View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20983_low_51 (Length: 225)
Name: NF20983_low_51
Description: NF20983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20983_low_51 |
 |  |
|
| [»] chr1 (4 HSPs) |
 |  |
|
| [»] scaffold1961 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15196509 - 15196285
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15196509 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
15196410 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15196409 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
15196310 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgcta |
225 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
15196309 |
aatcacagaaattgattgagcgcta |
15196285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15216927 - 15216703
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15216927 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
15216828 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15216827 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
15216728 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgcta |
225 |
Q |
| |
|
|||||||||||||||||||| |||| |
|
|
| T |
15216727 |
aatcacagaaattgattgagcgcta |
15216703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15195858 - 15195635
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||||||| | | |||| ||||| |
|
|
| T |
15195858 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgctttgggaattagtatgcaagtactatgctggagaagttgttaacataaaagtgatt |
15195759 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| || |||| |||||||||||||||| |
|
|
| T |
15195758 |
agaaatataacaaatatgctaatggatttaggaccttccgtttatgtgcaagaatttgagaatccttttctgcagcttccagccgagttctaccgggctg |
15195659 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgct |
224 |
Q |
| |
|
||||||||||||| |||||||||| |
|
|
| T |
15195658 |
aatcacagaaatttattgagtgct |
15195635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15216276 - 15216053
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||||||| | | |||| ||||| |
|
|
| T |
15216276 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgctttgggaattagtatgcaagtactatgctggagaagttgttaacataaaagtgatt |
15216177 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||| || |||| |||||||||||||||| |
|
|
| T |
15216176 |
agaaatataacaaatatgctaatggatttaggaccttccgtttatgtgcaagaatttgagaatccttttctgcagcttccagccgagttctaccgggctg |
15216077 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgct |
224 |
Q |
| |
|
||||||||||||| |||||||||| |
|
|
| T |
15216076 |
aatcacagaaatttattgagtgct |
15216053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1961 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold1961
Description:
Target: scaffold1961; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 207 - 1
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||||||||| ||||| ||| ||| |||||||||| |
|
|
| T |
207 |
tgttatttattcaaaccagataaggactcgatttttgaatatgcttttgggattaatatgcaaggactatgctgaggaagtcgttaataaaaaactgatt |
108 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
107 |
agaaaaataacgaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
8 |
T |
 |
| Q |
201 |
aatcaca |
207 |
Q |
| |
|
||||||| |
|
|
| T |
7 |
aatcaca |
1 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17570283 - 17570506
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||| |||| ||| | |||||||| |
|
|
| T |
17570283 |
tgttatttactcaaaacagatcaggactcgactgtcgaatatgcttttggaattagtatgcaaggaacgtgctggggaagatgttaatatagaactgatt |
17570382 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
| | |||| ||||| |||||||||||||||||| |||| |||||| ||||||||| |||| | | || || ||||||||||||||||||||| |||||| |
|
|
| T |
17570383 |
aaaaatattacaaagatgctaatggatttaggttcttctgtttatgagcaagaattcgagacttcgtttctacaagtttcagctgagttctacagggctg |
17570482 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgct |
224 |
Q |
| |
|
|||| |||||||| || ||||||| |
|
|
| T |
17570483 |
aatctcagaaatttatcgagtgct |
17570506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 224
Target Start/End: Original strand, 17563195 - 17563410
Alignment:
| Q |
9 |
attcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgattagatatat |
108 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| || ||||||||| ||||| |||||||||| ||| |
|
|
| T |
17563195 |
attcaaaccagataaggactcgactgttgaatatgcttttggaattagtacgcagtgagcgtgccggcgaagttgttaatagaggactgattagaagtat |
17563294 |
T |
 |
| Q |
109 |
aacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctgaatcacag |
208 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||||| | ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||||| |
|
|
| T |
17563295 |
aacaaagatgctaattgatacaggtccttccgtttatggggaagaatttgagaatccttttctgctagcttcaactgagttctatcgggctgaatcacag |
17563394 |
T |
 |
| Q |
209 |
aaattgattgagtgct |
224 |
Q |
| |
|
| ||| |||||||||| |
|
|
| T |
17563395 |
atatttattgagtgct |
17563410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 17691018 - 17690807
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| |||||| ||| || |||| |||| | ||| |||||||| |
|
|
| T |
17691018 |
tgttatttattcaaaccagataaggaatcgattgtcgaatatgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
17690919 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| || | ||||| |||||||| |||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| | ||| ||||| |
|
|
| T |
17690918 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
17690819 |
T |
 |
| Q |
201 |
aatcacagaaat |
212 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
17690818 |
aatcccagaaat |
17690807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 17684092 - 17683907
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| |||||||| || |||| ||||| | ||| || |||| |||| | ||| |||||||| |
|
|
| T |
17684092 |
tgttatttattcaaaccagataaggactcaactgtcgaatacgcttttggagtttgtatttaaggagtgtgccggggaagatgttaacagagaactgatt |
17683993 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
