaaatttgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 7268023 - 7267843
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||| || |||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  7268023 cacgtgtacaagacaacacatcatgcgag-ggacacgtcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcag 7267925  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||  ||||||| |||||||||||||||| |||||| |||||||    
T  7267924 ggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 8539856 - 8539675
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||  ||| ||| |||||||||||||| ||||||||||||    
T  8539856 cacgtgtacatgacaacacaacatgcaagaggacacaccatcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcag 8539757  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| |  ||| ||||||  |||||||| |||||||||||||||| |||||| |||||||    
T  8539756 ggactaaatagatatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 18624951 - 18625129
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| || ||||||||||||||||||  ||||||||||||    
T  18624951 cacgtgtataagacaacacaacatgcaagaagacacatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcag 18625050  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||| ||||||| ||  || ||||| ||||||   |||||||||||||||||| |||||| ||||    
T  18625051 ggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 24541154 - 24541336
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagg-gaccattttgatggacgtctgtaaaattca 567  Q
    |||||||||||||||||| | ||||||||| | ||||||| ||| | |||  || ||||||||| |||| ||  | ||||||||||||||||||||||||    
T  24541154 cacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattca 24541253  T
Q  568 gggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| ||||||||| |||||| |||||| |||||||    
T  24541254 gggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 701 - 814
Target Start/End: Original strand, 40946803 - 40946919
Alignment:
Q  701 aatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac-tacacttcacacca--at 797  Q
    |||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||| ||| |||| |||||||||| ||| ||||| ||||  ||    
T  40946803 aatctatgttgatctctacacaatccatctatttccaataaacattttctttcaattttaaatcataagtgcattggtaacgtacgcttcataccaatat 40946902  T
Q  798 attctcctccactttcc 814  Q
    |||||||||||||||||    
T  40946903 attctcctccactttcc 40946919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 2854271 - 2854450
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||| | ||||||||| | ||||||| ||| | ||| ||| ||||||||| ||||||| | |||| ||||||||||||||||||||    
T  2854271 cacgtgtacaagacaaca-agcatgcaagaagccacatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcag 2854369  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | ||| ||||  |||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  2854370 ggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 12738736 - 12738825
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 12801559 - 12801648
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 469 - 546
Target Start/End: Complemental strand, 28819468 - 28819391
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccatttt 546  Q
    |||||||||| |||| |||| |||| |||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  28819468 cacgtgtacatgacatcacatcatgtaagaggacacatcatcatcactaacggagcttttggacggagggaccatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 30463989 - 30463899
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| ||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtcg 30463899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 563 - 647
Target Start/End: Complemental strand, 41493931 - 41493847
Alignment:
Q  563 attcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||| ||| |||||||||||||| ||||||||    || ||||||||||||||||||||||||||||||||| |||||| ||||    
T  41493931 attcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 18728543 - 18728662
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| ||||||||  |||| |||| ||   ||||| ||||  |||||| |||||||| ||||||||||||||||  ||||||    
T  18728543 gccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattc 18728642  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  18728643 agggactaagttgatatttc 18728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 273 - 391
Target Start/End: Original strand, 697637 - 697755
Alignment:
Q  273 tcttgtcgctttttggtttagttgatatttacttcggcgacgacagccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgct 372  Q
    |||||||||||||| |||| |||| | |||||||||| | ||  |||||||||||||||||   ||  ||||| ||  |||||||||||| |||||||||    
T  697637 tcttgtcgcttttttgtttggttgttgtttacttcggtgccggaagccttctccttgtcactggcatgtgcctgtttacgatctaggttgagtttccgct 697736  T
Q  373 tcggaccagcgtcgctgcc 391  Q
    || |||| |||||||||||    
T  697737 tcagaccggcgtcgctgcc 697755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 500 - 650
Target Start/End: Original strand, 29621755 - 29621905
Alignment:
Q  500 gacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaa 599  Q
    ||||||||| ||| | |||||||  |||||||| |||||||   ||||||||||||||| |||||||||||| ||| | ||||||||  |||||| ||      
T  29621755 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggg 29621854  T
Q  600 acaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    || || ||||| ||||||| ||||||||| ||| |  |||||| |||||||    
T  29621855 acgaaattggccgatttttcaaaattcaatgactattttgaggtattagtc 29621905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 8541271 - 8541360
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| ||||||||| |||||| |||||| |||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

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Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 32134320 - 32134231
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| |||||||||||||  ||||||| | | || ||||||| |||||||||||||||||| ||| || |||||| |||||||    
T  32134320 aaattcagggactaaatagatattttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

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Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 467 - 571
Target Start/End: Complemental strand, 38597128 - 38597024
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |  |||| |||| |||  |||||||| |  ||||||||||||||| ||||||||||||||||  |||||     
T  38597128 gccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagggacctttttgatggacgtctgacaaatta 38597029  T
Q  567 aggga 571  Q
    |||||    
T  38597028 aggga 38597024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 559 - 640
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  559 taaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||||||||||| |||||||||||||| ||||||| ||  |  || |||||||||||||||||||| ||| ||||| ||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 32087697 - 32087578
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| ||||||||  || | |||| ||   ||||| ||||  |||||| |||||||| |||||||||||||||| ||||||     
T  32087697 gccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaaggctaacagagcacttggacggagggacctttttgatggacgtctgaaaaatta 32087598  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  32087597 agggactaagttgatatttc 32087578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 544 - 650
Target Start/End: Original strand, 42473625 - 42473731
Alignment:
Q  544 tttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagga 643  Q
    |||||||||||||||||||||||||||| ||  | ||||||||  | |||| ||  || || ||||| ||||||| ||||||||||||| |  ||||||     
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggt 42473724  T
Q  644 attagtc 650  Q
    |||||||    
T  42473725 attagtc 42473731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 21842992 - 21843081
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| |   ||||| ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 21843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 15459184 - 15459232
Alignment:
Q  521 gagcttttggacagagggaccattttgatggacgtctgtaaaattcagg 569  Q
    |||| |||||||  ||||||||||||||||||||||||| |||||||||    
T  15459184 gagcatttggacgaagggaccattttgatggacgtctgttaaattcagg 15459232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 586
Target Start/End: Original strand, 38178037 - 38178153
Alignment:
Q  470 acgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagg 569  Q
    ||||||||| ||||||||| |||||| || |||| |||| ||   ||||||||||   |||||  ||||||| ||||||||||||||||  ||||||||     
T  38178037 acgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcaga 38178136  T
Q  570 gattaaatagatatttc 586  Q
     | ||||| ||||||||    
T  38178137 tactaaattgatatttc 38178153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 586
Target Start/End: Original strand, 38205261 - 38205377
Alignment:
Q  470 acgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagg 569  Q
    ||||||||| ||||||||| |||||| || |||| |||| ||   ||||||||||   |||||  ||||||| ||||||||||||||||  ||||||||     
T  38205261 acgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaacggagcacatggacgaagggacctttttgatggacgtctgacaaattcaga 38205360  T
Q  570 gattaaatagatatttc 586  Q
     | ||||| ||||||||    
T  38205361 tactaaattgatatttc 38205377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 516 - 632
Target Start/End: Complemental strand, 40780684 - 40780568
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   |||||||||||| || |||||||||||| ||| | ||||||||  |||||| ||  || || ||| | ||||    
T  40780684 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 40780585  T
Q  616 tttgaaaattcaaggac 632  Q
    ||| |||||||||||||    
T  40780584 tttcaaaattcaaggac 40780568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 24496924 - 24496785
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||  ||||||| | |||||| || |||| |||| ||  | |||| || | ||||||| || |||||||||||||| ||||||   ||||||||    
T  24496924 cacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggaccattttgatgaacgtctcacaaattcag 24496825  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttg 608  Q
    ||||||| | |||||||| || |||| ||  |||||||||    
T  24496824 ggattaatttgatatttcacataattgagggacaaatttg 24496785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 650
Target Start/End: Original strand, 34328869 - 34328916
Alignment:
Q  603 aatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| | |||||||||||||||||||||||| |||||| |||||||    
T  34328869 aatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 34328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 586
Target Start/End: Original strand, 35292371 - 35292442
Alignment:
Q  515 ctaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttc 586  Q
    |||||||||| ||||||| |||| ||| |||| |||||||||||  ||||||||||| ||| | ||||||||    
T  35292371 ctaacggagcatttggacggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttc 35292442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 420
Target Start/End: Complemental strand, 22687319 - 22687217
Alignment:
Q  318 gccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtctt 417  Q
    ||||||||||||||||   | ||||||| ||  ||||| |||||||||||||||||| |||  | ||||||||   |||||||||||  |||||| ||||    
T  22687319 gccttctccttgtcactggcggatgcctgtttacgatccaggttgtgtttccgcttcagacttgtgtcgctgctcgtgttttgttgttaggtttcatctt 22687220  T
Q  418 cct 420  Q
    |||    
T  22687219 cct 22687217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 2852975 - 2852886
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||| | ||| | |||||||| ||||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtc 2852886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 7269446 - 7269535
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || || || ||||||| ||||||||| |||||| |||||| |||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 783 - 1052
Target Start/End: Original strand, 26449244 - 26449519
Alignment:
Q  783 acacttcacaccaatattctcctccactttccaatattcacccaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccactgccg 882  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||| |||    
T  26449244 acacttcacgccaatattctcctccactttccaatattcacccaccactacctaagtctctttccaatgcctccctccgtcgtctcatcttccactaccg 26449343  T
Q  883 aaggcacatctcctccctcctcttggcccaccatcgaagacaactccctgtcttcagcctaatttcttat----ttccttcctgtttaccacaattttct 978  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  26449344 aaggcacatctcctccctcctcttggcccaccaccgaagacaactccctgtcttcagcctaatttcttctttccttccttcctgtttaccacaattttct 26449443  T
Q  979 cactcacgtaag--ctctctctgtaccgctttctctctcccccataactctatcctccattgttgtatctttctct 1052  Q
    |||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26449444 cactcctgtaagccctctctctgtaccgctttctctctcccccataactctatcctccattgatgtatctttctct 26449519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 2767115 - 2766934
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2767115 cacgtgtacaggacaacacaacatacaagaggacacatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcag 2767016  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| |   || | |||| | ||||||| |||||||||||||||| |||||  |||||||    
T  2767015 ggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 469 - 647
Target Start/End: Complemental strand, 17696387 - 17696209
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||||||    
T  17696387 cacgtgtacaggacaacacaacatgcaagatgacacatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcag 17696288  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||  ||||||| ||  |  |||||||| |||||||||||||||||||||||| |||||| ||||    
T  17696287 ggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 17696209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 39664711 - 39664892
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39664711 cacgtgtacatgacaacacagctagcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 39664810  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||||||||||||||  ||||||  |  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  39664811 ggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 44709708 - 44709889
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  44709708 cacgtgtacaagacaacacaacatgcaagaggacatatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcag 44709807  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||||||| |||||| ||||||| ||   | |||||||| | ||||| |||||||||||||||| |||||| |||||||    
T  44709808 ggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 19908209 - 19908391
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  19908209 cacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaa 19908308  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctga-tttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| || ||||| |||||||||||||||| |||||| |||||||    
T  19908309 ggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 14389047 - 14389228
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||||||||||||||| | || |||||||||    
T  14389047 cacgtgtacaagacaacacaacatgcaagaggacacatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcag 14389146  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||||||||||||| |||||| |||||| |||||||    
T  14389147 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 40560404 - 40560223
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||| ||||| ||||||||| ||||||||||||||||||| |||||||||| || ||||||||| ||||||| |||||||||||||||||||||||||||    
T  40560404 cacgcgtacatgacaacacagcatgcaagaggacacatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcag 40560305  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||||||||||| ||||||||| |||||| |||| | |||||||    
T  40560304 ggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 16763256 - 16763076
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||| |||||||||||| |||||| ||| | |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  16763256 cacgtgtacaagacaaaacaacatgcaag-ggacacgtcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcag 16763158  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  16763157 ggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 469 - 585
Target Start/End: Original strand, 42519168 - 42519284
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42519168 cacgtgtacaggacaacacagcatgcaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcag 42519267  T
Q  569 ggattaaatagatattt 585  Q
    ||| |||||||||||||    
T  42519268 ggactaaatagatattt 42519284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 39455350 - 39455169
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||     
T  39455350 cacgtgtacatgacaacacaacatgcaagagggcacatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcat 39455251  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||  ||||||| || |   |||||  | ||||||| ||||||||||||| || |||||  |||||||    
T  39455250 ggactaaatagatattttgcaaaattcaggactgaatttaaccgattttttaaaattcaaggacaaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 469 - 628
Target Start/End: Complemental strand, 6797688 - 6797529
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||||||| |||||| ||||  |||| |||||||||||| |||| ||||||||||| ||||||||||||||| ||    
T  6797688 cacgtgtacaagacaacacatcatgcaagaggatacatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaag 6797589  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaa 628  Q
    ||| |||||||||||||| ||||||| || ||| ||||| ||  |||||| |||||||||    
T  6797588 ggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaa 6797529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 16377174 - 16377299
Alignment:
Q  483 aacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagata 582  Q
    |||||| |||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  16377174 aacacagcatgcaagagaacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagata 16377273  T
Q  583 tttctcaaaatttagaaacaaatttg 608  Q
    |||  ||||||| ||  |||||||||    
T  16377274 ttttgcaaaattcagggacaaatttg 16377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 469 - 635
Target Start/End: Complemental strand, 37645668 - 37645502
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||| ||||| ||||||||| || || |||| |||||| ||||| ||||||| ||||||||  || |||| ||||||||     
T  37645668 cacgtgtacaggacaacacagcatacaagatgacacatcatcatcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaa 37645569  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    ||| ||||||||||||||  ||||||||   || |||| | ||||||||| ||||||||||||||||    
