View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20976_low_6 (Length: 424)

Name: NF20976_low_6
Description: NF20976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20976_low_6
NF20976_low_6
[»] chr7 (8 HSPs)
chr7 (17-407)||(5637108-5637502)
chr7 (68-348)||(11466955-11467233)
chr7 (68-240)||(6272151-6272324)
chr7 (163-226)||(18497051-18497114)
chr7 (295-373)||(20347274-20347350)
chr7 (182-236)||(20461269-20461323)
chr7 (148-262)||(22334284-22334398)
chr7 (68-109)||(3401042-3401083)
[»] chr1 (15 HSPs)
chr1 (86-367)||(34931880-34932164)
chr1 (68-368)||(23420529-23420828)
chr1 (68-363)||(33175538-33175829)
chr1 (210-262)||(9251745-9251797)
chr1 (73-212)||(31314604-31314742)
chr1 (214-262)||(9354026-9354074)
chr1 (68-106)||(14932260-14932298)
chr1 (210-267)||(34521938-34521995)
chr1 (74-118)||(23224582-23224626)
chr1 (68-122)||(15571498-15571552)
chr1 (214-262)||(9329064-9329112)
chr1 (68-108)||(11768938-11768978)
chr1 (67-107)||(13153585-13153625)
chr1 (224-260)||(23520742-23520778)
chr1 (183-259)||(25132801-25132877)
[»] chr5 (4 HSPs)
chr5 (81-367)||(22930830-22931114)
chr5 (275-365)||(30791425-30791514)
chr5 (163-350)||(7741317-7741503)
chr5 (275-373)||(14207844-14207941)
[»] chr4 (12 HSPs)
chr4 (69-329)||(34332613-34332869)
chr4 (68-367)||(21048114-21048409)
chr4 (196-353)||(10577420-10577577)
chr4 (68-122)||(30797655-30797709)
chr4 (217-311)||(39133832-39133925)
chr4 (182-239)||(7144169-7144226)
chr4 (210-261)||(22219761-22219812)
chr4 (196-310)||(23354528-23354645)
chr4 (181-242)||(9288974-9289035)
chr4 (151-235)||(7023159-7023242)
chr4 (68-96)||(9289120-9289148)
chr4 (149-257)||(29438451-29438559)
[»] chr6 (11 HSPs)
chr6 (68-353)||(16440304-16440585)
chr6 (68-134)||(16174399-16174465)
chr6 (216-311)||(12967106-12967201)
chr6 (216-311)||(12969292-12969387)
chr6 (216-311)||(12971479-12971574)
chr6 (83-128)||(26498765-26498810)
chr6 (186-258)||(8036863-8036935)
chr6 (72-128)||(12960314-12960370)
chr6 (307-367)||(16174460-16174520)
chr6 (183-238)||(17859108-17859163)
chr6 (182-263)||(15376761-15376843)
[»] chr3 (9 HSPs)
chr3 (73-367)||(26419696-26419991)
chr3 (74-119)||(2728509-2728554)
chr3 (71-119)||(25189338-25189386)
chr3 (181-216)||(8401387-8401422)
chr3 (183-257)||(8713981-8714055)
chr3 (183-257)||(9065868-9065942)
chr3 (74-108)||(10342973-10343007)
chr3 (68-122)||(28205156-28205210)
chr3 (210-262)||(2728625-2728677)
[»] chr8 (14 HSPs)
chr8 (68-237)||(24926703-24926873)
chr8 (194-344)||(35134612-35134762)
chr8 (217-373)||(6887243-6887398)
chr8 (182-262)||(14185478-14185557)
chr8 (71-374)||(28259433-28259735)
chr8 (68-312)||(14140015-14140258)
chr8 (68-123)||(6887104-6887159)
chr8 (83-207)||(28075537-28075661)
chr8 (275-353)||(28075449-28075527)
chr8 (73-130)||(35134494-35134551)
chr8 (217-261)||(11307834-11307878)
chr8 (84-119)||(16048686-16048721)
chr8 (197-267)||(16048798-16048868)
chr8 (181-237)||(13581982-13582038)
[»] scaffold0280 (1 HSPs)
scaffold0280 (224-366)||(17177-17318)
[»] chr2 (5 HSPs)
chr2 (275-374)||(25397314-25397413)
chr2 (187-254)||(19593096-19593163)
chr2 (183-257)||(20518298-20518372)
chr2 (291-353)||(24438383-24438444)
chr2 (183-308)||(19541558-19541684)
[»] scaffold0171 (1 HSPs)
scaffold0171 (197-262)||(7171-7236)


Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 17 - 407
Target Start/End: Complemental strand, 5637502 - 5637108
Alignment:
Q  17 tgcaatgggcatgccgatgatgaaatttggcaagtgaaccaaatcatacaattatcgtctccacaaggattgtcgttcaacttagcaattagagaaattt 116  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5637502 tgcaatgggcatgcagatgatgaaaattggcaagtgaaccaaatcataaaattatcgtctccacaaggattgtcgttcaacttagcaattagagaaattt 5637403  T
Q  117 attagaagtaaatagaatataaaagatgaaattggttgcagcgttataattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgac 216  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5637402 attagaagtaaatagaatataaaagatgaaagtggttgtagcgttataattgtcttgcctagtgcgagattaggttggtctgattcagatgcgtaacgac 5637303  T
Q  217 gattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaattatg 316  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5637302 gattagagaatccttgaatccccctttcatctttgttggaattaacgcagttagttactagtttatgacatgtcttttgatttaagaaagtagtattatg 5637203  T
Q  317 accccatga----tatagcagtggaagttttattttaatattgccacaattcaaccggttatggttgtggcgagatgagtcaaaaccctaaattc 407  Q
    |||||||||    ||||||||||||||||||||||||||||| ||||||||||||| ||||   |||||||||||||||||||||||||||||||    
T  5637202 accccatgatatatatagcagtggaagttttattttaatatttccacaattcaaccagttacaattgtggcgagatgagtcaaaaccctaaattc 5637108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 348
Target Start/End: Original strand, 11466955 - 11467233
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataatt 167  Q
    |||| ||||||||| |||||||| |||||||||||||||||   |||||||||||||||| ||||||| |||  |||||| |||| |||  ||| | |||    
T  11466955 ttattgtctccacatggattgtcattcaacttagcaattagcagaatttattagaagtaa-tagaatagaaacaatgaaagtggtagcaaggttttgatt 11467053  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcccccttt-catctttgttggaattaacgtag 266  Q
    || ||| | | | |||||||| |||  |||||||||||||||||||||||||||| |||||||||||||||| ||| | |||| |||||||||||    |    
