View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20984_low_2 (Length: 545)

Name: NF20984_low_2
Description: NF20984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20984_low_2
NF20984_low_2
[»] chr8 (35 HSPs)
chr8 (15-343)||(2999687-3000016)
chr8 (205-426)||(3772337-3772574)
chr8 (39-207)||(40328476-40328644)
chr8 (15-207)||(11383659-11383851)
chr8 (15-207)||(42435294-42435486)
chr8 (15-198)||(22976207-22976389)
chr8 (15-207)||(44353468-44353657)
chr8 (205-424)||(40221890-40222103)
chr8 (15-124)||(4283219-4283328)
chr8 (24-207)||(40221427-40221610)
chr8 (207-424)||(40328923-40329159)
chr8 (205-305)||(4283669-4283769)
chr8 (205-312)||(42434906-42435014)
chr8 (28-205)||(40535538-40535713)
chr8 (205-305)||(11384130-11384230)
chr8 (205-305)||(10930120-10930222)
chr8 (205-305)||(18655545-18655648)
chr8 (15-207)||(40585397-40585590)
chr8 (206-298)||(10240270-10240363)
chr8 (15-111)||(20686456-20686552)
chr8 (81-156)||(10101513-10101588)
chr8 (357-424)||(10240423-10240489)
chr8 (73-175)||(3846153-3846254)
chr8 (246-295)||(11137213-11137262)
chr8 (251-295)||(9633546-9633590)
chr8 (310-373)||(18655669-18655732)
chr8 (83-174)||(40873414-40873504)
chr8 (81-131)||(10020179-10020229)
chr8 (86-156)||(28461305-28461375)
chr8 (146-207)||(4283328-4283389)
chr8 (128-205)||(9633842-9633918)
chr8 (361-420)||(15691105-15691163)
chr8 (73-172)||(3817670-3817771)
chr8 (205-238)||(1292454-1292487)
chr8 (205-238)||(10015224-10015257)
[»] chr4 (80 HSPs)
chr4 (15-207)||(8665080-8665272)
chr4 (15-207)||(6655629-6655821)
chr4 (15-207)||(55085668-55085861)
chr4 (19-207)||(26363942-26364130)
chr4 (15-207)||(33989535-33989727)
chr4 (15-207)||(46703174-46703365)
chr4 (25-207)||(40630667-40630849)
chr4 (15-207)||(41964089-41964280)
chr4 (15-207)||(50674149-50674341)
chr4 (15-197)||(50263011-50263193)
chr4 (15-207)||(379051-379244)
chr4 (15-207)||(54882693-54882885)
chr4 (15-207)||(12073066-12073257)
chr4 (12-186)||(2209378-2209552)
chr4 (15-184)||(27417277-27417446)
chr4 (15-207)||(35662115-35662307)
chr4 (25-202)||(33089582-33089759)
chr4 (73-207)||(8647869-8648003)
chr4 (15-205)||(46569851-46570041)
chr4 (206-424)||(379527-379764)
chr4 (15-124)||(8653273-8653382)
chr4 (205-421)||(41964561-41964794)
chr4 (206-424)||(12073539-12073774)
chr4 (16-189)||(38811400-38811573)
chr4 (205-423)||(8665553-8665787)
chr4 (205-423)||(35662586-35662816)
chr4 (15-141)||(35370705-35370833)
chr4 (205-312)||(8648284-8648391)
chr4 (15-121)||(10071558-10071664)
chr4 (205-305)||(6656101-6656201)
chr4 (36-207)||(35369742-35369913)
chr4 (205-305)||(40632590-40632690)
chr4 (205-312)||(41639571-41639678)
chr4 (205-423)||(26364381-26364616)
chr4 (206-298)||(46703648-46703740)
chr4 (205-312)||(50673762-50673870)
chr4 (339-424)||(54881595-54881680)
chr4 (37-121)||(10071966-10072050)
chr4 (230-423)||(55085235-55085439)
chr4 (206-305)||(26699364-26699463)
chr4 (205-305)||(27416888-27416988)
chr4 (214-305)||(33990000-33990091)
chr4 (15-172)||(22883090-22883248)
chr4 (15-172)||(22934754-22934912)
chr4 (206-305)||(2209861-2209964)
chr4 (73-142)||(3785822-3785891)
chr4 (205-303)||(54883165-54883265)
chr4 (253-407)||(46703742-46703912)
chr4 (206-305)||(12119686-12119790)
chr4 (310-423)||(8648410-8648526)
chr4 (87-201)||(34112357-34112471)
chr4 (206-274)||(38811143-38811212)
chr4 (232-296)||(3786135-3786199)
chr4 (244-423)||(33090065-33090243)
chr4 (206-279)||(22882703-22882773)
chr4 (206-279)||(22934367-22934437)
chr4 (15-177)||(47514834-47514997)
chr4 (15-198)||(26699757-26699943)
chr4 (16-140)||(6719259-6719384)
chr4 (73-172)||(25723554-25723653)
chr4 (206-311)||(50262613-50262722)
chr4 (370-423)||(27416791-27416844)
chr4 (83-204)||(12119281-12119401)
chr4 (311-373)||(2209986-2210048)
chr4 (205-238)||(6542169-6542202)
chr4 (15-175)||(22629223-22629384)
chr4 (205-238)||(24969810-24969843)
chr4 (244-279)||(34112999-34113034)
chr4 (310-373)||(50262534-50262597)
chr4 (310-373)||(50673686-50673749)
chr4 (86-172)||(41961152-41961237)
chr4 (253-290)||(6199805-6199842)
chr4 (352-389)||(12119856-12119893)
chr4 (205-238)||(31474296-31474329)
chr4 (246-295)||(32091628-32091677)
chr4 (310-370)||(40632711-40632772)
chr4 (55-144)||(43135811-43135899)
chr4 (205-238)||(51337209-51337242)
chr4 (41-97)||(32091270-32091326)
chr4 (339-395)||(41961690-41961746)
[»] chr7 (44 HSPs)
chr7 (15-207)||(4512693-4512884)
chr7 (15-207)||(6431644-6431836)
chr7 (15-207)||(29608414-29608601)
chr7 (15-207)||(34311019-34311212)
chr7 (15-207)||(2389955-2390147)
chr7 (15-207)||(22269647-22269838)
chr7 (15-205)||(22328703-22328895)
chr7 (18-207)||(3258671-3258861)
chr7 (15-207)||(4509009-4509192)
chr7 (15-207)||(4510851-4511034)
chr7 (15-207)||(2361274-2361466)
chr7 (15-207)||(6360215-6360407)
chr7 (15-157)||(32358189-32358331)
chr7 (206-423)||(8359104-8359337)
chr7 (15-207)||(48599637-48599819)
chr7 (205-389)||(3259140-3259340)
chr7 (15-143)||(5116307-5116436)
chr7 (205-407)||(29608882-29609094)
chr7 (206-305)||(22328312-22328411)
chr7 (205-305)||(4508629-4508729)
chr7 (205-312)||(48599250-48599357)
chr7 (246-424)||(2390472-2390668)
chr7 (205-303)||(32357979-32358077)
chr7 (205-310)||(4510466-4510571)
chr7 (205-310)||(4512308-4512413)
chr7 (207-305)||(34310637-34310736)
chr7 (119-207)||(8359621-8359708)
chr7 (352-424)||(22328182-22328254)
chr7 (81-157)||(22552791-22552866)
chr7 (205-305)||(6359872-6359975)
chr7 (15-82)||(30814438-30814505)
chr7 (83-205)||(43363719-43363839)
chr7 (310-373)||(34310552-34310616)
chr7 (244-305)||(2360899-2360960)
chr7 (352-409)||(48599139-48599196)
chr7 (246-298)||(1360102-1360154)
chr7 (310-373)||(4510386-4510450)
chr7 (310-373)||(4512228-4512292)
chr7 (250-298)||(14301390-14301437)
chr7 (250-290)||(43363406-43363446)
chr7 (205-236)||(31105385-31105416)
chr7 (205-238)||(31519048-31519081)
chr7 (391-423)||(6359741-6359773)
chr7 (341-373)||(22552453-22552485)
[»] chr3 (50 HSPs)
chr3 (18-207)||(6095902-6096091)
chr3 (15-207)||(40913011-40913204)
chr3 (15-207)||(46860143-46860336)
chr3 (15-207)||(41819825-41820016)
chr3 (15-207)||(30235798-30235990)
chr3 (15-207)||(34490886-34491078)
chr3 (15-203)||(43402097-43402285)
chr3 (15-207)||(43404036-43404228)
chr3 (15-207)||(28074290-28074481)
chr3 (15-207)||(36018523-36018716)
chr3 (15-207)||(54593377-54593570)
chr3 (15-207)||(47303925-47304116)
chr3 (15-203)||(49199778-49199966)
chr3 (15-207)||(4569624-4569816)
chr3 (15-207)||(55302268-55302460)
chr3 (206-423)||(46860621-46860857)
chr3 (15-172)||(34795542-34795700)
chr3 (206-403)||(36018995-36019208)
chr3 (15-207)||(5434180-5434374)
chr3 (205-305)||(6095522-6095622)
chr3 (206-396)||(41819340-41819544)
chr3 (206-373)||(43401635-43401822)
chr3 (38-207)||(1683184-1683353)
chr3 (36-202)||(26323821-26323986)
chr3 (206-373)||(49199303-49199490)
chr3 (206-305)||(55301894-55301993)
chr3 (19-172)||(39127236-39127389)
chr3 (205-305)||(30236270-30236371)
chr3 (205-304)||(54593849-54593951)
chr3 (205-305)||(40913438-40913542)
chr3 (207-312)||(4570100-4570207)
chr3 (246-305)||(43403662-43403721)
chr3 (356-423)||(46173669-46173738)
chr3 (211-305)||(31340144-31340240)
chr3 (244-295)||(20937842-20937893)
chr3 (244-297)||(5270557-5270610)
chr3 (311-385)||(5433774-5433843)
chr3 (205-305)||(46173502-46173604)
chr3 (206-270)||(26323027-26323092)
chr3 (83-124)||(31340462-31340503)
chr3 (310-373)||(6095438-6095501)
chr3 (83-169)||(35139046-35139133)
chr3 (311-373)||(43403578-43403640)
chr3 (205-305)||(47304396-47304503)
chr3 (206-258)||(49229607-49229659)
chr3 (15-50)||(31340501-31340536)
chr3 (315-370)||(54593978-54594033)
chr3 (247-295)||(1683661-1683710)
chr3 (312-424)||(20937927-20938033)
chr3 (235-298)||(50432573-50432634)
[»] chr2 (25 HSPs)
chr2 (15-207)||(45726603-45726794)
chr2 (15-207)||(42288413-42288604)
chr2 (15-207)||(17450264-17450456)
chr2 (15-207)||(1632035-1632227)
chr2 (15-207)||(35447187-35447379)
chr2 (25-203)||(24397739-24397919)
chr2 (9-172)||(42261947-42262111)
chr2 (15-199)||(33647841-33648027)
chr2 (16-200)||(7450975-7451158)
chr2 (206-423)||(33648319-33648548)
chr2 (205-312)||(35446800-35446907)
chr2 (205-305)||(17450722-17450822)
chr2 (205-305)||(45727074-45727172)
chr2 (15-171)||(30218372-30218529)
chr2 (213-424)||(7451270-7451501)
chr2 (205-305)||(42288033-42288134)
chr2 (206-290)||(30217982-30218065)
chr2 (312-424)||(24398349-24398457)
chr2 (86-175)||(24197643-24197731)
chr2 (205-311)||(1631651-1631755)
chr2 (15-144)||(40935545-40935675)
chr2 (206-305)||(24398205-24398307)
chr2 (310-373)||(45727193-45727257)
chr2 (311-423)||(17450844-17450956)
chr2 (89-141)||(34811599-34811651)
[»] scaffold0466 (2 HSPs)
scaffold0466 (15-207)||(7001-7193)
scaffold0466 (205-305)||(7472-7572)
[»] scaffold0286 (1 HSPs)
scaffold0286 (15-207)||(11231-11423)
[»] chr5 (35 HSPs)
chr5 (25-207)||(40146944-40147126)
chr5 (15-207)||(213141-213334)
chr5 (15-207)||(27015205-27015397)
chr5 (15-207)||(38746678-38746870)
chr5 (15-207)||(5057721-5057912)
chr5 (16-207)||(28277989-28278181)
chr5 (16-201)||(316439-316624)
chr5 (15-176)||(16642212-16642372)
chr5 (15-207)||(27637919-27638109)
chr5 (73-189)||(10055027-10055143)
chr5 (36-172)||(35615866-35616002)
chr5 (16-172)||(14689747-14689902)
chr5 (206-421)||(27637403-27637634)
chr5 (25-183)||(30792923-30793080)
chr5 (15-205)||(4160307-4160496)
chr5 (15-183)||(30802614-30802782)
chr5 (47-172)||(33906366-33906491)
chr5 (205-312)||(5058190-5058298)
chr5 (205-312)||(27015668-27015774)
chr5 (206-298)||(316910-317002)
chr5 (205-305)||(40147406-40147506)
chr5 (207-305)||(213613-213714)
chr5 (212-303)||(16640863-16640956)
chr5 (206-298)||(4160746-4160838)
chr5 (86-205)||(21205957-21206076)
chr5 (206-282)||(30793282-30793355)
chr5 (314-404)||(317038-317123)
chr5 (211-296)||(10700580-10700666)
chr5 (357-423)||(16640737-16640803)
chr5 (205-238)||(16452225-16452258)
chr5 (205-238)||(42927036-42927069)
chr5 (310-370)||(213735-213795)
chr5 (92-199)||(10700948-10701059)
chr5 (251-281)||(30803016-30803046)
chr5 (246-298)||(10054744-10054796)
[»] chr1 (59 HSPs)
chr1 (15-207)||(37167970-37168162)
chr1 (15-207)||(28242061-28242253)
chr1 (25-207)||(42298278-42298460)
chr1 (15-207)||(7482533-7482726)
chr1 (15-207)||(11348371-11348563)
chr1 (15-207)||(34603249-34603441)
chr1 (15-207)||(37033376-37033564)
chr1 (15-207)||(47114845-47115036)
chr1 (15-207)||(29135921-29136112)
chr1 (15-207)||(34602642-34602834)
chr1 (205-426)||(37168443-37168681)
chr1 (15-205)||(13547394-13547584)
chr1 (15-205)||(13549305-13549495)
chr1 (15-207)||(193285-193476)
chr1 (15-207)||(37879214-37879406)
chr1 (15-207)||(19754164-19754356)
chr1 (206-424)||(28242451-28242689)
chr1 (15-199)||(47255650-47255829)
chr1 (205-305)||(13548923-13549023)
chr1 (36-207)||(41135515-41135685)
chr1 (205-297)||(13547020-13547112)
chr1 (206-396)||(47115319-47115525)
chr1 (205-407)||(7482030-7482253)
chr1 (15-199)||(19752359-19752542)
chr1 (205-423)||(31925498-31925730)
chr1 (206-305)||(47255259-47255361)
chr1 (37-207)||(6808142-6808312)
chr1 (42-207)||(9109704-9109869)
chr1 (36-205)||(16216800-16216967)
chr1 (205-305)||(37876689-37876789)
chr1 (207-305)||(29136395-29136493)
chr1 (205-373)||(11348843-11349030)
chr1 (234-312)||(34603737-34603815)
chr1 (246-305)||(37032991-37033050)
chr1 (205-303)||(19754640-19754737)
chr1 (207-298)||(12318452-12318544)
chr1 (206-305)||(42297894-42297996)
chr1 (81-175)||(28318094-28318188)
chr1 (352-424)||(31929344-31929418)
chr1 (46-144)||(22079039-22079137)
chr1 (37-110)||(31928208-31928281)
chr1 (126-206)||(31926010-31926089)
chr1 (206-279)||(2926656-2926730)
chr1 (81-131)||(3331283-3331333)
chr1 (205-296)||(193756-193849)
chr1 (206-282)||(25652231-25652308)
chr1 (206-298)||(6808600-6808692)
chr1 (126-201)||(4535783-4535858)
chr1 (242-305)||(19752865-19752928)
chr1 (316-394)||(34603836-34603914)
chr1 (15-171)||(6068290-6068447)
chr1 (206-290)||(9109355-9109440)
chr1 (339-424)||(41136106-41136190)
chr1 (312-373)||(29136516-29136577)
chr1 (313-373)||(37876604-37876665)
chr1 (206-298)||(49893536-49893629)
chr1 (339-423)||(12318316-12318399)
chr1 (100-144)||(12318846-12318890)
chr1 (246-298)||(41136006-41136057)
[»] chr6 (30 HSPs)
chr6 (15-207)||(3809011-3809204)
chr6 (15-207)||(5043301-5043492)
chr6 (16-207)||(17762661-17762854)
chr6 (23-207)||(21593347-21593531)
chr6 (15-206)||(26800443-26800634)
chr6 (15-207)||(2973242-2973435)
chr6 (40-207)||(603383-603550)
chr6 (206-423)||(26800734-26800969)
chr6 (15-199)||(22425136-22425321)
chr6 (206-312)||(5043774-5043880)
chr6 (15-207)||(26830427-26830619)
chr6 (15-172)||(25072858-25073015)
chr6 (206-295)||(22424758-22424847)
chr6 (73-207)||(17757813-17757949)
chr6 (205-305)||(21589076-21589176)
chr6 (244-429)||(25073760-25073943)
chr6 (207-305)||(17758171-17758270)
chr6 (207-305)||(17763138-17763237)
chr6 (310-424)||(2972720-2972837)
chr6 (205-305)||(26830043-26830146)
chr6 (246-303)||(3808628-3808685)
chr6 (205-305)||(603007-603111)
chr6 (310-373)||(5043895-5043958)
chr6 (205-256)||(21593809-21593860)
chr6 (310-373)||(26829959-26830022)
chr6 (311-373)||(17758292-17758354)
chr6 (311-373)||(17763259-17763321)
chr6 (311-373)||(22424662-22424724)
chr6 (213-305)||(9572745-9572838)
chr6 (206-238)||(12221094-12221126)
[»] scaffold0014 (1 HSPs)
scaffold0014 (15-207)||(80586-80778)
[»] scaffold0236 (1 HSPs)
scaffold0236 (205-424)||(10634-10870)
[»] scaffold0176 (2 HSPs)
scaffold0176 (15-207)||(18304-18495)
scaffold0176 (207-303)||(17927-18024)
[»] scaffold0002 (1 HSPs)
scaffold0002 (9-172)||(490782-490946)
[»] scaffold0197 (2 HSPs)
scaffold0197 (15-207)||(1709-1901)
scaffold0197 (206-295)||(1328-1418)
[»] scaffold0927 (1 HSPs)
scaffold0927 (319-423)||(3377-3484)
[»] scaffold0263 (1 HSPs)
scaffold0263 (86-158)||(5400-5471)


Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-150; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 15 - 343
Target Start/End: Complemental strand, 3000016 - 2999687
Alignment:
Q  15 caaaggagagaacttttaggga-tttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  3000016 caaaggagagaacttttagggaatttagatactaaaggttgagggtctttgggtgatgttcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 2999917  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagttggacc 213  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  2999916 ggttcttgggatatggttggtgtcttttggggaaagattcatggggatgagaaacacatgagtagagagtcaattgtgagcaacttgggcgagtttgacc 2999817  T
Q  214 gaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattatt 313  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2999816 gaactgagtaaacatttcttgatgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttgattatt 2999717  T
Q  314 gttgttgttgcttgttgttatttacttttg 343  Q
    ||||||||||||||||||||||| ||||||    
T  2999716 gttgttgttgcttgttgttattttcttttg 2999687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 205 - 426
Target Start/End: Original strand, 3772337 - 3772574
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||| |||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3772337 agttggaccaaactggataaatatttcttggtggtgttatcttttctctactctctttatcttgtttattctttggttagattgtggttttgctatgcac 3772436  T
Q  305 tagatt----------------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
    | ||||                |||||||||||||||||| ||||||| |||||||| |||  ||| ||||||||| |||||||||||| ||||||||||    
T  3772437 ttgatttctagattaaatctagattgttgttgttgcttgtggttattttcttttggtgattggttgccattgatacctgctccacgaatctaaatttcat 3772536  T
Q  389 taatgtgaaatttggaattgaccgaattcacaacaagt 426  Q
    | ||||||  ||||||||||||||||||||||||||||    
T  3772537 tgatgtgaggtttggaattgaccgaattcacaacaagt 3772574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 39 - 207
Target Start/End: Original strand, 40328476 - 40328644
Alignment:
Q  39 tagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg-atagggttggtgcc 137  Q
    |||||||||||| |||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  40328476 tagatactaaagatttagggtctttgggtgaggttcaaagcttcatgatgtgaatcttggagaaccaaaagagggggttcttgggaaaagggttggtgcc 40328575  T
Q  138 ttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    |||| ||  ||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  40328576 ttttagg-gaagattcatggggatgggaaacacatgagtgtagagtcttttgtgagcaacttgggtgagt 40328644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 11383659 - 11383851
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  11383659 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 11383758  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | | ||| | | ||||||||||||||||| |  ||||||||||||| ||||||| |||| ||| || ||||  |||||||||||||||||||||    
T  11383759 gctattgtgaaaagggttggtgccttttgag-gaagattcatggggttgggaaatacataagtggaaagtcttttgtgagcaacttgggtgagt 11383851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 42435486 - 42435294
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  42435486 caaaggaggaaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 42435387  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | | |||||||| ||||||||  ||||||||||||| ||||||||| |||| | |||||||  |||||||||||||| ||||||    
T  42435386 gctcttgggaaaaaggttggtgacttttggg-gaagattcatggggttgggaaacatatgaatggagagtcttttgtgagcaacttgagtgagt 42435294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 22976207 - 22976389
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||| | ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| |    
T  22976207 caaaggagtgaacttttagagttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggag 22976306  T
Q  115 gttcttgg-gatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaact 198  Q
    | ||||||  | |||||||||||||||||||  ||||||||||||| | | ||||||||||||  |||||| |||||||||||||    
T  22976307 gctcttggaaaaagggttggtgccttttggg-gaagattcatgggg-ttgaaaacacatgagtgaagagtctattgtgagcaact 22976389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 44353468 - 44353657
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | | ||| ||||||||   |||||||||||||| ||||||||||    
T  44353468 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggtttaaaacttcaaga---gaatcttggagaactaaaagagggg 44353564  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||| ||  ||||||||||||| ||| |||||||||||| ||||||||   |||||||||||||||||||    
T  44353565 gctcttgtgaagagggttggtgcctttt-ggagaagattcatggggttggaaaacacatgagtggagagtcatcggtgagcaacttgggtgagt 44353657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 205 - 424
Target Start/End: Original strand, 40221890 - 40222103
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| || | |  ||||||||| |||||| ||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  40221890 agttggaccgaactgggtcaataatctttggtgttgttatcttgtctttactctctttatcttgttcattctttggttggattgtggttttgctatgcac 40221989  T
Q  305 tagattattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttgg 403  Q
           ||||||||| ||||||| ||| ||  | |||||||| ||  ||| ||||||||||| |||||| ||| ||||||||||| ||||||| |||||    
T  40221990 -------ttgttgttgctgcttgtggttaatcaatttttggttgttggttgccattgatactttctccacaaatctaaatttcattgatgtgaagtttgg 40222082  T
Q  404 aattgaccgaattcacaacaa 424  Q
    ||||  |||||||||||||||    
T  40222083 aatttgccgaattcacaacaa 40222103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 4283219 - 4283328
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||    
T  4283219 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtggatcttggagaaccaaaagagggg 4283318  T
Q  115 gttcttggga 124  Q
    | | ||||||    
T  4283319 gcttttggga 4283328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 40221427 - 40221610
Alignment:
Q  24 gaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg 123  Q
    |||||||||||| ||| ||||||||||||  | ||||||||| ||  | | | | |||||||||||||||||| ||||||||||| |||||| |||||||    
T  40221427 gaacttttagggtttttgatactaaaggtggaaggtctttggatgaggtttagaacttcaagatgtgaatcttcgagaaccaaaatagggggctcttggg 40221526  T
Q  124 ataggg-ttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| || |||||||||||| || ||||||||||| |||||||||||||||| |||||||  ||||||||||||| |||||||    
T  40221527 aaaggggttagtgccttttggggaa-gattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttaggtgagt 40221610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 207 - 424
Target Start/End: Original strand, 40328923 - 40329159
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--- 303  Q
    |||||| |||||| || ||||||||||||||||| |||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||       
T  40328923 ttggacggaactgagtgaacatttcttggtgttgttatcttttctctactctccttttcttgtttatcctttggttagattgtggttttgctatgcactt 40329022  T
Q  304 -----ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatta 390  Q
         |||||||        | ||||||| |||||||| ||||||||| ||||||| ||  ||||||||||||||||||| |||||| |||||||||||     
T  40329023 gttttctagattagatctagactgttgttattgcttgtggttatttacatttggttgttggttgtcattgatacttgctctacgaatctaaatttcattg 40329122  T
Q  391 atgtgaaatttggaatt---gaccgaattcacaacaa 424  Q
    ||||||  |||  ||||   |||||||||||||||||    
T  40329123 atgtgaggtttaaaatttgagaccgaattcacaacaa 40329159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 4283669 - 4283769
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  4283669 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcac 4283768  T
Q  305 t 305  Q
    |    
T  4283769 t 4283769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 42435014 - 42434906
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgca 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||  || ||||||| ||||||||||||    
T  42435014 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttctttatcttgtttattccttgctttggattgtggttttgctatgca 42434915  T
Q  304 ctagattat 312  Q
    || ||||||    
T  42434914 cttgattat 42434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 205
Target Start/End: Original strand, 40535538 - 40535713
Alignment:
Q  28 ttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggata 126  Q
    |||||||| ||||||||||||||| || | ||||||||||||||  |||||| |||||| |||| |||||  ||||||||||||||||||||||| || |    
T  40535538 ttttagggtatttagatactaaagattgatggtctttgggtggt--tcaaagtttcaagttgtggatcttttagaaccaaaagagggggttcttgagaaa 40535635  T
Q  127 gggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    |||||| |||||||||| ||||  |||||| |  ||| |||||||||||   |||||| |||||||||||||| |||||    
T  40535636 gggttgatgccttttggataaaagttcatgtgattggaaaacacatgagagaagagtc-attgtgagcaacttaggtga 40535713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 11384130 - 11384230
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttga-tatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||||||| ||||||| |||||||||  ||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  11384130 agttggaccgaactgggtgaacattttttggtgttgtctat-ttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgca 11384228  T
Q  304 ct 305  Q
    ||    
T  11384229 ct 11384230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 10930222 - 10930120
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctcta-ctctctttatcttgtttattctttggttagattgtgattttgctatgc 302  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||| |  ||| |||||||||||||||||||| ||| ||||||| |||||||||||    
T  10930222 agttggaccgaactgggtcaacaatttcttggtgttgttatcttttcttttgctccctttatcttgtttattcttttgttggattgtggttttgctatgc 10930123  T
Q  303 act 305  Q
    |||    
T  10930122 act 10930120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 18655545 - 18655648
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatg 301  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||| ||  ||||||||||||||||||||| |||  || ||||||| ||||||||||    
T  18655545 agttggaccgaactgggtgaacattttttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgctatg 18655644  T
Q  302 cact 305  Q
    ||||    
T  18655645 cact 18655648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 40585397 - 40585590
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||| | ||||||||| | |||||||||||||||||| || |||||||| ||  | ||||||||||||||||||||| || ||||| |||||||| |    
T  40585397 caaaggaaataacttttagagtatttagatactaaaggttaagagtctttggttgaggttcaaagcttcaagatgtgaatatttgagaatcaaaagagtg 40585496  T
Q  114 ggttc-ttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || || || ||| ||||||| || |||||||  | |||||||||||| | | |||||||| |   |||||||  |||||||||| ||||||||||    
T  40585497 ggctcttttggagagggttgatgtcttttggtgagagattcatggggtttgaaaacacatcaaaggagagtc-tttgtgagcaatttgggtgagt 40585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 10240270 - 10240363
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgttta-ttctttggttagattgtgattttgct 298  Q
    |||||| | |||| ||||||||||||||||| ||| | ||||||||  ||||||||||||||||||| || ||||||| ||||||| |||||||    
T  10240270 gttggatcaaactaggtaaacatttcttggttttgttctcttttcttcactctctttatcttgtttatttttttggttcgattgtggttttgct 10240363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 20686552 - 20686456
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagag 111  Q
    |||||||| ||||||| |||| | |||||||||||| ||| ||| ||||||| ||  | ||||||||||||||||||||||||||| |||||||||||    
T  20686552 caaaggagggaactttcagggtacttagatactaaatgttgaggatctttgg-tgaagttcaaagcttcaagatgtgaatcttggataaccaaaagag 20686456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 10101588 - 10101513
Alignment:
Q  81 tcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatg 156  Q
    |||| ||||||| ||||||||||||||||||| || |||||||| ||||||| ||| ||||||| | |||||||||    
T  10101588 tcaaaatgtgaaccttggagaaccaaaagaggaggctcttgggaaagggttgctgcattttgggaagagattcatg 10101513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 424
Target Start/End: Original strand, 10240423 - 10240489
Alignment:
Q  357 attgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 424  Q
    ||||||| ||||||||| |||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  10240423 attgatatttgctccacaaatttaaattacattgatgtgaaatttggagtt-accgaattcacaacaa 10240489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 3846254 - 3846153
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    |||||| ||||  |||||||||||| |||||||||||| | | | ||||| | || ||||||| |||||||| | |||||||||||| ||||||||||||    
T  3846254 tcaaaggttcataatgtgaatcttgaagaaccaaaagaagagct-cttggaaaagagttggtgtcttttggggagagattcatggggttgggaaacacat 3846156  T
Q  173 gag 175  Q
    |||    
T  3846155 gag 3846153  T

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Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 11137213 - 11137262
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  11137213 ttttctctactctctttatcttgtttattcattggttcgattgtggtttt 11137262  T

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Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 9633590 - 9633546
Alignment:
Q  251 tctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  9633590 tctactctctttatcttgtttattctttggttcaattgtgatttt 9633546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 18655669 - 18655732
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| ||||||||  |||||||| ||||||||||  |||||||||||| |||||||||    
T  18655669 tattgttgttattgcttgtgtttatttacatttggttattggttgtcattgatatttgctccac 18655732  T

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Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 40873414 - 40873504
Alignment:
Q  83 aagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatga 174  Q
    |||||||||||||| | ||||||| ||||| | ||||||| | | |||| ||||||||||||||  ||||||||||| | ||||||||||||    
T  40873414 aagatgtgaatcttagggaaccaagagaggagattcttggaaaaaggttagtgccttttgggtagggattcatgggggt-ggaaacacatga 40873504  T

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Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 10020179 - 10020229
Alignment:
Q  81 tcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggtt 131  Q
    |||| ||||||||||| |||||||||||||||||| |||||||| ||||||    
T  10020179 tcaatatgtgaatcttagagaaccaaaagagggggctcttgggaaagggtt 10020229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Original strand, 28461305 - 28461375
Alignment:
Q  86 atgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatg 156  Q
    |||||||||||||||||||||||||||  | |||| ||| | ||||||| ||||||||| | |||||||||    
T  28461305 atgtgaatcttggagaaccaaaagaggaagctcttaggaaatggttggttccttttggggatagattcatg 28461375  T

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Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 4283328 - 4283389
Alignment:
Q  146 aaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    |||||||||||||| |||||||||||||||| || ||||  ||||||| ||||||| |||||    
T  4283328 aaagattcatggggttgggaaacacatgagtggaaagtcttttgtgagaaacttggttgagt 4283389  T

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Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 9633918 - 9633842
Alignment:
Q  128 ggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    ||||||| ||||||||| | ||||| |||||| ||| |||||||| ||  |||||||| |||||||||||||||||||    
T  9633918 ggttggtaccttttggg-agagattaatggggttggtaaacacataagatgagagtcatttgtgagcaacttgggtga 9633842  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 15691105 - 15691163
Alignment:
Q  361 atacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcaca 420  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| || ||||||||||||    
T  15691105 atacttgctccacgaatctaaatttcattgatgtgaggtttggagtt-accgaattcaca 15691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 3817771 - 3817670
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagg--gggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacac 170  Q
    |||||| || |||||| || ||||| ||||||||||||    ||| |||||| | ||||||||||||||||||  |||||||||||||| ||| ||| ||    
T  3817771 tcaaaggttgaagatgggattcttgaagaaccaaaagaattagggctcttggaaaagggttggtgccttttggagaaagattcatggggttggaaaatac 3817672  T
Q  171 at 172  Q
    ||    
T  3817671 at 3817670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 1292487 - 1292454
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||| ||||||||||||||||    
T  1292487 agttggaccgaactgggcaaacatttcttggtgt 1292454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 10015224 - 10015257
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    |||||||||||||||||||| |||||||||||||    
T  10015224 agttggaccgaactgggtaatcatttcttggtgt 10015257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 1e-64; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 8665080 - 8665272
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  8665080 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 8665179  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| ||||||||||| |||| |||||||  |||||||||||||||||||||    
T  8665180 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacaggagtggagagtcttttgtgagcaacttgggtgagt 8665272  T