T  37645568 ggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaaggacgaa 37645502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 31475079 - 31475166
Alignment:
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||||||||||||||||||||||||||||||||| |  || |||||| |||||||||||||||| ||| ||||| |||||| ||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 278 - 435
Target Start/End: Original strand, 27739085 - 27739242
Alignment:
Q  278 tcgctttttggtttagttgatatttacttcggcgacgacagccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgcttcgga 377  Q
    |||||||||||||| |||||| ||||||  |||||| |  ||||||| |||||||| |   |   |||||| |||||||  |||||||||||||||| |     
T  27739085 tcgctttttggtttggttgatgtttactctggcgacaaacgccttcttcttgtcactagtggccaccttttttcgatctgcgttgtgtttccgcttcagg 27739184  T
Q  378 ccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatttgtgattt 435  Q
     |  ||||||||||| ||||||||||| ||||||| ||||||||| ||||||||||||    
T  27739185 gcgacgtcgctgcctgtgttttgttgtttggtttcatcttcctcttgatttgtgattt 27739242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 544 - 650
Target Start/End: Complemental strand, 19581520 - 19581414
Alignment:
Q  544 tttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagga 643  Q
    |||||||||| | ||  ||||||  ||| |||||||||||||| ||||||| ||  ||||||||||||||||||| |||||| ||||||||| ||||||     
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  644 attagtc 650  Q
    |||||||    
T  19581420 attagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 31903035 - 31902961
Alignment:
Q  352 gatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagat 426  Q
    |||||||||||||||||||||||  ||| |||||||||||  |||||||||||  ||||||||||||||||||||    
T  31903035 gatctaggttgtgtttccgcttcaaaccggcgtcgctgcccgtgttttgttgttgggtttcgtcttcctctagat 31902961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 500 - 650
Target Start/End: Complemental strand, 37020658 - 37020508
Alignment:
Q  500 gacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaa 599  Q
    ||||||||| ||| | |||||||  |||||||| |||||||   ||||||||||||||| |||||||||||| ||| | ||||||||  |||||| |       
T  37020658 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaagg 37020559  T
Q  600 acaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| ||| | ||||||| ||||||||||||| |  |||||| |||||||    
T  37020558 acaaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 525 - 650
Target Start/End: Original strand, 6786000 - 6786125
Alignment:
Q  525 ttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaat 624  Q
    |||||||| |||||||   |||||||||||||||||||||||||||| ||| | ||||||||  | |||| ||  || || ||||| ||||||| |||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  625 tcaaggacgaaattgaggaattagtc 650  Q
    |||||||| |  |||||| |||||||    
T  6786100 tcaaggactattttgaggtattagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 29486399 - 29486463
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctct 422  Q
    ||||||||||||||||| |||| ||||||||||| | |||||||||| ||||||||||| |||||    
T  29486399 ggttgtgtttccgcttcagaccggcgtcgctgcccaagttttgttgtttggtttcgtctccctct 29486463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 29909601 - 29909720
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| |||||||||||||||||   |||| |||| ||   ||||| ||||  |||||| |||||||| ||||||||||||||||  |||||     
T  29909601 gccacgcgtacaagacaacacaacatgcaacgcgacagatcaacatggctaacagagcacttggacggagggacctttttgatggacgtctgacaaatta 29909700  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||||| ||||||||    
T  29909701 agggactaaattgatatttc 29909720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 467 - 613
Target Start/End: Original strand, 39338 - 39484
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| ||||||||| |||| |||| ||   |||||||| |  |||||| | |||||| |||||||| |||||||  ||||||    
T  39338 gccacgcgtacaagacaacacagcatgcaagacgacatatcagcatggctaacggaacacttggacggggggacctttttgatgaacgtctgacaaattc 39437  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctga 613  Q
    ||||| ||| | |||||||| || |||| ||  ||||| ||||||||    
T  39438 agggactaagttgatatttcgcataattgaggtacaaagttggctga 39484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 525 - 631
Target Start/End: Original strand, 24208061 - 24208167
Alignment:
Q  525 ttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaat 624  Q
    |||||||| |||||||   |||||||||||||||||||||||||||| ||| | ||||||||  | |||| ||  || || ||||| ||||||| |||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  625 tcaagga 631  Q
    |||||||    
T  24208161 tcaagga 24208167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 467 - 635
Target Start/End: Complemental strand, 37417456 - 37417288
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |   ||| |||| ||   ||||||||||  ||||||  ||||||| ||||||||||||||||  ||||||    
T  37417456 gccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattc 37417357  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    ||||| ||| | |||||||| || |||| ||  |  |||||||| ||    ||||||||||||||||||    
T  37417356 agggactaagttgatatttcgcataattgagggatgaatttggccgacccatgaaaattcaaggacgaa 37417288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 513 - 640
Target Start/End: Complemental strand, 7744180 - 7744053
Alignment:
Q  513 cactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctg 612  Q
    |||||||||| ||||||||  |||||||||||||||||||| |  |  |||||||||||  |||| |||||||| |||||||| || || | |||| ||     
T  7744180 cactaacggaccttttggatggagggaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaattttgagacgattttgccta 7744081  T
Q  613 atttttgaaaattcaaggacgaaattga 640  Q
    ||  ||| ||||||| ||||||| ||||    
T  7744080 atgcttgcaaattcagggacgaagttga 7744053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 585
Target Start/End: Complemental strand, 15372615 - 15372564
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatattt 585  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||||||    
T  15372615 gagggacctttttgatggacgtctgataaattcagggattaaattgatattt 15372564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 513 - 596
Target Start/End: Complemental strand, 17946231 - 17946148
Alignment:
Q  513 cactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaattta 596  Q
    |||||||||| ||||||||| |||||||||||||||||||| |  |  |||||||||||  |||| |||||||  |||||||||    
T  17946231 cactaacggaccttttggacggagggaccattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaattta 17946148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 701 - 756
Target Start/End: Original strand, 26449186 - 26449241
Alignment:
Q  701 aatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaat 756  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||  ||||||||||    
T  26449186 aatctaagttgatctccacacaattcatctgttcccaataaacattttctttcaat 26449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 62763 - 62865
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| | |||||  ||||||| || ||||  ||| || ||||| |||||| ||||||| || |||| |||||||||||||| ||| ||||||||    
T  62763 cacgtgtacaaggcaacatgacatgcatgacgacaactcagcagcactagcggagcatttggacggaaggactattttgatggacgtttgttaaattcag 62862  T
Q  569 gga 571  Q
    |||    
T  62863 gga 62865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 40561878 - 40561968
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||||| ||| | | |||||| ||||||| ||| || || ||||| ||||||| ||||||||| |||||| |||||| ||||||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtcg 40561968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 567
Target Start/End: Complemental strand, 42879536 - 42879438
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattca 567  Q
    |||||||||| ||||||||| |||||| |  |||| |||| ||  ||||||||| |  |||||| |||||||| ||||||||||||||||  |||||||    
T  42879536 cacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttgatggacgtctgacaaattca 42879438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 2062251 - 2062304
Alignment:
Q  351 cgatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgt 404  Q
    |||||| ||||||||||||||||| |||| |||||||||||  |||||||||||    
T  2062251 cgatctgggttgtgtttccgcttcagaccggcgtcgctgcccgtgttttgttgt 2062304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 14387438 - 14387349
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | ||||||||  |||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 14387349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||||| ||||||  |||||| ||  || |||||| | ||||||| ||||||||| |||||| |||||| |||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||| | |||||||||||||||| |||||| |||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 34400403 - 34400314
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| |||  |||||| |||||| ||||||| ||  |  |||||||| |||||||||||||||||||| ||| |||||| |||||||    
T  34400403 aaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 39663243 - 39663154
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||||| |||||  ||||||| ||  || |||||| | ||||||| |||||||||||||||| || ||| |||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 568 - 652
Target Start/End: Complemental strand, 19906764 - 19906680
Alignment:
Q  568 gggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    |||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| || ||| |||| ||||    
T  19906764 gggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtattaatcgt 19906680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 526 - 569
Target Start/End: Original strand, 11315335 - 11315378
Alignment:
Q  526 tttggacagagggaccattttgatggacgtctgtaaaattcagg 569  Q
    ||||||| |||||||||||||||||||||||||  |||||||||    
T  11315335 tttggacggagggaccattttgatggacgtctgacaaattcagg 11315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 635
Target Start/End: Original strand, 37646477 - 37646552
Alignment:
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    |||||||||||| |||||||||||||| || |||||    || |||||| ||||||||||||| |||||| |||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaa 37646552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 15807862 - 15807964
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| |||||||||||| || ||||||| || |||| | |||||| ||||| ||| ||||||||    
T  15807862 cacgtgtacaagacaacaagtcatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcag 15807961  T
Q  569 gga 571  Q
    |||    
T  15807962 gga 15807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 32608010 - 32608112
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| |||||||||||| || ||||||| || |||| | |||||| ||||| ||| ||||||||    
T  32608010 cacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcag 32608109  T
Q  569 gga 571  Q
    |||    
T  32608110 gga 32608112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 2e-67; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 26242277 - 26242455
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26242277 cacgtgtacaagacaacacaacatgcaagaggacacatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 26242376  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     || |||||||||||||| ||||||||||  || ||||||||||||||||||||||||||| |||||||||||| ||||    
T  26242377 agactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 460 - 650
Target Start/End: Complemental strand, 13282667 - 13282478
Alignment:
Q  460 gtaggcagccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgt 559  Q
    ||||| ||||||||||||| ||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  13282667 gtaggtagccacgtgtacaagacaacagagcatgcaag-ggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgt 13282569  T
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  13282568 aaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 7745075 - 7745256
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| |||    
T  7745075 cacgtgtacaagacaacacatcatgcaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacag 7745174  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||| ||||||| ||||||| ||| || |||||||||||||||||||||||||| |||||| |||||  |||||||    
T  7745175 ggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttgagatattagtc 7745256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 477 - 651
Target Start/End: Original strand, 41042555 - 41042729
Alignment:
Q  477 caggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaa 576  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  41042555 caggacaacacagcatgcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaa 41042654  T
Q  577 tagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    |||||||||| ||||||| ||  |||||||||||  |||||| |||||||||||||| | || ||| ||||||||    
T  41042655 tagatatttcacaaaattcagggacaaatttggccaattttttaaaattcaaggacggatttaaggtattagtcg 41042729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 469 - 647
Target Start/End: Complemental strand, 42941955 - 42941777
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||  ||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||    
T  42941955 cacgtgtacctgacaacacaacatgcaagaggacacatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcag 42941856  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||| ||||||||||||||| ||  || |||||||||||||||| |||||||||||||||| |||||| ||||    
T  42941855 ggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 8609751 - 8609931
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8609751 cacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 8609849  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||| ||||| |||||| |||||||    
T  8609850 ggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 13486062 - 13486243
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13486062 cacgtgtacagggcaacacaacatgcaagaggacacatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 13486161  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||  ||| || ||| || | ||||||| |||||||||| || || |||||| |||||||    
T  13486162 ggactaaatagatatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcacaaatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 469 - 635
Target Start/End: Original strand, 9673128 - 9673294
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  9673128 cacgtgtacatgacaacacaacatgcaagaagacacatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcag 9673227  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    |||||||||||||||||| ||||||| ||  || ||||| ||| |||  |||| |||||||||||||    
T  9673228 ggattaaatagatatttcacaaaattcagggacgaatttagctaattgatgaagattcaaggacgaa 9673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 472 - 647
Target Start/End: Original strand, 41825610 - 41825785
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    ||||||||||||||||| ||||||||| ||||||||| ||| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41825610 gtgtacaggacaacacagcatgcaagaagacacatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcaggga 41825709  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     |||||||||||||| ||||||| |   || |||||   ||||||||||||||||||||||||| |||||| ||||    
T  41825710 ctaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 654
Target Start/End: Original strand, 13108300 - 13108484
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  13108300 cacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcag 13108398  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgtat 654  Q
    ||| ||| | |||||||| ||||||| ||  ||  |||| || ||||||| |||||||||||||||| |||||  |||||||||||    
T  13108399 ggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttgagttattagtcgtat 13108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 38547408 - 38547228
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  38547408 cacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcag 38547310  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| |   ||  ||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  38547309 ggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 473 - 650
Target Start/End: Complemental strand, 22272513 - 22272334
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||     
T  22272513 tgtacatgacaacacaacatgcaagagaacacatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 22272414  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctga--tttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||| | ||||||| ||  || |||||| ||||  ||||| ||||||||| |||||| |||||| |||||||    
T  22272413 taaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaatttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 469 - 649
Target Start/End: Complemental strand, 5036630 - 5036446
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttt----tggacagagggaccattttgatggacgtctgtaaaat 564  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||    ||||| ||| |||||||||||| ||||||||||||||    
T  5036630 cacgtgtacaagacaacacaacatgcaagaggacacatcatcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaat 5036531  T
Q  565 tcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||| ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||| ||||||||| |||||| ||||||    
T  5036530 tcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 27691335 - 27691154
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||| | ||||||||| | ||||||| ||| | | ||||| ||||||||| |||||||   |||||||||||||||||||||||||    
T  27691335 cacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattgacggaccttttggacggagggacggatttgatggacgtctgtaaaattcag 27691236  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  27691235 ggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 472 - 629
Target Start/End: Original strand, 40339646 - 40339801
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    ||||||| ||||||||||||||||| |||| |||||| ||| ||||||||||||||||||   ||||||||||||||||||| ||||||||||||| |||    
T  40339646 gtgtacatgacaacacaacatgcaaaaggatacatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatgga 40339745  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaag 629  Q
     |||||||||||||| || |||| ||||| |||||| || || |||||||||||||||    
T  40339746 ctaaatagatatttcacataattcagaaa-aaatttagccga-ttttgaaaattcaag 40339801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 573 - 653
Target Start/End: Complemental strand, 26238803 - 26238723
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgta 653  Q
    |||||||||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  26238803 taaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcgta 26238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 42943426 - 42943517