T  11467054 gt-ttgtccaatgcgagattaagtttatttgattcagatgcgtaacgacgattagggaatccttaaatccccatttccgtcttagttggaattaatacgg 11467152  T
Q  267 ttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttatttt 348  Q
    |||  || || |||||||| || ||||||||||| |||||||||||| ||||| | ||||||| ||||||||||||||||||    
T  11467153 ttaactattactttatgacttggcttttgatttacgaaagtagaatt-tgacctcttgatataacagtggaagttttatttt 11467233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 240
Target Start/End: Original strand, 6272151 - 6272324
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaa-gtaaatagaatataaaagatgaaattggttgcagcgttataat 166  Q
    ||||||||| ||||  |||| ||||||||| ||| | ||||| | ||||||||||| ||||||| || |  |||||||||| ||||||||  |||  |||    
T  6272151 ttatcgtctacacagagattatcgttcaacctagtatttagatatatttattagaatgtaaataaaagaggaaagatgaaagtggttgcatggtttaaat 6272250  T
Q  167 tgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccc 240  Q
    || || ||| | |  ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  6272251 tgcctggcccaatgtgagattaggttggtttgattcagatacgtaacgacgattagagaatctttgaatccccc 6272324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 18497114 - 18497051
Alignment:
Q  163 taattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaa 226  Q
    |||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18497114 taattgccttgcctaatgcgagattaggttggtttgattcatatgcgtaacgacgattagagaa 18497051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 20347350 - 20347274
Alignment:
Q  295 gatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaaccggtta 373  Q
    |||||||||||||| ||  |||||||||||||| | |||||||  ||| |||||||||| ||| |||||||||||||||    
T  20347350 gatttaagaaagtaaaac-atgaccccatgataaatcagtggacattt-attttaatatcgccgcaattcaaccggtta 20347274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 20461269 - 20461323
Alignment:
Q  182 gagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatc 236  Q
    ||||||| |||||||||||||||||||| ||||  |||| |||||||||| ||||    
T  20461269 gagattatgttggtttgattcagatgcgcaacggtgattggagaatccttgaatc 20461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 22334284 - 22334398
Alignment:
Q  148 ttggttgcagcgttataattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatc 247  Q
    |||||||||| ||| |||||||  |||| | | ||||||||||||   |||||||| | | ||||||  |||||| |||||||| |||||||| | | ||    
T  22334284 ttggttgcagggttttaattgttctgcccaatgcgagattaggttttgttgattcaaaagagtaacggtgattagggaatcctttaatcccccctccgtc 22334383  T
Q  248 tttgttggaattaac 262  Q
    |||||||||| ||||    
T  22334384 tttgttggaactaac 22334398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 3401083 - 3401042
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattaga 109  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  3401083 ttatcgtctccatatgaattgtcgttcaacttagcaattaga 3401042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 86 - 367
Target Start/End: Original strand, 34931880 - 34932164
Alignment:
Q  86 ttgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataattgtcttgcctagttcgaga 185  Q
    |||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||| | ||||||||| ||| ||||||  ||||  | | ||| |    
T  34931880 ttgtcgttcaacttagcaattagcagaatttattagaagtaaataaaatataaaagatgagagtggttgcagggttttaattggtttgctcaatgcgata 34931979  T
Q  186 ttaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcccc-ctttcatctttgttggaattaacgtagttagttactagtttatga 284  Q
    ||||||||||| ||||||  |||||| || ||||||  |||||||||||||||| ||||| |||||||||||||||  || |||  ||| ||||||||||    
T  34931980 ttaggttggttggattcaagtgcgtagcggcgattaaggaatccttaaatccccactttcgtctttgttggaattattgttgttgattattagtttatga 34932079  T
Q  285 catgtcttttgatttaagaaagtagaattatgacccc-atgatatagcagtggaagtttta-ttttaatattgccacaattcaac 367  Q
    |  |||||||||||||  ||| ||||||||||||||| ||||||||| ||||||||||||| |||| |||| |||||||||||||    
T  34932080 cccgtcttttgatttacaaaaatagaattatgacccctatgatatagaagtggaagttttattttttatatcgccacaattcaac 34932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 68 - 368
Target Start/End: Original strand, 23420529 - 23420828
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataatt 167  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||  ||||||||  ||||||| ||| ||||||||  ||| ||  |    
T  23420529 ttatcgtctccacaaggattgtcgttcaacttagcaattaacgaa-tttattagaagcgaatagaatgaaaaagataaaagtggttgcatggttttacat 23420627  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcccc-ctttcatctttgttggaattaacgtag 266  Q
    ||| |||| | | |   ||||||||||||||||||||||||||||| ||||| || |||||||  ||||||| ||| | |||||||||||||||| ||      
T  23420628 gtcctgcccaatgcactattaggttggtttgattcagatgcgtaacaacgataagggaatcctagaatccccgcttccgtctttgttggaattaatgtgc 23420727  T
Q  267 ttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaa 366  Q
    ||| ||| || ||||| || ||||||| |||||| |||| ||||||||||||||| |||||||| |||| |||||||||||| |||| ||| ||||||||    
T  23420728 ttaatta-taatttattacttgtctttggatttatgaaattagaattatgaccccttgatatagtagtgaaagttttatttttatatcgccgcaattcaa 23420826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 363
Target Start/End: Original strand, 33175538 - 33175829