186 |
Q |
| |
|
||| || | ||||| |||||||| |||||||||||||| |||||| |||||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
17683992 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagaatttgagactccttttctgcaagttttagctga |
17683907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 17702176 - 17701991
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||| || || ||| || |||| |||| | ||| |||||||| |
|
|
| T |
17702176 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtacttaaagagcgtgccggggaagatgttaacagagaactgatt |
17702077 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
186 |
Q |
| |
|
||| || | ||||| |||||||| |||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
17702076 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
17701991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14758252 - 14758029
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||| |||| ||| | |||||||| |
|
|
| T |
14758252 |
tgttatttactcaaaacagatcaggactcgactgtcgaatatgcttttggaattagtatgcaaggaacgtgctggggaagatgttaatatagaactgatt |
14758153 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
| | |||| ||||| |||||||||||||||||| |||| ||||| ||||||||| |||| | | || || ||||||||||||||||||||| |||||| |
|
|
| T |
14758152 |
aaaaatattacaaagatgctaatggatttaggttcttctgtttaagagcaagaattcgagacttcgtttctacaagtttcagctgagttctacagggctg |
14758053 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgct |
224 |
Q |
| |
|
|||| |||||||| || ||||||| |
|
|
| T |
14758052 |
aatctcagaaatttatcgagtgct |
14758029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 14765404 - 14765189
Alignment:
| Q |
9 |
attcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgattagatatat |
108 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||| ||||||| || || ||| || ||||||||| ||||| |||||||||| ||| |
|
|
| T |
14765404 |
attcaaaccagataaggactcgactgttgaatatgcttttggaattagtacacagtgagcgtgccggcgaagttgttaatagaggactgattagaagtat |
14765305 |
T |
 |
| Q |
109 |
aacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctgaatcacag |
208 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||||| | ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||||| |
|
|
| T |
14765304 |
aacaaagatgctaattgatacaggtccttccgtttatgaggaagaatttgagaatccttttctgctagcttcaactgagttctatcgggctgaatcacag |
14765205 |
T |
 |
| Q |
209 |
aaattgattgagtgct |
224 |
Q |
| |
|
| ||| |||||||||| |
|
|
| T |
14765204 |
atatttattgagtgct |
14765189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14750330 - 14750118
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||| |||||| |||| |||| ||||| ||| |||| |
|
|
| T |
14750330 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtattcaaggagcatgctgcggaagatgttaatagagaaccgatt |
14750231 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| || || |||| |||||||||||||||||||| | |||||| | |||||||||||| |||||| | |||||||||||||||||||| |||||| |
|
|
| T |
14750230 |
agaaatctatcaaagatgctaatggatttaggtccctttgtttatgaggaagaatttgagactccttttttacaagtttcagctgagttctatagggctg |
14750131 |
T |
 |
| Q |
201 |
aatcacagaaatt |
213 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
14750130 |
aatcccagaaatt |
14750118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14661169 - 14661392
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||| ||| || |||| |||| | ||| |||||||| |
|
|
| T |
14661169 |
tgttatttattcaaaccagataaggactcgactgtcgaatacgcttttggagtttgtattcaaggagcgtgccggggaagatgttaacagagaactgatt |
14661268 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| || | ||||| |||||||| |||||||||||||| |||||| |||||||||||||| |||||| |||||||||| |||||| | ||| ||||| |
|
|
| T |
14661269 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagaatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
14661368 |
T |
 |
| Q |
201 |
aatcacagaaattgattgagtgct |
224 |
Q |
| |
|
|||| |||||| |||||||||| |
|
|
| T |
14661369 |
aatctgagaaatatattgagtgct |
14661392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14652734 - 14652945
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| ||||| ||| || |||| |||| | ||| |||||||| |
|
|
| T |
14652734 |
tgttatttattcaaaccagataaggactcgattgtcgaatacgcttttggagtttgtatttaaggagcgtgccggggaagatgttaacagagaactgatt |
14652833 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagttctaccgggctg |
200 |
Q |
| |
|
||| || | ||||| ||||| ||||||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| | ||| ||||| |
|
|
| T |
14652834 |
agaaatgttacaaagatgctgatggatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctgaatcttacaaggctg |
14652933 |
T |
 |
| Q |
201 |
aatcacagaaat |
212 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
14652934 |
aatcccagaaat |
14652945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 14627317 - 14627502
Alignment:
| Q |
1 |
tgttatttattcaaaccagataaggactcgattgtcgaatatgcttttggtattagtatgcaaggactatgctggagaagttgttgatagaaaactgatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| |||||||| || |||| || || ||| || |||| |||| | ||| |||||||| |
|
|
| T |
14627317 |
tgttatttattcaaaccagataaggaatcgattgtcgaatacgcttttggagtttgtatttaaagagcgtgccggggaagatgttaacagagaactgatt |
14627416 |
T |
 |
| Q |
101 |
agatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctga |
186 |
Q |
| |
|
||| || | ||||| |||||||| |||||||||||||| |||||| ||||| |||||||| |||||| |||||||||| |||||| |
|
|
| T |
14627417 |
agaaatgttacaaagatgctaattgatttaggtccttctgtttatgagcaagtatttgagactccttttctgcaagttttagctga |
14627502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 24395728 - 24395644
Alignment:
| Q |
105 |
atataacaaatatgctaatggatttaggtccttccgtttatatgcaagaatttgagaatcctttgctgcaagtttcagctgagtt |
189 |
Q |
| |
|
|||||||||| |||||||||||||||||||| | |||||| ||||| |||||| || ||| || ||||||||||||||||| |
|
|
| T |
24395728 |
atataacaaaaatgctaatggatttaggtccagctgtttatggtcaagattttgaggctcattttcttcaagtttcagctgagtt |
24395644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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