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcgt 42943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 22273891 - 22273980
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| |||||||||||||  ||||||| ||| ||||||||||| ||||||| ||||||||||||| || |||||| |||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 471 - 650
Target Start/End: Original strand, 33708769 - 33708947
Alignment:
Q  471 cgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggg 570  Q
    ||||| || ||||||| | ||||||||| | ||||||| ||| | ||||||| ||||||||| |||||||   |||||||||||| ||||||||||||||    
T  33708769 cgtgtgcatgacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcaggg 33708868  T
Q  571 attaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    | ||| |  ||||||| ||||||| ||  || || ||| | | ||||| |||||||||||| ||| |||||| |||||||    
T  33708869 actaatttaatatttcgcaaaattcagggacgaaattgaccg-ttttttaaaattcaaggatgaatttgaggtattagtc 33708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 573 - 650
Target Start/End: Original strand, 34681078 - 34681155
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||| ||  || |||||||| |||||||||||||||||||||||| |||||| |||||||    
T  34681078 taaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 718 - 814
Target Start/End: Original strand, 26955544 - 26955649
Alignment:
Q  718 acacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac-------tacacttcacacca--atattctcctcca 808  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||| |||| ||||||||||       ||| ||||||||||  |||||||||||||    
T  26955544 acacaatccatctatttccaataaacattttctttcaattttaagtcataagtgcattggtaacatacgcatacgcttcacaccaatatattctcctcca 26955643  T
Q  809 ctttcc 814  Q
    ||||||    
T  26955644 ctttcc 26955649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 33750325 - 33750444
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||||||||||||| |||| |||| || | ||||| ||||  |||||| |||||||| |||||||| | |||||  ||||||    
T  33750325 gccacgcgtacaagacaacacaacatgcaagacgacagatcaacatcgctaacagagcacttggacggagggacctttttgatgaatgtctgacaaattc 33750424  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  33750425 agggactaagttgatatttc 33750444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 404
Target Start/End: Complemental strand, 37987661 - 37987530
Alignment:
Q  273 tcttgtcgctttttggtttagttgatatttacttcggcgacgacagccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgct 372  Q
    ||||||||||| ||||||| |||| | |||||||||| | ||  ||||||||||||||||||  | | ||| | ||  |||||||||||| |||||||||    
T  37987661 tcttgtcgcttgttggtttggttgttgtttacttcggtgccggaagccttctccttgtcaccggcgggtgcgtgtttacgatctaggttgagtttccgct 37987562  T
Q  373 tcggaccagcgtcgctgcctatgttttgttgt 404  Q
    || |||| |||||||||||  |||| ||||||    
T  37987561 tcagaccggcgtcgctgcccgtgttatgttgt 37987530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 707 - 781
Target Start/End: Complemental strand, 30850167 - 30850093
Alignment:
Q  707 tgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    ||||||||| ||||||||| || |||| |||||||||||  |||||||||||||| |||||||| ||||||||||    
T  30850167 tgttgatctacacacaatctatttgttcccaataaacactatctttcaattttaaatcacaagtgcattggtaac 30850093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 561 - 655
Target Start/End: Original strand, 38548831 - 38548925
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgtata 655  Q
    ||||||||||||||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||| ||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatata 38548925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 358 - 431
Target Start/End: Original strand, 9519057 - 9519130
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatttgtg 431  Q
    ||||||||| |||||||  |||||||||||||||  |||||||||||  ||||||||||| |||||||||||||    
T  9519057 ggttgtgttcccgcttcaaaccagcgtcgctgcccgtgttttgttgttgggtttcgtctttctctagatttgtg 9519130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 573 - 650
Target Start/End: Original strand, 43262149 - 43262226
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||||||   | ||||| ||||||||||||||||| ||||||||| |||||| |||||||    
T  43262149 taaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 467 - 583
Target Start/End: Original strand, 38882738 - 38882854
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| |||||| || |||| |||| ||   ||||||||||  |||||| |||||||  |||| |||||||||||  ||||||    
T  38882738 gccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaacggagcacttggacggagggacattttttatggacgtctgacaaattc 38882837  T
Q  567 agggattaaatagatat 583  Q
    ||||||||||| |||||    
T  38882838 agggattaaattgatat 38882854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 473 - 640
Target Start/End: Complemental strand, 9184560 - 9184393
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||| ||||||||| |||||| |  |||| |||| || |||||| | ||| ||||||| |||||||||||| ||| ||||||||  |||||||||||     
T  9184560 tgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatttcgatcgacgtctgacaaattcagggac 9184461  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||| | |||||||| |  | ||  |  || |||||||| ||||  || ||||||||||||||||||||    
T  9184460 taatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattga 9184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 37525964 - 37526083
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||| | ||||||||||||| || || |||| |||| ||  |||||| | ||  |||||| |||||||| |||||||||| ||||| |||||||    
T  37525964 gccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaacagcgcacttggacggagggacctttttgatggatgtctgaaaaattc 37526063  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  37526064 agggactaagttgatatttc 37526083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 42897715 - 42897834
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| || |||| |||| ||   ||||| ||||  |||||| |||||||| ||||||||||||||||  ||||||    
T  42897715 gccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattc 42897814  T
Q  567 agggattaaatagatatttc 586  Q
    | ||| ||| | ||||||||    
T  42897815 aaggactaagttgatatttc 42897834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 469 - 566
Target Start/End: Complemental strand, 11788502 - 11788405
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    ||||||||||  |||||||||||| ||||| ||||| ||| || ||||||| ||| | |||||| ||||||  | |||||||||||||||| ||||||    
T  11788502 cacgtgtacaaaacaacacaacatacaagaagacacctcagcatcactaacagagatattggacggagggatgaatttgatggacgtctgttaaattc 11788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 29239187 - 29239276
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | ||||||||  |||||||||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 29239276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 33761158 - 33761069
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||||||||||| ||||||||| |||||| |||||| |||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 516 - 632
Target Start/End: Complemental strand, 15305931 - 15305815
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   |||||||||||||||||||||||||||| ||| | ||||||||  | |||| ||  ||||| ||| |  |||    
T  15305931 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15305832  T
Q  616 tttgaaaattcaaggac 632  Q
    ||| |||||||||||||    
T  15305831 tttcaaaattcaaggac 15305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 516 - 632
Target Start/End: Complemental strand, 15486300 - 15486184
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   |||||||||||||||||||||||||||| ||| | ||||||||  | |||| ||  ||||| ||| |  |||    
T  15486300 taacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatt 15486201  T
Q  616 tttgaaaattcaaggac 632  Q
    ||| |||||||||||||    
T  15486200 tttcaaaattcaaggac 15486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 561 - 653
Target Start/End: Original strand, 27692837 - 27692929
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgta 653  Q
    ||||||||||| ||| | |||||||  ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcgta 27692929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 586
Target Start/End: Original strand, 31201151 - 31201203
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttc 586  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| ||||||||    
T  31201151 gagggacctttttgatggacgtctgataaattcagggattaaattgatatttc 31201203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 601704 - 601793
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | ||||||||  |||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 601793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||||| |||||| ||||||| |  ||| |||||| | ||||||| ||||||||| |||||| |||||| |||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaa-gacgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 515 - 608
Target Start/End: Complemental strand, 8654634 - 8654542
Alignment:
Q  515 ctaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttg 608  Q
    ||||||||||  |||||| |||||||| ||||||||||||||||  ||||||| | ||||||| |||||||| || |||| || ||| ||||||    
T  8654634 ctaacggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaaat-gatatttcgcataattgaggaacgaatttg 8654542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 33762713 - 33762802
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | ||||||||  |||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 41823967 - 41823890
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||| |   || || || ||||||||||||||||||||||||||| || ||| |||||||    
T  41823967 taaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtc 41823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 606 - 650
Target Start/End: Complemental strand, 600804 - 600760
Alignment:
Q  606 ttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||    
T  600804 ttggctgatttttcaaaattcaaggacgaatttgaggtattagtc 600760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 582 - 650
Target Start/End: Complemental strand, 13484613 - 13484545
Alignment:
Q  582 atttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| ||||||| ||  || |||||||| ||||||||||||||||| |||||| |||||| |||||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtc 13484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 701 - 740
Target Start/End: Original strand, 26955505 - 26955544
Alignment:
Q  701 aatctatgttgatctccacacaatccatctgtttccaata 740  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  26955505 aatctatgttgatctctacacaatccatctatttccaata 26955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 586
Target Start/End: Complemental strand, 31821593 - 31821482
Alignment:
Q  475 tacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggatta 574  Q
    |||| ||||||||| ||||||||| |||| |||| ||   ||||| |||   |||||| |||||||| ||||||||||||||||  |||||| |||| ||    
T  31821593 tacaagacaacacatcatgcaagacgacagatcagcaaggctaacagaggacttggacggagggacctttttgatggacgtctgataaattctgggacta 31821494  T
Q  575 aatagatatttc 586  Q
    | | ||||||||    
T  31821493 agttgatatttc 31821482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 567
Target Start/End: Original strand, 11722752 - 11722850
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattca 567  Q
    ||||||||||  |||||||||||||||||| |||| |||| || || ||| ||||| | ||||| ||||||  | |||||| ||||| ||| |||||||    
T  11722752 cacgtgtacaacacaacacaacatgcaagacgacatatcagcatcagtaatggagcatctggacggagggatgaatttgattgacgtttgttaaattca 11722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 635
Target Start/End: Original strand, 13283995 - 13284069
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    ||||||| ||| ||| | |||||||| ||||||| ||  ||||| ||||| ||||||| ||||||||||||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaa 13284069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 34866702 - 34866632
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagattt 428  Q
    ||||||| |||||||||  ||| |||||||||||  |||||||||||  | ||||||||||||||| ||||    
T  34866702 ggttgtggttccgcttcaaaccggcgtcgctgcccgtgttttgttgttggatttcgtcttcctctaaattt 34866632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 35510819 - 35510909
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||||| ||| | |||||||| ||||||| |   || || ||| | ||||||| |||||||||||||||| |||||| ||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcg 35510909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 37801647 - 37801545
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| ||||||||||| | | ||||||| || |||||| |||||| ||||| ||| ||||||||    
T  37801647 cacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacgaaccatttggacggaaggaccaatttgattgacgtttgttaaattcag 37801548  T
Q  569 gga 571  Q
    |||    
T  37801547 gga 37801545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 539 - 640
Target Start/End: Complemental strand, 5075479 - 5075378
Alignment:
Q  539 accattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaatt 638  Q
    |||||||||||||||||  |  ||||||| |||  |||| |||||||| |||||||| |  || | ||||||||||  ||| ||||||||||||||| ||    
T  5075479 accattttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggacgaagtt 5075380  T
Q  639 ga 640  Q
    ||    
T  5075379 ga 5075378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 10551748 - 10551829
Alignment:
Q  362 gtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatttgtgattttgttgctg 443  Q
    |||||||||||||  | | |||||||||||  || ||||||||  |||||||||||||||||||| | || || ||||||||    
T  10551748 gtgtttccgcttcaaatcggcgtcgctgcccgtgctttgttgttgggtttcgtcttcctctagatctatgtttgtgttgctg 10551829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  |  || ||||| ||||||| |||||||||||||||| || ||| |||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | ||||||||  |||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| ||||||||||||| || |||||| |||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 5e-62; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 51684791 - 51684610
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  51684791 cacgtgtacaggacaacacaacacgcaagaggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaa 51684692  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||  ||||||| ||  |  ||||||||||||||||||||||||||||||||| |||||  |||||||    
T  51684691 ggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 27899044 - 27899225
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  27899044 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcag 27899143  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| |   || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  27899144 ggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 53190723 - 53190903
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53190723 cacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 53190821  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  53190822 ggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 21348904 - 21348723
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  21348904 cacgtgtacatgacaacacaacatgcaagaggacacattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcag 21348805  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| |   || |||||||| ||||||| ||||||||||||| || |||||| |||||||    
T  21348804 ggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 469 - 648
Target Start/End: Complemental strand, 43765318 - 43765139
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43765318 cacgtgtacatgacaacacaacatgtaagaggacacatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcag 43765219  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattag 648  Q
      | |||||||||||||| |||||||  | ||| |||||| | |||||||||||||||||||||||| |||||| |||||    
T  43765218 aaactaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 700 - 877
Target Start/End: Complemental strand, 44712522 - 44712346
Alignment:
Q  700 gaatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac-tacacttcacaccaata 798  Q
    ||||| ||||||||||||||||||||||||| ||  ||||||| |  || ||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  44712522 gaatccatgttgatctccacacaatccatcttttctcaataaatatttt-tttcaattttaagtcacaagtgcattggtaacgtacacttcacaccaata 44712424  T
Q  799 ttctcctccactttccaatattcacccaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccac 877  Q
    ||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  44712423 ttctcttccactttccaatattcacccagcacta-caaactctctctccattgcctccctccgtcgtctcatcttccac 44712346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 472 - 650
Target Start/End: Original strand, 30599884 - 30600062
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  30599884 gtgtacaagacaacacagcatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcaggga 30599983  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     |||||||||||||| ||||||| ||  ||||||||||| ||||| | |||||| ||||||||| |||||| |||||||    
T  30599984 ctaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 469 - 647
Target Start/End: Complemental strand, 42279688 - 42279510
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | ||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  42279688 cacgtgtataagacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcag 42279589  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||  |||||||  || || ||||  |||||||||||||||||||| |||||| |||||| ||||    
T  42279588 ggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 46112668 - 46112487
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||  |||||||| || ||||||||||||||||||||||||||||||||||     
T  46112668 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcat 46112569  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||  ||||||| |  ||| |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  46112568 ggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 469 - 653
Target Start/End: Original strand, 23293133 - 23293317
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||     
T  23293133 cacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcat 23293232  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgta 653  Q
    ||| |||||||||||||| ||||||| |    | ||||||||||||||||  ||||||||| || || |||||| ||||||||||    
T  23293233 ggactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaacaaatttgaggtattagtcgta 23293317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 472 - 650
