View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2097_low_18 (Length: 361)

Name: NF2097_low_18
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2097_low_18
NF2097_low_18
[»] chr4 (13 HSPs)
chr4 (91-347)||(39331177-39331432)
chr4 (6-73)||(39331419-39331488)
chr4 (295-344)||(7616968-7617017)
chr4 (273-342)||(12922186-12922255)
chr4 (302-343)||(25855282-25855323)
chr4 (273-345)||(13834523-13834595)
chr4 (251-347)||(42375245-42375341)
chr4 (305-344)||(32934155-32934194)
chr4 (305-347)||(22467250-22467292)
chr4 (296-345)||(21241804-21241853)
chr4 (248-328)||(24806760-24806840)
chr4 (253-326)||(26499279-26499352)
chr4 (295-343)||(51226123-51226171)
[»] chr7 (12 HSPs)
chr7 (297-344)||(8929495-8929542)
chr7 (295-347)||(23441495-23441547)
chr7 (263-344)||(12849733-12849814)
chr7 (295-344)||(23457830-23457879)
chr7 (295-347)||(23474549-23474601)
chr7 (251-331)||(39608609-39608689)
chr7 (261-344)||(8062885-8062968)
chr7 (305-344)||(46720032-46720071)
chr7 (314-343)||(29197172-29197201)
chr7 (295-347)||(23532887-23532939)
chr7 (305-337)||(30793161-30793193)
chr7 (301-341)||(43576486-43576526)
[»] chr3 (8 HSPs)
chr3 (305-347)||(47944561-47944603)
chr3 (295-344)||(45681402-45681451)
chr3 (250-326)||(7672334-7672410)
chr3 (303-347)||(32536464-32536508)
chr3 (253-344)||(30843819-30843910)
chr3 (305-344)||(47944335-47944374)
chr3 (295-341)||(23195740-23195786)
chr3 (303-347)||(39336795-39336839)
[»] scaffold0687 (1 HSPs)
scaffold0687 (295-347)||(1619-1671)
[»] chr8 (10 HSPs)
chr8 (295-347)||(7603935-7603987)
chr8 (295-347)||(40680074-40680126)
chr8 (273-347)||(4586770-4586844)
chr8 (295-347)||(21215940-21215992)
chr8 (305-341)||(29908950-29908986)
chr8 (273-343)||(42660085-42660155)
chr8 (314-347)||(6049172-6049205)
chr8 (253-346)||(8340319-8340411)
chr8 (314-343)||(35447600-35447629)
chr8 (295-343)||(18080463-18080511)
[»] chr6 (5 HSPs)
chr6 (273-347)||(9307250-9307324)
chr6 (298-343)||(31315298-31315343)
chr6 (304-343)||(9762629-9762668)
chr6 (303-344)||(25085100-25085141)
chr6 (301-338)||(30000001-30000038)
[»] chr1 (9 HSPs)
chr1 (295-345)||(38445183-38445233)
chr1 (295-343)||(29795276-29795324)
chr1 (253-337)||(39162406-39162490)
chr1 (302-345)||(31415068-31415111)
chr1 (300-339)||(43115654-43115693)
chr1 (308-343)||(45679559-45679594)
chr1 (301-347)||(21379283-21379329)
chr1 (295-328)||(2262183-2262216)
chr1 (305-345)||(51849568-51849608)
[»] chr5 (11 HSPs)
chr5 (299-344)||(296546-296591)
chr5 (303-339)||(3599845-3599881)
chr5 (302-341)||(13200852-13200891)
chr5 (296-338)||(37269117-37269159)
chr5 (295-345)||(42932827-42932877)
chr5 (273-345)||(8206307-8206379)
chr5 (296-328)||(9577097-9577129)
chr5 (309-341)||(19342534-19342566)
chr5 (253-341)||(26675287-26675375)
chr5 (253-341)||(26946895-26946983)
chr5 (263-343)||(27001402-27001482)
[»] scaffold0050 (1 HSPs)
scaffold0050 (307-347)||(81349-81389)
[»] chr2 (10 HSPs)
chr2 (314-344)||(6686797-6686827)
chr2 (274-344)||(7165761-7165831)
chr2 (253-343)||(40124264-40124354)
chr2 (295-344)||(6788501-6788550)
chr2 (299-344)||(12676427-12676472)
chr2 (295-344)||(19206517-19206566)
chr2 (295-339)||(1517582-1517626)
chr2 (295-339)||(18858011-18858055)
chr2 (295-343)||(18903185-18903233)
chr2 (305-341)||(29488709-29488745)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 91 - 347
Target Start/End: Complemental strand, 39331432 - 39331177
Alignment:
Q  91 tgtcattgaattgaagaccaaataatattaatcttttttctaattactccaattttacaaccctacaaacaatagtatacgagtacctttcctaatcgtt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39331432 tgtcattgaattgaagaccaaataatattaatcttttttctaattactccaattttacaaccctccaaacaatagtatccgagtacctttcctaatcgtt 39331333  T
Q  191 ttacacacnnnnnnngaagtggcaagcaatggccatttgcatggtacgtaggtggaatgagataataatcattttggttctcgaatgtgtaataagcagt 290  Q
    ||||||||       ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||| |||| ||||||||||||     
T  39331332 ttacacacaaaaaa-gaagtggcaagcaatggccatttgcatggtacgtacgtggaatggaataataatcattttgattcttgaatttgtaataagcagc 39331234  T
Q  291 gaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39331233 gaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 39331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 39331488 - 39331419
Alignment:
