View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20980_low_34 (Length: 207)
Name: NF20980_low_34
Description: NF20980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20980_low_34 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 189
Target Start/End: Original strand, 44987620 - 44987800
Alignment:
| Q |
14 |
caaagggaaaattcttgttcaagatgatggagctttgaatgatagcacagaagcagaactcaccaaaatcaacctcatgagaactcttgttgaaagccgg |
113 |
Q |
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| T |
44987620 |
caaagggaaaattcttgttcaagatgatggagctttgaatgatagcacagaagcagaactcaccaaaatcaacctcatgagaactcttgttgaaagccgg |
44987719 |
T |
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| Q |
114 |
gacccttcttctaaggtaacaaacatcatcatc-----acatgacatcatcgtatttagttttgataaaacagttaatctt |
189 |
Q |
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| T |
44987720 |
gacccttcttctaaggtaacaaacatcatcatcacatgacatgacatcatcgtatttaattttgataaaacagttaatctt |
44987800 |
T |
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