Target Start/End: Complemental strand, 17515488 - 17515310
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    ||||||| ||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  17515488 gtgtacaagacaacacaacatgcaaaaggacacatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcaggga 17515389  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     |||||||||||||| ||||||| ||  |  ||||||||  |||||| |||||||||||| ||| |||||| |||||||    
T  17515388 ctaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttgaggtattagtc 17515310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 469 - 652
Target Start/End: Original strand, 2226116 - 2226298
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| |||||||||| ||| |||||||| |||||| |||||||||| |||||||||||||||||    
T  2226116 cacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcag 2226214  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||||    
T  2226215 ggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcgt 2226298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 54898617 - 54898437
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||| ||||||||||| |||||| ||| |  |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  54898617 cacgtgtacaagacaacgcaacatgcaag-ggacacgtcatcgtcactaacggagcttttggacggagagaccattttgatgaacgtctgtaaaattcag 54898519  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  54898518 ggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 469 - 652
Target Start/End: Complemental strand, 41977930 - 41977748
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||| |||||| ||| ||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  41977930 cacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccattaacgaagcttttggacggagggaccattttgacggacgtctgtaaaattcag 41977832  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||| ||| | |||||||| | ||||| ||  ||  ||||||| ||||||| |||||||||||||||| |||||| |||||||||    
T  41977831 ggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtcgt 41977748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 469 - 631
Target Start/End: Original strand, 35905676 - 35905837
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||| || |||||||| |||||| ||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  35905676 cacgtgtacaagacaacccatcatgcaag-ggacacgtcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcag 35905774  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaagga 631  Q
    ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| ||||||||||||    
T  35905775 ggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 35905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 469 - 586
Target Start/End: Original strand, 48830769 - 48830886
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||     
T  48830769 cacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaa 48830868  T
Q  569 ggattaaatagatatttc 586  Q
     || ||||||||||||||    
T  48830869 agactaaatagatatttc 48830886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 469 - 647
Target Start/End: Complemental strand, 2377210 - 2377032
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  2377210 cacgtgtacatgacaacacatcatgcaagaggacacgtcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcag 2377111  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     || |||||| || |||  ||||||| ||  || |||||||   ||||||||||||||||  ||||| |||||| ||||    
T  2377110 agactaaatatattttttgcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 469 - 576
Target Start/End: Original strand, 44276159 - 44276266
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||| |||||||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||     
T  44276159 cacgtgtacatgacgacacaacatgtaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaa 44276258  T
Q  569 ggattaaa 576  Q
    ||| ||||    
T  44276259 ggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 46197889 - 46197762
Alignment:
Q  481 acaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaataga 580  Q
    ||||||||||||||||||||| |||||| || |||||||||| |||||||||  |||||||||||| |||||||||||||||||||||| | ||||||||    
T  46197889 acaacacaacatgcaagaggaaacatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaataga 46197790  T
Q  581 tatttctcaaaatttagaaacaaatttg 608  Q
    |||||  ||||||| ||| || ||||||    
T  46197789 tattttgcaaaattcagagacgaatttg 46197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 7884837 - 7884938
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||| |||||  ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  7884837 cacgtgtacaagacaacacaacatgcaag-ggacatgtcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcag 7884935  T
Q  569 gga 571  Q
    |||    
T  7884936 gga 7884938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 469 - 554
Target Start/End: Complemental strand, 600890 - 600805
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacg 554  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  600890 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttagacggagggaccattttgatggacg 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 44794388 - 44794208
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||| | ||||||||| | ||||||| ||| | ||||||| ||||||||| ||||||| | |||||||||| |||| |||||||||    
T  44794388 cacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcag 44794289  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  |  || ||||| || |||| |||||||||||||||| |||||| |||||||    
T  44794288 ggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 469 - 652
Target Start/End: Original strand, 3152181 - 3152364
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||| | |||| |||| | ||||||| ||| | ||||||| ||||||||| |||||||   |||||||||||||||||||||||||    
T  3152181 cacgtgtacatgacaacaaagcatgtaagaagccacatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcag 3152280  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||| ||| | |||||||| ||||||| ||  |  || ||||| ||||||| |||||| |||||  || |||||| |||||||||    
T  3152281 ggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaatttaaggataaatttgaggtattagtcgt 3152364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 469 - 642
Target Start/End: Complemental strand, 2660393 - 2660220
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| ||||||||| | ||||||||| | ||||||| |   | |||| || ||||||||| ||||||| | ||||||||||||||||||||||||     
T  2660393 cacgtgtagaggacaacaaagcatgcaagaagccacatcatcgttattaacagaccttttggacggagggacgaatttgatggacgtctgtaaaattcaa 2660294  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||| ||| | |||||||| ||||||| ||  || || ||||  ||||||| |||||||||||||||| ||||||    
T  2660293 ggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttgagg 2660220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||||| ||| |||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||||||||| |||||| ||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 640
Target Start/End: Original strand, 40508854 - 40509025
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||| |  |||| |||| ||| ||||||||| |  |||||| |||||||  ||||||||||||||||  |||||||     
T  40508854 cacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaa 40508953  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||||| | |||||||| || |||| ||  || |||||||| ||    |||||||||||||||||| ||||    
T  40508954 ggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttga 40509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 48829433 - 48829356
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||| || || |||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  48829433 taaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 33852611 - 33852730
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    ||||||| |||| |||||||||||||||| |  ||||  ||||||   ||||||||||  ||||||||||||||| ||||||||||||||||  ||||||    
T  33852611 gccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaacggagcacttggacagagggacctttttgatggacgtctgataaattc 33852710  T
Q  567 agggattaaatagatatttc 586  Q
    ||  ||||||| ||||||||    
T  33852711 agaaattaaattgatatttc 33852730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 573 - 652
Target Start/End: Original strand, 51686406 - 51686485
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    |||||| ||||||| ||||||||||  || ||||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  51686406 taaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtcgt 51686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 484 - 594
Target Start/End: Original strand, 19987572 - 19987682
Alignment:
Q  484 acacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatat 583  Q
    ||||| ||||||||| | ||||||| ||| |||||| || ||||||||| |||||||   |||||||||||| ||||||||| ||||| ||| | |||||    
T  19987572 acacagcatgcaagaagccacatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatat 19987671  T
Q  584 ttctcaaaatt 594  Q
    ||| |||||||    
T  19987672 ttcgcaaaatt 19987682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 611222 - 611311
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||  ||||||| ||||||  |||||| ||  || |||||||||||||||| |||||||||||||||| |||||| |||||||    
T  611222 aaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 611311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 23291659 - 23291570
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||| || |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| || ||| |||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtc 23291570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 467 - 640
Target Start/End: Complemental strand, 23774334 - 23774162
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |  |||| |||| ||   ||||| ||||  || ||| |||||||  ||||||||||||||||  ||||||    
T  23774334 gccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaacagagcacttagac-gagggacttttttgatggacgtctgacaaattc 23774236  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||| ||||| |||||||| || |||| ||  || |||||||| || |  |||||||||||||||||| ||||    
T  23774235 agggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 30598426 - 30598337
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| |||  |||||| |||||| ||||||| ||  ||||||||| | |||||||||||||||||||||||| |||||| |||||||    
T  30598426 aaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 44268070 - 44267981
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| |||  |||||| |||||| ||||||| ||| |  |||||||| |||||||||||||||||||||||| |||||| |||||||    
T  44268070 aaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 700 - 781
Target Start/End: Original strand, 51646976 - 51647057
Alignment:
Q  700 gaatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    |||||| | |||||||||||||||||||| |||| |||||||||||  ||||||||||| |  |||||| ||||||||||||    
T  51646976 gaatctgtattgatctccacacaatccatttgttcccaataaacactgtctttcaatttcatctcacaacttcattggtaac 51647057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 709 - 781
Target Start/End: Complemental strand, 8507194 - 8507122
Alignment:
Q  709 ttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    |||||||||||| ||||||| |||| |||||||||||  ||||||||||| || |||||| ||||||||||||    
T  8507194 ttgatctccacataatccatttgttcccaataaacactgtctttcaatttcaactcacaacttcattggtaac 8507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 469 - 572
Target Start/End: Complemental strand, 5125982 - 5125879
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||  ||||||| || ||||  ||| || |||||||||||| ||||||| || |||| |||||||||||||| ||| |||||||     
T  5125982 cacgtgtacaagacaacaggacatgcaggacgacaactcagcagcactaacggagcatttggaccgaaggactattttgatggacgtttgttaaattcaa 5125883  T
Q  569 ggat 572  Q
    ||||    
T  5125882 ggat 5125879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 31887393 - 31887512
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| ||||||||  |||| |||| ||   ||||||||||  |||||| |||||||| ||||||| ||| ||||  ||||||    
T  31887393 gccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcacttggacggagggacctttttgatagacatctgacaaattc 31887492  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  31887493 agggactaagttgatatttc 31887512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 469 - 567
Target Start/End: Complemental strand, 5133177 - 5133079
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattca 567  Q
    |||||||||| |||||||  ||||||| || ||||  ||| || |||||||||||| ||||||| || |||| |||||||||||||| ||| |||||||    
T  5133177 cacgtgtacaagacaacaggacatgcatgacgacagctcagcagcactaacggagcatttggacggaaggactattttgatggacgtttgttaaattca 5133079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 7883417 - 7883327
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||| | ||| | |||||||| ||||||||||  || || ||||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtcg 7883327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 46308896 - 46308806
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcg 46308806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 38193510 - 38193599
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38193599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 41979352 - 41979441
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 44795890 - 44795981
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||| ||| ||| | |||||||| ||||||| || ||| || || || ||||||| |||||||||||||||| |||||| |||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtcgt 44795981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 515 - 586
Target Start/End: Complemental strand, 48634012 - 48633941
Alignment:
Q  515 ctaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttc 586  Q
    ||||||||||  |||||| |||||||| ||||||||||||||||  ||||||||||| ||| | ||||||||    
T  48634012 ctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttc 48633941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 54900074 - 54900164
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    |||||||||||  || | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcg 54900164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 2394881 - 2394820
Alignment:
Q  191 tcgaaagggtatggtgcgtagacgcactatgttggcggtagtagtcattaatgcaccttcag 252  Q
    |||||||||| |||||| ||||||| |  |||||||||||||||||||| ||| ||||||||    
T  2394881 tcgaaagggtttggtgcttagacgctccgtgttggcggtagtagtcattcatgtaccttcag 2394820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 3150341 - 3150252
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 3150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 467 - 640
Target Start/End: Original strand, 23888713 - 23888886
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| |||||||||  |||||||  |||| |||| ||   |||||||||  ||||||| |||||||| ||||||||||||| ||  ||||||    
T  23888713 gccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaaggctaacggaggatttggacggagggacctttttgatggacgtttgacaaattc 23888812  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||| |||   |||||||| || |||| ||  || || ||||| ||  | |||||||||| ||||||| ||||    
T  23888813 agggactaagctgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 23888886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 707 - 780
Target Start/End: Complemental strand, 32077448 - 32077375
Alignment:
Q  707 tgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaa 780  Q
    ||||||||||||||||| |||||| || ||||||||||   ||||||||||| || |||||| | |||||||||    
T  32077448 tgttgatctccacacaacccatctattcccaataaacaaagtctttcaatttcaactcacaactgcattggtaa 32077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 651
Target Start/End: Original strand, 7884942 - 7884989
Alignment:
Q  604 atttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||| ||||||| |||||||||||||||| |||||| ||||||||    
T  7884942 atttggccgattttttaaaattcaaggacgaatttgaggtattagtcg 7884989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 652
Target Start/End: Complemental strand, 35903914 - 35903823
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||| ||| | |||||||  ||||||| ||  |  || ||||||||||||| ||||||||||||| || |||||| |||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtcgt 35903823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 652
Target Start/End: Complemental strand, 38191984 - 38191893
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || |||||  |||||| |||||| ||||||||| |||||| |||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtcgt 38191893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 46611303 - 46611394
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| |  |||||| |||||||||||||||| |||||| |||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtcgt 46611394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 561 - 652
Target Start/End: Complemental strand, 53092712 - 53092621
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||||||| | |||||||| ||||||| ||  || || |||||  |||||| |||||| || |||||| |||||| |||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtcgt 53092621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 640
Target Start/End: Original strand, 41021011 - 41021117
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||||||||||||  |||||||||||| |||| || ||||| || |||| ||  || |||||||| ||    |||||||||| |||||    
T  41021011 gagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacg 41021110  T
Q  634 aaattga 640  Q
    || ||||    
T  41021111 aatttga 41021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 467 - 640
Target Start/End: Original strand, 18430212 - 18430385
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||  |||||| |  ||||  ||||||   ||||||||||  |||||| |||||||| ||||  ||||||||||  | ||||    
T  18430212 gccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaacggagcacttggacggagggacctttttattggacgtctgacatattc 18430311  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||| ||| | |||||||| || |||| ||  |  |||||||||||    | |||||||||||||||| ||||    
T  18430312 agggactaagttgatatttcgcataattgagggatgaatttggctgacccgttaaaattcaaggacgaatttga 18430385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 46310436 - 46310525
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| ||||||||| |||||| |||||| |||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtc 46310525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||| ||||| |||||  |||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 53187831 - 53187742