Q  6 agtgagatgaaatgatatactactactaggagtaagctgtaaaca--tgtaaccaatgtcattgaattga 73  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  39331488 agtgaaatgaaatgatatactactactaggagtaagctgtaaacatgtgtaaccaatgtcattgaattga 39331419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 7617017 - 7616968
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7617017 atagtcttttaatgtattaaaattttaaaatagtttttgattttgcactt 7616968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 273 - 342
Target Start/End: Original strand, 12922186 - 12922255
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcac 342  Q
    |||||||||||||| ||| || ||||| ||| ||||||| ||||||| ||||||||||||||||||||||    
T  12922186 gaatgtgtaataagtagtcacaatagtatttcaatgtatcgaaatttcaaaatagtttttgattgtgcac 12922255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 25855323 - 25855282
Alignment:
Q  302 tttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  25855323 tttaatgtattgaaattttaaaatagtctttgattgtgcact 25855282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 13834595 - 13834523
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    ||||||||||| || ||| || | |||||||||||||||| ||||||||||||||| | ||||| | ||||||    
T  13834595 gaatgtgtaatgagtagtcacaacagtcttttaatgtattaaaattttaaaatagtctctgattttacacttc 13834523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 42375341 - 42375245
Alignment:
Q  251 gataataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||| |||||||| || | ||||||||||| || ||  || ||| |  |||||||||| ||||||| ||| |||||||||||| ||||||||||    
T  42375341 gataatagtcattttgattattgaatgtgtaatgagtagccacaataattctttaatgtatcgaaatttcaaagtagtttttgattctgcacttcgt 42375245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 32934194 - 32934155
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  32934194 aatgtatcaaaattttaaaatagtttttgattgtgcactt 32934155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 22467250 - 22467292
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  22467250 aatgtattgaaatttgaaaatagtctttaattgtgcacttcgt 22467292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Complemental strand, 21241853 - 21241804
Alignment:
Q  296 tagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    ||||| ||| ||||||  |||||||||||||||||| |||||||||||||    
T  21241853 tagtcctttgatgtatcaaaattttaaaatagttttcgattgtgcacttc 21241804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 24806840 - 24806760
Alignment:
Q  248 tgagataataatcattttggt-tctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagt 328  Q
    |||| ||||| |||||||||| ||| ||||| |||||||| ||| || ||||||  ||||||||||||||||| ||||||||    
T  24806840 tgaggtaatagtcattttggtatct-gaatgcgtaataagtagttacaatagtcccttaatgtattgaaatttgaaaatagt 24806760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 26499279 - 26499352
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaata 326  Q
    ||||| ||||||||||||  |||||||||| ||| ||| || ||| ||| |||||||||| ||||| |||||||    
T  26499279 taatagtcattttggttcctgaatgtgtaaaaagtagtcacaataatctcttaatgtattaaaattctaaaata 26499352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 51226171 - 51226123
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||| ||||||| |||||| |||||| ||| |||||||||||||    
T  51226171 atagtctttcaatgtatcgaaattctaaaattgttcttgattgtgcact 51226123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 8929495 - 8929542
Alignment:
Q  297 agtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  8929495 agtcttttaatgtattaaaattttaaaatagtttttgattttgcactt 8929542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 23441495 - 23441547
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||| || ||||||| ||||||||||||||||| |||||||||||||||||    
T  23441495 atagtccttcaatgtatcgaaattttaaaatagttattgattgtgcacttcgt 23441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 12849814 - 12849733
Alignment:
Q  263 tttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||||||| ||||||| ||| || ||| || |||||||||||||||||  |||||  |||||||| | |||||||||||||    
T  12849814 tttggttcttgaatgtgcaatgagtagtcacaatagtcttttaatgtatcaaaattacaaaatagtctctgattgtgcactt 12849733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 23457879 - 23457830
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||| || ||||||| ||||||||||||||||| ||||||||||||||    
T  23457879 atagtccttcaatgtatcgaaattttaaaatagttattgattgtgcactt 23457830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 23474549 - 23474601
