View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2097_high_67 (Length: 228)
Name: NF2097_high_67
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2097_high_67 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 9905012 - 9904806
Alignment:
| Q |
1 |
acaactaacgggcttacgaagaacatgaaagaacacacattcttcaactgccgccagtcggacatggatattgagatacaacgaggacgattcgacaaca |
100 |
Q |
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| T |
9905012 |
acaactaacgggcttacgaagaacatgaaagaacacacattcttcaactgccgccagtcgaacatggatattgagatacaacgaggacgattcgacgaca |
9904913 |
T |
|
| Q |
101 |
cttacaaaaacatgactcgacggcacgtgtctttcacactaatacaacaccaaaacttaatccttgatacataccgttaaattaacgaactgttttaagc |
200 |
Q |
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| T |
9904912 |
cttacaaaaacatgactcgacggcacgtgtctttcacactaatacaacaccaaaacttaatccttgatacataccgttaaattaacgaactgttttaagc |
9904813 |
T |
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| Q |
201 |
ttcacat |
207 |
Q |
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||||||| |
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| T |
9904812 |
ttcacat |
9904806 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32669284 - 32669204
Alignment:
| Q |
1 |
acaactaacgggcttacgaagaacatgaaagaacacacattcttcaactgccgccagtcggacatggatattgagatacaac |
82 |
Q |
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||||||||| |||||| |||||| |||||| |||||||| |||||||| || | ||| |||||| ||||||||||||||||| |
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| T |
32669284 |
acaactaaccggcttatgaagaaaatgaaa-aacacacaatcttcaaccgcagtcagccggacagggatattgagatacaac |
32669204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23701936 - 23702017
Alignment:
| Q |
1 |
acaactaacgggcttacgaagaacatgaaagaacacacattcttcaactgccgccagtcggacatggatattgagatacaac |
82 |
Q |
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||||||||| |||||| |||||||||||| ||||||||||||||| | || |||| |||||| |||| | |||||||||| |
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| T |
23701936 |
acaactaacacgcttacaaagaacatgaaaaaacacacattcttcatccgcaaccagccggacaaggatctagagatacaac |
23702017 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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