View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2097_high_49 (Length: 250)
Name: NF2097_high_49
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2097_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 44468047 - 44468289
Alignment:
| Q |
1 |
cactgtctaaatatgatccagaaagaatggatgatgaagttatggtttgaaggggtagggatgatgtgtatgcatatttttgatgaaaatgagagctgta |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44468047 |
cactatctaaatatgatccagaaagaatggatgatgaagttatggtttgaaggggtagggatgatgtgtatgcatatttttgatgaaaatgagagctgta |
44468146 |
T |
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| Q |
101 |
aggtgtctctattaatgtgtggatctgttgttgggtatggaaagactgagtaaaagtggagagaggacaaatgttgggatgaggttattttcagaagtga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44468147 |
aggtgtctctattaatgtgtggatctgttgttgggtatggaaagactgagtaaaagtggagagaggacaaatgttgggatgaggttattttcaaaagtga |
44468246 |
T |
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| Q |
201 |
ttctgttagagactcctaagttttagggttgccatattcttcg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
44468247 |
ttctgttagagactcctaagttttagggttgccatatgcttcg |
44468289 |
T |
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