View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20979_high_11 (Length: 239)
Name: NF20979_high_11
Description: NF20979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20979_high_11 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 8036168 - 8035946
Alignment:
| Q |
1 |
tatctctaatattaatttcatcttattcctattgagccctatctaatattttgtttctaattctctatcttattcgtaccattaaaaatgggtctgtatg |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8036168 |
tatctctaatattaatttcatcttattcctattgagccctatgtaatattttgtttctaattctctatcttattcgtaccattaaaaatgggtctgtatg |
8036069 |
T |
|
| Q |
101 |
tggtaatccatcagtacttgattagtaaatggttagctaacagctagcatcttttgttcatactaatttcataaagctcttgtagtcatcagctataaat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
8036068 |
tggtaatccatcagtacttgattagtaaatggttagctaacagctagcatcttttgttcatactaatttcataaagctcttgtagtcatcagctataaat |
8035969 |
T |
|
| Q |
201 |
accaactcatcttgcttctcatt |
223 |
Q |
| |
|
||||||||||| ||||||||||| |
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|
| T |
8035968 |
accaactcatcgtgcttctcatt |
8035946 |
T |
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