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Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 6655629 - 6655821
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||| ||||||||||||||||||||||||||||||||    
T  6655629 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaaactttaagatgtgaatcttggagaaccaaaagagggg 6655728  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| |||| |||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||||    
T  6655729 gctcttggggaaagggttggtgcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcatttctgagcaacttgggtgagt 6655821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 55085861 - 55085668
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagctt-caagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | | ||||||| |||||||| |||||||||||||||||||||||    
T  55085861 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttaaaagctttcaagatgtaaatcttggagaaccaaaagaggg 55085762  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | ||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||    
T  55085761 ggctcttggggaaagggttggtgccttttggggaa-gattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttgtgtgagt 55085668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 26363942 - 26364130
Alignment:
Q  19 ggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttc 118  Q
    |||| |||||||||||| ||||||||||||||||| |||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||| ||    
T  26363942 ggagggaacttttagggttttagatactaaaggttgagggcctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggggctc 26364041  T
Q  119 ttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||| | | |||||||| ||||||| ||  ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  26364042 ttgtgaaaagggttggggcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 26364130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 33989535 - 33989727
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||| ||| ||||||||||| ||||||||||||||| || ||||||||||||||  | ||||||||||||||||||||||||| |||||||||| ||||    
T  33989535 caaagcagataacttttagggtatttagatactaaagtttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttgaagaaccaaaataggg 33989634  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || |||||||| | ||||||||||||||||| | |||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||    
T  33989635 ggctcttgggagaaggttggtgccttttggg-agagattcatgggattgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 33989727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 46703174 - 46703365
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| ||||| |||||||||||    
T  46703174 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttcgagaatcaaaagagggg 46703273  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||||||||||| |||||| | |||||||  |||| ||||||||||||||||    
T  46703274 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggatgggaaa-acatgaatggagagtcttttgtcagcaacttgggtgagt 46703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 40630667 - 40630849
Alignment:
Q  25 aacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttg-gg 123  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| | | ||| |     
T  40630667 aacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggagcttttgtga 40630766  T
Q  124 atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  40630767 aaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 40630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 41964089 - 41964280
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| || ||||||||||||||| ||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||    
T  41964089 caaaggagggaacttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcatgatgtgaatcttggagaaccaaaagaggg 41964188  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||| ||  |||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  41964189 ggctcttgggaaaagggttagt--cttttggg-aaagattcatggggttgggaaacacatgagtagagagtcttttgtgagcaacttgggtgagt 41964280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 50674341 - 50674149
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||| |||||||| ||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  50674341 caaaggagggaacttttagggttttaaatactaaatgttaagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 50674242  T
Q  115 gttct-tgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||   | | |||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  50674241 gctctaatgaaaagggttggtgccttatggg-aaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 50674149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 50263193 - 50263011
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||||| |||||||||| || |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  50263193 caaaggagggaacttttagggttttagacactaaaggttgagagtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 50263094  T
Q  115 gttcttgg-gatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaac 197  Q
    | ||||||  | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||    
T  50263093 gctcttggaaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaac 50263011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 379051 - 379244
Alignment:
Q  15 caaaggagagaacttttagggatt-tagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||||||||||||||  || ||||||||||||||| |||| |||||||||  | ||||||||||| |||||||||||||||||||||||||||||    
T  379051 caaaggagagaacttttaggatttgtagatactaaaggttgagggactttgggtgaggttcaaagcttcatgatgtgaatcttggagaaccaaaagaggg 379150  T
Q  114 ggttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||| | | ||||| |||||||||||||  |||||||||| | ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  379151 ggctcttgtgaaaagggtcggtgccttttggg-gaagattcatgagaatgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 379244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 54882693 - 54882885
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||    
T  54882693 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaaaatgtgaatcttggagaaccaaaagagggg 54882792  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||  | | |||||||||||||||| ||  ||||||||||||| ||||||||||||||||  ||||||  ||||||| |||||||||||||    
T  54882793 gctcttatgaaaagggttggtgcctttt-ggagaagattcatggggttgggaaacacatgagtgtagagtcttttgtgagaaacttgggtgagt 54882885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 12073066 - 12073257
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||  |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||| |||||||||||||||||||| |||    
T  12073066 caaaggatggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtaaatcttggagaaccaaaaga-ggg 12073164  T
Q  115 gttcttggg--atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||  | |||||||||||||||||||  ||||||||||||| ||| ||||||||||||  ||||||  |||||||||||||||||||||    
T  12073165 gctcttgggaaaaagggttggtgccttttggg--aagattcatggggttggaaaacacatgagtgaagagtcttttgtgagcaacttgggtgagt 12073257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 2209378 - 2209552
Alignment:
Q  12 aagcaaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagag 111  Q
    ||||||| ||| |||||||||||| |||||||||||||| || ||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||    
T  2209378 aagcaaatgagggaacttttagggttttagatactaaagattgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaacgag 2209477  T
Q  112 ggggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaa 186  Q
    |||  ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  2209478 gggactcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcaa 2209552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 27417446 - 27417277
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||| |||||||||||||||||||||||||||| |||    
T  27417446 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagctttaagatgtgaatcttggagaaccaaaagaaggg 27417347  T
Q  115 gttcttgggata-gggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtc 184  Q
    | |||||||| | ||||||||| ||||||||  ||||||||||||| |||||||||||||||| |||||||    
T  27417346 gctcttgggaaaggggttggtgtcttttggg-gaagattcatggggttgggaaacacatgagtggagagtc 27417277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 35662115 - 35662307
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||| |||||||||||||||  ||||||||||||||||| || |||||||||||  | |||||||||||| |||||||||||||||||||||||||||||    
T  35662115 caaatgagagaacttttaggattttagatactaaaggttgagagtctttgggtgaggttcaaagcttcaatatgtgaatcttggagaaccaaaagagggg 35662214  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| || | |||||||||||||||||||  ||||||||||||| ||| |||||||||| | ||||||   |||||||||||||||||||||    
T  35662215 gctcttaggaaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgaatggagagttctttgtgagcaacttgggtgagt 35662307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 33089582 - 33089759
Alignment:
Q  25 aacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggga 124  Q
    |||||||||| ||||||||||||||| || ||||||||||||||  | |||||| || |||||||||||||||||||| |||||||||||| ||||||||    
T  33089582 aacttttaggtatttagatactaaagattgagggtctttgggtgaggttcaaagtttgaagatgtgaatcttggagaatcaaaagagggggctcttggga 33089681  T
Q  125 tagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttggg 202  Q
     |||||||||| |||||||  | ||||||||||||  |  |||||||||||| |||||||| ||||||||||||||||    
T  33089682 gagggttggtgtcttttggagagagattcatggggtcgaaaaacacatgagtggagagtcatttgtgagcaacttggg 33089759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 8647869 - 8648003
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacaca 171  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||    
T  8647869 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacaca 8647967  T
Q  172 tgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     |||| |||||||  |||||||||||||||||||||    
T  8647968 ggagtggagagtcttttgtgagcaacttgggtgagt 8648003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 46570041 - 46569851
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||| |||||||| ||||||||||||| ||| | ||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  46570041 caaaggagggaaattttagggttttagatactaaatgttgaaggtctttaggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 46569942  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    | ||||| | | ||| ||||||||||||||| |||||||||||||| ||||||||| |||||| || ||||  |||||| |||||| |||||    
T  46569941 gctcttgtgaaaaggattggtgccttttggg-aaagattcatggggttgggaaacaaatgagtggaaagtcttttgtgaacaacttaggtga 46569851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 206 - 424
Target Start/End: Original strand, 379527 - 379764
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  379527 gttggaccgaactggatgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgttatgcact 379626  T
Q  306 agat----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
     | |                |||||||||||||| |||| ||||||||| |||| |||||  ||| || ||||||||||||||||||| |||||||||||    
T  379627 tggtttatagactaggtctatattgttgttgttgtttgtggttatttacatttgattattggttgccactgatacttgctccacgaatctaaatttcatt 379726  T
Q  390 aatgtgaaatttggaatt---gaccgaattcacaacaa 424  Q
     ||||||  |||||||||   |||||||||||||||||    
T  379727 gatgtgaggtttggaatttgagaccgaattcacaacaa 379764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 8653273 - 8653382
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  8653273 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 8653372  T
Q  115 gttcttggga 124  Q
    | ||||||||    
T  8653373 gctcttggga 8653382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 205 - 421
Target Start/End: Original strand, 41964561 - 41964794
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca- 303  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||| |||||||  |||||||||||| |||||||||||||||| ||||||||||||     
T  41964561 agttggaccgaactgggtgagcatttcttggtgttgttatcttttctttactctc--tatcttgtttatcctttggttagattgtggttttgctatgcac 41964658  T
Q  304 -------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
           |||||||        ||||||||| |||||||| ||||||||| |||| || ||  ||| |||||||||||||||||||||| ||||||||||    
T  41964659 ttgttttctagattagatctagattgttgttattgcttgtggttatttacatttgattgttggttgccattgatacttgctccacgaatctaaatttcat 41964758  T
Q  389 taatgtgaaatttggaatt---gaccgaattcacaa 421  Q
    | ||||||  |||||||||   ||||||||||||||    
T  41964759 tgatgtgaggtttggaatttgagaccgaattcacaa 41964794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 206 - 424
Target Start/End: Original strand, 12073539 - 12073774
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca-- 303  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||      
T  12073539 gttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttagattgtggttttgttatgcact 12073638  T
Q  304 ------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
          |||||||        |||||||||||||||||| |||  || |  |||||| || |||| |||||||||||||||||| |||||||||||||||    
T  12073639 tggtttctagattagatctagattgttgttgttgcttgtggtttattcc--ttggttgtttattgccattgatacttgctccacaaatttaaatttcatt 12073736  T
Q  390 aatgtgaaatttggaatt---gaccgaattcacaacaa 424  Q
      |||||  |||| ||||   |||||||||||||||||    
T  12073737 ggtgtgaggtttgaaatttgagaccgaattcacaacaa 12073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 38811573 - 38811400
Alignment:
Q  16 aaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||| |||||||||||| | |||||||||||||||| ||||| ||||||||  | ||||||||| |||||||||||||||||||||| ||||| |||    
T  38811573 aaaggagggaacttttagggtacttagatactaaaggttgagggtatttgggtgaggttcaaagctttaagatgtgaatcttggagaacccaaaga-ggg 38811475  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattg 189  Q
    | |||||||| |||||||||| |||||| | | ||||||||| || | |||||||||| ||| ||||||||||||    
T  38811474 gctcttgggaaagggttggtgtcttttgcggagagattcatgaggttaggaaacacataagtggagagtcaattg 38811400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 423
Target Start/End: Original strand, 8665553 - 8665787
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||| |||| |||  |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||||||     
T  8665553 agttggaccaaactaggtgtacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcat 8665652  T
Q  305 tagat-------------tattgttgttgttgcttgttgttatt---tacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
    | |||             ||||||||||||||||||| |||| |   |  |||||||| ||  ||| ||||||||||||||| |||||| ||||||||||    
T  8665653 ttgattatagatagactatattgttgttgttgcttgtggttaatcaatttttttggttgttggttgccattgatacttgctcgacgaatctaaatttcat 8665752  T
Q  389 taatgtgaaatttggaattgaccgaattcacaaca 423  Q
    | | ||||| |||| ||||||||||||||||||||    
T  8665753 tgaagtgaagtttgaaattgaccgaattcacaaca 8665787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 423
Target Start/End: Original strand, 35662586 - 35662816
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||  | ||||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  35662586 agttggaccgaactgaatgaacattttttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcac 35662685  T
Q  305 tagat----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
    | | |                ||||||||||||||||| | |    ||| |||||||| ||  ||| |||||||||||||||||| ||| ||||||||||    
T  35662686 ttggtttatagactatgtctatattgttgttgttgcttatgg----ttaattttggttgttggttgccattgatacttgctccacaaatctaaatttcat 35662781  T
Q  389 taatgtgaaatttggaattgaccgaattcacaaca 423  Q
    | ||||||| |||||||||||||||||||||||||    
T  35662782 tgatgtgaagtttggaattgaccgaattcacaaca 35662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 35370833 - 35370705
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaacc-aaaagagg 112  Q
    |||||||| ||||||||| || |||||||||||||||||| |||||||||||| |  | ||||||||| |||||||||||||||||||||| ||||||||    
T  35370833 caaaggagggaacttttaaggtatttagatactaaaggttgagggtctttgggagaggttcaaagctttaagatgtgaatcttggagaacctaaaagagg 35370734  T
Q  113 gggttcttgggatagggttggtgcctttt 141  Q
    |||||||||||| ||||||||| ||||||    
T  35370733 gggttcttgggagagggttggtccctttt 35370705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 8648284 - 8648391
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||||||     
T  8648284 agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcat 8648383  T
Q  305 tagattat 312  Q
    | ||||||    
T  8648384 ttgattat 8648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 10071558 - 10071664
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||||||||| || ||||||||||||||||| ||||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||    
T  10071558 caaaggagggaacttttaaggttttagatactaaaggttgagggtctttgggtgaggttcaaagctttaagatgtgaatcttggagaaccaaaagagggg 10071657  T
Q  115 gttcttg 121  Q
    | |||||    
T  10071658 gctcttg 10071664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 6656101 - 6656201
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||| ||||||| |||||||||||||    
T  6656101 agttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgcac 6656200  T
Q  305 t 305  Q
    |    
T  6656201 t 6656201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 36 - 207
Target Start/End: Complemental strand, 35369913 - 35369742
Alignment:
Q  36 atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaacc-aaaagagggggttcttgggatagggttggt 134  Q
    |||||||||||||||||| ||||||||||||||  | |||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  35369913 atttagatactaaaggttgagggtctttgggtgaggttcaaagatttaagatgtgaatcttggagaacctaaaagagggggttcttgggagagggttggt 35369814  T
Q  135 gccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     |||||| |  | ||||||||| || |  ||||||||| |  ||| ||||  |||| ||||||||||||||||    
T  35369813 cccttttcgaaagagattcatgaggtttagaaacacatcaaaagatagtc-tttgtaagcaacttgggtgagt 35369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 40632590 - 40632690
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||||||||  |||||| |||||| ||||||    
T  40632590 agttggaccgaactgggtaaacatttcttggtgttgttatcttttttttactctctttatcttgtttatcctttggttgaattgtggttttgccatgcac 40632689  T
Q  305 t 305  Q
    |    
T  40632690 t 40632690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 41639571 - 41639678
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||||||||| || ||||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  41639571 agttggaccgaactgagtgaacatttcttggtgttgttatcgtttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcac 41639670  T
Q  305 tagattat 312  Q
    | ||||||    
T  41639671 ttgattat 41639678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 423
Target Start/End: Original strand, 26364381 - 26364616
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||| ||| ||||||||| |||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||| || ||||||| ||||||||| ||    
T  26364381 agtttgactgaactgggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgcttggattgtggttttgctataca 26364480  T
Q  304 ctagat-----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttc 386  Q
    ||  ||                 ||||||||||||||||||| ||||   | ||||  || || ||||||||||||||||||||||||||| ||||||||    
T  26364481 cttaattatagactaggtctatatattgttgttgttgcttgtagtta-acattttttattgttgattgtcattgatacttgctccacgaatctaaatttc 26364579  T
Q  387 attaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    ||| |||| || ||||||||||||||| |||||||||    
T  26364580 attgatgtaaagtttggaattgaccgagttcacaaca 26364616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 46703648 - 46703740
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  46703648 gttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcatttggttagattgtggttttgct 46703740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 50673870 - 50673762
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgca 303  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||  || ||||||| ||||||||||||    
T  50673870 agttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattgtggttttgctatgca 50673771  T
Q  304 ctagattat 312  Q
    || ||||||    
T  50673770 cttgattat 50673762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 54881595 - 54881680
Alignment:
Q  339 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 424  Q
    |||||||| ||  |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  54881595 ttttggttgttggttgtcattgatacttgctccacgaatataaatttcattgatgtgaagtttggaattgaccgaattcacaacaa 54881680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 10071966 - 10072050
Alignment:
Q  37 tttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttg 121  Q
    ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10071966 tttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaactaaaagagggggctcttg 10072050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 423
Target Start/End: Complemental strand, 55085439 - 55085235
Alignment:
Q  230 tcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt----------------att 313  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| | ||                |||    
T  55085439 tcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatctagatt 55085340  T
Q  314 gttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccga 413  Q
    |||||| |||||||| ||||      |||| || ||  ||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||| |    
T  55085339 gttgttattgcttgtagtta-----atttgattgttggttgtcattgatacttgctccatgaatctaaatttcattgatgtgaagtttggaattgaccaa 55085245  T
Q  414 attcacaaca 423  Q
    ||||||||||    
T  55085244 attcacaaca 55085235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 26699463 - 26699364
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||||||||||| ||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||  ||| || ||||||||||||||    
T  26699463 gttggaccgaactgggtaaaaatttcttagtgccgttatcttttctttactctctttatcttgtttattctttggttcaattatggttttgctatgcact 26699364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 27416988 - 27416888
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||||||||| || |||| |  ||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||||    
T  27416988 agttggaccgaactgagtcaacaatctttggtgttgttatcttgtctttactctctttatcttgtttattctttggttggattgtggttttgccatgcac 27416889  T
Q  305 t 305  Q
    |    
T  27416888 t 27416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 214 - 305
Target Start/End: Original strand, 33990000 - 33990091
Alignment:
Q  214 gaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||  ||| ||  |||||||||||||    
T  33990000 gaactgggtaaacatttcttggtgttattatattttttctactctctttatcttgtttattctttggttcaattctggatttgctatgcact 33990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 22883248 - 22883090
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| ||| ||| |||||||| |||||||||||||||||| ||  | |||| |||  | ||||||||||||||||||||||||||||||| |||||||||    
T  22883248 caaatgagggaaattttagggtatttagatactaaaggttgagactatttgagtgaggttcaaagcttcaagatgtgaatcttggagaacaaaaagaggg 22883149  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    || |||||||| |||| || | ||||||||  | ||| |||| ||| | ||||||||||    
T  22883148 ggctcttgggagagggctgataccttttggagagagactcatagggttaggaaacacat 22883090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 22934912 - 22934754
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| ||| ||| |||||||| |||||||||||||||||| ||  | |||| |||  | ||||||||||||||||||||||||||||||| |||||||||    
T  22934912 caaatgagggaaattttagggtatttagatactaaaggttgagactatttgagtgaggttcaaagcttcaagatgtgaatcttggagaacaaaaagaggg 22934813  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    || |||||||| |||| || | ||||||||  | ||| |||| ||| | ||||||||||    
T  22934812 ggctcttgggagagggctgataccttttggagagagactcatagggttaggaaacacat 22934754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 2209861 - 2209964
Alignment:
Q  206 gttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||||| |||| | ||||||||||| | |||   |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  2209861 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttgctatg 2209960  T
Q  302 cact 305  Q
    ||||    
T  2209961 cact 2209964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 3785822 - 3785891
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttg 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||    
T  3785822 tcaaagcttcaagatgtgaatcttgaagaaccaaaagagggggctcttggaaaagggttggtgccttttg 3785891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 54883165 - 54883265
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatctttt-ctctactctctttatcttgtttattctttggttagattgtgattttgctatgc 302  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||  |||||| ||||||| |||    
T  54883165 agttggaccgaactgggtcaacaatttcttggtgttgttatctttttctttactctctttatcttatttattctttggttgaattgtggttttgctctgc 54883264  T