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataatt 167  Q
    ||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| | || || |||| |||  ||| | |  ||| |||||    
T  33175538 ttatcttctccacatagattgtcgttcaacttagcaattagaggaatttattagaagtaaataaactaaaagagat-aaagcggtggtaaggttttaatt 33175636  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagt 267  Q
    |||  ||  | | |||||||| |||||||||| ||||||||||||||||||||||  ||||||| ||||||| || | |||||||||||||||| |  ||    
T  33175637 gtcccgctcaatacgagattatgttggtttgactcagatgcgtaacgacgattaggaaatccttgaatccccattccttctttgttggaattaatgcggt 33175736  T
Q  268 tagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaatt 363  Q
    || ||| ||||||||||| |||| |||||||||  ||| ||||| ||||||| | ||||| |||||||||||||||| ||| |||||||| |||||    
T  33175737 taattattagtttatgacttgtc-tttgatttacaaaattagaa-tatgacctcgtgatagagcagtggaagttttaattt-atattgccgcaatt 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 9251745 - 9251797
Alignment:
Q  210 taacgacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||||||||| ||||||||||||||| | |||||||||||||||||||||    
T  9251745 taacgacgattagggaatccttaaatccctccttcatctttgttggaattaac 9251797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 31314742 - 31314604
Alignment:
Q  73 gtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataattgtctt 172  Q
    ||||||||| | ||| || |||||||||||||||||  ||||||||||||| |||||| ||||||||| || ||| | |||   | ||| |||||||| |    
T  31314742 gtctccacatgaattttcattcaacttagcaattagcaaaatttattagaaataaataaaatataaaatat-aaagtagttatggtgttttaattgtcat 31314644  T
Q  173 gcctagttcgagattaggttggtttgattcagatgcgtaa 212  Q
    ||||| |  |||||||||||| ||| ||||||||| ||||    
T  31314643 gcctaatgtgagattaggttgctttaattcagatgtgtaa 31314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 9354074 - 9354026
Alignment:
Q  214 gacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  9354074 gacgattagggaatacttaaatccctctttcatctttgttggaattaac 9354026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 14932260 - 14932298
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaatt 106  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14932260 ttatcgtctccacaaagattgtcgttcaacttagcaatt 14932298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 34521995 - 34521938
Alignment:
Q  210 taacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagt 267  Q
    ||||||||||||| |||||||| |||||| | ||| ||||||||||||||||| ||||    
T  34521995 taacgacgattagggaatccttgaatccctccttcgtctttgttggaattaacttagt 34521938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 23224626 - 23224582
Alignment:
Q  74 tctccacaaggattgtcgttcaacttagcaattagagaaatttat 118  Q
    |||||||| ||||||||||||||||||||||||||| ||| ||||    
T  23224626 tctccacatggattgtcgttcaacttagcaattagaaaaacttat 23224582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 15571498 - 15571552
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattaga 122  Q
    |||| ||||||||| ||||||||||| |||||||||||||  | |||||||||||    
T  15571498 ttattgtctccacatggattgtcgttgaacttagcaattaatggaatttattaga 15571552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 9329112 - 9329064
Alignment:
Q  214 gacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||||| |||| ||| |||||| | |||||||||||||||||||||    
T  9329112 gacgattagggaatacttgaatccctccttcatctttgttggaattaac 9329064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 11768938 - 11768978
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattag 108  Q
    |||||||||||||| ||||||||||||||| | ||||||||    
T  11768938 ttatcgtctccacatggattgtcgttcaacgttgcaattag 11768978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 13153625 - 13153585
Alignment:
Q  67 attatcgtctccacaaggattgtcgttcaacttagcaatta 107  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  13153625 attatcgtctccacagggattgtcgttcaacgaagcaatta 13153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 23520742 - 23520778
Alignment:
Q  224 gaatccttaaatccccctttcatctttgttggaatta 260  Q
    |||| |||||||||||| |||||||||||||||||||    
T  23520742 gaattcttaaatccccccttcatctttgttggaatta 23520778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 25132801 - 25132877
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaatt 259  Q
    |||||| ||| | |||||||| |||  |||||  |||||| |||||||| |||| ||| ||||||||||||||||||    
T  25132801 agattaagtttggttgattcaaatgtttaacggtgattagggaatccttgaatctccccttcatctttgttggaatt 25132877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 81 - 367
Target Start/End: Complemental strand, 22931114 - 22930830
Alignment:
Q  81 aaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataattgtcttgcctagtt 180  Q
    ||||||| ||||||||||||| |||| ||| ||| ||||| |||||||||||||| |||| |||||| | ||||||  ||| ||||||| ||||| | |     
T  22931114 aaggattttcgttcaacttagtaattggaggaatgtattaaaagtaaatagaatagaaaatatgaaagtagttgcattgttttaattgttttgcccaata 22931015  T
Q  181 cgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagttt 280  Q
    ||||||| || |||||||||||| |||||||||| |||||||  ||| ||| ||| |||||||| |||||||| ||||||| | |||||| |  ||| ||    
T  22931014 cgagattcgggtggtttgattcaaatgcgtaacggcgattaggaaattcttcaat-cccctttcgtctttgtttgaattaatgcagttagctgttag-tt 22930917  T
