View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20978_low_19 (Length: 228)
Name: NF20978_low_19
Description: NF20978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20978_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 2252051 - 2251960
Alignment:
| Q |
38 |
caaatgtggtattttataccgtataattaaatttaacagacccgaaattatccttatacagtatatgattcatccttccaagtttattatcc |
129 |
Q |
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| T |
2252051 |
caaatgtggtattttataccgtataattaaatttaacagacccgaaattatccttatagagtatatgattcatccttccaagtttattatcc |
2251960 |
T |
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