View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20983_low_47 (Length: 248)
Name: NF20983_low_47
Description: NF20983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20983_low_47 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 38951115 - 38951342
Alignment:
| Q |
4 |
attatactgacaactaatcaatcaataaaatataaatattggcgactaatggatgccatttttagcttaaactaaggatcagtacatagacgccaccaac |
103 |
Q |
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| T |
38951115 |
attatattgacaactaatcaatcaataaaatataaatattggcgactaatggatgccatttttagcttaaactaaggatcagtacatagacgccaccaac |
38951214 |
T |
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| Q |
104 |
cattctatagtttccaacataaaatatccaattttctttgactggataacttctacttttattctatgtaaacttatttgtttgatttctgataatttga |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38951215 |
cattctatagtttccaacataaaatatccaattttctttgaccggataacttctacttttattctatgtaaacttatttgtttgatttctgataatttga |
38951314 |
T |
|
| Q |
204 |
aaatgacaattttcatgtttctactcta |
231 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
38951315 |
aaatgacaattttcatgtttctactcta |
38951342 |
T |
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