Q  281 atgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaac 367  Q
    ||||| |||||||||||||| ||||||||| |||||||| | ||||||| | |||||||||| ||||| |||| ||| |||||||||    
T  22930916 atgacttgtcttttgatttacgaaagtagagttatgacctcgtgatatatcggtggaagtttgatttttatatcgccgcaattcaac 22930830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 30791514 - 30791425
Alignment:
Q  275 tagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattca 365  Q
    |||||||||||||||| ||||||||||||||||||||  |||| ||||||||  |  |||||||||||||||||||||||| | |||||||    
T  30791514 tagtttatgacatgtcgtttgatttaagaaagtagaa-catgatcccatgatgaataagtggaagttttattttaatattgtcgcaattca 30791425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 163 - 350
Target Start/End: Original strand, 7741317 - 7741503
Alignment:
Q  163 taattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||||||||| | | ||| |||||  || | ||||||||| |  ||||| |||||| | ||||||| ||||||||||   ||||||||||| |||||    
T  7741317 taattgtcttgcccaatgcgaaattagtatgttgtgattcagaagtttaacgtcgattacaaaatccttgaatcccccttctgtctttgttggacttaac 7741416  T
Q  263 gtagttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaa 350  Q
       |||  ||| ||||||||||||||| |||  |||||||||||||||| |||||||   |||| || ||| ||||||||||||||||    
T  7741417 tcggttgattattagtttatgacatgtttttcaatttaagaaagtagaa-tatgaccatgtgatgtatcagaggaagttttattttaa 7741503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 373
Target Start/End: Original strand, 14207844 - 14207941
Alignment:
Q  275 tagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaaccggtta 373  Q
    ||||||||||||||||||| |||||||||||||||||  |||  | |||||| || || |||||||||||||||||| ||||| ||||| |||| ||||    
T  14207844 tagtttatgacatgtctttcgatttaagaaagtagaa-catggacacatgatgtatcaatggaagttttattttaatcttgccgcaatttaaccagtta 14207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 69 - 329
Target Start/End: Original strand, 34332613 - 34332869
Alignment:
Q  69 tatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataattg 168  Q
    ||||||||||||||||| | ||||||||||||||||| | | || ||||||||||||| ||| ||   ||||||| ||| |||||| || ||| ||||||    
T  34332613 tatcgtctccacaaggaatatcgttcaacttagcaataacataa-tttattagaagtacataaaaataaaaagat-aaagtggttgaagagttttaattg 34332710  T
Q  169 tcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagtt 268  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| | |||||| | |||||| |||| | ||| | |||||||||||||| | |   ||    
T  34332711 tcttgcctaatgcgagattaggttggtttgattcagatgcgtaacaaagattagggtatccttgaatctctcttccttctttgttggaattcatgcgctt 34332810  T
Q  269 agttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatata 329  Q
    | |||  |||||||||| ||||||||||||| | |||||||||  |||||| |||||||||    
T  34332811 aattatcagtttatgacctgtcttttgattt-acaaagtagaa-catgacctcatgatata 34332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 367
Target Start/End: Complemental strand, 21048409 - 21048114
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaa-agatgaaattggttgcagcgttataat 166  Q
    ||||||||| |||||||||||| ||||||||| | |||||| | |||||||||||| |||| ||||| |||| ||||||| | | | |||  ||| ||||    
T  21048409 ttatcgtcttcacaaggattgttgttcaacttggtaattagcggaatttattagaaataaa-agaatttaaagagatgaagtggttggcatggttttaat 21048311  T
Q  167 tgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtag 266  Q
     ||| ||| || | ||||||||||||  | ||||||||| |  ||||  |||||| ||||||||| ||| ||| || ||||||||||| |||||||   |    
T  21048310 cgtcatgcataatgcgagattaggttt-tgtgattcagaagtttaacagcgatta-agaatccttgaattccc-ttccatctttgttgaaattaactcgg 21048214  T
Q  267 ttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaa 366  Q
    ||| ||| ||||| ||||| | ||||| |||||||||||||||||  ||||||| ||||||||  |||| ||||||||||||||||| | | ||||||||    
T  21048213 ttatttattagttgatgacctctctttggatttaagaaagtagaa-catgacccgatgatatataagtgaaagttttattttaatatcgtcgcaattcaa 21048115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 353
Target Start/End: Complemental strand, 10577577 - 10577420
Alignment:
Q  196 ttgattcagatgcgtaacgacgattagagaatccttaaatccccc-tttcatctttgttggaattaacgtagttagttactagtttatgacatgtctttt 294  Q
    |||||| ||| ||||||||||||||||| ||||||| |||||||  |||  |||||| |  |||||| |  |||||||| |||||||| |  ||||||||    
T  10577577 ttgatttagaagcgtaacgacgattagaaaatccttgaatcccctattttgtctttgctcaaattaaagaggttagttattagtttattatgtgtctttt 10577478  T
Q  295 gatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatat 353  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||||| ||| ||||    
T  10577477 gatttaagaaagtagaa-tatgaccctatgataaagcagtggaagttttagtttcatat 10577420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 30797709 - 30797655
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattaga 122  Q
    |||||||||| ||||||||||| |||||||||||||||||  |||||||||||||    
T  30797709 ttatcgtctcaacaaggattgttgttcaacttagcaattaacgaaatttattaga 30797655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 39133832 - 39133925
Alignment:
Q  217 gattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaa 311  Q
    ||||||| ||| ||| ||| ||||||   ||||||||||||||||| | |||  ||||||||||||||| |||||||| ||||||||||||||||    