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| ||||||||||||| || |||||| |||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 2e-61; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 722 - 877
Target Start/End: Complemental strand, 18941276 - 18941120
Alignment:
Q  722 aatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac-tacacttcacaccaatattctcctccactttccaatatt 820  Q
    |||||||||||| |  |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18941276 aatccatctgttcctcataaacactttctttcaattttaagtcacaagtgcattggtaacgtacacttcacaccaatattctcctccactttccaatatt 18941177  T
Q  821 cacccaccactaccgaactctctctccattgcctccctccgtcgtctcatcttccac 877  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  18941176 cacccaccactgccgaactctctctccattgcctccctccgttgtctcatcttccac 18941120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 39859172 - 39859353
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  39859172 cacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaa 39859271  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  39859272 ggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 24228352 - 24228530
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24228352 cacgtgtatatgacaacacaacatgcaagaggacacatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcag 24228451  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     || |||||||||||||| ||||||| ||  || ||||||||  |||||| |||||||||| |||||||||||| ||||    
T  24228452 agactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 34776858 - 34777036
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||| ||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  34776858 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcag 34776957  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||| ||||||| || ||  ||||||||  |||||| |||||| ||| ||||| |||||| ||||    
T  34776958 ggactaaatagatatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 37796124 - 37796302
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | ||||||||||||||||||||||||||||| || | |||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||    
T  37796124 cacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttgatggacgtccgtaaaattcag 37796223  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||| ||||||||    || |||||||||||||||||||||||||||||| || |||||| ||||    
T  37796224 ggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 490 - 650
Target Start/End: Original strand, 37115490 - 37115650
Alignment:
Q  490 catgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctca 589  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | |||||||||||||  ||    
T  37115490 catgcaagaggacacatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgca 37115589  T
Q  590 aaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| || ||| |||||| ||||||||| ||||||||| |||||| |||||| |||||||    
T  37115590 aaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 469 - 652
Target Start/End: Original strand, 38474086 - 38474269
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| | |||||||||||||||     
T  38474086 cacgtgtacaggacaacacagcatacaagaggacacatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaa 38474185  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| ||||||| ||||| || |||||| |||||||||    
T  38474186 ggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgaggactaatttgaggtattagtcgt 38474269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 472 - 650
Target Start/End: Original strand, 30940371 - 30940549
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  30940371 gtgtacaggacaacacagcatgcaataggacacatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcaggga 30940470  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     ||||||||||||||  |||||| ||| || |||||||| ||||||| |||||||||| || || || ||| |||||||    
T  30940471 ctaaatagatatttcgtaaaattaagagacgaatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 6602516 - 6602335
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||| ||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6602516 cacgtgtacatgacaacacagcatgcaaaaggacatgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 6602417  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  | || ||| || ||||||| ||||||||||| |||| |||||  |||||||    
T  6602416 ggactaaatagatatttcgcaaaattcagggataagtttagccgattttttaaaattcaaggtcgaatttgagttattagtc 6602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 473 - 650
Target Start/End: Original strand, 47386156 - 47386333
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| || ||     
T  47386156 tgtacaggacaacacatcatgcaagagaacacatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagac 47386255  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| ||||||| ||||||| |   || |||||| ||||||||| |||||| ||||||||| |||||| |||||||    
T  47386256 taaataaatatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 470 - 594
Target Start/End: Complemental strand, 45359516 - 45359392
Alignment:
Q  470 acgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagg 569  Q
    ||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |    
T  45359516 acgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaag 45359417  T
Q  570 gattaaatagatatttctcaaaatt 594  Q
    || |||||||||||||| |||||||    
T  45359416 gactaaatagatatttcgcaaaatt 45359392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 473 - 606
Target Start/End: Original strand, 48852294 - 48852427
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||| ||||||||| |||| |||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  48852294 tgtacaagacaacacatcatgtaagaggacacatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggat 48852393  T
Q  573 taaatagatatttctcaaaatttagaaacaaatt 606  Q
    |||||||||||||  |||||||| | ||||||||    
T  48852394 taaatagatattttgcaaaatttgggaacaaatt 48852427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 469 - 628
Target Start/End: Complemental strand, 13168304 - 13168142
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc-- 566  Q
    |||||||||| ||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||      
T  13168304 cacgtgtacatgacaacacagcatgcaagatgacacgtcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcag 13168205  T
Q  567 -agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaa 628  Q
     ||||| |||||||||||||| ||||||| |   || |||||||| ||||||| |||||||||    
T  13168204 gagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 469 - 652
Target Start/End: Original strand, 29996457 - 29996640
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||| |||||| |||| | ||| ||| ||| | ||||||| ||||||||  ||||||| | |||||||||||||||||||||||||    
T  29996457 cacgtgtacatgacaacaaaacatgtaagaagccacgtcatcactattaacggaccttttggatggagggacgaatttgatggacgtctgtaaaattcag 29996556  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||| | |||||||| ||||||| ||  ||||| ||| | ||||||| |||||||||||||||| |||||| |||||||||    
T  29996557 ggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcgt 29996640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 469 - 580
Target Start/End: Original strand, 35693313 - 35693424
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||| |||||||||||||||||||| |||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  35693313 cacgtgtacaagacaacactacatgcaagaggacacatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcag 35693412  T
Q  569 ggattaaataga 580  Q
    ||| ||| ||||    
T  35693413 ggactaattaga 35693424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 27666008 - 27666189
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||| | ||||||||| | ||||||| ||| | ||||||  ||||||||| |||||||   |||||||||||| ||||||||||||    
T  27666008 cacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaacgggccttttggacggagggacggatttgatggacgtttgtaaaattcag 27666107  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  27666108 ggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 469 - 653
Target Start/End: Complemental strand, 56511 - 56327
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||| | ||||||| ||| |||||| ||  |||||||| ||||||     ||||||||||||||||||||||||    
T  56511 cacgtgtacaagacaacacaacatgcaagaagccacatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcag 56412  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgta 653  Q
    ||| ||| | |||||||| ||||||| ||  || || || || ||||||| |||||||||||||||| |||||| ||||||||||    
T  56411 ggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcgta 56327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 23906204 - 23906306
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||    
T  23906204 cacgtgtacaggacaacacagcatgcaagaggacacgtcatcgccattaacggagcttttggacggagggaccattttgatggacgactgtaaaatttag 23906303  T
Q  569 gga 571  Q
    |||    
T  23906304 gga 23906306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| |||||||||||||| ||||||| ||  ||||||||||| |||||||||||||||||||||||| |||||| |||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 469 - 540
Target Start/End: Original strand, 46439473 - 46439544
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggac 540  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  46439473 cacgtgtacaagacaacacaacatgcaagaggacacatcgtcaccactaacggagcttttggacggagggac 46439544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 513 - 647
Target Start/End: Complemental strand, 13018172 - 13018036
Alignment:
Q  513 cactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatat--ttctcaaaatttagaaacaaatttggc 610  Q
    |||||||||||   |||||| |||||||||||||||||||||| ||| |||||||| ||| ||||||||||  ||| | ||||||    || ||||||||    
T  13018172 cactaacggagtgattggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggc 13018073  T
Q  611 tgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||||| |||||||||||| ||| |||||| ||||    
T  13018072 tgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 500 - 651
Target Start/End: Complemental strand, 20478192 - 20478041
Alignment:
Q  500 gacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaa 599  Q
    ||||||||| ||| | |||||||  |||||||| |||||||   ||||||||||||||| |||||||||||| ||| | ||||||||  |||||| ||      
T  20478192 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggt 20478093  T
Q  600 acaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    || || ||||| ||||||| ||||||||||||| |  |||||| ||||||||    
T  20478092 acgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcg 20478041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 560 - 641
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgag 641  Q
    |||||||||||| ||||||| |||||| ||||||||||  || ||||||  ||||||||||||||||||||||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 467 - 640
Target Start/End: Complemental strand, 27955553 - 27955380
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||| ||||||| ||||||||||||||||  | ||||||||| ||  |||||||||||  |||||| ||||||||  |||||||||||||||  ||||||    
T  27955553 gccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcacttggacggagggacctctttgatggacgtctgacaaattc 27955454  T
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||  ||||| | ||||||||  |||||| ||  |  ||||| ||||||   | |||||||||||||||| ||||    
T  27955453 agaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaaggacgaatttga 27955380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 469 - 586
Target Start/End: Original strand, 33038740 - 33038857
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | |||||||||||||||| || |||| |||| ||   ||||| ||||  |||||| |||||||| |||||||||||||||| |||||||||    
T  33038740 cacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaacagagcacttggacggagggacctttttgatggacgtctgaaaaattcag 33038839  T
Q  569 ggattaaatagatatttc 586  Q
    ||| ||| | ||||||||    
T  33038840 ggactaagttgatatttc 33038857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 569 - 650
Target Start/End: Complemental strand, 38549628 - 38549547
Alignment:
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||||||| ||||||| ||  || || |||||||||||||||||||||||||||||| || ||| |||||||    
T  38549628 ggattaaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 3420310 - 3420234
Alignment:
Q  352 gatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagattt 428  Q
    ||||||||||||| |||||||||| ||| ||||||||||   ||||||||||| |||||||||||||||||| ||||    
T  3420310 gatctaggttgtggttccgcttcgaaccggcgtcgctgctcgtgttttgttgtttggtttcgtcttcctctaaattt 3420234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 38484991 - 38485055
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctct 422  Q
    |||||||||||||||||  ||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  38484991 ggttgtgtttccgcttcaaaccggcgtcgctgcccatgttttgttgtcaggtttcgtcttcctct 38485055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 46996643 - 46996762
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| ||||||||  |||| |||| || | ||||||||||  |||||| |||||||| ||||||||||||||||  ||||||    
T  46996643 gccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaacggagcacttggacggagggacctttttgatggacgtctgacaaattc 46996742  T
Q  567 agggattaaatagatatttc 586  Q
    || || ||| | ||||||||    
T  46996743 agtgactaagttgatatttc 46996762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||||||||| ||||||| |||||| ||||||| || |||||||||| | ||||||| ||||||||||||| || |||||| ||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 534 - 640
Target Start/End: Original strand, 8423289 - 8423395
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||| ||||||||  ||||||||||||||||| |||||||| || |||| ||  ||||||||||||||    |||||||||| ||||     
T  8423289 gagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtgaaaattcagggact 8423388  T
Q  634 aaattga 640  Q
    |||||||    
T  8423389 aaattga 8423395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 642
Target Start/End: Complemental strand, 35691516 - 35691435
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||||||| |||  |||||| |||||| ||||||||||| || |||||| | |||||||||||||||||||||||| ||||||    
T  35691516 aaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgagg 35691435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 46437196 - 46437107
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| |||  |||||| |||||| ||||||| |   || ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  46437196 aaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 46437107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 23953988 - 23953869
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| |||||||||||||||| |  |||| |||| ||   ||||||||||  |||||| |||||||| ||||||| ||||||||  ||||||    
T  23953988 gccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcacttggacggagggacctttttgattgacgtctgacaaattc 23953889  T
Q  567 agggattaaatagatatttc 586  Q
    | ||| ||| | ||||||||    
T  23953888 acggactaagttgatatttc 23953869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||| |||| |||||||||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| ||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 23904672 - 23904583
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| ||| ||||||| |||||  ||||||| ||| || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 35403619 - 35403708
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 47384383 - 47384294
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| |||| ||| |||||||||| ||||||| |   || ||||||||| |||||| |||||||||||||||| |||||| |||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtc 47384294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 561 - 649
Target Start/End: Complemental strand, 24226670 - 24226582
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||||||| |||  |||||| |||||| ||||||| |   || |||||||| |||||||||||||||||||||||| |||||| ||||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 480 - 555
Target Start/End: Complemental strand, 1546457 - 1546382
Alignment:
Q  480 gacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgt 555  Q
    |||||||||||||||| |  | ||  ||| || |||||||||| ||||||||| ||||||||||||||||||||||    
T  1546457 gacaacacaacatgcagggagccagctcagcatcactaacggaccttttggacggagggaccattttgatggacgt 1546382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 2167662 - 2167543
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |  ||||| ||| ||   |||| |||||  |||||| |||||||| ||||||||| ||||||  ||||||    
T  2167662 gccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcacttggacggagggacctttttgatgggcgtctgacaaattc 2167563  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  2167562 agggactaagttgatatttc 2167543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 613
Target Start/End: Original strand, 35344298 - 35344377
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctga 613  Q
    |||||||| |||||||||||||||   ||||||||||||||||| |||||||| || |||| ||  || |||||||||||    
T  35344298 gagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctga 35344377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 469 - 567
Target Start/End: Complemental strand, 6056947 - 6056849
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattca 567  Q
    ||||||||||  ||||||  ||||||| || ||||  ||| || |||||||||||| ||||||| || |||| |||||||||||||| ||| |||||||    
T  6056947 cacgtgtacaatacaacaggacatgcaggacgacagctcagcagcactaacggagcatttggacggaaggactattttgatggacgtttgttaaattca 6056849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||||||||  ||||||||||||| ||||||| | | || |||||| | ||||||| ||||||||| |||||| |||||| ||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 22155847 - 22155936
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||  |||||| |||||  ||||||| |   || |||||||| |||||||||||||||||||||||| || ||| |||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 22211762 - 22211851
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||  |||||| |||||  ||||||| |   || |||||||| |||||||||||||||||||||||| || ||| |||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 37114030 - 37113941
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| ||||| |||||||||||||| ||||||| ||  |  |||||| |  |||||| |||||||||||||||| |||||| |||||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtc 37113941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 38305676 - 38305745
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatt 427  Q
    ||||||| |||||||||  ||| |||| ||||||| |||||||||||  | |||||||||||||||||||    
