View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2097_low_48 (Length: 255)
Name: NF2097_low_48
Description: NF2097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2097_low_48 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 254
Target Start/End: Complemental strand, 30348677 - 30348438
Alignment:
| Q |
13 |
aatatgatatgtcatgacaactaacggaaaagtagaaaccgattaacgtcaaagactaatataactaccagattaattatttagggggattttctatatt |
112 |
Q |
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| T |
30348677 |
aatatgatatgtcatgacaactaacggaaaagtagaaaccgattaacatcaaagactaatataactaccagattaattatttaggggggttttctatatt |
30348578 |
T |
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| Q |
113 |
ttttctttctacgttctattgtatcaaccactctcttacatgaagagtaaagtaggatgcatatacacacaataaattaacagattaaaacaagattgaa |
212 |
Q |
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| T |
30348577 |
ttttctttctacgttatattgcatcaaccactctcttacataaagagtaaagtagaatacatatacacacaataaattaacagactaaaac--gattgaa |
30348480 |
T |
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| Q |
213 |
tatttttgttcgagaatctcataagatggaatataaataaag |
254 |
Q |
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| T |
30348479 |
tatttttgttcgagaatctcataaaatggaatataaataaag |
30348438 |
T |
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