T  39133832 gattagataattcttgaataccccttctctctttgttggaattaac-tcgttcattactagtttatgacctgtcttttaatttaagaaagtagaa 39133925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 7144226 - 7144169
Alignment:
Q  182 gagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcccc 239  Q
    |||||||||||||||||||| | ||| |||||||||||||| ||||| || |||||||    
T  7144226 gagattaggttggtttgatttaaatgtgtaacgacgattagggaatcattgaatcccc 7144169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 22219812 - 22219761
Alignment:
Q  210 taacgacgattagagaatccttaaatccccctttcatctttgttggaattaa 261  Q
    |||||| |||||| |||||||| |||||||| ||| ||||||||||||||||    
T  22219812 taacgatgattagggaatccttgaatccccccttcgtctttgttggaattaa 22219761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 310
Target Start/End: Complemental strand, 23354645 - 23354528
Alignment:
Q  196 ttgattcagatgcgtaacgacgattagagaatccttaaatccc-cctttcatctttgttggaattaacgtagttagttactagtttatgacatg--tctt 292  Q
    |||||||| | | ||||| |||||||  |||||||| |||||| |||||||||||||||||| ||||| |  ||| ||| |||||||| || ||  ||||    
T  23354645 ttgattcaaaggtgtaacaacgattaatgaatccttgaatccctcctttcatctttgttggagttaacttgtttaattattagtttataacttgtctctt 23354546  T
Q  293 ttgatttaagaaagtaga 310  Q
    | |||||||||| |||||    
T  23354545 tggatttaagaacgtaga 23354528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 9289035 - 9288974
Alignment:
Q  181 cgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctt 242  Q
    |||||||||||| |||||||||  | | |||||||||||||| |||| ||||||| ||||||    
T  9289035 cgagattaggttagtttgattctcacgtgtaacgacgattagggaattcttaaattcccctt 9288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 7023159 - 7023242
Alignment:
Q  151 gttgcagcgttataattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaat 235  Q
    ||||||| |||||| ||||| |||| | | |||||||| ||| ||||||||||||||| ||||| ||| | | ||||||||||||    
T  7023159 gttgcagggttata-ttgtcatgcccaatacgagattatgttagtttgattcagatgcataacggcgagtggggaatccttaaat 7023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 9289148 - 9289120
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaa 96  Q
    |||||||||||||||||||||||||||||    
T  9289148 ttatcgtctccacaaggattgtcgttcaa 9289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 29438559 - 29438451
Alignment:
Q  149 tggttgcagcgttataattgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatct 248  Q
    |||| |||| ||| ||||||||||| | | | ||||||||||||  | |||||  || | |||||| ||||||| |||| ||| |||||||| ||| |||    
T  29438559 tggtagcagggttttaattgtcttgacgaatgcgagattaggtttttgtgattatgaagtgtaacggcgattagggaatacttgaatcccccattcgtct 29438460  T
Q  249 ttgttggaa 257  Q
    |||||||||    
T  29438459 ttgttggaa 29438451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 353
Target Start/End: Complemental strand, 16440585 - 16440304
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataatt 167  Q
    |||||| ||| |||||||| || |||||||| ||||||||| | ||||||||| ||||||||| |||| || |||| ||| ||||||||  ||| | |||    
T  16440585 ttatcgcctctacaaggatcgttgttcaactaagcaattagcggaatttattataagtaaataaaataaaagagat-aaactggttgcaa-gtttttatt 16440488  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagt 267  Q
    |||||| | | |  |||||||||| ||||||||||||||  |||||||| ||||| | |||||| ||||||  || | ||||||||||||||||||| ||    
T  16440487 gtcttgtccaatgtgagattaggtaggtttgattcagatttgtaacgacaattagggtatccttgaatcccttttccgtctttgttggaattaacgtggt 16440388  T
Q  268 tagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatat 353  Q
    |  ||| |||||||||||||||| ||| ||||| ||| |||| | |||||||   ||||||| |||||||||||||| ||| ||||    
T  16440387 tgattattagtttatgacatgtc-tttcatttacgaatgtagga-tatgaccttttgatataacagtggaagttttaattttatat 16440304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 16174399 - 16174465
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaat 134  Q
    ||||||| ||||||  |||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  16174399 ttatcgtgtccacatagattgttgttcaacttagcaattagaagaatttattagaagtaaatagaat 16174465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 12967106 - 12967201
Alignment:
Q  216 cgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaa 311  Q
    |||||||||||||||| ||||||||||   | |||||||||||||||   |||| ||| ||||||||||| |  |||| |||||||||||||||||    
T  12967106 cgattagagaatccttgaatcccccttcattatttgttggaattaactcggttaattattagtttatgacctaactttcgatttaagaaagtagaa 12967201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 12969292 - 12969387
Alignment:
Q  216 cgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaa 311  Q
    |||||||||||||||| ||||||||||   | |||||||||||||||   |||| ||| ||||||||||| |  |||| |||||||||||||||||    
T  12969292 cgattagagaatccttgaatcccccttcattatttgttggaattaactcggttaattattagtttatgacctaactttcgatttaagaaagtagaa 12969387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 12971479 - 12971574
Alignment:
Q  216 cgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaa 311  Q
    |||||||||||||||| |||||||||| | | |||||||||||||||   |||  ||| ||||||||||| |  |||| |||||||||||||||||    
T  12971479 cgattagagaatccttgaatcccccttccttatttgttggaattaactcggttgattattagtttatgacctaactttcgatttaagaaagtagaa 12971574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 26498765 - 26498810