T  38305676 ggttgtggttccgcttcaaaccggcgttgctgcctgtgttttgttgttggatttcgtcttcctctagatt 38305745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 467 - 567
Target Start/End: Complemental strand, 40784529 - 40784429
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||| | |||||||||||||||| || |||| |||| ||  | |||| | || ||||||| |||||||| |||||||||| |||||  ||||||    
T  40784529 gccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaacagcgcatttggacggagggacctttttgatggatgtctgacaaattc 40784430  T
Q  567 a 567  Q
    |    
T  40784429 a 40784429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 567 - 650
Target Start/End: Original strand, 46439539 - 46439622
Alignment:
Q  567 agggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| |||||||||||||| ||||||||| | |||| ||||   ||||||| ||||||||| |||||| |||||  |||||||    
T  46439539 agggactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtc 46439622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 23962485 - 23962383
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| || |||||||||||| ||| ||| || |||| |||||||| ||||| ||| ||||||||    
T  23962485 cacgtgtacaagacaacaagccatgcaggaagacaactcagcagcactaacggagcattttgacggaaggactattttgattgacgtttgttaaattcag 23962386  T
Q  569 gga 571  Q
    |||    
T  23962385 gga 23962383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 27664519 - 27664433
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||||||||| ||| | |||||||  ||||||| ||  ||||| ||||| ||||||| ||||||||||||| || |||||| ||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 1320133 - 1320202
Alignment:
Q  351 cgatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcct 420  Q
    |||||||||||||||| || ||||||||| |||||| || |  |||||||||||  ||||||| ||||||    
T  1320133 cgatctaggttgtgttcccacttcggaccggcgtcgatgtccgtgttttgttgttgggtttcggcttcct 1320202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 589 - 650
Target Start/End: Original strand, 23906295 - 23906356
Alignment:
Q  589 aaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||  || |||||||| ||||||| |||||||||||| ||| |||||| |||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 35402058 - 35401969
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || || || ||||||| |||||||||||||||| |||||  |||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtc 35401969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 3e-60; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 41761689 - 41761867
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| || |||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  41761689 cacgtgtacatgagaacacagcatgcaagaggacacatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcag 41761788  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| |||||||||||||| |||||||| |  || |||||||| |||||||||||||||||||||||| |||||| ||||    
T  41761789 ggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 473 - 650
Target Start/End: Complemental strand, 48813964 - 48813787
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||| ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||  ||||||||||||||||||||||| ||||||||||| |     
T  48813964 tgtacatgacaacacaacatgcaagaggacacatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaac 48813865  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| ||||||  ||||||| ||  | |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  48813864 taaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 474 - 650
Target Start/End: Complemental strand, 41781715 - 41781539
Alignment:
Q  474 gtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggatt 573  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |    
T  41781715 gtacatgacaacacatcatgcaagaggacacatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggact 41781616  T
Q  574 aaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||| ||||||  ||||||| ||  ||||||||| | ||||||| |||||||||| || || |||||| |||||||    
T  41781615 aaataaatattttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 469 - 649
Target Start/End: Complemental strand, 49523305 - 49523125
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||| | ||||||| |||||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||    
T  49523305 cacgtgtacaagacaacacaacatgcaagaaggcacatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcag 49523206  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||| |||||||||||||| ||||||| |   || ||||| || ||||||| ||||||||| |||||| |||||| ||||||    
T  49523205 ggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 610
Target Start/End: Complemental strand, 42980816 - 42980675
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  42980816 cacgtgtacaggacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaag 42980717  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggc 610  Q
    ||| |||||||| |||||  |||||| |   |||||||||||    
T  42980716 ggactaaatagaaatttcgtaaaattcatggacaaatttggc 42980675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 469 - 635
Target Start/End: Complemental strand, 11601851 - 11601686
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  11601851 cacgtgtacatgacaacacaacacgcaagaggacacatcagcatcactaacgaagcttgtggacagagggactattttgatggacgtctgtaaaattcag 11601752  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    ||| | |||| ||||||  |||||||| |  | ||||||| |||||||||||||||||||| |||||    
T  11601751 ggact-aatatatattttgcaaaatttggggataaatttgactgatttttgaaaattcaagaacgaa 11601686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 473 - 651
Target Start/End: Original strand, 35404392 - 35404570
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||    
T  35404392 tgtacatgacaacacaacatggaagaggacacgtcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggat 35404491  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    |||||| ||||||| ||||||| |   || ||||| || ||||||| |||||||||| | |||  ||||| ||||||||    
T  35404492 taaataaatatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaagtatgaatctgaggtattagtcg 35404570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 469 - 631
Target Start/End: Original strand, 48646690 - 48646852
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||| | |||||||||||||||    
T  48646690 cacgtgtaaatgacaacacaacatgcaagaggacacatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcag 48646789  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaagga 631  Q
    ||| |||||||||||||| | ||||| |   || ||||| ||||| |||||||||||||||||    
T  48646790 ggactaaatagatatttcgctaaattcaaggacgaatttagctgacttttgaaaattcaagga 48646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 51012106 - 51011926
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  51012106 cacgtgtacaagacaacacatcatgcaag-ggacacgtcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcag 51012008  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     || |||||||||||||| ||||||| |  ||  |||||| | ||||||| |||||||||||||||| |||||  |||||||    
T  51012007 agactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttgagatattagtc 51011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 2693196 - 2693373
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||||||||| ||||||||| || |||||| ||| ||| ||||| || ||||||||||||||||| | | |||||||||     
T  2693196 cacgtgtacaggacaacacagcatgcaagatgacacatcatcatcactaatggaacttatggacggatggaccattttgatggacat-tttaaaattcaa 2693294  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     || |||||||||||||| |||||||||| || ||||||||||||||||| ||||||||| |||||| |||||| ||||    
T  2693295 agactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 469 - 637
Target Start/End: Original strand, 52868092 - 52868260
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||| ||| | |||||||||||||||||||||  || |||||||||||| | ||||||| ||||||||    
T  52868092 cacgtgtacatgacaacacagcatgcaagaggacacgtcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcag 52868191  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaat 637  Q
     || |||||||||||||| ||||||||| | || |||||| | ||||||| |||||||||||| |||||    
T  52868192 agactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaaggaggaaat 52868260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 43519605 - 43519424
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    ||||||| || ||||||| | ||||||||| | ||||||| ||| | ||| ||| ||||||||| |||||||   |||||||||||| ||||||||||||    
T  43519605 cacgtgtgcatgacaacaaagcatgcaagaagccacatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcag 43519506  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  43519505 ggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 469 - 631
Target Start/End: Complemental strand, 7149720 - 7149558
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||||||||||  | ||||  ||| |  ||||||  |||   |||||| |||||||||||||||| ||| | ||| |||||||     
T  7149720 cacgtgtacaggacaacacaacatgcagaacgacatgtcagcctcactaatagagtgattggacggagggaccattttgattgacctatgttaaattcaa 7149621  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaagga 631  Q
    |||| ||||| ||||||| ||||||||| | |  |||| ||||||||||||||||||||||||    
T  7149620 ggatgaaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaattcaagga 7149558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 560 - 649
Target Start/End: Complemental strand, 20820075 - 20819986
Alignment:
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    |||||||||||| |||||| ||||||  |||||||||| || ||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 467 - 585
Target Start/End: Complemental strand, 35996246 - 35996128
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| |||||||||||||||| |  ||||  ||| ||   ||||||||||  |||||| |||||||| ||||||||||||||||  ||||||    
T  35996246 gccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaacggagcacttggacggagggacctttttgatggacgtctgataaattc 35996147  T
Q  567 agggattaaatagatattt 585  Q
    ||||||||||| |||||||    
T  35996146 agggattaaattgatattt 35996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 515 - 640
Target Start/End: Original strand, 2350496 - 2350621
Alignment:
Q  515 ctaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgat 614  Q
    ||||||||||  ||||||||||||||| |||||||| |||||||  |||||||| |||||||| |||||||| || |||| ||  ||||||||||| ||     
T  2350496 ctaacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccgac 2350595  T
Q  615 ttttgaaaattcaaggacgaaattga 640  Q
       |||||||||| |||| |||||||    
T  2350596 ccatgaaaattcagggactaaattga 2350621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 35401838 - 35401749
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| ||| |||||||||||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 702 - 781
Target Start/End: Complemental strand, 47965516 - 47965437
Alignment:
Q  702 atctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    |||| ||||||||||||||||||||||||||| | |||||||||  ||||||||||| || |||||||| ||| ||||||    
T  47965516 atctgtgttgatctccacacaatccatctgttccgaataaacacagtctttcaatttcaactcacaagtgcatcggtaac 47965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 48645332 - 48645255
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||| |   || |||||| |||||||||||||||||||||||||| |||||| |||||||    
T  48645332 taaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 2827587 - 2827468
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| ||||||||| |||| |||| ||   |||||||||   |||||| |||||||| ||||||||||||||||  ||||||    
T  2827587 gccacgcgtacaagacaacacatcatgcaagacgacagatcagcaaggctaacggaggacttggacggagggacctttttgatggacgtctgacaaattc 2827488  T
Q  567 agggattaaatagatatttc 586  Q
    | ||| ||| | ||||||||    
T  2827487 aaggactaagttgatatttc 2827468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 561 - 640
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||||||||| ||||||| |||||| ||||||| ||  || |||||||| ||||||| |||||||||||||||| ||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 561 - 652
Target Start/End: Original strand, 43508653 - 43508744
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgt 652  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcgt 43508744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 640
Target Start/End: Original strand, 44794768 - 44794874
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||||||| || |||| ||  || |||||| | ||  | |||||||||| ||||     
T  44794768 gagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtgaaaattcagggact 44794867  T
Q  634 aaattga 640  Q
    |||||||    
T  44794868 aaattga 44794874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 608
Target Start/End: Complemental strand, 47941927 - 47941853
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttg 608  Q
    |||||||| ||||||||||||||||  ||||||||||||||||| |||||||| || |||| ||| || ||||||    
T  47941927 gagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttg 47941853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 560 - 629
Target Start/End: Complemental strand, 2691463 - 2691394
Alignment:
Q  560 aaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaag 629  Q
    |||||||||||| |||||||||||||  ||||||||    || |||||||||||||||||||||||||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaag 2691394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 4173740 - 4173829
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 20493916 - 20493827
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||| | |||||||||||||| ||||||| |  ||| |||||||| ||| ||| ||||||||| |||||| |||||| |||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 43507256 - 43507167
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||||| |||||  ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 702 - 877
Target Start/End: Complemental strand, 52525911 - 52525719
Alignment:
Q  702 atctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac-tacac----ttc--acacc 794  Q
    |||| |||||||| |||||||||||||||||||||||| ||||   ||||||||||| ||  ||||| | |||||||||| |||||    |||  |  ||    
T  52525911 atctgtgttgatcaccacacaatccatctgtttccaatgaacatagtctttcaatttcaacacacaactacattggtaacatacacacctttcctaatcc 52525812  T
Q  795 aatattctc---ctccactttccaatattcacccaccactaccg-------aactctctctccattgcctccctccgtcgtctcatcttccac 877  Q
    ||||  |||   |||||||||||||||||| |||||||||||||       ||||| || |||||||||| |||||||||||||| |||||||    
T  52525811 aataaactctcactccactttccaatattctcccaccactaccgtctctgaaactccctttccattgccttcctccgtcgtctcaccttccac 52525719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 640
Target Start/End: Original strand, 10372714 - 10372820
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||||||||||||  |||||||||||| |||| |||||||| || |||| ||  || |||||||| ||    |||||||||| |||||    
T  10372714 gagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacg 10372813  T
Q  634 aaattga 640  Q
    || ||||    
T  10372814 aatttga 10372820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 38929123 - 38929177
Alignment:
Q  350 tcgatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgt 404  Q
    ||||||||||||||||||||||||| |||| ||||| |||||  |||||||||||    
T  38929123 tcgatctaggttgtgtttccgcttcagaccggcgtcactgcccgtgttttgttgt 38929177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 573 - 635
Target Start/End: Original strand, 54387894 - 54387955
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    |||||||||||||| ||||||| || ||| |||||||||||||||| |||||| |||||||||    
T  54387894 taaatagatatttcgcaaaatt-aggaactaatttggctgatttttaaaaatttaaggacgaa 54387955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 581 - 642
Target Start/End: Complemental strand, 11254188 - 11254127
Alignment:
Q  581 tatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    |||||| ||||||||||| ||  ||||||| ||||||| |||||||||||||||| ||||||    
T  11254188 tatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgagg 11254127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 431
Target Start/End: Complemental strand, 31051296 - 31051223
Alignment:
Q  358 ggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatttgtg 431  Q
    |||||||| |||||||| |||| |||||||||||  |||||||||||  |||| | ||||||| ||||||||||    
T  31051296 ggttgtgtgtccgcttcagaccggcgtcgctgcccgtgttttgttgttgggttacatcttcctttagatttgtg 31051223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 46699657 - 46699597
Alignment:
Q  273 tcttgtcgctttttggtttagttgatatttacttcggcgacgacagccttctccttgtcac 333  Q
    |||||| |||||||||||| |||| ||||||||||||||| |   ||||||||||||||||    
T  46699657 tcttgttgctttttggtttggttgttatttacttcggcgatggacgccttctccttgtcac 46699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 550
Target Start/End: Complemental strand, 4519559 - 4519476
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatg 550  Q
    |||||||||||| ||||||||| |||||| |  |||| |||| ||   |||||||||| ||||||| |||||||| ||||||||    
T  4519559 gccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcatttggacggagggacctttttgatg 4519476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 319362 - 319272
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||| | ||| | |||||||| ||||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| ||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcg 319272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 640
Target Start/End: Complemental strand, 10762697 - 10762591
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||||||||||||  |||||||||||| |||| || ||||| || |||| ||  || |||||||| ||    |||||||||| |||||    
T  10762697 gagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacg 10762598  T
Q  634 aaattga 640  Q
    || ||||    
T  10762597 aatttga 10762591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 44972548 - 44972490
Alignment:
Q  513 cactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    |||||||||||| ||||||| || |||| |||||||||||||| ||| ||||| |||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatttaggga 44972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 4169775 - 4169686
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||| || || |||    |||||| |||||||||||||||| |||||| |||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtc 4169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 33266010 - 33266099
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| || ||| || || || ||||||| |||||||||| ||||| |||||  |||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 642
Target Start/End: Original strand, 43521109 - 43521190