Q  303 a 303  Q
    |    
T  54883265 a 54883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 407
Target Start/End: Original strand, 46703742 - 46703912
Alignment:
Q  253 tactctctttatcttgtttattctttggttagattgtgattttgctatgcactagat-----------------tattgttgttgttgcttgttgttatt 335  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||                 ||||||||||||||||||  ||||||    
T  46703742 tactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgattatagaataggtctatatattgttgttgttgcttgaggttatt 46703841  T
Q  336 tacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt 407  Q
    ||| ||||||||||  |||| |||||||||| |||||||||| |||| ||| || ||||||| |||||||||    
T  46703842 tacatttggttattggttgttattgatacttactccacgaatctaaa-ttctttgatgtgaagtttggaatt 46703912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 12119686 - 12119790
Alignment:
Q  206 gttggaccgaactgggtaaaca-tttcttggtgttgatatct----tttctctactctctttatcttgtttattctttggttagattgtgattttgctat 300  Q
    ||||||||||||| ||| |||| |||||||||||||  ||||    |||||||||||||||||||||||||| ||||||||  ||||||| |||||||||    
T  12119686 gttggaccgaactaggtgaacaatttcttggtgttgtcatctattttttctctactctctttatcttgtttagtctttggtccgattgtggttttgctat 12119785  T
Q  301 gcact 305  Q
    |||||    
T  12119786 gcact 12119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 423
Target Start/End: Original strand, 8648410 - 8648526
Alignment:
Q  310 tattgttgttgttgcttgttgttatttactttt---ggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaat 406  Q
    ||||||||||||||||||| |||| | | ||||   |||| ||  ||| ||||||||||||||| |||||| ||||||||||| | ||||| |||| |||    
T  8648410 tattgttgttgttgcttgtggttaatcaatttttttggttgttggttgccattgatacttgctcgacgaatctaaatttcattgaagtgaagtttgtaat 8648509  T
Q  407 tgaccgaattcacaaca 423  Q
    |||||||||||||||||    
T  8648510 tgaccgaattcacaaca 8648526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 34112357 - 34112471
Alignment:
Q  87 tgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaa 186  Q
    ||||||||||||| |||| ||||| | || |||| | | ||||||||||||||||||| | || |||| |||| ||| |||||||||||| ||||||||     
T  34112357 tgtgaatcttggataacctaaagacgaggctcttagaaaagggttggtgccttttggggagaggttcacggggttggaaaacacatgagtggagagtcat 34112456  T
Q  187 ttgtgagcaacttgg 201  Q
     ||||||||||||||    
T  34112457 ctgtgagcaacttgg 34112471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 38811212 - 38811143
Alignment:
Q  206 gttggaccgaactgggtaaacatttctt-ggtgttgatatcttttctctactctctttatcttgtttatt 274  Q
    |||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||| |||||||||    
T  38811212 gttggaccgaactgggtaaacaattcttcggtgttgttctcttttctctactctctttatattgtttatt 38811143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 296
Target Start/End: Original strand, 3786135 - 3786199
Alignment:
Q  232 ttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttg 296  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  3786135 ttggtgttgttctcttttctctactctctttatcttgttcattctttggttcgattgtaattttg 3786199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 423
Target Start/End: Original strand, 33090065 - 33090243
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat-----tgttgttgttgcttgttgttatttac 338  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||| | |||| |  | |     |||||||||||||  | ||||         
T  33090065 tcttttctctgctctctttatcttgtttattttttggttcgattgtggttttgctttacacttggatctagatatgttgttgttgctcttggtta----- 33090159  T
Q  339 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    ||| ||||||| |||||||||||||||| | |||| |||  |||||||||| |||||| ||||||| || |||||||||||||||    
T  33090160 tttcggttattgattgtcattgatacttcccccacaaatcaaaatttcattgatgtgagatttggagtt-accgaattcacaaca 33090243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 22882773 - 22882703
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttg 279  Q
    ||||||||||||||| |||||||||||||||||   ||| |||||| ||||||||||||||| |||||||||||    
T  22882773 gttggaccgaactggataaacatttcttggtgt---tattttttctatactctctttatcttatttattctttg 22882703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 22934437 - 22934367
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttg 279  Q
    ||||||||||||||| |||||||||||||||||   ||| |||||| ||||||||||||||| |||||||||||    
T  22934437 gttggaccgaactggataaacatttcttggtgt---tattttttctatactctctttatcttatttattctttg 22934367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 47514997 - 47514834
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| ||| |||||||||||| | ||| | |||||||||| | |||||| |||||  | ||||||||||||||| |||||||||| |||||||||||| |    
T  47514997 caaatgagtgaacttttagggtacttaaacactaaaggttgaaggtcttcgggtgaagttcaaagcttcaagatatgaatcttggtgaaccaaaagagtg 47514898  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagta 177  Q
    |  |||||||| | | ||| || |||||| | |||  | ||| ||| |||||||||||||||||    
T  47514897 gactcttgggaaatgattgatgtcttttgaggaaatgtgcatagggttgggaaacacatgagta 47514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 198
Target Start/End: Complemental strand, 26699943 - 26699757
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaag-agg 112  Q
    |||| ||| |||||| ||||| |||||||||||||||||| | | ||||||| ||  | ||||| |||||||||||||||||| |||| ||||| | |||    
T  26699943 caaatgagggaacttgtagggcatttagatactaaaggttgaagatctttggttgaggttcaaaacttcaagatgtgaatcttagagagccaaatgaagg 26699844  T
Q  113 gggttcttgg-gatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaact 198  Q
    ||| ||||||  | ||||||||||||||||  | | ||||||||||||  |||| | |||||||| |||| ||| | |||| |||||    
T  26699843 gggatcttggaaaaagggttggtgccttttcagaagagattcatggggtcgggagatacatgagtggagattcattagtgaacaact 26699757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 6719259 - 6719384
Alignment:
Q  16 aaaggagagaacttttagggat-ttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||| |  |||||  ||||||||| | ||| || |||||    |||||| |||||||||||||||||||| ||| ||||||| ||    
T  6719259 aaaggagagaacttttaggcaacttagaggctaaaggttgaaggttttagggtgagattcaaaggttcaagatgtgaatcttggaaaactaaaagagtgg 6719358  T
Q  115 gttcttgggatagggttggtgccttt 140  Q
     ||||||||| ||||||| |||||||    
T  6719359 attcttgggaaagggttgatgccttt 6719384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 25723653 - 25723554
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    |||||||||||| |||||||||||||||||||||||||||| | ||||||   | ||||  ||||||||||  | || ||| ||||| ||||||||||||    
T  25723653 tcaaagcttcaaaatgtgaatcttggagaaccaaaagagggagctcttggataatggttaatgccttttggagagagcttcgtggggttgggaaacacat 25723554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 50262722 - 50262613
Alignment:
Q  206 gttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||||| |||| | ||||||||||| | |||   |||||||||||| |||||||||||||||| ||  || ||||||| |||||| |||    
T  50262722 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctttttatcttgtttattccttacttggattgtggttttgccatg 50262623  T
Q  302 cactagatta 311  Q
    |||| |||||    
T  50262622 cacttgatta 50262613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 27416844 - 27416791
Alignment:
Q  370 ccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  27416844 ccacgaatctaaattttattgatgtgaagtttggaattgaccgaattcacaaca 27416791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 12119281 - 12119401
Alignment:
Q  83 aagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgcc-ttttgggtaaagattcatggggatgggaaacacatgagtagaga 181  Q
    ||||| ||||||||||||||  |||| ||||   |||||||| ||||||||| || |||||||  ||||||||||||| || ||||||||| ||| | ||    
T  12119281 aagatatgaatcttggagaattaaaaaagggaactcttgggaaagggttggttcccttttggg--aagattcatggggttgcgaaacacattagtggtga 12119378  T
Q  182 gtcaattgtgagcaacttgggtg 204  Q
     ||| |||||||||| |||||||    
T  12119379 atcatttgtgagcaatttgggtg 12119401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 2209986 - 2210048
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||| ||| |||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  2209986 attgttgttattgtttgtggttatttacatttggttattggttgccattgatacttgctccac 2210048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 6542202 - 6542169
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||||||||||||||||||||    
T  6542202 agttggaccgaactgggtaaacatttcttggtgt 6542169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 22629384 - 22629223
Alignment:
Q  15 caaaggagagaacttttaggga-tttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| ||| ||||||||||| | |||||| |||||||||| || |||| ||||||    | |||  ||||||||||||||||||||||||||||| |||     
T  22629384 caaatgagtgaacttttaggaaatttagaaactaaaggttcagtgtctctgggtgagatttaaaagttcaagatgtgaatcttggagaaccaaaatagga 22629285  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgag 175  Q
    |  | |||  | | |||| |||||||||||| | | ||| |||||| || ||||||||||||    
T  22629284 gaatattgaaaaatggttagtgccttttgggaagatatttatggggttgagaaacacatgag 22629223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 24969810 - 24969843
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||||||||||||||||||||    
T  24969810 agttggaccgaactgggtaaacatttcttggtgt 24969843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 34112999 - 34113034
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttg 279  Q
    |||||||||||||| |||||||||||||||||||||    
T  34112999 tcttttctctactcactttatcttgtttattctttg 34113034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 50262597 - 50262534
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||||||||||||| |||| ||  ||||| || ||  ||||||||||||||||||||||    
T  50262597 tattgttgttgttgcttgtggttaattttttttgcttgttggttgtcattgatacttgctccac 50262534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 50673749 - 50673686
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||| | || |||||| ||||||||||  ||| ||||||||||||||||||    
T  50673749 tattgttgttattgcttatggtgatttacatttggttattggttgacattgatacttgctccac 50673686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 41961152 - 41961237
Alignment:
Q  86 atgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    |||||||||||| |||||| ||| |||||| ||| |||| | ||| ||||| ||||||| | |||||||| ||| ||||||||||||    
T  41961152 atgtgaatcttgtagaaccgaaaaagggggctctagggagaaggtcggtgctttttggggagagattcat-gggttgggaaacacat 41961237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 6199842 - 6199805
Alignment:
Q  253 tactctctttatcttgtttattctttggttagattgtg 290  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  6199842 tactctctttatcttgtttgttctttggttcgattgtg 6199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 389
Target Start/End: Original strand, 12119856 - 12119893
Alignment:
Q  352 ttgtcattgatacttgctccacgaatttaaatttcatt 389  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  12119856 ttgtcattgatacttgctccatgaatctaaatttcatt 12119893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 31474296 - 31474329
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    |||||||||||||||||||||||| |||||||||    
T  31474296 agttggaccgaactgggtaaacatatcttggtgt 31474329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 32091628 - 32091677
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    |||||||||| |||||||||||||||||||||| |||  |||||| ||||    
T  32091628 ttttctctacgctctttatcttgtttattctttagttcaattgtggtttt 32091677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 40632711 - 40632772
Alignment:
Q  310 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctc 370  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| |||||||||||||||    
T  40632711 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctc 40632772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 43135899 - 43135811
Alignment:
Q  55 agggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttggg 144  Q
    |||||||||||||| || | ||||  || | ||||||||| ||| ||||||||||| |||| ||||| || |||||||||| ||||||||    
T  43135899 agggtctttgggtgatgtttaaagtgtccaaatgtgaatcatggtgaaccaaaaga-ggggctcttgagagagggttggtgtcttttggg 43135811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 51337209 - 51337242
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||||||||||||| ||||||    
T  51337209 agttggaccgaactgggtaaacatttcgtggtgt 51337242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 32091270 - 32091326
Alignment:
Q  41 gatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttg 97  Q
    ||||||||| ||| |||||||||| |||  | ||||| |||||||||||||||||||    
T  32091270 gatactaaatgttgagggtctttgagtgaggttcaaaacttcaagatgtgaatcttg 32091326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 41961690 - 41961746
Alignment:
Q  339 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtg 395  Q
    |||||||||||  ||||||||||||||||| ||||  || ||||||||||| |||||    
T  41961690 ttttggttattggttgtcattgatacttgccccacagatctaaatttcattgatgtg 41961746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 4512884 - 4512693
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||    
T  4512884 caaaggagggaacttttagggttttagattctaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttagagaaccaaaagagggg 4512785  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| |||||||||||||||||||  ||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||    
T  4512784 gctcttgggaaagggttggtgccttttggg-gaagattcatggggtttggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 4512693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 6431644 - 6431836
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||    
T  6431644 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaaacttcaagatgtgaatcttggagaaccaaaagagggg 6431743  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| |||| |||||||||||||||||||  ||||||||||||| ||| ||||||||||||  ||||||  |||||||||||||||||||||    
T  6431744 gctcttggggaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtgtagagtcttttgtgagcaacttgggtgagt 6431836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 29608414 - 29608601
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||    
T  29608414 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaaacttcaagatgtgaatcttggagaaccaaaagagggg 29608513  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||      ||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  29608514 gctcttgtgaaaagggttggtgccttttg------gattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 29608601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 34311212 - 34311019
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||  |||||||||||| || ||||||||||||||| |||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  34311212 caaaggaaggaacttttagggtatgtagatactaaaggttgagggtccttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 34311113  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||||||||||||||||  ||| ||||||||||||| |||||||||||| |||||||  |||||||||||||||||||||    
T  34311112 ggctcttgggaaaagggttggtgccttttggg-gaaggttcatggggatggaaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 34311019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 2389955 - 2390147
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||| ||||||||||||||    
T  2389955 caaaggaggaaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggaaaaccaaaagagggg 2390054  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | | ||| | | |||||||||| ||||||||  ||||||||||||| ||| |||||||||||| || ||||  |||||||||||||||||||||    
T  2390055 gctattgcgaaaagggttggtggcttttggg-gaagattcatggggttggaaaacacatgagtggatagtcttttgtgagcaacttgggtgagt 2390147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 22269647 - 22269838
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||| ||||||| || |||||||||||| || ||||||||||||||  | |||||||| ||||||||||||||||||||||||||||| ||    
T  22269647 caaaggagggaacatttagggtatgtagatactaaagtttgagggtctttgggtgaggttcaaagctacaagatgtgaatcttggagaaccaaaaga-gg 22269745  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || |||||||| || ||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||| |||| ||| |||||||||||||    
T  22269746 ggctcttgggaaagagttggtgccttttggg-gaagattcatggggaggggaaacacatgagtggagagtctattgagagaaacttgggtgagt 22269838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 22328895 - 22328703
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||| |||||||  |  | | ||||||||||||||| |||||||||||||||||||||||    
T  22328895 caaaggagaaaacttttagggtatttagatactaaaggttgaggatctttggtggaggttaaaagcttcaagatgtaaatcttggagaaccaaaagaggg 22328796  T
Q  114 ggttcttgggatagg-gttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    || |||| ||| | | |||||||||||||||| | |||||||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  22328795 ggctcttaggaaaagagttggtgccttttggggagagattcatagggttgggaaaaacatgagtagagagtcatttgtgagcaacttgggtga 22328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 3258671 - 3258861
Alignment:
Q  18 aggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggt 116  Q
    ||||| |||||||||||| || ||||||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||||||| |||||| ||||     
T  3258671 aggagggaacttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcatgatgtgaatcttggagaacaaaaagatggggc 3258770  T
Q  117 tcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||||||| | |||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||  || | ||||||||||||||||    
T  3258771 tcttgggaaaagggttggtgccttttggg-gaagattcatggggatgggaaacatatgagtggagagtcttttattagcaacttgggtgagt 3258861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 4509192 - 4509009
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||  |||||||||||| ||||||||||||||||| ||||| ||||||||  | |||||||||||||||||||        ||||||||||||||     
T  4509192 caaaggatggaacttttagggttttagatactaaaggttgagggtttttgggtgaggttcaaagcttcaagatgtga--------gaaccaaaagaggga 4509101  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||    
T  4509100 gctcttgggaaagggttggtgccttttggggaa-gattcatggggttgggaaacacatgagtggagagtcatttgtgagcaactttggtgagt 4509009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 4511034 - 4510851
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||  |||||||||||| ||||||||||||||||| ||||| ||||||||  | |||||||||||||||||||        ||||||||||||||     
T  4511034 caaaggatggaacttttagggttttagatactaaaggttgagggtttttgggtgaggttcaaagcttcaagatgtga--------gaaccaaaagaggga 4510943  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||    
T  4510942 gctcttgggaaagggttggtgccttttggggaa-gattcatggggttgggaaacacatgagtggagagtcatttgtgagcaactttggtgagt 4510851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 2361466 - 2361274
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||  |||||||||||||| || ||||||||||||||    ||||  ||||||||||||||||||| |||| |||||||||||    
T  2361466 caaaggagggaacttttaggattttagatactaaagattgagggtctttgggtgagattcaatccttcaagatgtgaatcttgaagaatcaaaagagggg 2361367  T
Q  115 gttcttgggata-gggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| || | |||||||||||||||||| |  ||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  2361366 gctcttgtgaaaagggttggtgccttttggggat-gattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 2361274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 6360407 - 6360215
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||  | | |||| |||||||||||||||||||||||||||||||||||    
T  6360407 caaaggagagaacttttagggttttagatattaaaggttgagggtctttgggtgaggttaaaagtttcaagatgtgaatcttggagaaccaaaagagggg 6360308  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||  ||||||||||| |   ||||||||||| | ||  |||||||||||| |||||||| |||||||||||||||||||||    
T  6360307 gctcttgagaaaaggaatggtgcctttt-gaagaagattcatggagttgaaaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 6360215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 32358331 - 32358189
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  32358331 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 32358232  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatgg 157  Q
    | ||||| | | ||||||||||||||||||| ||| ||||||||    
T  32358231 gctcttgtgaaaagggttggtgccttttggggaaa-attcatgg 32358189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 206 - 423
Target Start/End: Complemental strand, 8359337 - 8359104
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca-- 303  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||      
T  8359337 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctctactctcattatcttgtttatcctttggttagattgtggttttgctatgcact 8359238  T
Q  304 ------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
          |||||||        ||||||||||||||   |||| ||||||||||| || ||  ||| |||||||||||||||||||||| |||||||||||    
T  8359237 tgttttctagattagatctagattgttgttgttgc---ttgtgatttacttttgattgttggttgccattgatacttgctccacgaatctaaatttcatt 8359141  T
Q  390 aatgtgaaatttggaatt---gaccgaattcacaaca 423  Q
      |||||  |||||||||   ||||||||||||||||    
T  8359140 ggtgtgaggtttggaatttgagaccgaattcacaaca 8359104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 48599819 - 48599637
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||          ||||||||||||    
T  48599819 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaa----------ccaaaagagggg 48599730  T
Q  115 gttcttgggata-gggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| || | |||||||||||||||||| || ||||||||||| ||| ||| ||||||||||||||||  |||||||||||||||||||||    
T  48599729 gctcttgtgaaaagggttggtgccttttggggaa-gattcatggggttggaaaaaacatgagtagagagtcttttgtgagcaacttgggtgagt 48599637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 3259140 - 3259340
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgc-- 302  Q
    ||||| |||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||      
T  3259140 agttgaaccgaactgggtgaacatttcctggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgccc 3259239  T
Q  303 ------actagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
           |||||||        ||||||||| |||||||| ||||||||| ||||||||||  |||||||||||||||||||| ||||| |||| |||||    
T  3259240 gtgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgtcattgatacttgctccccgaatctaaagttcat 3259339  T
Q  389 t 389  Q
    |    
T  3259340 t 3259340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 5116307 - 5116436
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| | |||||||||| ||||| |||||||||||| ||||||||| |||| || ||||| |||||||||||||||||| ||||||||||||||||    
T  5116307 caaaggaggggacttttagggtatttaaatactaaaggttgagggtctttaggtgatgttcaaaacttcaagatgtgaatctttgagaaccaaaagaggg 5116406  T
Q  114 ggttcttgggatagggttggtgccttttgg 143  Q
    || |||||||| ||||| ||||||||||||    
T  5116407 ggctcttgggagagggtcggtgccttttgg 5116436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 205 - 407
Target Start/End: Original strand, 29608882 - 29609094
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgt-gattttgctatgca 303  Q
    ||||||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||| ||||||    
T  29608882 agttggaccgaactgagtgaatatttcttggtgttgttatcttttctctactctctttatcttgtttatcctttgcttagattgtggtttttgatatgca 29608981  T
Q  304 ctagatt----------------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttca 387  Q
    || | ||                |||||||||||||||||| ||||||||| |||||       |||||||||||||||||||||||||| |||||||||    
T  29608982 cttggtttctatattagatctagattgttgttgttgcttgtggttatttacatttgg-------ttgtcattgatacttgctccacgaatctaaatttca 29609074  T
Q  388 ttaatgtgaaatttggaatt 407  Q
    |||||||||  |||||||||    
T  29609075 ttaatgtgaggtttggaatt 29609094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 22328411 - 22328312
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||    
T  22328411 gttggaccgaactgggtaaatattttttggtgttgttatcttttctctactctctttatcttgtttattcttttgttcgattgtggttttgttatgcact 22328312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 4508729 - 4508629
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  4508729 agttggaccgaactgggtgaacatttcttggtgttgttatattttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcac 4508630  T
Q  305 t 305  Q
    |    
T  4508629 t 4508629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 48599357 - 48599250
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||  ||||||| |||||    
T  48599357 agttggaccgaactgggtgaacatttcttgatgttgttatcttttctttactctctttatcttgtttattccttggttggattgtagttttgctgtgcac 48599258  T
Q  305 tagattat 312  Q
    | ||||||    
T  48599257 ttgattat 48599250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 424
Target Start/End: Original strand, 2390472 - 2390668
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca--------ctagatta--------ttgttgttgttgcttgtt 329  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||| ||        ||||||||        |||||||| ||| ||||     
T  2390472 ttttctctactctctttatcttgtttatccttttgttggattgtggttttgctatacatttgttttctagattagatctagattgttgttattgattgtg 2390571  T