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||| || |||||||  |||||||||||||||| |||||||||||||||||    
T  23474549 atagtccttcaatgtatcaaaattttaaaatagttattgattgtgcacttcgt 23474601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 39608689 - 39608609
Alignment:
Q  251 gataataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttt 331  Q
    ||||||||||||||| || || ||||||||||  || ||| || ||||| ||| |||||||  ||||||||||||||||||    
T  39608689 gataataatcattttagtccttgaatgtgtaaggagtagttacaatagtttttcaatgtatcaaaattttaaaatagtttt 39608609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 8062968 - 8062885
Alignment:
Q  261 attttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||| || ||||||||||  || ||| || ||||||| | |||||||| ||||||||||||||| | ||||| |||||||    
T  8062968 attttggtccttgaatgtgtaacgagtagtcacaatagtctgtcaatgtattaaaattttaaaatagtatctgattttgcactt 8062885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 46720071 - 46720032
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  46720071 aatgtattgaaattttaaaatggtatttgattgtgcactt 46720032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 343
Target Start/End: Complemental strand, 29197201 - 29197172
Alignment:
Q  314 aaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||||||||||||||||||||||||    
T  29197201 aaattttaaaatagtttttgattgtgcact 29197172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 23532887 - 23532939
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||| || || |||| ||||||||||||||||| ||||||||| |||||||    
T  23532887 atagtccttcaaggtatcgaaattttaaaatagttattgattgtggacttcgt 23532939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Complemental strand, 30793193 - 30793161
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattg 337  Q
    |||||||||||||||||||||||||||| ||||    
T  30793193 aatgtattgaaattttaaaatagtttttaattg 30793161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 43576526 - 43576486
Alignment:
Q  301 ttttaatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    |||||||||||| |||||| ||||||||| |||||||||||    
T  43576526 ttttaatgtattaaaatttaaaaatagttgttgattgtgca 43576486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Complemental strand, 47944603 - 47944561
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  47944603 aatgtattgaaattttaaaatagtctttgattgtgcacttcgt 47944561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 45681451 - 45681402
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||||||| ||||||||||||||||||||||||  |||||| |||||||    
T  45681451 atagtctttaaatgtattgaaattttaaaatagtccttgattatgcactt 45681402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 7672334 - 7672410
Alignment:
Q  250 agataataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaata 326  Q
    |||||||| |||||||||| || |||||||||||||  ||| |  ||| |||||||||||||| ||||| |||||||    
T  7672334 agataatagtcattttggtccttgaatgtgtaataaatagttataataatcttttaatgtattaaaattctaaaata 7672410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 32536464 - 32536508
Alignment:
Q  303 ttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||    
T  32536464 ttaatgtattgaaattctaaaataatttttgattgtgcatttcgt 32536508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 30843910 - 30843819
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||| ||| ||||||||  ||||||||||| || ||| || ||||||| |||||||||  |||||  |||||||| | |||||||||||||    
T  30843910 taatagtcactttggttcctgaatgtgtaatgagtagtcacaatagtctcttaatgtatcaaaattccaaaatagtctctgattgtgcactt 30843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 47944335 - 47944374
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  47944335 aatgtatcgaaattttaaaatagtctttgattgtgcactt 47944374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 23195786 - 23195740
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    ||||||||| |||||||| ||||||||||||| ||| ||||||||||    
T  23195786 atagtctttcaatgtattaaaattttaaaataatttctgattgtgca 23195740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 39336839 - 39336795
Alignment:
Q  303 ttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||| |||| |||||||||||||||||||||||| | |||||||    
T  39336839 ttaatatattaaaattttaaaatagtttttgattgcggacttcgt 39336795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 1619 - 1671
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||    