Alignment:
Q  83 ggattgtcgttcaacttagcaattagagaaatttattagaagtaaa 128  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||    
T  26498765 ggattgtcgttcaacttggtaattagaggaatttattagaagtaaa 26498810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 8036935 - 8036863
Alignment:
Q  186 ttaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaat 258  Q
    ||||||||| |||||||| |||| |||| |||||||| ||||  || |||||||| ||| |||||||||||||    
T  8036935 ttaggttggcttgattcaaatgcataacaacgattagggaattattgaatcccccattcttctttgttggaat 8036863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 12960314 - 12960370
Alignment:
Q  72 cgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaa 128  Q
    |||||||| || |||||||||||||||| | |||||||||||||| ||| |||||||    
T  12960314 cgtctccataaagattgtcgttcaacttggtaattagagaaatttcttaaaagtaaa 12960370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 16174460 - 16174520
Alignment:
Q  307 tagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaac 367  Q
    ||||||||||||| | ||||||| |||||||||||||||||  || | |||||||||||||    
T  16174460 tagaattatgacctcgtgatataacagtggaagttttatttgtatctcgccacaattcaac 16174520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 17859108 - 17859163
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccc 238  Q
    |||||||||| || ||||||||||| ||||||| |||||| |||||||| ||||||    
T  17859108 agattaggtttgtgtgattcagatgtgtaacgatgattagggaatccttgaatccc 17859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 15376843 - 15376761
Alignment:
Q  182 gagattaggttggtttgattcagatgcgtaacgacgattagagaatcc-ttaaatccccctttcatctttgttggaattaacg 263  Q
    ||||||||||||||| |||||| |||| ||| | |||||||  ||| | |||||||  || ||||||||||||||||||||||    
T  15376843 gagattaggttggttcgattcaaatgcataatggcgattaggaaatacattaaatctgcccttcatctttgttggaattaacg 15376761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 73 - 367
Target Start/End: Complemental strand, 26419991 - 26419696
Alignment:
Q  73 gtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatag-aatataaaagatgaaattggttgcagcgttataattgtct 171  Q
    |||||||||| || ||| ||||||||||||||||   | |||||||||||||||||||| |||| ||||||||||  |||||| || ||| |||||||      
T  26419991 gtctccacaaagactgttgttcaacttagcaattgacggaatttattagaagtaaatagaaatagaaaagatgaacgtggttgtagtgttttaattgttc 26419892  T
Q  172 tgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagt 271  Q
      || | | |||||||| |||| ||  ||||||||| ||||   |||| || |||||||| |||||| ||||  ||||||||||||||||||    || |    
T  26419891 gacccaatgcgagattatgttgtttctattcagatgtgtaatagcgatcagggaatccttgaatccctcttttgtctttgttggaattaacgcgaataat 26419792  T
Q  272 tactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaac 367  Q
     | ||||| ||||| | |||||||||| |||| |||   || |||||| |||||||||| ||||||||||||||||  ||||  ||||||||||||    
T  26419791 cattagttgatgacctatcttttgattcaagagagttagatcatgaccacatgatatagaagtggaagttttatttatatatcaccacaattcaac 26419696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 2728509 - 2728554
Alignment:
Q  74 tctccacaaggattgtcgttcaacttagcaattagagaaatttatt 119  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||    
T  2728509 tctccacaaggattgtcgttcaacttagtaattagaaaaaattatt 2728554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 25189386 - 25189338
Alignment:
Q  71 tcgtctccacaaggattgtcgttcaacttagcaattagagaaatttatt 119  Q
    |||||||||||  ||||||||||||||||||||||||  ||||||||||    
T  25189386 tcgtctccacagagattgtcgttcaacttagcaattaacgaaatttatt 25189338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 8401387 - 8401422
Alignment:
Q  181 cgagattaggttggtttgattcagatgcgtaacgac 216  Q
    |||||||| |||||||||||||||||||||||||||    
T  8401387 cgagattaagttggtttgattcagatgcgtaacgac 8401422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 8713981 - 8714055
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaa 257  Q
    |||||||||| | |||||||||| |  |||| |||||||| |||||||| ||||||   ||||||||||||||||    
T  8713981 agattaggtttggttgattcagaagattaacaacgattagggaatccttgaatcccatcttcatctttgttggaa 8714055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 9065868 - 9065942
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaa 257  Q
    |||||||||| | |||||||||| |  |||| |||||||| |||||||| ||||||   ||||||||||||||||    
T  9065868 agattaggtttggttgattcagaagattaacaacgattagggaatccttgaatcccatcttcatctttgttggaa 9065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 10343007 - 10342973
Alignment:
Q  74 tctccacaaggattgtcgttcaacttagcaattag 108  Q
    ||||||||||||||| |||||||||||||||||||    
T  10343007 tctccacaaggattgccgttcaacttagcaattag 10342973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 28205156 - 28205210
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattaga 122  Q
    |||||||||| |||| |||| |||||||||| ||||||||  |||||||||||||    
T  28205156 ttatcgtctctacaaagattttcgttcaactaagcaattaatgaaatttattaga 28205210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 2728625 - 2728677
Alignment:
Q  210 taacgacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||||||||  |||||||| |||| ||||||| ||||||||| |||||||    
T  2728625 taacgacgattaaggaatccttgaatctccctttcgtctttgttgaaattaac 2728677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 237
