View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2097_high_47 (Length: 252)
Name: NF2097_high_47
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2097_high_47 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 3879189 - 3878958
Alignment:
| Q |
17 |
cattcaaaattgaaaatatgcatctttacaattacattgaactactccctaagaagaagttcgggttatttgcatttccatttccattgatgagagcaag |
116 |
Q |
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| T |
3879189 |
cattcaaaattgaaaatatgcatctttacaattacattgaactactccctaagaagaagttcgggttatttgcatttccatttccattgatgagagcaag |
3879090 |
T |
|
| Q |
117 |
caaaattggatcaacttgttcagcaacatttccaaggtgatcattattgtacaatctcggagaaatcaaatgagcagctggaggtggcatcatattgtta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3879089 |
caaaattggatcaacttgttcagcaacatttccaaggtgatcattaatgtacaatctcggagaaatcaaatgagcagctggaggtggcatcatattgtta |
3878990 |
T |
|
| Q |
217 |
aagctggagctaggttgaaattgatgatgtcc |
248 |
Q |
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||||||||||||||||||||||| ||| |||| |
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| T |
3878989 |
aagctggagctaggttgaaattgttgaggtcc |
3878958 |
T |
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