Q  330 gttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga--ccgaattcacaacaa 424  Q
    ||||||||| ||||||||||  |||||||||||||||||||||| ||| ||||||||||| ||||||  |||||| ||||  |||||||||||||||    
T  2390572 gttatttacatttggttattggttgtcattgatacttgctccactaatctaaatttcattgatgtgaggtttggatttgaatccgaattcacaacaa 2390668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 32358077 - 32357979
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||| ||  |||||| ||||| ||||||    
T  32358077 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttaacttgtttattccttgcttgaattgtggttttgttatgca 32357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 4510571 - 4510466
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||| | || |||  |||||| |||||||||||||    
T  4510571 agttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcac 4510472  T
Q  305 tagatt 310  Q
    | ||||    
T  4510471 ttgatt 4510466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 4512413 - 4512308
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||| | || |||  |||||| |||||||||||||    
T  4512413 agttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctatgcac 4512314  T
Q  305 tagatt 310  Q
    | ||||    
T  4512313 ttgatt 4512308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 34310736 - 34310637
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttatt-ctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||||||| |||| |  ||||||||| |||||||||| |||||||||||||||||||||| ||||||||  |||||| ||||||||||||||    
T  34310736 ttggaccgaactgggtgaacaatctttggtgttgttatcttttctttactctctttatcttgtttattcctttggttgaattgtggttttgctatgcact 34310637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 8359708 - 8359621
Alignment:
Q  119 ttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    |||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||  ||||||||||||||| |||||    
T  8359708 ttgggaaagggttggtgccttttggggaa-gattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttggatgagt 8359621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 22328254 - 22328182
Alignment:
Q  352 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 424  Q
    |||||||| |||||| |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||    
T  22328254 ttgtcattaatacttactccacgaatctaaatttcattgatgtgagatttggaattgaccgaattcacaacaa 22328182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 22552866 - 22552791
Alignment:
Q  81 tcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatgg 157  Q
    |||| ||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||||||| ||||||||||||    
T  22552866 tcaaaatgtgaatcttagagaaccaaaagagggggctctt-ggaaacggttggtgccttttgggaaaagattcatgg 22552791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 6359975 - 6359872
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttc-tctactctctttatcttgtttatt-ctttggttagattgtgattttgctatg 301  Q
    ||||||| |||||||||| |||| ||||||||||||| ||||||||| | | || ||||||||||||||||| |||  ||| ||||||| ||||||||||    
T  6359975 agttggatcgaactgggtcaacaatttcttggtgttgttatcttttcatttgctttctttatcttgtttattccttaagttggattgtggttttgctatg 6359876  T
Q  302 cact 305  Q
    ||||    
T  6359875 cact 6359872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 30814438 - 30814505
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttc 82  Q
    |||||||| |||||||||||| |||||||||| |||||| ||||||||||||||  | ||||||||||    
T  30814438 caaaggagggaacttttagggttttagatacttaaggttgagggtctttgggtgaggttcaaagcttc 30814505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 205
Target Start/End: Complemental strand, 43363839 - 43363719
Alignment:
Q  83 aagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagag 182  Q
    |||||||| |||||||||||| ||||||||| | |||||||| |  |||||| ||||||||| | |||||||  ||| || ||||||||||||  |||||    
T  43363839 aagatgtgtatcttggagaactaaaagagggagctcttgggacattgttggttccttttgggaagagattca-agggttgagaaacacatgagatgagag 43363741  T
Q  183 tcaattgtgagcaacttgggtga 205  Q
    ||  |||||||||| ||||||||    
T  43363740 tc-cttgtgagcaatttgggtga 43363719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 34310616 - 34310552
Alignment:
Q  310 tattgttgttgttgcttgttgt-tatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||||| || ||||||| ||||||||||  ||||||||||||||||||||||    
T  34310616 tattgttgttattgcttgtggtctatttacatttggttattggttgtcattgatacttgctccac 34310552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 2360960 - 2360899
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||| || |||||||||||||||||||| ||||||  |||||| ||||| ||||||||    
T  2360960 tcttttctttattctctttatcttgtttattccttggttgaattgtggttttgatatgcact 2360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 409
Target Start/End: Complemental strand, 48599196 - 48599139
Alignment:
Q  352 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattga 409  Q
    |||||||||||||||||||||||||| ||||||| ||| |||| || || ||||||||    
T  48599196 ttgtcattgatacttgctccacgaatctaaattttattgatgtaaagttcggaattga 48599139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 1360154 - 1360102
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||||||| |||||||||||||||| |||||| ||| ||||||| |||||||    
T  1360154 ttttctctattctctttatcttgtttcttcttttgttcgattgtggttttgct 1360102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 4510450 - 4510386
Alignment:
Q  310 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  4510450 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 4510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 4512292 - 4512228
Alignment:
Q  310 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  4512292 tattgttgttattgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 4512228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 14301437 - 14301390
Alignment:
Q  250 ctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||    
T  14301437 ctctactctctttatcttgtt-attctttgatttgattgtgattttgct 14301390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 43363446 - 43363406
Alignment:
Q  250 ctctactctctttatcttgtttattctttggttagattgtg 290  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  43363446 ctctactctctttatcttgtttgttctttggttcgattgtg 43363406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 31105416 - 31105385
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggt 236  Q
    ||||||||||||||||||||||||||||||||    
T  31105416 agttggaccgaactgggtaaacatttcttggt 31105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 31519048 - 31519081
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    |||||||||||||||| |||||||||||||||||    
T  31519048 agttggaccgaactggataaacatttcttggtgt 31519081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 6359773 - 6359741
Alignment:
Q  391 atgtgaaatttggaattgaccgaattcacaaca 423  Q
    ||||||| |||||||||||||||||||||||||    
T  6359773 atgtgaagtttggaattgaccgaattcacaaca 6359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 22552485 - 22552453
Alignment:
Q  341 ttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| ||||||||||||||||||||||    
T  22552485 ttggttattagttgtcattgatacttgctccac 22552453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 6096091 - 6095902
Alignment:
Q  18 aggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggtt 117  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |    
T  6096091 aggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggggct 6095992  T
Q  118 c-ttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | || | | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  6095991 cttttgaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 6095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 40913011 - 40913204
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||    
T  40913011 caaaggaggggacttttagggttttagatactaaaggtttagggtctttgggtgaggttcaaagcttcaaaatgtgaatcttggagaaccaaaagagggg 40913110  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||||    
T  40913111 gctcttgggaaaagggttggtgcctttttggagaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaaattgggtgagt 40913204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 46860143 - 46860336
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| |||||||||||||||| || ||||||||||||||| ||||||||||||||  | ||||||||||| |||||||||||||||||||||||||||||    
T  46860143 caaatgagagaacttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcatgatgtgaatcttggagaaccaaaagaggg 46860242  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  46860243 ggctcttgggaaaagggttggtgccttttggg-gaagattcatagggatgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 46860336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 41820016 - 41819825
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||| ||||||||||  ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||    
T  41820016 caaaggagataacttttaggtttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttagagaaccaaaagagggg 41819917  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| ||| |||||||||||||| ||||||    
T  41819916 gctcttgggaaaagggttggtgccttttggg--aagattcatggggttgggaaacacatgagtggagactcatttgtgagcaacttgagtgagt 41819825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 30235798 - 30235990
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  30235798 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 30235897  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||||  || |||||||||| ||| ||||||| |||| |||||||| |||||||||| ||||||||||    
T  30235898 gctcttgtgaaaagggttggtgccttttggg-gaatattcatggggttggaaaacacaagagtggagagtcatttgtgagcaagttgggtgagt 30235990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 34490886 - 34491078
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  34490886 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 34490985  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||| ||  ||||||||||| | ||  |||||||||||| |||||||| |||||||||||||||||||||    
T  34490986 gctcttgtgaaaagggttggtgcctttt-ggagaagattcatggagttgaaaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 34491078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 43402285 - 43402097
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  43402285 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 43402186  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggt 203  Q
    | ||||| | | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| ||| |||||| ||||||||||    
T  43402185 gctcttgagaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagaatcatttgtgaacaacttgggt 43402097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 43404228 - 43404036
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||| ||| |||||||||||| ||||||||||||| ||| ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  43404228 caaatgagggaacttttagggttttagatactaaaagttgagggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaaccaaaagagggg 43404129  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||| ||| |||||||||||||||||    
T  43404128 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtggagagtcatttgggagcaacttgggtgagt 43404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 28074290 - 28074481
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  28074290 caaaggaggaaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaaccaaaagagggg 28074389  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| |  |||||||| |||||||  |||||||||||||||||||||||||||||| ||||||| |||| ||| ||||| |||||||    
T  28074390 gctcttgggaaatagttggtgcgttttggg-gaagattcatggggatgggaaacacatgagtggagagtctattgagagaaacttaggtgagt 28074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 36018523 - 36018716
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||||||||||| |||| || ||||||||||||||| ||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||    
T  36018523 caaaggagagaactttcagggtatgtagatactaaaggttgagggtctttggatgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 36018622  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     | | ||||| | |||||||||||||||||||  ||||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||||    
T  36018623 agcttttgggaaaagggttggtgccttttggg-gaagatccatggggatgggaaacacatgaatggagagtcatttgtgagcaacttgggtgagt 36018716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 54593377 - 54593570
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| || ||||||||||||||| |||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  54593377 caaaggagggaacttttagggtatgtagatactaaaggttgagggtccttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 54593476  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | ||||||||| |||||||||  ||||||||||||||||| |||||||||||| |||||||  |||||||||||||| ||||||    
T  54593477 ggctcttgggaaaagggttggtaccttttggg-gaagattcatggggatggaaaacacatgagtggagagtcttttgtgagcaacttgagtgagt 54593570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 47303925 - 47304116
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||||||||||||| || ||||||||||||| ||| | ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  47303925 caaaggagagaacttttatggttttagatactaaatgttgaaggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 47304024  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||   ||||||||||||| |||||||    
T  47304025 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagt-ttttgtgagcaacttaggtgagt 47304116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 49199966 - 49199778
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  49199966 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaaccaaaagagggg 49199867  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggt 203  Q
    | | ||| | | |||||||||||||||||||  ||||||||||||| ||||||||| |||||| |||||||  |||||||||||||||||    
T  49199866 gctattgtgaaaagggttggtgccttttggg-gaagattcatggggttgggaaacatatgagtggagagtcttttgtgagcaacttgggt 49199778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 4569624 - 4569816
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||| |||||||||||| |||||||||||    
T  4569624 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtaaatcttggagaatcaaaagagggg 4569723  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | ||||   |||||| |||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  4569724 gctcttgggaaaagggggtgtgcctattggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 4569816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 55302460 - 55302268
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||  ||||||||||| ||||||||||||| ||| ||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||     
T  55302460 caaaggaggaaacttttagggttttagatactaaaagttgagggtctttggatgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggga 55302361  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | ||||||||||||||||||| ||| ||||||| || ||| |||||||||||| |||| ||  |||||||||||||| ||||||    
T  55302360 gctcttgggaaaagggttggtgccttttggg-aaaaattcatgaggttggaaaacacatgagtggagattcttttgtgagcaacttgagtgagt 55302268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 206 - 423
Target Start/End: Original strand, 46860621 - 46860857
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac- 304  Q
    ||||||||||| ||| | ||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||     
T  46860621 gttggaccgaattggatgaacattttttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 46860720  T
Q  305 -------tagat--------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
           |||||        |||||||||||||| |||| ||||||||| ||||||||||  ||| |||||||| ||||||||||||| |||||||||||    
T  46860721 tggtttatagattaggtctatattgttgttgttgtttgtggttatttacatttggttattggttgccattgatatttgctccacgaatctaaatttcatt 46860820  T
Q  390 aatgtgaaatttggaatt---gaccgaattcacaaca 423  Q
     ||||||  |||||||||   || |||||||||||||    
T  46860821 gatgtgatgtttggaatttgagatcgaattcacaaca 46860857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 34795542 - 34795700
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||||| ||||||||| |||||||||||||||||| | |||| ||||||| || ||||||||||||||| ||||||||||||||||| |||||||    
T  34795542 caaaggagagatcttttagggtatttagatactaaaggttgatggtcgttgggtgatgttcaaagcttcaagatctgaatcttggagaaccagaagaggg 34795641  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    |||||| |||| ||| ||  ||||||||| | | |||||||||||| ||||| ||||||    
T  34795642 ggttctagggagaggtttcatgccttttgaggagagattcatggggttgggatacacat 34795700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 206 - 403
Target Start/End: Original strand, 36018995 - 36019208
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca-- 303  Q
    ||||||||||||||| | ||||||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||  ||      
T  36018995 gttggaccgaactggatgaacattttttggtgttgttatcttttttctactctctttatcttgtttatcctttggttagattgtggttttgttaaacact 36019094  T
Q  304 ------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
          |||||||        |||||| ||||||||||| || |||||| |||| |||||  |||| ||||||||||||||||||||| |||||||||||    
T  36019095 tgttttctagattagatctagattgttattgttgcttgtggtaatttacatttgattattggttgtgattgatacttgctccacgaatctaaatttcatt 36019194  T
Q  390 aatgtgaaatttgg 403  Q
     || |||| |||||    
T  36019195 gatatgaagtttgg 36019208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 5434374 - 5434180
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||  |||||||||| ||| ||| |||||||||| | |  | | ||||||||||||||| ||||||  |||||||||||||||    
T  5434374 caaaggagggaacttttaggatatttagataccaaaagttaagggtctttgagggaggtttaaagcttcaagatgtaaatcttatagaaccaaaagaggg 5434275  T
Q  114 ggttcttgggata-gggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || |||||||| | ||||| |||  |||| || | |||||||||||| | |||||||||||||| |||||||  |||||||||| ||||||||||    
T  5434274 ggctcttgggaaaagggttagtgttttttagggagagattcatggggttaggaaacacatgagtggagagtcttttgtgagcaagttgggtgagt 5434180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 6095622 - 6095522
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||| | |||||| ||||||| ||||||||| |||    
T  6095622 agttggaccgaactgtgtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgccttggttggattgtggttttgctatacac 6095523  T
Q  305 t 305  Q
    |    
T  6095522 t 6095522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 206 - 396
Target Start/End: Complemental strand, 41819544 - 41819340
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatctttt-ctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||| |||||||| ||||||| ||||||||| ||| |||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  41819544 gttggaccaaactgggtgaacatttattggtgttgttatttttttctctactttctttatcttgtttatcctttggttagattgtggttttgctatgcac 41819445  T
Q  305 tagattattg-------------ttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaa 391  Q
    | | ||  ||             ||||||||| |  |||| |||||||||||||| ||  ||| |||||||||||||||||||||| ||||||||||| |    
T  41819444 ttggtttatggactaggtctatattgttgttgttgcttgtgatttacttttggttgttggttgccattgatacttgctccacgaatctaaatttcattga 41819345  T
Q  392 tgtga 396  Q
    |||||    
T  41819344 tgtga 41819340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 43401822 - 43401635
Alignment:
Q  206 gttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||||| |||| | ||||||||||| | |||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43401822 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtgattttgctatg 43401723  T
Q  302 ca--------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||        |||||||        ||||||||| |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  43401722 cacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgccattgatacttgctccac 43401635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 38 - 207
Target Start/End: Original strand, 1683184 - 1683353
Alignment:
Q  38 ttagatactaaaggtttagggtctttgggtggtgctcaaa-gcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgc 136  Q
    ||||| |||||||||| ||||||||||||||    ||||| | ||||| ||||||||||||||||||||||||||  |||| || ||| |||||||||||    
T  1683184 ttagaaactaaaggttgagggtctttgggtgagattcaaatgtttcaa-atgtgaatcttggagaaccaaaagagaaggtttttcggaaagggttggtgc 1683282  T
Q  137 cttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     ||||||| | |||||||||||| ||| |||||||||||| || | ||| || |||||||||| |||||||    
T  1683283 attttgggaagagattcatggggttggaaaacacatgagtggataatcatttatgagcaactttggtgagt 1683353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 36 - 202
Target Start/End: Complemental strand, 26323986 - 26323821
Alignment:
Q  36 atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtg 135  Q
    |||||||||||||||||| |||||| |||||||  | ||||||||||||||||| ||||||| |||| |||||||| ||| | |||||| ||||||||||    
T  26323986 atttagatactaaaggttgagggtcattgggtgaagttcaaagcttcaagatgtaaatcttgaagaatcaaaagagagggctattgggaaagggttggtg 26323887  T
Q  136 ccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttggg 202  Q
    | ||||  | | |||||||||||| || ||||||||| |   |||||||  ||||||||||||||||    
T  26323886 cattttcagcagagattcatggggttgagaaacacatcaaaggagagtc-tttgtgagcaacttggg 26323821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 373
Target Start/End: Complemental strand, 49199490 - 49199303
Alignment:
Q  206 gttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||||| |||| | ||||||||||| | |||   ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  49199490 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatg 49199391  T
Q  302 ca--------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||        |||||||        ||||||||| |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  49199390 cacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgccattgatacttgctccac 49199303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 55301993 - 55301894
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||| ||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||||  ||||||  |||||||||||||    
T  55301993 gttggaccgaacttggtgaacatttcttagtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcact 55301894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 172
Target Start/End: Original strand, 39127236 - 39127389
Alignment:
Q  19 ggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggtt 117  Q
    ||||||||||||||||| ||||| ||||||||||||| ||| |||||| ||  | ||||||||||||||| |||||||| |||||| |||| |||||  |    
T  39127236 ggagagaacttttagggtatttacatactaaaggtttggggcctttgg-tgaggttcaaagcttcaagatatgaatcttagagaactaaaataggggact 39127334  T
Q  118 cttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    ||||| | || ||||||||||||| || | ||||||||| || ||||||||||||    
T  39127335 cttggaagagagttggtgcctttttgggagagattcatgaggttgggaaacacat 39127389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 30236270 - 30236371
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||| ||| |||| ||||||||||||| |||||||||| ||||||||||||||||||||| | |||||| ||||||| ||||| ||||||    
T  30236270 agttggaccgaactaggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttataccttggttggattgtgtttttgttatgca 30236369  T
Q  304 ct 305  Q
    ||    
T  30236370 ct 30236371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 54593849 - 54593951
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatg 301  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||| ||  ||||||||||||||||||||| |||  || ||||||| ||||||||||    
T  54593849 agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttagtctctctttatcttgtttattccttgctttggattgtggttttgctatg 54593948  T
Q  302 cac 304  Q
    |||    
T  54593949 cac 54593951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 40913438 - 40913542
Alignment:
Q  205 agttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctat 300  Q
    |||||||||||||||||| |||| | ||||||||||  | |||   |||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  40913438 agttggaccgaactgggtcaacaatctcttggtgttattgtctatttttctctaatctctttatcttgtttatcctttggttagattgtggttttgctat 40913537  T
Q  301 gcact 305  Q
    |||||    
T  40913538 gcact 40913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 312
Target Start/End: Original strand, 4570100 - 4570207
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttc-tctactctctttatcttgtttattctttg-gttagattgtgattttgctatgcac 304  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||| | | ||| ||||||||||||||||| |||  || ||||||| |||||||||||||    
T  4570100 ttggaccgaactgggtcaacatttcttggtgttgttatattttcttttgctccctttatcttgtttattccttgctttggattgtggttttgctatgcac 4570199  T
Q  305 tagattat 312  Q
    | ||||||    
T  4570200 ttgattat 4570207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 43403721 - 43403662
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  43403721 ttttctccactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 43403662  T