Target Start/End: Original strand, 24926703 - 24926873
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaa-tataaaagatgaaattggttgcagcgttataat 166  Q
    |||| |||||||||| ||||||| |||||||  | |||||| |||| ||||| ||||||||||||| || |||| |||||| ||||||||| ||| ||||    
T  24926703 ttattgtctccacaaagattgtcattcaactccgaaattagcgaaacttatttgaagtaaatagaaatagaaaacatgaaagtggttgcagggttttaat 24926802  T
Q  167 tgtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcc 237  Q
    |||| |||| | | | ||||||||||||| ||||||||||| |||| | ||||||| |||||||| |||||    
T  24926803 tgtcctgcccaatacaagattaggttggtgtgattcagatgtgtaatggcgattagggaatccttgaatcc 24926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 194 - 344
Target Start/End: Original strand, 35134612 - 35134762
Alignment:
Q  194 gtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttt 293  Q
    |||||||||||| | |||||||| |||  |||||| || |||| ||||| ||| ||| ||| ||||||||| |||| | | |||||||||||||||||||    
T  35134612 gtttgattcagacgtgtaacgacaatttaagaatcgttgaatctcccttccatttttattgaaattaacgttgttaatcattagtttatgacatgtcttt 35134711  T
Q  294 tgatttaagaaagtagaattatgaccccatgatatagcagtggaagtttta 344  Q
    ||||||||||||||| |||||||||    ||||||| ||||||| ||||||    
T  35134712 tgatttaagaaagtaaaattatgacgttgtgatataacagtggaggtttta 35134762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 217 - 373
Target Start/End: Original strand, 6887243 - 6887398
Alignment:
Q  217 gattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaattatg 316  Q
    |||||| ||||||||||||||| | | |||| |||||||||| |||    ||  ||| |||||||||| |||| ||| ||||||||||| |||||| |||    
T  6887243 gattagggaatccttaaatccctcatccatcattgttggaatcaactcgattgattattagtttatgaaatgtgtttcgatttaagaaactagaat-atg 6887341  T
Q  317 accccatgatatagcagtggaagttttattttaatattgccacaattcaaccggtta 373  Q
    ||||| |||| ||  ||||||||||||||||||||||| ||||||||||||| ||||    
T  6887342 accccgtgatgtattagtggaagttttattttaatatttccacaattcaaccagtta 6887398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 14185557 - 14185478
Alignment:
Q  182 gagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    |||||||||| ||||||||||| ||| |||||||||||||| ||||||||  ||||||||||  |||||||||||||||||    
T  14185557 gagattaggtcggtttgattcaaatgtgtaacgacgattagcgaatccttctatcccccttt-gtctttgttggaattaac 14185478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 374
Target Start/End: Original strand, 28259433 - 28259735
Alignment:
Q  71 tcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattgg---ttgcagcgttataatt 167  Q
    |||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||| || | ||||| |  || | |||   ||  ||  || |||||    
T  28259433 tcgtcttcacaaggattgtcgttcaacttagcaataagaggaatatattagaagtaaa-agcaaataaagg--gataatggggtttttagaattttaatt 28259529  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcccc-ctttcatctttgttggaattaacgtag 266  Q
    ||  || ||| | |||||||| |||| | |||||||||    |||||  ||||||||||||||| ||||||| || |  |||||||||||||| | |  |    
T  28259530 gttatgtctaatgcgagattatgttgttatgattcagaattataacggtgattagagaatccttgaatcccctctcttttctttgttggaattcatgcgg 28259629  T
Q  267 ttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaa 366  Q
     || |||||||||||||||  ||| || ||||||| ||||||| | ||||||||| |||| ||||| ||||||||||| ||| |||| ||| ||||| ||    
T  28259630 ctaattactagtttatgaccagtc-ttggatttaaaaaagtagga-tatgaccccgtgatgtagcaatggaagttttaattttatatcgccgcaatttaa 28259727  T
Q  367 ccggttat 374  Q
    || |||||    
T  28259728 ccagttat 28259735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 312
Target Start/End: Complemental strand, 14140258 - 14140015
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataatt 167  Q
    ||||| |||||||| ||||||||||| ||||||| ||||||   |||||||||||||||||||||| | || |||| ||| ||||||||  |||  |  |    
T  14140258 ttatcatctccacatggattgtcgttgaacttagaaattagcagaatttattagaagtaaatagaagaaaagagat-aaaatggttgcaaagtttcagct 14140160  T
Q  168 gtcttgcctagttcgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagt 267  Q
    | | |||| |    ||||||||||||||||||||||||| |||||| | |||||    ||| || | |||||||  | || || |||||||||| |  ||    
T  14140159 gccctgcccaacgtgagattaggttggtttgattcagatacgtaacaaagattaagctatcttttattccccctaccttcatttttggaattaatgcggt 14140060  T
Q  268 tagttactagtttatgacatgtcttttgatttaagaaagtagaat 312  Q
    || ||| ||||||||||| | |||||| || || |||||||||||    
T  14140059 taattattagtttatgacctatcttttaatatacgaaagtagaat 14140015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 6887104 - 6887159
Alignment:
Q  68 ttatcgtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaa 123  Q
    |||||||||||||||||||||||||||||||| | |||||| | ||||||||||||    
T  6887104 ttatcgtctccacaaggattgtcgttcaacttggtaattagcggaatttattagaa 6887159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 28075661 - 28075537
Alignment:
Q  83 ggattgtcgttcaacttagcaattagagaaatttattagaagtaaatagaatataaaagatgaaattggttgcagcgttataattgtcttgcctagttcg 182  Q
    |||||||  |||||||||||||||||   |||||||||| | ||||||||||  ||||| |||||||| ||| || ||| |||||||  |||| | | ||    
T  28075661 ggattgttattcaacttagcaattagcagaatttattagcaataaatagaatggaaaaggtgaaattgcttgtag-gttttaattgttatgcccaatgcg 28075563  T
