View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20977_high_6 (Length: 404)

Name: NF20977_high_6
Description: NF20977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20977_high_6
NF20977_high_6
[»] chr3 (4 HSPs)
chr3 (1-388)||(50751770-50752157)
chr3 (26-114)||(11870592-11870680)
chr3 (192-333)||(11870808-11870949)
chr3 (62-128)||(11870692-11870758)
[»] chr2 (3 HSPs)
chr2 (64-262)||(512725-512928)
chr2 (189-262)||(564208-564281)
chr2 (126-206)||(564293-564373)
[»] chr8 (4 HSPs)
chr8 (26-155)||(43798012-43798146)
chr8 (145-333)||(38201693-38201881)
chr8 (196-331)||(43797842-43797977)
chr8 (179-240)||(10341397-10341458)
[»] chr1 (2 HSPs)
chr1 (104-331)||(8655212-8655444)
chr1 (28-72)||(8655166-8655210)
[»] chr4 (5 HSPs)
chr4 (13-235)||(55236630-55236857)
chr4 (13-210)||(14311792-14311994)
chr4 (129-322)||(14293721-14293914)
chr4 (129-322)||(14309770-14309963)
chr4 (141-231)||(9789966-9790056)
[»] chr7 (2 HSPs)
chr7 (13-252)||(45715358-45715602)
chr7 (129-245)||(38580255-38580371)
[»] chr5 (1 HSPs)
chr5 (189-262)||(27333453-27333526)
[»] chr6 (1 HSPs)
chr6 (178-240)||(32209313-32209375)


Alignment Details
Target: chr3 (Bit Score: 376; Significance: 0; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 1 - 388
Target Start/End: Complemental strand, 50752157 - 50751770
Alignment:
Q  1 ggtgtttacttgtcaggtttctcatgttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaat 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50752157 ggtgtttacttgtcaggtttttcatgttatattcacaattcctcagatattctcccaaccaagttacttgctatttatcagggtcttttgttagctaaat 50752058  T
Q  101 ctatggatattaatgagctcatttgctaattccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50752057 ctatggatattaatgagctcatttgctaattccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaa 50751958  T
Q  201 acataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaaaactttatc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50751957 acataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttgaaactttatc 50751858  T
Q  301 gaatgtggatctcctcatccattcttcttctccaaatgttattagaacatataggaatcctataagagattcacatgatcacatacat 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50751857 gaatgtggatctcctcatccattcttcttctccaaatgttattagaacatataggaatcctataagagattcacatgatcacatacat 50751770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 11870592 - 11870680
Alignment:
Q  26 gttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaatctatggatattaat 114  Q
    |||||||||| ||||| ||||||||||||| ||   |||||||| ||||||||||||  ||||||||||||||| || | |||||||||    
T  11870592 gttatattcataattcttcagatattctccaagtggagttactttctatttatcaggaccttttgttagctaaaactcttgatattaat 11870680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 11870808 - 11870949
Alignment:
Q  192 tgattcaaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaa 291  Q
    |||||||| | ||| | ||||||||| || |||||| ||||| ||||| ||||| ||||  |||||  || ||||||  | ||||||  |||||||||      
T  11870808 tgattcaagagatacatgatttgatcgagaaaagcattatcactattttccacattctttgtgaagaaaacaagtgtgcagattttattatcaaacttgg 11870907  T
Q  292 aactttatcgaatgtggatctcctcatccattcttcttctcc 333  Q
    |  |||||||||||||||||||||||||| ||||||| ||||    
T  11870908 agttttatcgaatgtggatctcctcatcccttcttctcctcc 11870949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 11870692 - 11870758
Alignment:
Q  62 agttacttgctatttatcagggtcttttgttagctaaatctatggatattaatgagctcatttgcta 128  Q
    |||||||| ||||||||||||  ||||||||||||||| || | ||||||||||| ||| |||||||    
T  11870692 agttactttctatttatcaggaccttttgttagctaaaactcttgatattaatgatctcgtttgcta 11870758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 262