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Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 423
Target Start/End: Original strand, 46173669 - 46173738
Alignment:
Q  356 cattgatacttgctccac--gaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  46173669 cattgatacttgctccacacgaatctaaatttcattgatgtgaagtttggaattgaccgaattcacaaca 46173738  T

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Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 31340240 - 31340144
Alignment:
Q  211 accgaactgggtaaacattt-cttggtgttgatatcttttctcta-ctctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||| ||||||| |||||||||| |||||||||| |  || |||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  31340240 accgaactgggtcaacattttcttggtgttgttatcttttcttttgctttctttatcttgtttattccttagttggattgtggttttgctatgcact 31340144  T

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Target: chr3; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 20937842 - 20937893
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  20937842 tcttttctctactctctttatcttgtttattatttggttcgattgtgatttt 20937893  T

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Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 5270557 - 5270610
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttggttagattgtgattttgc 297  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  5270557 tcttttctctactctctttatcatgtttattctttggttcgattgtggttttgc 5270610  T

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Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 5433843 - 5433774
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaattt 385  Q
    |||||||||||||||||| |||||||     ||||||||  |||||||||||||||||||||||||| |||||||    
T  5433843 attgttgttgttgcttgtggttattt-----tggttattggttgtcattgatacttgctccacgaatctaaattt 5433774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 46173502 - 46173604
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctcta-ctctctttatcttgtttattctttggttagattgtgattttgctatgc 302  Q
    |||||||||||||| | | |||| ||||||||||||| |||||||||| |  || |||||||||||||||||  || ||| ||||||| |||||||||||    
T  46173502 agttggaccgaactagatcaacaatttcttggtgttgttatcttttcttttgctttctttatcttgtttatttcttagttggattgtggttttgctatgc 46173601  T
Q  303 act 305  Q
    |||    
T  46173602 act 46173604  T

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Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 26323092 - 26323027
Alignment:
Q  206 gttggaccgaactgggtaaacatttctt-ggtgttgatatcttttctctactctctttatcttgtt 270  Q
    ||||||||||| |||||||||| ||||| ||||||  | |||||||||||||||||||||||||||    
T  26323092 gttggaccgaagtgggtaaacaattctttggtgttattctcttttctctactctctttatcttgtt 26323027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 124
Target Start/End: Complemental strand, 31340503 - 31340462
Alignment:
Q  83 aagatgtgaatcttggagaaccaaaagagggggttcttggga 124  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  31340503 aagatgtgaatcttggagaaccaaaagagggggctcttggga 31340462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 6095501 - 6095438
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||||| ||||||||| |||| |||||  ||| ||||||||||||||||||    
T  6095501 tattgttgttattgcttgtggttatttacatttgattattggttgccattgatacttgctccac 6095438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 35139133 - 35139046
Alignment:
Q  83 aagatgtgaatcttggagaaccaaaag-agggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaaca 169  Q
    ||||||||||||||||||||||||||| |  |||||||| ||| ||||||| ||||||||| | | ||||||||| || ||| |||||    
T  35139133 aagatgtgaatcttggagaaccaaaagaaatgggttcttcggaaagggttgatgccttttgaggagagattcatgaggttggaaaaca 35139046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 43403640 - 43403578
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||| || |||||||| ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  43403640 attgttattattgcttgtggttatttacatttggttattggttgccattgatacttgctccac 43403578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 47304396 - 47304503
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctctactct------ctttatcttgtttattctttggttagattgtgattttgc 297  Q
    |||| ||||||||||||| |||| ||| ||||||||| |||||||||| | || |      ||||||||||||||||| || ||| ||||||| ||||||    
T  47304396 agtttgaccgaactgggtcaacaatttattggtgttgttatcttttcttttcttttgctttctttatcttgtttattccttagttggattgtggttttgc 47304495  T
Q  298 tatgcact 305  Q
    ||||||||    
T  47304496 tatgcact 47304503  T