T  1619 atagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgt 1671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 7603935 - 7603987
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||||| |||||||  ||||||||||||| ||||||||||||||||||||    
T  7603935 atagtctttcaatgtatcaaaattttaaaataatttttgattgtgcacttcgt 7603987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 40680074 - 40680126
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||||||  ||||| ||||||||||| ||||||||||||||||    
T  40680074 atagtcttttaatgtatcaaaattctaaaatagtttatgattgtgcacttcgt 40680126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 4586770 - 4586844
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||||||  || ||| || ||||||| |||||||||| ||||||||||||||| | ||||| ||||||||||    
T  4586770 gaatgtgtaacgagtagttacaatagtctcttaatgtattaaaattttaaaatagtctatgattttgcacttcgt 4586844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 21215940 - 21215992
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||| || ||||||||||||||| ||||||||  |||||||||||||||||    
T  21215940 atagtccttcaatgtattgaaatttcaaaatagtcattgattgtgcacttcgt 21215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 29908950 - 29908986
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    ||||||||||||||||||||||||| |||||||||||    
T  29908950 aatgtattgaaattttaaaatagttattgattgtgca 29908986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 343
Target Start/End: Complemental strand, 42660155 - 42660085
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    |||||||| ||||| ||| |  ||||||| |||||||||| | ||||||||||||| ||||||| ||||||    
T  42660155 gaatgtgtcataagtagtcagaatagtctcttaatgtattaagattttaaaatagtctttgattatgcact 42660085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 347
Target Start/End: Complemental strand, 6049205 - 6049172
Alignment:
Q  314 aaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||||| |||||||||||||||||    
T  6049205 aaattttaaaatagttcttgattgtgcacttcgt 6049172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 8340411 - 8340319
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcg 346  Q
    ||||| ||||||||||||| |||||| |||| || ||| || | |||| ||||||||| | ||| || |||||| |||||||||||||| ||||    
T  8340411 taatagtcattttggttcttgaatgtataatgagtagtcacaacagtcctttaatgta-tcaaaattcaaaataatttttgattgtgcatttcg 8340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 343
Target Start/End: Original strand, 35447600 - 35447629
Alignment:
Q  314 aaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||||||||||||||||||||||||    
T  35447600 aaattttaaaatagtttttgattgtgcact 35447629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 18080511 - 18080463
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||| |||||||||  |||||| |||||| ||||||||||||||||    
T  18080511 atagtctcttaatgtatcaaaatttcaaaatattttttgattgtgcact 18080463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 9307250 - 9307324
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    |||||||||||||  |||||  ||||||| | |||||||  ||||||||||||||||||| ||| ||||||||||    
T  9307250 gaatgtgtaataaatagtgataatagtctctaaatgtatcaaaattttaaaatagttttttattatgcacttcgt 9307324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 31315343 - 31315298
Alignment:
Q  298 gtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||    
T  31315343 gtctcttaatgtattaaaattttaaaatagtctttgattgtgcact 31315298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 343
Target Start/End: Complemental strand, 9762668 - 9762629
Alignment:
Q  304 taatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  9762668 taatgtatcaaaattttaaaatagtttttgattgtgcact 9762629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 344
Target Start/End: Complemental strand, 25085141 - 25085100
Alignment:
Q  303 ttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||  ||||||||||||| |||||||||||||||||    
T  25085141 ttaatgtatcaaaattttaaaatactttttgattgtgcactt 25085100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 338
Target Start/End: Complemental strand, 30000038 - 30000001
Alignment:
Q  301 ttttaatgtattgaaattttaaaatagtttttgattgt 338  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  30000038 ttttaaggtattaaaattttaaaatagtttttgattgt 30000001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 345