Target Start/End: Original strand, 512725 - 512928
Alignment:
Q  64 ttacttgctatttatcagggtcttttgttagctaaatctatggatattaatgagctcatttg-----ctaattccttgcatagtataaatctcataaaag 158  Q
    |||||| |||| ||| |||||||||||||||||||| | ||||||||| |||||||  |||      |||| ||||| ||||||||||||||||| ||||    
T  512725 ttactttctatctattagggtcttttgttagctaaaacgatggatattgatgagctggttttttattctaactccttacatagtataaatctcattaaag 512824  T
Q  159 gtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagg 258  Q
    ||| | ||||||||||||| || |||| | ||||||||||| |||||||||| |||||| ||||||| ||||||| ||||| | |||| |||||||||||    
T  512825 gtccacccatgaagtaccatgtccatgttgttttgattcaagacataaaagagttgatcgagcaaagtaatatcactatttactacacacttcatgaagg 512924  T
Q  259 gaat 262  Q
    ||||    
T  512925 gaat 512928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Complemental strand, 564281 - 564208
Alignment:
Q  189 ttttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaat 262  Q
    ||||||||||| |||||||||| |||||| ||||||| ||||||| ||||| | |||| |||||||||||||||    
T  564281 ttttgattcaagacataaaagagttgatcgagcaaagtaatatcactatttactacacacttcatgaagggaat 564208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 564373 - 564293
Alignment:
Q  126 ctaattccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataa 206  Q
    |||| ||||| ||||||||||||||||| ||||||| | ||||||||||||| || |||| | ||||||||||| ||||||    
T  564373 ctaactccttacatagtataaatctcattaaaggtccacccatgaagtaccatgtccatgttgttttgattcaagacataa 564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 43798146 - 43798012
Alignment:
Q  26 gttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaatctatggatattaatgagctcatttg 125  Q
    |||||||||||||||  ||| ||||||||| |||  ||||| |||||||||||||||||||| ||||||||||| || |||||||||| ||||||| |||    
T  43798146 gttatattcacaatttttcaaatattctccaagctgagttaattgctatttatcagggtcttctgttagctaaaactctggatattaacgagctcaattg 43798047  T
Q  126 -----ctaattccttgcatagtataaatctcataa 155  Q
         || ||||||| | |||||||||||||||||    
T  43798046 ttattctgattccttacgtagtataaatctcataa 43798012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 333
Target Start/End: Complemental strand, 38201881 - 38201693
Alignment:
Q  145 aaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttgccac 244  Q
    ||||||||||||||||  |||||| ||||  || ||||| | | ||||||||||| |||||||  | |||||| |||||| ||||||||  |||||||||    
T  38201881 aaatctcataaaaggttcatccataaagtttcatgttcacgatgttttgattcaagacataaagaaattgatcgagcaaaacaatatcaccatttgccac 38201782  T
Q  245 actcttcatgaagggaataagtgtataaattttaagatcaaacttaaaactttatcgaatgtggatctcctcatccattcttcttctcc 333  Q
    |||||||   |||||||| | |||  | |  ||    |||||||||||||||||||| || | ||||||||| ||||| ||||| ||||    
T  38201781 actcttcgaaaagggaatcaatgtgcacaccttttattcaaacttaaaactttatcggatattgatctcctcgtccatccttctcctcc 38201693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 331
Target Start/End: Complemental strand, 43797977 - 43797842
Alignment:
Q  196 tcaaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaaaact 295  Q
    |||| ||||||||| ||||||  |||||| |||||||| ||||||||||||| ||   ||||  || ||||||    ||||||    ||||||| || ||    
T  43797977 tcaagacataaaaggtttgattgagcaaaacaatatcactatttgccacactttttgggaagaaaacaagtgtgcggattttataggcaaacttgaagct 43797878  T
Q  296 ttatcgaatgtggatctcctcatccattcttcttct 331  Q
    |||| ||||||||||||||| |||||||||||||||    
T  43797877 ttattgaatgtggatctccttatccattcttcttct 43797842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 10341458 - 10341397
Alignment:
Q  179 gttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttg 240  Q