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Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 49229659 - 49229607
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactct 258  Q
    |||||| ||||||||||||| ||||||| |||||| |||||||||| ||||||    
T  49229659 gttggatcgaactgggtaaatatttcttagtgttgttatcttttctttactct 49229607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 31340536 - 31340501
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaag 50  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31340536 caaaggagagaacttttagggttttagatactaaag 31340501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 54593978 - 54594033
Alignment:
Q  315 ttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctc 370  Q
    ||||| |||||||| ||||||||  ||||||||||  |||||||||||||||||||    
T  54593978 ttgttattgcttgtggttatttatatttggttattggttgtcattgatacttgctc 54594033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 1683661 - 1683710
Alignment:
Q  247 tttctctactctctttatcttgttta-ttctttggttagattgtgatttt 295  Q
    |||||||||||||||||||||||||| || ||||||| ||||||| ||||    
T  1683661 tttctctactctctttatcttgtttatttttttggttcgattgtggtttt 1683710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 312 - 424
Target Start/End: Original strand, 20937927 - 20938033
Alignment:
Q  312 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgacc 411  Q
    ||||||||| ||||||| |||||||     || |||||| ||||||||||||||||  |||| ||| ||||||| | | |||||| |||||| | || ||    
T  20937927 ttgttgttgctgcttgtagttattt-----tgcttattagttgtcattgatacttgtcccacaaatctaaattttactgatgtgagatttgg-agtgtcc 20938020  T
Q  412 gaattcacaacaa 424  Q
    |||||||||||||    
T  20938021 gaattcacaacaa 20938033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 50432634 - 50432573
Alignment:
Q  235 gtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    |||||| | ||| |||||||||||||||||||||||   ||||||||| ||||||| |||||||    
T  50432634 gtgttgttctctattctctactctctttatcttgtt--gtctttggtttgattgtggttttgct 50432573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 45726603 - 45726794
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||| ||| |||||||||||| ||||||||||||||||| || |||||||||||  | |||||||||||||||||||||||||||||||||||||||||     
T  45726603 caaatgagggaacttttagggttttagatactaaaggttgagagtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggga 45726702  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| |||||||||||||||||||  ||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||    
T  45726703 gctcttgggaaagggttggtgccttttggg-gaagattcatggggtttggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 45726794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 42288604 - 42288413
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||||||||||||||||| ||||||||||||||||    
T  42288604 caaatgagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaaacttcaagatgtgaatcttgaagaaccaaaagagggg 42288505  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  42288504 gctcttgggaaaagggttggtgccttttggg--aagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 42288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 17450264 - 17450456
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  17450264 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgagtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 17450363  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgag-tagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| |||||||||||| |||| | ||||||||||||||||||||||||||||||  |  |||||||||||||| |||||||||||||    
T  17450364 gctcttgggaaagggttggtgccctttgtg-aaagattcatggggatgggaaacacatgagcgaaggagtcaattgtgagaaacttgggtgagt 17450456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 1632227 - 1632035
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||  | |||||||||||||||||||||||||| |||||||||||||||    
T  1632227 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgagtgaggttcaaagcttcaagatgtgaatcttggggaaccaaaagagggg 1632128  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||| ||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  1632127 gctcttgtgaaaagggttggtgtcttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 1632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 35447379 - 35447187
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttg-gagaaccaaaagaggg 113  Q
    ||||||||||||||||||||| ||||||||||||||||| || || |||| |||  | ||||||||||||||||||| ||||| ||||||||||||| ||    
T  35447379 caaaggagagaacttttagggttttagatactaaaggttgagagtatttgtgtgaggttcaaagcttcaagatgtgagtcttgagagaaccaaaaga-gg 35447281  T
Q  114 ggttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||| | | ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  35447280 ggctcttgtgaaaagggttggtgccttttggg-aaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 35447187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 24397739 - 24397919
Alignment:
Q  25 aacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg 123  Q
    ||||||||||| |||||||||||||||||| | |||||||| |||  | |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  24397739 aacttttagggtatttagatactaaaggttgacggtctttgtgtgaggttcaaagcttcaaaatgtgaatcttggagaaccaaaagagggggctcttggg 24397838  T
Q  124 -atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggt 203  Q
     | |||||||||||||||| || | ||| |||| ||| ||| |||||||||||| |||||||| |||||| ||| ||||||    
T  24397839 aaaagggttggtgccttttagggagagactcatcgggctggtaaacacatgagtggagagtcatttgtgaccaatttgggt 24397919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 42262111 - 42261947
Alignment:
Q  9 gagaagcaaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaa 107  Q
    ||||| |||||||| || ||||||||| || ||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  42262111 gagaaccaaaggagggagcttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaa 42262012  T
Q  108 agagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    | |||||| |||| ||| ||||||||||||||| ||  | |||||||||||  ||||||||||||    
T  42262011 aaagggggctctttggagagggttggtgcctttaggtgagagattcatgggattgggaaacacat 42261947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 33647841 - 33648027
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||||||||||||| | |||||||||||||||||| | ||||||||||||  | |||||| ||||||||||||||||||||||| |||||||||     
T  33647841 caaaggagagaacttttagagtatttagatactaaaggttgaaggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaatcaaaagagga 33647940  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaactt 199  Q
    || ||||||| | ||||||||||||||||| | | ||||||| | || ||| ||||| ||||||||||||||| |||| ||| ||||    
T  33647941 ggctcttgggaaaagggttggtgccttttgaggagagattcacgaggttggaaaacatatgagtagagagtcatttgttagctactt 33648027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 7450975 - 7451158
Alignment:
Q  16 aaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggggg 115  Q
    ||||||| |||||||||||| |||||||||||||||||  | |||||||||||  | ||||||||||| |||||||||||||||||||||||||||||||    
T  7450975 aaaggagggaacttttagggttttagatactaaaggttg-gcgtctttgggtgaggttcaaagcttcaggatgtgaatcttggagaaccaaaagaggggg 7451073  T
Q  116 ttc-ttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttg 200  Q
     || |||| | ||||||| || ||||| ||  |||||| |||||| ||| |||||||||||| |||||||| ||||||||||||||    
T  7451074 ctctttggtaaagggttgatgactttt-ggagaagatttatggggttggaaaacacatgagtggagagtcatttgtgagcaacttg 7451158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 423
Target Start/End: Original strand, 33648319 - 33648548
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac- 304  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||     
T  33648319 gttggaccgaactgggtaaacatttattggtgttgttgtcttttctctactctctttatcttgtttattctttagtttaattgtgattttgctatgcact 33648418  T
Q  305 -------tagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
           ||||||        ||||||||||||||| || ||||     |||| ||||||  ||||||||||| ||| |||||||||| |||||||||||    
T  33648419 tggcttatagattaggcctagattgttgttgttgctcgtagtta-----tttttgttattggttgtcattgattcttactccacgaatctaaatttcatt 33648513  T
Q  390 aatgtgaaatttgga-attgaccgaattcacaaca 423  Q
     || ||| |||||||  ||||||||||||||||||    
T  33648514 gatatgagatttggattttgaccgaattcacaaca 33648548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 205 - 312
Target Start/End: Complemental strand, 35446907 - 35446800
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  35446907 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgctttggttgaattgtggttttgctatgcac 35446808  T
Q  305 tagattat 312  Q
    | ||||||    
T  35446807 ttgattat 35446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 17450722 - 17450822
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||| ||| |||| |  ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  17450722 agttggaccgaactaggtgaacaatctttggtgttgttatcttttctgtactctctttatcttgtttatcctttggttagattgtggttttgctatgcac 17450821  T
Q  305 t 305  Q
    |    
T  17450822 t 17450822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 45727074 - 45727172
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||| || |||||| |||||||||| ||||||||||||||  |||||||||||||| ||||||| |||||||||||||    
T  45727074 agttggaccgaactgggtgaacattttttagtgttgttatcttttctttactctctttatct--tttattctttggttggattgtggttttgctatgcac 45727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 30218529 - 30218372
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| |||||||||||| | ||| ||||||||||||||  | ||||| | |||| |||||||||||||| ||||||||  | |    
T  30218529 caaaggagggaacttttagggtatttagatactatatgttgagggtctttgggtgaggttcaaaacatcaaaatgtgaatcttggacaaccaaaaatgag 30218430  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacaca 171  Q
    || |  ||||| || ||| |||||||||||| | |||||||||||| |||||||||||    
T  30218429 ggcttatgggagagagttagtgccttttggggagagattcatggggttgggaaacaca 30218372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 424
Target Start/End: Original strand, 7451270 - 7451501
Alignment:
Q  213 cgaactgggtaaacatttcttggtgttga-tatcttttctctactctct--ttatcttgtttattctttggttagattgtgattttgctatgcact---- 305  Q
    |||||||||| ||||||| |||||||||  ||| |||||||||||||||  |||||||||||||||||||||| ||||||| ||||| ||||||||        
T  7451270 cgaactgggtgaacatttattggtgttgtctat-ttttctctactctctctttatcttgtttattctttggttcgattgtggttttgttatgcacttgtt 7451368  T
Q  306 ----agatta--------ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatg 393  Q
        ||||||        |||||||| |||||||| |||||| ||    |||||||  |||||||||| ||||||||||||||| ||||||||||| |||    
T  7451369 ttctagattagatctagattgttgttattgcttgtggttattgacaagaggttattggttgtcattgaaacttgctccacgaatctaaatttcattgatg 7451468  T
Q  394 tgaaatttggaattga--ccgaattcacaacaa 424  Q
    ||| ||||||| ||||  |||||||||||||||    
T  7451469 tgagatttggatttgagtccgaattcacaacaa 7451501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 42288134 - 42288033
Alignment:
Q  205 agttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||||||| || | |||||||||| || |||||||||| ||| ||||||| ||||||||||| |||||| ||||||| |||| |||||||    
T  42288134 agttggaccgaactgggtcaataatttcttggtgctgttatcttttctttaccctctttaacttgtttattccttggttggattgtggtttttctatgca 42288035  T
Q  304 ct 305  Q
    ||    
T  42288034 ct 42288033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 30218065 - 30217982
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtg 290  Q
    ||||||| ||||| ||||||||||| ||||||| | | | ||||||||||||||||||||||||||||||||||||| |||||||    
T  30218065 gttggactgaactcggtaaacattttttggtgtagctct-ttttctctactctctttatcttgtttattctttggtttgattgtg 30217982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 424
Target Start/End: Original strand, 24398349 - 24398457
Alignment:
Q  312 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgacc 411  Q
    ||||||||| ||||||| |||||||    || ||||||  ||||||||||||||||||| |||||| |||||||||||||||||   |||||||||||||    
T  24398349 ttgttgttgctgcttgtggttattt----tttgttattggttgtcattgatacttgctctacgaatctaaatttcattaatgtgcggtttggaattgacc 24398444  T
Q  412 gaattcacaacaa 424  Q
    ||| | |||||||    
T  24398445 gaagttacaacaa 24398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 24197643 - 24197731
Alignment:
Q  86 atgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgag 175  Q
    ||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||| |  || | || |||||||||||||||||||    
T  24197643 atgtgaatcttggggaaccaaaagaggggactcttgggagagggttggtgccttttggggagggaatgat-gggatgggaaacacatgag 24197731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 205 - 311
Target Start/End: Complemental strand, 1631755 - 1631651
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||||||||||||| || || ||||||| |||||| |||||||||  | ||||||||||||||||||||| ||  || ||||||| ||||||||| |||    
T  1631755 agttggaccgaactgagtgaatatttcttagtgttgttatcttttccttgctctctttatcttgtttattcctt--ttggattgtggttttgctatacac 1631658  T
Q  305 tagatta 311  Q
    | |||||    
T  1631657 ttgatta 1631651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 40935675 - 40935545
Alignment:
Q  15 caaaggagagaacttttagggat-ttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||||| | ||||||||  ||||| |||||||||| |||| ||||||| |    ||||||  || | |||||||||| |||||||||||||| |     
T  40935675 caaaggagagaccgtttagggaacttagaaactaaaggttgagggcctttgggagagattcaaagtgtccaaatgtgaatctaggagaaccaaaagatga 40935576  T
Q  114 ggttcttgggatagggttggtgccttttggg 144  Q
    || |||||||| ||||||||||||| |||||    
T  40935575 ggctcttgggaaagggttggtgcctattggg 40935545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 24398205 - 24398307
Alignment:
Q  206 gttggaccgaactgggtaaacattt-cttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||| | |||| || |||||||||| |||||   |||||||||||||||||||||||||| || |||||  ||||| | ||||||||||    
T  24398205 gttggaccgaactggctgaacaattacttggtgttgttatctatttttctctactctctttatcttgtttagtc-ttggtccgattgcggttttgctatg 24398303  T
Q  302 cact 305  Q
    ||||    
T  24398304 cact 24398307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 45727193 - 45727257
Alignment:
Q  310 tattgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||| |||||||||||||| ||| |||||| ||||||||||| ||| ||||||||||||||||||    
T  45727193 tattattgttgttgcttgtggtttatttacatttggttattagttgccattgatacttgctccac 45727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 423
Target Start/End: Original strand, 17450844 - 17450956
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt--- 407  Q
    ||||||||||||||||||    |||||| |||||||||   |||||||||||||||||  ||||||| |||||||||||  |||||  ||| |||||       
T  17450844 attgttgttgttgcttgtg---atttacatttggttatcggttgtcattgatacttgcgtcacgaatctaaatttcattggtgtgaggtttagaatttga 17450940  T
Q  408 gaccgaattcacaaca 423  Q
    ||||||||||||||||    
T  17450941 gaccgaattcacaaca 17450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 34811651 - 34811599
Alignment:
Q  89 tgaatcttggagaaccaaaagagggggttcttgggatagggttggtgcctttt 141  Q
    |||||||| |||||||||||||||||||| |||| | | ||||||||||||||    
T  34811651 tgaatcttagagaaccaaaagagggggtttttggaaaaaggttggtgcctttt 34811599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 118; Significance: 6e-60; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 7001 - 7193
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  7001 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 7100  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||  |||||||||||||||||||||    
T  7101 gctcttgtgaaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 7472 - 7572
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||  |||||| |||||||||||||    
T  7472 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctatgcac 7571  T
Q  305 t 305  Q
    |    
T  7572 t 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 11231 - 11423
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  11231 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagatggg 11330  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| |||| |||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||||    
T  11331 gctcttggggaaagggttggtgcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcatttctgagcaacttgggtgagt 11423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 9e-59; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 40146944 - 40147126
Alignment:
Q  25 aacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg- 123  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  40146944 aacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggggctcttggga 40147043  T
Q  124 atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | | |||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  40147044 aaatggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 40147126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 213141 - 213334
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatctt-ggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||    
T  213141 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttgggagaaccaaaagaggg 213240  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  213241 ggctcttgggaaaagggttggtgcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 213334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 27015205 - 27015397
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||    
T  27015205 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggatcaaagcttcaagatgtgaatcttgaagaaccaaaagagggg 27015304  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||||  |||| |||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  27015305 gctcttgtgaaaagggttggtgccttttggg-gaagaatcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 27015397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 38746678 - 38746870
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  38746678 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaaccaaaagagggg 38746777  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||  | | |||||||||||||||||||  ||||||||||||| |||||||||| ||||| |||||||| ||| |||||||||||||||||    
T  38746778 gctcttaagaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacgtgagtggagagtcatttgcgagcaacttgggtgagt 38746870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 5057721 - 5057912
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||    
T  5057721 caaaggagagaacttttagggttttagatactaaaggttgagggtctttgggtgaggatcaaagcttcaagatgtgaatctttgagaaccaaaagagggg 5057820  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     || | || | | |||||||||||||||||  ||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||| ||||    
T  5057821 cttttgggaaaaaggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtggagagtcatttgtgagcaacttgggcgagt 5057912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 28277989 - 28278181
Alignment:
Q  16 aaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaaga-gggg 114  Q
    |||||||  ||||||||||| ||||||||||||||||| ||||||||||| ||  | |||||||||||||||||||||||||||||||||||||| ||||    
T  28277989 aaaggaggaaacttttagggttttagatactaaaggttgagggtctttggatgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggggg 28278088  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  28278089 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagactattgtgagcaacttgggtgagt 28278181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 316439 - 316624
Alignment:
Q  16 aaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||||||||||||  | | |||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||| ||||    
T  316439 aaaggagagaacttttattgtacttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagggggg 316538  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgg 201  Q
    | |||||||| ||||||||||||||||||| | ||||||||  || |||||||||||| |  ||||||||  |||||||||||||||    
T  316539 gctcttgggagagggttggtgccttttggggagagattcataaggttgggaaacacatcaaaagagagtc-tttgtgagcaacttgg 316624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 16642372 - 16642212
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||||| |||||||||| |||||||||||||||||| | ||||||||||||  | |||||||||||||| |||||||||| ||||||||||||  |    
T  16642372 caaaggagagcacttttagggtatttagatactaaaggttgatggtctttgggtgaggttcaaagcttcaagaagtgaatcttgaagaaccaaaaga--g 16642275  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagt 176  Q
    || |||||||| ||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  16642274 ggctcttgggaaagggttggtgccttttggggacagattcatggggttaggaaacacatgagt 16642212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 27638109 - 27637919
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||||||||| || ||||||||||||||||| ||  ||||||||||  | |||||| ||||||||||||||||||||||||||||||||||     
T  27638109 caaaggagggaacttttaaggttttagatactaaaggttgagaatctttgggtgaggttcaaag-ttcaagatgtgaatcttggagaaccaaaagaggga 27638011  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | ||||||||||| |||||||  ||||||||||||| | ||||||||||||||  ||||||  || ||||||||||||||||||    
T  27638010 gctcttgggaaaagggttggtgcattttggg--aagattcatggggttaggaaacacatgagtgaagagtcttttatgagcaacttgggtgagt 27637919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 10055143 - 10055027
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||| |||| | ||||||| |||| ||||||||||||    
T  10055143 tcaaagcttcaagatgtgaatcttggagaaccaaaagagagggctcttgggaaaggtttggtgccttatggggagagattcacggggttgggaaacacat 10055044  T
Q  173 gagtagagagtcaattg 189  Q
    |||||||||||||||||    
T  10055043 gagtagagagtcaattg 10055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 35615866 - 35616002
Alignment:
Q  36 atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtg 135  Q
    |||||||||||||||||| |||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||| || ||    
T  35615866 atttagatactaaaggttgagggtctttgagtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggggactcttgggaaaggggtgatg 35615965  T
Q  136 ccttttgggtaaagattcatggggatgggaaacacat 172  Q
    ||||||||| | |||||||||| | || |||||||||    
T  35615966 ccttttggggagagattcatggagttgagaaacacat 35616002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 14689902 - 14689747
Alignment:
Q  16 aaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||||||||||| ||||||||| | |||||| |||||||||| ||| || |||||| |||||||||||||| |||||||||||||||| |||    
T  14689902 aaaggagaaaacttttagggcatttagatagtgaaggttaagggtctttgagtgatgttcaaagtttcaagatgtgaattttggagaaccaaaagaaggg 14689803  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    ||||||| || ||||||||||||||||||  | |||||| || | |||||||||||||    
T  14689802 gttcttgtgaaagggttggtgccttttgg--agagattcgtgagaatgggaaacacat 14689747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 206 - 421
Target Start/End: Complemental strand, 27637634 - 27637403
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  27637634 gttggaccgaactgggtgaatatttcttggtgttgttatcttttctttactctctttatcttgtttattccttagttggattgtggttttgctatgcact 27637535  T
Q  306 agat----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
     | |                |||||||||||||||   |||| |||||||||||||| || |||  |||| |||||||||||||||||||||||||||||    
T  27637534 tggtttatagactaggtctatattgttgttgttgc---ttgtgatttacttttggttgttgattaccattaatacttgctccacgaatttaaatttcatt 27637438  T
Q  390 aatgtgaaatttggaatt---gaccgaattcacaa 421  Q
     ||||||  |||| ||||   ||||||||||||||    
T  27637437 gatgtgaggtttgaaatttgagaccgaattcacaa 27637403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 30792923 - 30793080
Alignment:
Q  25 aacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttggg 123  Q
    ||||||||||| | |||||||||||||||| ||||||||| |||| || ||||||||||||||||| | |||||||||||||||| | | || | |||||    
T  30792923 aacttttagggtaattagatactaaaggttgagggtctttaggtgatgttcaaagcttcaagatgtta-tcttggagaaccaaaatatgtggct-ttggg 30793020  T
Q  124 atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagt 183  Q
    | | ||||||||||||||||| | | |||||||||| |||||||||||||||||||||||    
T  30793021 aaaaggttggtgccttttggggagatattcatggggttgggaaacacatgagtagagagt 30793080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 4160307 - 4160496
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| |||||||| ||||||| ||||||||||||||| || ||||| |||||||| || |||||| || |||| ||||||| |||||||| |||||||||    
T  4160307 caaatgagagaacatttagggtatttagatactaaagtttgagggt-tttgggtgatgttcaaagtttaaagaagtgaatcctggagaactaaaagaggg 4160405  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    || |||||||| |||||  ||| |||||||| | |||||||| ||| |||| ||||| | ||| |||||||| |||||||||||| ||||||    
T  4160406 ggctcttgggagagggtaagtgtcttttggggagagattcatagggttggg-aacacgtaagtggagagtcatttgtgagcaactagggtga 4160496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 30802614 - 30802782
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||| ||| |||||||||||| ||||||||| |  ||||| ||||||||| ||||  | ||||||||||| ||||| | |||| |||||||||||||||     
T  30802614 caaatgagggaacttttagggtatttagatattctaggttgagggtctttaggtgaggttcaaagcttcatgatgtta-tcttagagaaccaaaagagga 30802712  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagt 183  Q
    || |||||||| |||||| |||||||||||| | |||||||||||| | | |||||||||||| ||||||    
T  30802713 ggctcttgggaaagggtttgtgccttttggggagagattcatggggttagaaaacacatgagtggagagt 30802782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 47 - 172
Target Start/End: Complemental strand, 33906491 - 33906366
Alignment:
Q  47 aaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggta 146  Q