Target Start/End: Complemental strand, 38445233 - 38445183
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    |||||| |||||||||| |||||| ||||||||| ||||||||||||||||    
T  38445233 atagtcctttaatgtatcgaaattctaaaatagtctttgattgtgcacttc 38445183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 29795324 - 29795276
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||||||||    
T  29795324 atagtcttttaatatatcaaaattttaaaatagtatttgattgtgcact 29795276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 39162406 - 39162490
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattg 337  Q
    ||||| |||||||||| || ||||| ||||| || | | || |||||  || ||||||||||||||| |||||||||||||||||    
T  39162406 taatagtcattttggtccttgaatgcgtaatgagtaatcacaatagtacttcaatgtattgaaatttcaaaatagtttttgattg 39162490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 31415111 - 31415068
Alignment:
Q  302 tttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||    
T  31415111 tttaatgtatttaaattttaaaatagtatttgattgtgtacttc 31415068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 43115654 - 43115693
Alignment:
Q  300 cttttaatgtattgaaattttaaaatagtttttgattgtg 339  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  43115654 cttttagtatattgaaattttaaaatagtttttgattgtg 43115693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 343
Target Start/End: Original strand, 45679559 - 45679594
Alignment:
Q  308 gtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||| ||||||||||||||||||||||||||||||    
T  45679559 gtattaaaattttaaaatagtttttgattgtgcact 45679594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 21379283 - 21379329
Alignment:
Q  301 ttttaatgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||| |||| |||| |||||||||||||||| ||||||||||||    
T  21379283 ttttaatatatttaaatattaaaatagtttttgaatgtgcacttcgt 21379329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 328
Target Start/End: Complemental strand, 2262216 - 2262183
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagt 328  Q
    |||||| |||||||||||||||||||||||||||    
T  2262216 atagtcctttaatgtattgaaattttaaaatagt 2262183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 51849608 - 51849568
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    |||||||| ||||||||||||||||| ||||||| ||||||    
T  51849608 aatgtattaaaattttaaaatagtttgtgattgtacacttc 51849568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 296591 - 296546
Alignment:
Q  299 tcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||    
T  296591 tcttttaatgcattgaaattttaaaataagttttgattgtgcactt 296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 3599845 - 3599881
Alignment:
Q  303 ttaatgtattgaaattttaaaatagtttttgattgtg 339  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3599845 ttaatgtattgaaattttaaaatagtgtttgattgtg 3599881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 341
Target Start/End: Complemental strand, 13200891 - 13200852
Alignment:
Q  302 tttaatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    ||||||||| ||||||||||||||| ||||||||||||||    
T  13200891 tttaatgtagtgaaattttaaaatattttttgattgtgca 13200852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 37269159 - 37269117
Alignment:
Q  296 tagtcttttaatgtattgaaattttaaaatagtttttgattgt 338  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||    
T  37269159 tagtttttaaatgtattgaaatttaaaaatagtttttgattgt 37269117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 42932827 - 42932877
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    ||||| ||||||||||| |||||||||||||||||| | |||||| |||||    
T  42932827 atagttttttaatgtatcgaaattttaaaatagtttctcattgtgtacttc 42932877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 8206379 - 8206307
Alignment:
Q  273 gaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcacttc 345  Q
    |||||||||||||| ||| |  |||||| |||||||||| ||||||||| ||||||   ||| ||||||||||    
T  8206379 gaatgtgtaataagtagtcatgatagtcctttaatgtatcgaaattttataatagtccctgaatgtgcacttc 8206307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Original strand, 9577097 - 9577129
Alignment:
Q  296 tagtcttttaatgtattgaaattttaaaatagt 328  Q
    |||||||||||||||| ||||||||||||||||    
T  9577097 tagtcttttaatgtatcgaaattttaaaatagt 9577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 19342566 - 19342534
Alignment:
Q  309 tattgaaattttaaaatagtttttgattgtgca 341  Q
