View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2097_low_23 (Length: 347)
Name: NF2097_low_23
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2097_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 94 - 337
Target Start/End: Complemental strand, 11100934 - 11100694
Alignment:
| Q |
94 |
aagattaggaatcactatgttgaatattgtcctatactcatttataaaatataatttagcgtgtagttggagagagtaggttatttttgaacaaaattaa |
193 |
Q |
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| T |
11100934 |
aagattaggaatcactatgttgaatattgtcctatactcatttataaaatataatttagcgtgtagttggagagagtaggttatttttgaacaaaattaa |
11100835 |
T |
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| Q |
194 |
gcttgtttgttagaattcttcactcaaaagcnnnnnnnnnntatgatgagaaaatatacaccaagttttagaagatcttagtgtagaaaagtttcacatt |
293 |
Q |
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||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11100834 |
gcttgtttgttagaattcttcactcaaaaac---aaaaaaatatgatgagaaaatatacaccaagttttagaagatcttagtgtagaaaagtttcacatt |
11100738 |
T |
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| Q |
294 |
aactaatatacgcatatacaccaagttatgtgcacgtttctgtg |
337 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11100737 |
aactaatatacgcatatacaccaagttatgtgcacgtttctgtg |
11100694 |
T |
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