Q  183 agattaggt-tggtttgattcagatg 207  Q
    ||||||||| ||||||||||||||||    
T  28075562 agattaggtgtggtttgattcagatg 28075537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 353
Target Start/End: Complemental strand, 28075527 - 28075449
Alignment:
Q  275 tagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatat 353  Q
    ||||||||||| || ||||||||||||||||||| | ||||||||   ||||  ||||| ||||||||||||| |||||    
T  28075527 tagtttatgacctgacttttgatttaagaaagtaaagttatgaccttgtgatgcagcagaggaagttttatttgaatat 28075449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 35134494 - 35134551
Alignment:
Q  73 gtctccacaaggattgtcgttcaacttagcaattagagaaatttattagaagtaaata 130  Q
    ||||||| ||||||||||||| ||||| | ||||||  ||||||||||||||||||||    
T  35134494 gtctccataaggattgtcgtttaacttggtaattagcaaaatttattagaagtaaata 35134551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 11307834 - 11307878
Alignment:
Q  217 gattagagaatccttaaatccccctttcatctttgttggaattaa 261  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  11307834 gattagagaatccttaaatctccccttcgtctttgttggaattaa 11307878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 16048686 - 16048721
Alignment:
Q  84 gattgtcgttcaacttagcaattagagaaatttatt 119  Q
    |||||||||||||||||||||||||| |||||||||    
T  16048686 gattgtcgttcaacttagcaattagaaaaatttatt 16048721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 267
Target Start/End: Original strand, 16048798 - 16048868
Alignment:
Q  197 tgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagt 267  Q
    ||||||||| | |||||| ||||||| ||| |||| |||||||| || | |||||||||||||||| ||||    
T  16048798 tgattcagaggtgtaacggcgattagggaaaccttgaatcccccctttacctttgttggaattaacttagt 16048868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 13581982 - 13582038
Alignment:
Q  181 cgagattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatcc 237  Q
    ||||||||||||  | ||||||||| | ||||||||| ||||||||||||| |||||    
T  13581982 cgagattaggttattgtgattcagaagtgtaacgacgtttagagaatccttgaatcc 13582038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 366
Target Start/End: Complemental strand, 17318 - 17177
Alignment:
Q  224 gaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttatgacatgtcttttgatttaagaaagtagaattatgaccccat 323  Q
    |||||||| |||| ||||| | |||||  |||||||||| | |||  ||| |||| |||||  ||||||| |||||||||||||||||| |||||||| |    
T  17318 gaatccttgaatctcccttccgtctttcgtggaattaacttggttgattattagtgtatgaattgtctttagatttaagaaagtagaat-atgaccccgt 17220  T
Q  324 gatatagcagtggaagttttattttaatattgccacaattcaa 366  Q
    ||| || ||||||||||||||||||||||| ||| ||||||||    
T  17219 gatgtatcagtggaagttttattttaatatcgcctcaattcaa 17177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 7e-16; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Complemental strand, 25397413 - 25397314
Alignment:
Q  275 tagtttatgacatgtcttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatattgccacaattcaaccggttat 374  Q
    |||||||||||||||||||| | |||| |||||||| |||||||| | | ||||||| ||| |||||||||||| ||||  || |||||||||| |||||    
T  25397413 tagtttatgacatgtcttttaaattaaaaaagtagagttatgacctcgttatatagcggtgaaagttttatttttatatcaccgcaattcaaccagttat 25397314  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 19593163 - 19593096
Alignment:
Q  187 taggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttg 254  Q
    ||||||||||||||||||||| ||||| ||||||||  ||| ||| |||||||| ||| |||||||||    
T  19593163 taggttggtttgattcagatgtgtaacaacgattaggaaattcttgaatcccccattcgtctttgttg 19593096  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 20518298 - 20518372
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaa 257  Q
    |||||||||| |  ||||||| | | |||||||||||||  |||||||| |||||||| |||||||||| |||||    
T  20518298 agattaggtttggatgattcataagtgtaacgacgattatggaatccttgaatccccccttcatctttgctggaa 20518372  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 353
Target Start/End: Complemental strand, 24438444 - 24438383
Alignment:
Q  291 ttttgatttaagaaagtagaattatgaccccatgatatagcagtggaagttttattttaatat 353  Q
    ||||||| || ||||||||||| |||||||| |||||||| | ||||||||||||||| ||||    
T  24438444 ttttgatctacgaaagtagaat-atgaccccgtgatatagtattggaagttttatttttatat 24438383  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 19541684 - 19541558
Alignment:
Q  183 agattaggttggtttgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaacgtagttagttactagtttat 282  Q
    |||||||||| ||| ||||||||   |||| ||| ||||| |||||||| ||||  | || ||| ||| ||||| ||||| | |||| ||| ||||||||    
T  19541684 agattaggtttgtt-gattcagaaatgtaatgacaattagggaatccttgaatcttctttccatattttttggagttaacttggttaattattagtttat 19541586  T
Q  283 gacatg--tcttttgatttaagaaagta 308  Q
    ||||||  ||||| ||||||||||||||    
T  19541585 gacatgtctctttggatttaagaaagta 19541558  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 7236 - 7171
Alignment:
Q  197 tgattcagatgcgtaacgacgattagagaatccttaaatccccctttcatctttgttggaattaac 262  Q
    ||||||| |||  |||| ||||||||||||||||  |||||||| |||||| ||||||||||||||    
T  7236 tgattcaaatgattaacaacgattagagaatcctcgaatccccccttcatcattgttggaattaac 7171  T

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