    |||| ||||||||||||||||||||||||||||    
T  19342566 tattaaaattttaaaatagtttttgattgtgca 19342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 26675375 - 26675287
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    ||||| ||| ||||||||| ||||||||||| |  | | || ||| |||||||||||||  | ||| ||||||||| ||||||||||||    
T  26675375 taatagtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaatagtctttgattgtgca 26675287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 26946983 - 26946895
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    ||||| ||| ||||||||| ||||||||||| |  | | || ||| |||||||||||||  | ||| ||||||||| ||||||||||||    
T  26946983 taatagtcactttggttcttgaatgtgtaatgactaatcacaataatcttttaatgtatcaatattctaaaatagtctttgattgtgca 26946895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 27001482 - 27001402
Alignment:
Q  263 tttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||||||| ||||||||||| || ||| || ||||||| |  || |||  ||||||||||||||| | ||||||||||||    
T  27001482 tttggttcttgaatgtgtaatgagtagtcacaatagtctctcgatatatcaaaattttaaaatagtctctgattgtgcact 27001402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 81349 - 81389
Alignment:
Q  307 tgtattgaaattttaaaatagtttttgattgtgcacttcgt 347  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  81349 tgtattgaaatttcaaaatagtttatgattgtgcacttcgt 81389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 344
Target Start/End: Original strand, 6686797 - 6686827
Alignment:
Q  314 aaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||||||||||||||||||||||||    
T  6686797 aaattttaaaatagtttttgattgtgcactt 6686827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 344
Target Start/End: Complemental strand, 7165831 - 7165761
Alignment:
Q  274 aatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||||||  || ||| || ||||||||| |||||||| ||||||||||||||| | ||||| |||||||    
T  7165831 aatgtgtaacgagtagtcacaatagtctttcaatgtattaaaattttaaaatagtctctgattttgcactt 7165761  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 40124264 - 40124354
Alignment:
Q  253 taataatcattttggttctcgaatgtgtaataagcagtgaccatagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    ||||| ||| |||||| || ||||||||||  || ||| || ||||||  ||||||||| ||||||||||||| || | ||||||||||||    
T  40124264 taatagtcactttggtccttgaatgtgtaacgagtagtcacaatagtccattaatgtatcgaaattttaaaatggtctctgattgtgcact 40124354  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 6788550 - 6788501
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||| || |||||||  ||||||||||||||||| |||||||||||||    
T  6788550 atagtcattcaatgtatcaaaattttaaaatagtttctgattgtgcactt 6788501  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 12676427 - 12676472
Alignment:
Q  299 tcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    ||||||||||||| ||||| |||||||||| | |||||||||||||    
T  12676427 tcttttaatgtatcgaaatgttaaaatagtctatgattgtgcactt 12676472  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 19206566 - 19206517
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcactt 344  Q
    |||||| ||||||||||  ||||||||||||||||| ||||| |||||||    
T  19206566 atagtcctttaatgtatcaaaattttaaaatagtttctgattatgcactt 19206517  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 1517582 - 1517626
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtg 339  Q
    |||||| || ||||||| |||||||||||||||| ||||||||||    
T  1517582 atagtccttcaatgtatcgaaattttaaaatagtctttgattgtg 1517626  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 18858011 - 18858055
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtg 339  Q
    ||||||||||||| ||| ||||||||||||||| || ||||||||    
T  18858011 atagtcttttaatatatcgaaattttaaaatagattatgattgtg 18858055  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 18903233 - 18903185
Alignment:
Q  295 atagtcttttaatgtattgaaattttaaaatagtttttgattgtgcact 343  Q
    |||||| || ||||||| |||||| ||||||||||| ||||||||||||    
T  18903233 atagtcattcaatgtatcgaaattctaaaatagtttctgattgtgcact 18903185  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 29488709 - 29488745
Alignment:
Q  305 aatgtattgaaattttaaaatagtttttgattgtgca 341  Q
    |||||||  ||||||||||||||||||||||||||||    
T  29488709 aatgtatcaaaattttaaaatagtttttgattgtgca 29488745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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