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||||||||||| ||| | |||||||| ||||||| | |||| || ||| ||||||||| |||||||||| || || ||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgagg 43521190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 1e-59; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 6899666 - 6899485
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||    
T  6899666 cacgtgtacatgataacacaacatgcaagaggacacatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttag 6899567  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||| || |||||| |||||||    
T  6899566 ggactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 469 - 640
Target Start/End: Complemental strand, 10568580 - 10568409
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  10568580 cacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcag 10568481  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||| |||||| ||||||| | ||||| |   || |||||| |||||||||||||||||||||||||| ||||    
T  10568480 ggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaaggacgaatttga 10568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 469 - 649
Target Start/End: Complemental strand, 11355403 - 11355223
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  11355403 cacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcag 11355304  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||| | ||||||||||||  |||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| ||||||    
T  11355303 ggagttaatagatatttcataaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 469 - 649
Target Start/End: Complemental strand, 20523547 - 20523367
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||  ||||||||| ||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  20523547 cacgtgtacaggacaacacggcatgcaagaagacacatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcag 20523448  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||| |||||||||||||| ||||||| |   || |||||| | ||||||||||||||| |||| ||| |||| | ||||||    
T  20523447 ggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 469 - 600
Target Start/End: Complemental strand, 9398841 - 9398710
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  9398841 cacgtgtacaggacaacacaacatgcaaaatgacacatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcag 9398742  T
Q  569 ggattaaatagatatttctcaaaatttagaaa 600  Q
    ||| |||||||||||||| ||||||| |||||    
T  9398741 ggactaaatagatatttcgcaaaattcagaaa 9398710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 469 - 635
Target Start/End: Original strand, 14338418 - 14338584
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||||||| |||| |||||| || || |||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  14338418 cacgtgtacaggacaacacatcatgcaacaggatacatcatcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcag 14338517  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaa 635  Q
    |||| || |||| ||||| ||||||||    || |||||||||||||||| ||||||||||||||||    
T  14338518 ggatgaattagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 32439035 - 32439215
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||| ||| ||| |||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  32439035 cacgtgtacaagacaacacatcatgcaag-ggacacgtcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcag 32439133  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  || |||||| | ||||||| ||||||||| ||| || |||||| |||||||    
T  32439134 ggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 7049938 - 7049836
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7049938 cacgtgtacatgacaacacaacatgcaagaggacacatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 7049839  T
Q  569 gga 571  Q
    |||    
T  7049838 gga 7049836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 13613525 - 13613706
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||| ||||||||||| |||| |||| | ||||||| ||||||||| ||| ||||||||| ||||||| | |||||||||||||||||||||||||    
T  13613525 cacgtgtataggacaacacagcatgaaagaagccacatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcag 13613624  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| || ||| |||||||    
T  13613625 ggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 32517058 - 32516877
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||| |||| |||||||||| |||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||     
T  32517058 cacgtgtacatgacagcacatcatgcaagagaacacgtcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaa 32516959  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||  ||||||| |||||   |||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  32516958 gggctaaataggtattttgtaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 481 - 647
Target Start/End: Original strand, 7372913 - 7373079
Alignment:
Q  481 acaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaataga 580  Q
    |||||||| |||  ||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |    
T  7372913 acaacacagcatataagagcacacatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaa 7373012  T
Q  581 tatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||| ||||||| ||  || |||||| |  |||||| |||||||||  ||||| |||||| ||||    
T  7373013 tatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 701 - 781
Target Start/End: Complemental strand, 23073416 - 23073336
Alignment:
Q  701 aatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    ||||||||| |||||||||||||||||||||||  |||||||||  |||||||||||| |||||||||||  |||||||||    
T  23073416 aatctatgtagatctccacacaatccatctgttgtcaataaacaatttctttcaatttcaagtcacaagtggattggtaac 23073336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 573 - 641
Target Start/End: Complemental strand, 33276878 - 33276810
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgag 641  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||| |||||||||||||||| |||||    
T  33276878 taaatagatatttcgcaaaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgag 33276810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 8605352 - 8605414
Alignment:
Q  588 caaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||  || ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8605352 caaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 8605414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 34008752 - 34008822
Alignment:
Q  711 gatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    |||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||| || | ||||||||||    
T  34008752 gatctccacataatccatctattttcaataaacaccgtctttcaattttaagtcagaactgcattggtaac 34008822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 573 - 650
Target Start/End: Original strand, 6902910 - 6902986
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||| | ||||||||||  || |||||| |||||||||||||||||||||||||| |||||| |||||||    
T  6902910 taaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtc 6902986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 516 - 632
Target Start/End: Complemental strand, 3456882 - 3456766
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   ||||||||||||||| |||||||||||| ||| | ||||||||  |||||| ||  || || ||||| ||||    
T  3456882 taacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatt 3456783  T
Q  616 tttgaaaattcaaggac 632  Q
    ||| |||||||||||||    
T  3456782 tttcaaaattcaaggac 3456766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 3018373 - 3018492
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||| ||||||||| || | |||| ||   ||||||||||  |||||  |||||||| ||||||||||||||||  ||||||    
T  3018373 gccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttggatggagggacctttttgatggacgtctgacaaattc 3018472  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  3018473 agggactaagttgatatttc 3018492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 581 - 650
Target Start/End: Complemental strand, 7371244 - 7371175
Alignment:
Q  581 tatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| ||||||| ||  || |||||||| |||||||||||||||||||||||| |||||| |||||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 573 - 650
Target Start/End: Original strand, 10569931 - 10570008
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||  ||||||| |   || |||||||||||||||| |||||||||||||||| |||||| |||||||    
T  10569931 taaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtc 10570008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 2968322 - 2968203
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| |||| |||||||||||||  ||||  ||| |||  ||||||||||   |  || || ||||| ||||||||||||||||  ||||||    
T  2968322 gccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacggctaacggagcccgttaacggatggacctttttgatggacgtctgataaattc 2968223  T
Q  567 agggattaaatagatatttc 586  Q
    ||||||||||| ||||||||    
T  2968222 agggattaaattgatatttc 2968203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 640
Target Start/End: Complemental strand, 4641471 - 4641365
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| |||||||||| |||||  ||||||||||||||||| |||||||| || |||| ||  || |||||||| ||    |||||||||| ||||     
T  4641471 gagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggact 4641372  T
Q  634 aaattga 640  Q
    |||||||    
T  4641371 aaattga 4641365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 9400035 - 9400125
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    |||||| |||| ||| |||||||||| ||||||| |   |  |||||| ||||||||| |||||||||||||||| |||||| ||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtcg 9400125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 516 - 650
Target Start/End: Original strand, 32455881 - 32456015
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   ||||||||||||||| ||||||||| || ||| | ||||||||  |||||| ||  || || ||| | ||||    
T  32455881 taacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatt 32455980  T
Q  616 tttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||||||||||||| |  |||||| |||||||    
T  32455981 tttcaaaattcaaggactattttgaggtattagtc 32456015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 11357194 - 11357283
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||| | ||||| |||||||| ||  || |||||| | ||||||| |||||||||||||||| |||| | |||||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtc 11357283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 32518497 - 32518586
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  |  || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 32518586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 603 - 647
Target Start/End: Complemental strand, 21091153 - 21091109
Alignment:
Q  603 aatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||||    
T  21091153 aatttggttgatttttgaaaattcaaggacgaatttgaggtatta 21091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 628
Target Start/End: Original strand, 7051257 - 7051312
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaa 628  Q
    |||||||||||||| ||||||| ||| || |||||| ||||||||| |||||||||    
T  7051257 taaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaa 7051312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 838 - 877
Target Start/End: Original strand, 34008885 - 34008924
Alignment:
Q  838 ctctctctccattgcctccctccgtcgtctcatcttccac 877  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  34008885 ctctctctccattgcctccgtctgtcgtctcatcttccac 34008924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 603 - 641
Target Start/End: Complemental strand, 7049833 - 7049795
Alignment:
Q  603 aatttggctgatttttgaaaattcaaggacgaaattgag 641  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  7049833 aatttggctgatttttgaaaattcaaggaagaatttgag 7049795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Complemental strand, 11163981 - 11163879
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| |||||||||||| || ||||||| || |||| | |||||| ||||| ||| ||||||||    
T  11163981 cacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcag 11163882  T
Q  569 gga 571  Q
    |||    
T  11163881 gga 11163879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 573 - 647
Target Start/End: Complemental strand, 21068702 - 21068628
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||||||||||||||  |||||||    || |||||| |||||| ||||||||||||||||||| |||||| ||||    
T  21068702 taaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 640
Target Start/End: Complemental strand, 29077444 - 29077338
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| ||||||||||||||||  |||||||||||| |||| || ||||| || |||| ||  || |||||||| ||    |||||||||| |||||    
T  29077444 gagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtgaaaattcagggacg 29077345  T
Q  634 aaattga 640  Q
    || ||||    
T  29077344 aatttga 29077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 18645104 - 18645192
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||| ||| ||| | |||||||| ||||||| ||| || |||| | | ||||||| |||||||||||||||| |||||| |||||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacgaatt-gtccgatttttcaaaattcaaggacgaatttgaggtattagtc 18645192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 1e-59; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 31238438 - 31238619
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||| |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31238438 cacgtgtacatgacaacacagcatggaagaggacacgtcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcag 31238537  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  ||||||||||| ||||||| ||||||||||||| || |||||| |||||||    
T  31238538 ggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 2869760 - 2869579
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  2869760 cacgtgtacaggacaacacatcatgcaagatgacacatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttag 2869661  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     || |||||||||||||| ||||||| ||  || |||||| | |||||||||||||||||||||||| |||||| |||||||    
T  2869660 agactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 6818621 - 6818802
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6818621 cacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 6818720  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||  | ||||  ||  || | |||||| ||||||| |||||||||||||||| |||||| |||||||    
T  6818721 ggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 4855910 - 4856090
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||||| |||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4855910 cacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 4856008  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  ||  ||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  4856009 ggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 25278311 - 25278492
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||| |||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||     
T  25278311 cacgtgtacatgacagcacatcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaa 25278410  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||||||| |||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  25278411 ggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 27087463 - 27087283
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||||| || || |||||||||||||||| ||||||||||||    
T  27087463 cacgtgtacaagacaacacagcatgcaag-ggacacatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcag 27087365  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||  ||||||||| | ||||||| |||||| ||||||||| |||||| |||||||    
T  27087364 ggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Complemental strand, 37344523 - 37344342
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||     
T  37344523 cacgtgtacatgacaacacatcatgcaagaggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaa 37344424  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
     || ||||||| |||||| ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  37344423 agactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 50556040 - 50556221
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||| |||||  || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||    
T  50556040 cacgtgtacatgacaacacagcatgcaagatgacacgccatcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttag 50556139  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| |||||||||||||| ||||||| ||| || |||||| ||||||||| ||||||||| |||||| |||||  |||||||    
T  50556140 ggactaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttgagatattagtc 50556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 469 - 614
Target Start/End: Complemental strand, 15104622 - 15104477
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  15104622 cacgtgtacaagacaacacagcatgcaagaagacacatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcag 15104523  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgat 614  Q
    ||| |||||||||||||| ||||||| || ||| ||||||||||||    
T  15104522 ggactaaatagatatttcgcaaaattcaggaacgaatttggctgat 15104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 34778082 - 34778262
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||| ||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  34778082 cacgtgtacaagacaacacaatatgcaag-ggacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcag 34778180  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  ||  ||||||| ||||||| |||||||||||||||| |||||| |||||||    
T  34778181 ggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 490 - 642
Target Start/End: Original strand, 51896116 - 51896268
Alignment:
Q  490 catgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctca 589  Q
    ||||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||| ||    
T  51896116 catgcaagaggacacatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgca 51896215  T
Q  590 aaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||||| ||  ||||||||| ||||||||| |||||| ||||||| | ||||||    
T  51896216 aaattcagggacaaatttgactgattttttaaaatttaaggacggatttgagg 51896268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 3013413 - 3013600
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatg------gacgtctgtaaa 562  Q
    |||||||||| ||||||||  |||||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||      ||||||||||||    
T  3013413 cacgtgtacatgacaacacggcatgcaagaggatacatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaa 3013512  T
