View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20982_low_7 (Length: 345)
Name: NF20982_low_7
Description: NF20982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20982_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 48 - 331
Target Start/End: Complemental strand, 30968260 - 30967995
Alignment:
| Q |
48 |
cagttttcagactctggctttttcagtaatagagaagatcctgctacttatgaggaagctgcaaagttcaattgttggaaagaggctatggatcaggaaa |
147 |
Q |
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| T |
30968260 |
cagttttcagactctggctttttcagtaatagagaagatcctgctacttatgaggaagctgcaaagttcaattgttggaaagaggctatggatcaggaaa |
30968161 |
T |
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| Q |
148 |
ttgaagccatagaaagaaatgatacatgggaactaactgatttaccaactggaagcaggaagattagtgtaaaatggatttataagacaa--tacaatga |
245 |
Q |
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| T |
30968160 |
ttgaagccatagaaagaaatgatac--------------------caactggaagcaggaagattagtgtaaaatggatttataagacaaaatacaatga |
30968081 |
T |
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| Q |
246 |
aaatggtaaagttgaaaaacacaaagccagattagtagcaaaggggtactctcaaaagtatggagttgattacaatgaagtttttg |
331 |
Q |
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| T |
30968080 |
aaatggtaaagttgaaaaacacaaagccagattagtagcaaaggggtactctcaaaagtatggagttgattacaatgaagtttttg |
30967995 |
T |
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