    |||||||||||||||||||||  ||||||||| ||||||  ||||| |||| ||| ||||||    
T  10341458 gttcatgctattttgattcaaggcataaaagaattgatcgggcaaaacaatgtcactatttg 10341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 331
Target Start/End: Original strand, 8655212 - 8655444
Alignment:
Q  104 tggatattaatgagctcatttgcta-----attccttgcatagtataaatctcataaaag--gtcaatccatgaagtaccacgttcatgctattttgatt 196  Q
    ||||||||||||||||| |||||||     ||||||| |||| ||||||||||||||||   ||| ||  ||||||||||| ||||||||| ||||||||    
T  8655212 tggatattaatgagctcgtttgctattctgattccttacatattataaatctcataaaaaaagtccatttatgaagtaccatgttcatgctgttttgatt 8655311  T
Q  197 caaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaaaactt 296  Q
     || | |||||| |||||||| ||||||  ||||||| ||||| ||||||| |||  |||||||| ||| ||  | |||||| || || ||||||| ||     
T  8655312 aaagatataaaaaatttgatcgagcaaa-taatatcactattttccacactattcgagaagggaacaagagtgcatattttatgaccatacttaaagctc 8655410  T
Q  297 tatcgaatgtggatctcctcatccattcttcttct 331  Q
    |||| ||||||| ||| || ||||| |||||||||    
T  8655411 tatcaaatgtggttcttcttatcca-tcttcttct 8655444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 8655166 - 8655210
Alignment:
Q  28 tatattcacaattcctcagatattctcccagccaagttacttgct 72  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||    
T  8655166 tatattcacaattctttagatattctccaagccgagttacttgct 8655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 55236857 - 55236630
Alignment:
Q  13 tcaggtttctcatgttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaatctatggatatta 112  Q
    ||||| || ||| |||||||| |||||||||| |||||||| | ||   |||||||||| ||||||||||| || ||| |||| ||||| ||| | |||     
T  55236857 tcaggattttcaggttatatttacaattcctctgatattcttcaagttgagttacttgccatttatcagggcctcttgctagccaaatcgatgaacattg 55236758  T
Q  113 atgagctcatttgcta-----attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaa 207  Q
    |||  ||  |||||||     ||||||| ||| |||||||||||||||||||||   | ||||| ||||| ||||||||| | ||||||||| |||||||    
T  55236757 atgcacttgtttgctactctgattccttacatggtataaatctcataaaaggtcctcctatgaaataccatgttcatgctgtgttgattcaagacataaa 55236658  T
Q  208 agatttgatctagcaaagcaatatcatt 235  Q
    ||| ||  | ||||| | ||||||||||    
T  55236657 agacttactatagcacaacaatatcatt 55236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 210
Target Start/End: Original strand, 14311792 - 14311994
Alignment:
Q  13 tcaggtttctcatgttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaatctatggatatta 112  Q
    ||||| || ||| |||||||||| |||||||| |||||||||| ||   |||||||||| ||||| ||||| || ||| |||| ||||| ||| | |||     
T  14311792 tcaggattttcaggttatattcataattcctctgatattctccaagttgagttacttgccatttaccagggcctcttgctagccaaatcgatgaacattg 14311891  T
Q  113 atgagctcatttgcta-----attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaa 207  Q
    ||| | |  |||||||     ||||||| ||| |||||||||||||||||||||   | ||||| ||||| ||||||| | | ||||||||| |||||||    
T  14311892 atgcgattgtttgctactcttattccttacatggtataaatctcataaaaggtcttcctatgaaataccatgttcatgttgtgttgattcaagacataaa 14311991  T
Q  208 aga 210  Q
    |||    
T  14311992 aga 14311994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 14293721 - 14293914
Alignment:
Q  129 attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaa 228  Q
    ||||||| ||| |||||||||||||||||||||   | ||||| ||||| ||||||| | | ||||||||| |||||||||| ||  |  |||||| |||    
T  14293721 attccttacatggtataaatctcataaaaggtcctcctatgaaataccatgttcatgttgtgttgattcaagacataaaagacttactagagcaaaacaa 14293820  T
Q  229 tatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaaaactttatcgaatgtggatctcctcatccat 322  Q