Q  563 attcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||| |||||||||||||| ||||||| |   || |||||| ||||| ||| |||||||||||||||| |||||| |||||||    
T  3013513 attcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 469 - 650
Target Start/End: Original strand, 46583499 - 46583680
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||| | | ||||||||| | ||||||| ||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||||||||    
T  46583499 cacgtgtacatgacaagaaagcatgcaagaagccacatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcag 46583598  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||| | |||||||| ||||||| ||  ||||| ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  46583599 ggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 548 - 650
Target Start/End: Original strand, 25278975 - 25279077
Alignment:
Q  548 atggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  648 gtc 650  Q
    |||    
T  25279075 gtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 469 - 647
Target Start/End: Original strand, 33602587 - 33602765
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||||||||||||| | ||||||| ||  ||||||||| ||||||||| ||||||| | ||||| |||||||||||||||||||    
T  33602587 cacgtgtacaagacaacacaacatgcaagaagccacatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcag 33602686  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| ||||    
T  33602687 ggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 472 - 647
Target Start/End: Original strand, 52643566 - 52643736
Alignment:
Q  472 gtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcaggga 571  Q
    |||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||||||| ||| |||||| |     ||||| | |||||||||||||    
T  52643566 gtgtacaggacaacacaatacgcaagagaacacatcatcaccactaacggagcttttggacggagagaccatct-----gacgtttataaaattcaggga 52643660  T
Q  572 ttaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
     |||||| ||||||| ||||||| ||  || |||||  ||||||||| |||||| ||||||||| |||||| ||||    
T  52643661 ctaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 469 - 640
Target Start/End: Complemental strand, 51122086 - 51121915
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||||||||||| |  | ||  ||| || ||||||| || ||||||||| ||||||||||||||||||||||  |  ||||||||    
T  51122086 cacgtgtacatgacaacacaacatgcagggagccagctcaacatcactaacagaccttttggacggagggaccattttgatggacgtgagagaaattcag 51121987  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    |||  |||| |||||||  |||||||| | ||| |  |||||||||  ||| ||||||||||||||| ||||    
T  51121986 ggacgaaattgatattttgcaaaatttgggaacgatgttggctgatgcttgcaaattcaaggacgaagttga 51121915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 500 - 650
Target Start/End: Original strand, 9121642 - 9121792
Alignment:
Q  500 gacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaa 599  Q
    ||||||||| ||| | |||||||  |||||||| |||||||   ||||||||||||||| |||||||||||| ||| | ||||||||  |||||||||      
T  9121642 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttaggg 9121741  T
Q  600 acaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    || || ||||| ||||||| ||||||||||||| |  |||||| |||||||    
T  9121742 acgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 9121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 36895451 - 36895570
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||||||||||||| |||| |||| ||   ||||||||||  ||||||  ||||||| ||||||||||||||||  ||||||    
T  36895451 gccacgcgtacaagacaacacaacatgcaagacgacagatcagcatggctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattc 36895550  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  36895551 agggactaagttgatatttc 36895570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 25278931 - 25278854
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||||||||||| ||||||| ||  ||||||||| |||||||||||||||||||||| ||| |||||| |||||||    
T  25278931 taaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||| | |||||||||||||| ||||||| ||  ||||||||| | ||||||| |||||||||||||||| |||||| |||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 52641965 - 52641888
Alignment:
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| ||||||| ||||||| ||  || ||||||||||||||||||||||||||||||||| |||||| |||||||    
T  52641965 taaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 52641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    |||||||| || |||||||||||||| ||||||| || ||| |||||| ||||||||| |||||| ||||||||| |||||| ||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 467 - 557
Target Start/End: Complemental strand, 31801816 - 31801726
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtct 557  Q
    |||||| ||||| ||||||||||||||||||| |||| |||| ||   ||||||||||  |||||| |||||||| |||||||||||||||    
T  31801816 gccacgcgtacaagacaacacaacatgcaagacgacaaatcagcatggctaacggagcacttggacggagggacctttttgatggacgtct 31801726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 563 - 650
Target Start/End: Complemental strand, 8168029 - 8167942
Alignment:
Q  563 attcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||| ||| | |||||||| ||||||| ||| || || ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8167942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Complemental strand, 42134665 - 42134546
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |  ||||  ||| ||   ||||||||||  |||||| |||||||| ||||||||||||||||  ||||||    
T  42134665 gccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaacggagcacttggacggagggacctttttgatggacgtctgacaaattc 42134566  T
Q  567 agggattaaatagatatttc 586  Q
    ||||| ||| | ||||||||    
T  42134565 agggactaagttgatatttc 42134546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 467 - 586
Target Start/End: Original strand, 46638748 - 46638867
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||| ||||| ||||||||||||||||||  |||| |||| ||   ||||||||||  |||||| |||||||| ||||| ||||||||||  ||||||    
T  46638748 gccacgcgtacaagacaacacaacatgcaaggcgacagatcagcatggctaacggagcacttggacggagggacctttttggtggacgtctgacaaattc 46638847  T
Q  567 agggattaaatagatatttc 586  Q
    | ||| ||| | ||||||||    
T  46638848 aaggactaagttgatatttc 46638867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 700 - 781
Target Start/End: Original strand, 20602309 - 20602389
Alignment:
Q  700 gaatctatgttgatctccacacaatccatctgtttccaataaacaccttctttcaattttaagtcacaagttcattggtaac 781  Q
    |||||| | |||||||| ||||||||||| |||| |||||||||||  ||||||||||| || |||||| ||||||||||||    
T  20602309 gaatctctattgatctc-acacaatccatttgttcccaataaacactgtctttcaatttcaactcacaacttcattggtaac 20602389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 574 - 650
Target Start/End: Original strand, 37088149 - 37088225
Alignment:
Q  574 aaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    |||||| |||||| ||||||| || ||| |||||||| ||||||| |||||||||||| ||| |||||| |||||||    
T  37088149 aaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 420
Target Start/End: Original strand, 19597878 - 19598016
Alignment:
Q  282 tttttggtttagttgatatttacttcggcgacgaca-gccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgcttcggacca 380  Q
    ||||||| || |||| | ||||||||||| |||| | ||||||||||||| ||| || |||| || ||  ||||||||||||||||||| |||| ||||     
T  19597878 tttttggcttggttgttgtttacttcggc-acgagacgccttctccttgttaccgacggatgtctgtttacgatctaggttgtgtttccacttcagaccg 19597976  T
Q  381 gcgtcgctgcctatgttttgttgtctggtttcgtcttcct 420  Q
    |||||| ||||  |||| ||||||  |||||| |||||||    
T  19597977 gcgtcgttgcccgtgttctgttgttgggtttcatcttcct 19598016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 469 - 572
Target Start/End: Complemental strand, 43868795 - 43868692
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||  ||||||| || ||||  ||| || |||||||||||| ||||||| || |||| ||||||||||| || ||| |||||||     
T  43868795 cacgtgtacaagacaacatgacatgcatgacgacaactcagcagcactaacggagcatttggacggaaggactattttgatggatgtttgttaaattcaa 43868696  T
Q  569 ggat 572  Q
    ||||    
T  43868695 ggat 43868692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 561 - 640
Target Start/End: Complemental strand, 51894656 - 51894577
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattga 640  Q
    ||||||||||| |||||| ||||||| ||||||| ||| ||||||||| |  |||||| |||||||||| ||||| ||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttga 51894577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 31586351 - 31586273
Alignment:
Q  353 atctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagatttgtg 431  Q
    |||| ||| ||||| ||||||| |||| |||||||||||  |||||||||||  ||||||||||| |||| ||||||||    
T  31586351 atctgggtcgtgttcccgcttcagaccggcgtcgctgcccgtgttttgttgttgggtttcgtctttctctggatttgtg 31586273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 34776658 - 34776568
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcg 651  Q
    ||||||||||| ||| | ||||||||  |||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcg 34776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 516 - 650
Target Start/End: Original strand, 47013072 - 47013206
Alignment:
Q  516 taacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatt 615  Q
    |||||||  |||||||| |||||||   |||||||||||| || |||||||||||| ||| | ||||||||  |||||| ||  || || ||| | ||||    
T  47013072 taacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatt 47013171  T
Q  616 tttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| ||||||||||||| |  |||||| |||||||    
T  47013172 tttcaaaattcaaggactattttgaggtattagtc 47013206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||| | ||||||| |||||||||||||||| |||||| |||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 27089279 - 27089368
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||||||| | |||||||| ||||||| |   || || || || ||||||| |||||||||||||||| |||||| |||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 527 - 640
Target Start/End: Original strand, 35479976 - 35480089
Alignment:
Q  527 ttggacagagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattc 626  Q
    |||||| || ||||| ||||||||||||||||  |||||||  |||||| | |||||||| || |||| ||  |  ||||||||||||   |||||||||    
T  35479976 ttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattc 35480075  T
Q  627 aaggacgaaattga 640  Q
    ||||||||| ||||    
T  35480076 aaggacgaagttga 35480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 46582099 - 46582010
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || ||||| ||||||| ||||||||||||| || |||||| |||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtc 46582010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 561 - 653
Target Start/End: Original strand, 8169568 - 8169660
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtcgta 653  Q
    ||||||||||| ||| | |||||||   |||||| ||  || || ||||| ||||||| |||||||||||||||| |||||| ||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcgta 8169660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 24450695 - 24450635
Alignment:
Q  192 cgaaagggtatggtgcgtagacgcactatgttggcggtagtagtcattaatgcaccttcag 252  Q
    ||||||||| |||||| ||||||| |  |||||||||||||||||||| ||| ||||||||    
T  24450695 cgaaagggtttggtgcttagacgctccgtgttggcggtagtagtcattcatgtaccttcag 24450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 586
Target Start/End: Complemental strand, 27940724 - 27940672
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttc 586  Q
    |||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||    
T  27940724 gagggacctttttgatggacgtctgataaattcaaggattaaattgatatttc 27940672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 41919892 - 41919968
Alignment:
Q  352 gatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtcttcctctagattt 428  Q
    ||||| ||||||| |||||||||  |||||||||| ||||  |||||||||||  | |||| |||||||||||||||    
T  41919892 gatctgggttgtggttccgcttcaaaccagcgtcgttgcccgtgttttgttgtgggatttcatcttcctctagattt 41919968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 467 - 567
Target Start/End: Original strand, 45380925 - 45381025
Alignment:
Q  467 gccacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattc 566  Q
    |||||||||||| ||||||||| |||||| |  ||||  ||||||   ||||||||||  |||||| |||| ||| ||||||||||||||||  ||||||    
T  45380925 gccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaacggagcacttggacggaggaacctttttgatggacgtctgacaaattc 45381024  T
Q  567 a 567  Q
    |    
T  45381025 a 45381025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 561 - 649
Target Start/End: Complemental strand, 50554252 - 50554164
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagt 649  Q
    ||||||||| | ||||||| |||||  ||||||| ||  || |||||| | ||||||| |||||||||||||||| |||||| ||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 420
Target Start/End: Complemental strand, 24450551 - 24450450
Alignment:
Q  318 gccttctccttgtcaccaacagatgccttttatcgatctaggttgtgtttccgcttcggaccagcgtcgctgcctatgttttgttgtctggtttcgtctt 417  Q
    |||||||||||||||||  ||||||||| ||  ||| |||||| ||||| |||||||  | | |||||||||||  |||||||||||  |||||| ||||    
T  24450551 gccttctccttgtcaccgtcagatgcctgtttacgacctaggtagtgttcccgcttc-aaactgcgtcgctgcccgtgttttgttgttgggtttcatctt 24450453  T
Q  418 cct 420  Q
    |||    
T  24450452 cct 24450450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 37345962 - 37346051
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  |  || ||||  ||||||| |||||||||||||||| |||||| |||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 1e-40; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 473 - 650
Target Start/End: Complemental strand, 3471 - 3294
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||||||||||| | ||||||||| | ||||||| ||| | ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||     
T  3471 tgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggac 3372  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| | |||||||| ||||||| ||  ||||| ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  3371 taatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 473 - 650
Target Start/End: Complemental strand, 4643 - 4466
Alignment:
Q  473 tgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggat 572  Q
    |||||||||||||| | ||||||||| | ||||||| ||| | ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||     
T  4643 tgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggac 4544  T
Q  573 taaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||| | |||||||| ||||||| ||  ||||| ||||| ||||||| |||||||||||||||| |||||| |||||||    
T  4543 taatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 14343 - 14432
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||| | |||||||| ||||||| ||  || || || || ||||||| |||||||||||||||| |||||| |||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 83; Significance: 9e-39; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 469 - 647
Target Start/End: Complemental strand, 1443 - 1266
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| |||||||| ||| || ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1443 cacgtgtacaagacaacacagcatgcaag-ggatacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 1345  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaatta 647  Q
    ||| ||||||||||||||  |||||| |   || |||||  |  |||||| |||||||||||||| | |||||| ||||    
T  1344 ggactaaatagatatttcataaaattcatggacgaatttaaccaattttttaaaattcaaggacggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 469 - 648
Target Start/End: Complemental strand, 8441 - 8264
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| ||||||||| | ||||||||||||| ||| ||||||||||| ||||||||||| || | ||||||||||||||||  | ||||||||||    
T  8441 cacgtgtacaagacaacacatcttgcaagaggacacgtcatcaccactaacgaagcttttggacggatgtaccattttgatggacg--tataaaattcag 8344  T
Q  569 ggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattag 648  Q
    ||| |||||||||||||  ||||||| |  ||| ||||||||  |||||| |||||||||||||||| |||||| |||||    
T  8343 ggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

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Target: scaffold0024 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 469 - 567
Target Start/End: Complemental strand, 37385 - 37287
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattca 567  Q
    |||||||| ||||||||||||||| ||||| |||| |||| ||||| |||||||| |||||||  |||  ||||||||||| |||||||||||||||||    
T  37385 cacgtgtaaaggacaacacaacatacaagaagacatatcatcaccattaacggagtttttggatggagaaaccattttgatagacgtctgtaaaattca 37287  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 574 - 642
Target Start/End: Complemental strand, 436341 - 436273
Alignment:
Q  574 aaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgagg 642  Q
    ||||||||||||| |||||||||   |  ||||||||||||||||||||||||||| ||||| ||||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgagg 436273  T

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Target: scaffold0477 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 640
Target Start/End: Original strand, 6642 - 6748
Alignment:
Q  534 gagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacg 633  Q
    |||||||| |||||||||| |||||  ||||||||||||||||| |||||||| || |||| ||  || |||||||| ||    |||||||||| ||||     
T  6642 gagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtgaaaattcagggact 6741  T
Q  634 aaattga 640  Q
    |||||||    
T  6742 aaattga 6748  T

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Target: scaffold0345 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 561 - 650
Target Start/End: Original strand, 1555 - 1644
Alignment:
Q  561 aaattcagggattaaatagatatttctcaaaatttagaaacaaatttggctgatttttgaaaattcaaggacgaaattgaggaattagtc 650  Q
    ||||||||||| ||||| | ||||| |||||||| ||  || |||||| | ||||||| |||||||||||||||| |||| | |||||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtc 1644  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 469 - 571
Target Start/End: Original strand, 36793 - 36895
Alignment:
Q  469 cacgtgtacaggacaacacaacatgcaagaggacacatcaccaccactaacggagcttttggacagagggaccattttgatggacgtctgtaaaattcag 568  Q
    |||||||||| |||||||   |||||| || ||||  ||| |||||||||||| || ||||||| || |||| | |||||| ||||| ||| ||||||||    
T  36793 cacgtgtacaagacaacaagccatgcaggaagacaactcagcaccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcag 36892  T
Q  569 gga 571  Q
    |||    
T  36893 gga 36895  T

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