    ||| ||| |||| ||||| ||||  ||||| ||  | |||  | |||||| | |||| |||  | |||||||||||||||| ||||||||||||    
T  14293821 tattattgtttgtcacacccttcgggaaggaaaccaatgtgcagattttatggtcaagcttggatctttatcgaatgtggacctcctcatccat 14293914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 14309770 - 14309963
Alignment:
Q  129 attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaa 228  Q
    ||||||| ||| |||||||||||||||||||||   | ||||| ||||| ||||||| | | ||||||||| |||||||||| ||  |  |||||| |||    
T  14309770 attccttacatggtataaatctcataaaaggtcctcctatgaaataccatgttcatgttgtgttgattcaagacataaaagacttactagagcaaaacaa 14309869  T
Q  229 tatcattatttgccacactcttcatgaagggaataagtgtataaattttaagatcaaacttaaaactttatcgaatgtggatctcctcatccat 322  Q
    ||| ||| |||| ||||| ||||  ||||| ||  | |||  | |||||| | |||| |||  | |||||||||||||||| ||||||||||||    
T  14309870 tattattgtttgtcacacccttcgggaaggaaaccaatgtgcagattttatggtcaagcttggatctttatcgaatgtggacctcctcatccat 14309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 9789966 - 9790056
Alignment:
Q  141 gtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaatat 231  Q
    ||||| ||||||||||||||  | ||||||| |  || ||||||||  ||||||||||| ||||||||||||||||| |||||| ||||||    
T  9789966 gtatagatctcataaaaggtacacccatgaaatttcatgttcatgcagttttgattcaagacataaaagatttgatcgagcaaaacaatat 9790056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 45715602 - 45715358
Alignment:
Q  13 tcaggtttctcatgttatattcacaattcctcagatattctcccagccaagttacttgctatttatcagggtcttttgttagctaaatctatggatatta 112  Q
    ||||| || ||| |||||||||||||||||||  ||||||||| |||  |||||||||  ||||| ||||  ||  || |||| ||||| ||| | |||     
T  45715602 tcaggattttcaggttatattcacaattcctcttatattctccaagctgagttacttgacatttaccaggacctcatgctagcaaaatcgatgaacattg 45715503  T
Q  113 atgagctcatttgcta-----attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaa 207  Q
    |||||||  |||||||     ||||||| ||| |||||||||||||||||||||   | ||||| || || ||||||| | | ||||||||| |||||||    
T  45715502 atgagcttgtttgctactttgattccttacatggtataaatctcataaaaggtcctcctatgaaatatcatgttcatgatgtattgattcaagacataaa 45715403  T
Q  208 agatttgatctagcaaagcaatatcattatttgccacactcttca 252  Q
    ||| ||  |  || ||| |||||||||| || | |||||||||||    
T  45715402 agacttagtagaggaaaacaatatcattgttcgtcacactcttca 45715358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 38580255 - 38580371
Alignment:
Q  129 attccttgcatagtataaatctcataaaaggtcaatccatgaagtaccacgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaa 228  Q
    ||||||| ||| ||||||||||||||||||  |   |||| || ||||| ||||||| | ||||||||||| |||| |||||||| ||  |||||| |||    
T  38580255 attccttacatggtataaatctcataaaagaccctcccataaaataccatgttcatgttgttttgattcaagacatgaaagatttaatagagcaaaacaa 38580354  T
Q  229 tatcattatttgccaca 245  Q
    ||||| |||||| ||||    
T  38580355 tatcactatttgtcaca 38580371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 27333453 - 27333526
Alignment:
Q  189 ttttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttgccacactcttcatgaagggaat 262  Q
    ||||||||||| ||| ||||||    ||| |||||||||||||||||||||||||||||||||  |||||||||    
T  27333453 ttttgattcaagacaaaaaagaaacaatcgagcaaagcaatatcattatttgccacactcttcgagaagggaat 27333526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 32209375 - 32209313
Alignment:
Q  178 cgttcatgctattttgattcaaaacataaaagatttgatctagcaaagcaatatcattatttg 240  Q
    |||||||| | ||||||||||| ||||||||||| ||||| |||||| |||||||| ||||||    
T  32209375 cgttcatgttgttttgattcaagacataaaagatatgatcgagcaaaacaatatcactatttg 32209313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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