    ||||||| |||||||||| |||  | || |||| |||| |||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||| |    
T  33906491 aaaggttgagggtctttgagtgaggttcgaagcctcaaaatgtgaatcttgtagaaccaaaaaagggggctcttgggagagggttggtgccttttgggga 33906392  T
Q  147 aagattcatggggatgggaaacacat 172  Q
     |||||||||||| || |||||||||    
T  33906391 gagattcatggggttgagaaacacat 33906366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 5058190 - 5058298
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttg-gttagattgtgattttgctatgca 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||  || |||| || |||| |||||||    
T  5058190 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattatggttttactatgca 5058289  T
Q  304 ctagattat 312  Q
    || ||||||    
T  5058290 cttgattat 5058298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 205 - 312
Target Start/End: Original strand, 27015668 - 27015774
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||| ||||||| | ||| |||||| ||||||||||||||||||||| ||||||||  |||||| ||||| |||||||    
T  27015668 agttggaccgaactgggtgaacattttttggtgt-gttattttttctttactctctttatcttgtttatgctttggttgaattgtggttttgatatgcac 27015766  T
Q  305 tagattat 312  Q
    | ||||||    
T  27015767 ttgattat 27015774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 316910 - 317002
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||||||||||| |||||||| ||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||  |||||| |||||||    
T  316910 gttggaccgaacttggtaaacaattctttgtgttgttctcttttccctactctctttattttgtttattctttggttcaattgtggttttgct 317002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 40147406 - 40147506
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||| || |||||  |||||||||| |||||| |||||||||||||| ||||||||  |||||| ||||| |||||||    
T  40147406 agttggaccgaactgggtgaacatttttttgtgtttttatcttttctttactctatttatcttgtttatcctttggttgaattgtggttttgttatgcac 40147505  T
Q  305 t 305  Q
    |    
T  40147506 t 40147506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 213613 - 213714
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatgca 303  Q
    |||||||||||||||| ||||||||||||||||| ||||||| || ||  ||||||||||||||||||||| |||  || ||||||| ||||||||||||    
T  213613 ttggaccgaactgggtgaacatttcttggtgttgttatctttcctttactctctctttatcttgtttattccttgcttttgattgtggttttgctatgca 213712  T
Q  304 ct 305  Q
    ||    
T  213713 ct 213714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 16640956 - 16640863
Alignment:
Q  212 ccgaactgggtaaacatttcttggtgttgatatcttttctctactctc--tttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||  ||||||||| ||||||||| |||| |||||| ||||| ||||||    
T  16640956 ccgaactgggtaaacatttcttggtgttgttatcttttctttgctctctatttatcttgcttattctttagttaaattgtggttttgttatgca 16640863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 4160746 - 4160838
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    |||||||| ||||||||||| |||| || |||||| |||||||||| |  |||| |||||||||||||||||||||| |||| || |||||||    
T  4160746 gttggaccaaactgggtaaatatttattagtgttgttatcttttctatgttctcattatcttgtttattctttggttcgattatggttttgct 4160838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 21206076 - 21205957
Alignment:
Q  86 atgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtca 185  Q
    ||||||||||| ||||||||||||| ||||||||| ||| |||||||||| |||||  | | || ||||| ||| ||||||||||||||||   ||||||    
T  21206076 atgtgaatcttagagaaccaaaagatggggttctttggaaagggttggtgtctttttcggagaggttcatagggttgggaaacacatgagtgaggagtca 21205977  T
Q  186 attgtgagcaacttgggtga 205  Q
     |||| || || ||||||||    
T  21205976 tttgtcagaaatttgggtga 21205957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 30793282 - 30793355
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggtt 282  Q
    ||||||||||||  |||||||||||||||||||   | |   |||||||||||||||||||||||||||||||||||    
T  30793282 gttggaccgaacaaggtaaacatttcttggtgtgtttgt---ttctctactctctttatcttgtttattctttggtt 30793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 404
Target Start/End: Original strand, 317038 - 317123
Alignment:
Q  314 gttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttgga 404  Q
    ||||||||||||||| |||||||     ||||||||  |||||| |||||||||  |||||||| ||||||||||| |||||| |||||||    
T  317038 gttgttgttgcttgtggttattt-----tggttattggttgtcactgatacttgtcccacgaatctaaatttcattgatgtgagatttgga 317123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 10700666 - 10700580
Alignment:
Q  211 accgaactgggtaaacatttcttg-gtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttg 296  Q
    ||||||||| ||||| | |||||  |||||| | |||||||||||| |||||||||||| |||||||||| || ||||||| |||||    
T  10700666 accgaactgagtaaataattctttcgtgttgttctcttttctctacgctctttatcttgcttattctttgatttgattgtggttttg 10700580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 16640803 - 16640737
Alignment:
Q  357 attgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    ||||||||||||||||||||| |||| || ||| | ||||| ||| |||||| ||||||||||||||    
T  16640803 attgatacttgctccacgaatctaaaatttattgacgtgaagtttagaattgtccgaattcacaaca 16640737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 16452225 - 16452258
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||||||||||||||||||||    
T  16452225 agttggaccgaactgggtaaacatttcttggtgt 16452258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 42927036 - 42927069
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgt 238  Q
    ||||||||||||||||||||||||||||||||||    
T  42927036 agttggaccgaactgggtaaacatttcttggtgt 42927069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 370
Target Start/End: Original strand, 213735 - 213795
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctc 370  Q
    |||||||||| |||||||| ||| ||||| |||||||||| ||||  ||||||||||||||    
T  213735 tattgttgttattgcttgtggttttttacatttggttattgattgctattgatacttgctc 213795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 10701059 - 10700948
Alignment:
Q  92 atcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacac----atgagtagagagtcaat 187  Q
    ||||||||||||  ||| |||||| ||||| || |||||| || ||||||||| | ||||| |||||| |  |||||||    || |||||||||||| |    
T  10701059 atcttggagaacgtaaaaagggggatcttgagaaagggtttgtaccttttggggagagatttatggggttaagaaacacataaattagtagagagtcatt 10700960  T
Q  188 tgtgagcaactt 199  Q
    ||||||||||||    
T  10700959 tgtgagcaactt 10700948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 281
Target Start/End: Original strand, 30803016 - 30803046
Alignment:
Q  251 tctactctctttatcttgtttattctttggt 281  Q
    |||||||||||||||||||||||||||||||    
T  30803016 tctactctctttatcttgtttattctttggt 30803046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 10054796 - 10054744
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    |||||| |||||| ||||||||||||||| |||| || |||||| ||||||||    
T  10054796 ttttctgtactctttttatcttgtttattttttgcttcgattgtaattttgct 10054744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 37167970 - 37168162
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||  | ||||||||||||||||| ||||| ||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  37167970 caaaggagggaacttttacagttttagatactaaaggttgagggtttttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 37168069  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  37168070 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 37168162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 28242061 - 28242253
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| || ||||||||||||||| ||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||    
T  28242061 caaaggagggaacttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcaaaatgtgaatcttggagaaccaaaagaggg 28242160  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||||||||||||||||  |||||||||  || |||||||||||||||| |||||||| |||||||||||||||||||||    
T  28242161 ggctcttgggaaaagggttggtgccttttggg--aagattcataaggttgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 28242253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 42298460 - 42298278
Alignment:
Q  25 aacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttg-gg 123  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  42298460 aacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggggctcttgtga 42298361  T
Q  124 atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  42298360 aaagggttggtgcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcatttgcgagcaacttgggtgagt 42298278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 7482726 - 7482533
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagag-gg 113  Q
    ||||||||  ||||||||||| |||||||||||| |||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||    
T  7482726 caaaggaggaaacttttagggttttagatactaacggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 7482627  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  7482626 ggctcttgggaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 7482533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 11348371 - 11348563
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||  |||||||||||| |||||||||||| |||| ||||||||||||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  11348371 caaaggatggaacttttagggttttagatactaagggttgagggtctttgggtgaggttcaaagtttcaagatgtgaatcttggagaaccaaaagagggg 11348470  T
Q  115 gttcttgggatagggt-tggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||||||| | ||| ||||||||||| ||  ||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||    
T  11348471 gctcttgggaaaaggtctggtgcctttt-ggagaagattcatggggttggaaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 11348563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 34603249 - 34603441
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||||||| |||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||||||||     
T  34603249 caaaggagggaacttttagggttttagatattaaaggttgaaggtctttgggtgatgttcaaagcttcaagatgtgaatcttggagaaccaaaagaggga 34603348  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| ||| ||||||||||||  | ||||  |||||||||||||||||||||    
T  34603349 gctcttgggaaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtgaaaagtcttttgtgagcaacttgggtgagt 34603441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 37033564 - 37033376
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||    ||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  37033564 caaaggagggaacttttagggtttta----ctaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 37033469  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | ||||||||||||||||| |  |||||||||| || |||||||||||||||| |||||||| |||||||||||||||||||||    
T  37033468 gctcttgggaaaagggttggtgccttttgag-gaagattcatgaggttgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 37033376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 47114845 - 47115036
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||||||||| || |||||||| ||||| || ||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||    
T  47114845 caaaggagggaacttttaaggctttagatattaaagattgagggtctttgggtgaggttcaaagcttcaagctgtgaatcttggagaaccaaaagagggg 47114944  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | ||||||||| |||||||||  ||||||||||||| |||||||||||||| | |||||||  |||||||||||||||||||||    
T  47114945 gctcttgggaacagggttggtaccttttggg--aagattcatggggttgggaaacacatgaatggagagtcttttgtgagcaacttgggtgagt 47115036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 29135921 - 29136112
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  29135921 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgagtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 29136020  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
      ||||||| | |||||||||||||||||||  ||||||||||||| | ||||| |||||||| ||||||   |||||||||||||||||||||    
T  29136021 actcttgggaaaagggttggtgccttttggg-gaagattcatgggg-ttggaaaaacatgagtggagagttttttgtgagcaacttgggtgagt 29136112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 34602834 - 34602642
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||||||| |||||||| | |||||||||||| || |||||||||||||||||||||||||||||||||||||||||     
T  34602834 caaaggagggaacttttagggttttagatattaaaggttgaaggtctttgggtgatgttcaaagcttcaagatgtgaatcttggagaaccaaaagaggga 34602735  T
Q  115 gttcttgg-gatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||  | |||||||||||||||||||  ||||||||||||| ||| ||||||||||||  | ||||  |||||||||||||||||||||    
T  34602734 gctcttggtaaaagggttggtgccttttggg-gaagattcatggggttggaaaacacatgagtgaaaagtcttttgtgagcaacttgggtgagt 34602642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 205 - 426
Target Start/End: Original strand, 37168443 - 37168681
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  37168443 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggtttgattgtggttttgctatgcac 37168542  T
Q  305 tagattat--------------tgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatta 390  Q
    | ||||||              | |||||||||||||  ||||||||| ||||||||||  ||||||||||||||||||| |||||| |||||||||||     
T  37168543 ttgattatagactaggtctatatattgttgttgcttgaggttatttacatttggttattggttgtcattgatacttgctctacgaatctaaatttcattg 37168642  T
Q  391 atgtgaaatttggaatt---gaccgaattcacaacaagt 426  Q
    ||| || ||||||||||   || ||||||||||||||||    
T  37168643 atgcgagatttggaatttgagatcgaattcacaacaagt 37168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 13547584 - 13547394
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||     
T  13547584 caaaggagagaacttttagagttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggataaccaaaagaggga 13547485  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    | ||||| | | ||||| ||||||||||| | ||| |||||||||| ||| |||||||||||| |||||||  |||||||||||||||||||    
T  13547484 gctcttgtgaaaagggtcggtgccttttgaggaaa-attcatggggttggaaaacacatgagtggagagtcttttgtgagcaacttgggtga 13547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 13549495 - 13549305
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||     
T  13549495 caaaggagagaacttttagagttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggataaccaaaagaggga 13549396  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    | ||||| | | ||||| ||||||||||| | ||| |||||||||| ||| |||||||||||| |||||||  |||||||||||||||||||    
T  13549395 gctcttgtgaaaagggtcggtgccttttgaggaaa-attcatggggttggaaaacacatgagtggagagtcttttgtgagcaacttgggtga 13549305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 193285 - 193476
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||| ||||||||||| |||||||| |||||||| ||||||||| ||||  | ||||||||||| ||||||||||||||||||||||||||||||    
T  193285 caaaggagataacttttagggttttagatattaaaggttgagggtctttcggtgaggttcaaagcttcatgatgtgaatcttggagaaccaaaagagggg 193384  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | |||| |||| | |||||||||||||||||  ||||||||||||| ||||||||||||| ||  ||||||  ||||||||||||||| |||||    
T  193385 gctcttggggaaaaggttggtgccttttggg--aagattcatggggttgggaaacacatgtgtgaagagtcttttgtgagcaacttggatgagt 193476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 37879406 - 37879214
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||  ||||| |||||| ||||||||||||| ||| ||| ||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||    
T  37879406 caaaggaaggaactgttagggttttagatactaaatgttgaggatctttgggtgaggttcaaagcttcaagatgtgaatcttggagaacaaaaagagggg 37879307  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | | ||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  37879306 gctcttgtgaaaaaggttggtgccttttggggaaa-attcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 37879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 19754164 - 19754356
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| | ||||||||||||||| ||||||||||||||  | |||||||  || ||| ||||||||||| |||||| |||||||    
T  19754164 caaaggagggaacttttagggttctagatactaaaggttaagggtctttgggtgaggttcaaagcaccatgatttgaatcttggaaaaccaagagagggg 19754263  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||    
T  19754264 gctcttgtgaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggtgagt 19754356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 206 - 424
Target Start/End: Original strand, 28242451 - 28242689
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgatttt-gctatgcac 304  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||| ||||| |||    
T  28242451 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttgtttatcattttgttagattgtggtttttgctattcac 28242550  T
Q  305 tagatt----------------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcat 388  Q
    | | ||                |||||||||||||||||  ||||||||| ||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  28242551 ttggtttctaaattagatctagattgttgttgttgcttgaggttatttacatttggttattggttgtcattgatacttgctccacgaatctaaatttcat 28242650  T
Q  389 taatgtgaaatttggaatt---gaccgaattcacaacaa 424  Q
    | ||||||  |||||||||   |||||||||||||||||    
T  28242651 tgatgtgaggtttggaatttgagaccgaattcacaacaa 28242689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 47255829 - 47255650
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  47255829 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagatggg 47255730  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaactt 199  Q
    | |||||||| |    ||||||||||||||  ||||||||| ||| |||||||||||||| | |||||||  |||||||||||||    
T  47255729 gctcttgggaaa---atggtgccttttggg-gaagattcat-gggttgggaaacacatgattggagagtcttttgtgagcaactt 47255650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 13549023 - 13548923
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13549023 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggttttgctatgcac 13548924  T
Q  305 t 305  Q
    |    
T  13548923 t 13548923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 36 - 207
Target Start/End: Original strand, 41135515 - 41135685
Alignment:
Q  36 atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtg 135  Q
    |||||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||||||||||||||||||||  | | |||||| ||||||||||    
T  41135515 atttagatactaaaggttgagggtctttgggtgaggttcaaaccttcaagatgtggatcttggagaaccaaaagaggaagattttgggagagggttggtg 41135614  T
Q  136 ccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    |||||| || | |||||||||||| |||||||||||| |   |||||||  ||||||| |||||||||||||    
T  41135615 ccttttagggagagattcatggggttgggaaacacatcaaaggagagtc-tttgtgagaaacttgggtgagt 41135685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 13547112 - 13547020
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgc 297  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  13547112 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggttttgc 13547020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 396
Target Start/End: Original strand, 47115319 - 47115525
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca-- 303  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||| |||| |||||||||||||| |||| ||||||||||| ||||| ||||||      
T  47115319 gttggaccgaactgggtgaacatttcttgatgttgttatcttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttatgcact 47115418  T
Q  304 ------ctagatt--------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
          |||||||        ||||||||| ||||||||  |||||||| |||| || || ||||||||||||||||||||||||||| ||||||| |||    
T  47115419 tgttttctagattagatctagattgttgttattgcttgtgattatttacatttgattgttgattgtcattgatacttgctccacgaatctaaattttatt 47115518  T
Q  390 aatgtga 396  Q
     ||||||    
T  47115519 gatgtga 47115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 205 - 407
Target Start/End: Complemental strand, 7482253 - 7482030
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||| ||| |||||||| |||| |||  ||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  7482253 agttggaccgaactaggtgaacatttcatggtattgtcatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcac 7482154  T
Q  305 tagat-----------------tattgttgttgttgcttgttgttatttac----ttttggttattaattgtcattgatacttgctccacgaatttaaat 383  Q
    | |||                 ||||||||||||||||||  |||||||||     ||||||||||  ||||||||||||||||||||||||||||||||    
T  7482153 ttgattatagactaggtctatatattgttgttgttgcttgaggttatttacattaatttggttattggttgtcattgatacttgctccacgaatttaaat 7482054  T
Q  384 ttcattaatgtgaaatttggaatt 407  Q
    || ||| ||||||  |||||||||    
T  7482053 tttattgatgtgaggtttggaatt 7482030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 19752359 - 19752542
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||| ||| ||| |||||||| ||||||||||||||||| | ||||||||||||  | || |||| |||  ||||||||||||||||||||||||| |||    
T  19752359 caaatgagggaatttttagggttttagatactaaaggttgaaggtctttgggtgaggttctaagcgtcataatgtgaatcttggagaaccaaaagatggg 19752458  T
Q  115 gttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaactt 199  Q
    | ||||  || | |||||||||||||||||  ||||||||| | | |||||||||||||||| ||||||   |||||||||||||    
T  19752459 gctcttatgaaaaggttggtgccttttggg-gaagattcattgagttgggaaacacatgagtggagagtattttgtgagcaactt 19752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 205 - 423
Target Start/End: Complemental strand, 31925730 - 31925498
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgt-ttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||||| ||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||    
T  31925730 agttggaccgaactaggtgaacatttcttggtgttgttattttttctttactctcgttatcttgtattattctttggttggattgtggttttgctatgca 31925631  T
Q  304 ctagat----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttca 387  Q
    || | |                |||| ||||| |||||||| ||||      ||||||| ||  ||||||||||||||||||| |||||| |||||||||    
T  31925630 cttggtttatagactaggtctatattattgttattgcttgtggtta-----atttggttgttggttgtcattgatacttgctctacgaatctaaatttca 31925536  T
Q  388 ttaatgtgaaatttggaatt--gaccgaattcacaaca 423  Q
    |||||||||| |||||||||  ||||||||||||||||    
T  31925535 ttaatgtgaagtttggaattcagaccgaattcacaaca 31925498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 47255361 - 47255259
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctct---actctctttatcttgtttattctttggttagattgtgattttgctatgc 302  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||| |||   |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  47255361 gttggaccgaactgggtgaacatttcttggtgttgttattttttttcttttactctctttatcttgtttatcctttggttagattgtggttttgctatgc 47255262  T
Q  303 act 305  Q
    |||    
T  47255261 act 47255259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 37 - 207
Target Start/End: Original strand, 6808142 - 6808312
Alignment:
Q  37 tttagatactaaaggtttaggg-tctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtg 135  Q
    ||||||||||||||||| |||| ||||| ||||  | ||||| ||||||||||||||||||||||||||||||||  ||| |||| ||| ||  || |||    
T  6808142 tttagatactaaaggttgaggggtctttaggtgaggttcaaaacttcaagatgtgaatcttggagaaccaaaagattgggctctt-ggagagattttgtg 6808240  T
Q  136 ccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     |||||||| | |||||||||||| ||| |||||||||| |  ||||||| |||||||||||| ||||||||    
T  6808241 tcttttgggaagagattcatggggttggaaaacacatgaatgaagagtcatttgtgagcaactagggtgagt 6808312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 42 - 207
Target Start/End: Complemental strand, 9109869 - 9109704
Alignment:
Q  42 atactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgcctttt 141  Q
    |||||||||||| ||||| ||||||||  | ||||| |||||||||||||||||||||||||||||| |||||  || ||||| ||||||| || |||||    
T  9109869 atactaaaggttgagggtatttgggtgaggttcaaaacttcaagatgtgaatcttggagaaccaaaaaaggggactcatgggagagggttgatgtctttt 9109770  T
Q  142 gggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||| | ||||||||| || ||||| |||||| |   |||||||  |||||||||| |||| |||||    
T  9109769 ggggagagattcatgaggttgggagacacatcaaatgagagtcttttgtgagcaatttggatgagt 9109704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 16216967 - 16216800
Alignment:
Q  36 atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtg 135  Q
    ||||||| |||||||||| |||||||||||||| |  |||||| ||||||||||  |||||| ||||||||||||||||| |||| | | ||||||||||    
T  16216967 atttagaaactaaaggttaagggtctttgggtgatattcaaaggttcaagatgtatatcttgaagaaccaaaagagggggctcttcgaaaagggttggtg 16216868  T
Q  136 ccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtga 205  Q
    | |||||| || | |||||| | | ||| |||||||||||  ||||||| ||||||||||||||| ||||    
T  16216867 cattttggatagaaattcat-gtgttggcaaacacatgagaggagagtc-attgtgagcaacttgagtga 16216800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 37876789 - 37876689
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||  |||||||  |||||| |||| ||||||||    
T  37876789 agttgaaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcatttggttgaattgtggtttttctatgcac 37876690  T
Q  305 t 305  Q
    |    
T  37876689 t 37876689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 29136395 - 29136493
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttga-tatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||| ||| |||||||||||||| ||  ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  29136395 ttggaccgaactaggtgaacatttcttggtgctgtctat-ttttctctactctctttatcttgtttatcctttggttagattgtggttttgctatgcact 29136493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 11348843 - 11349030
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatg 301  Q
    ||||||||||||||| || ||||||||||| ||||| |||||||||| ||  ||||||||||||||||||||| |||  || ||||||| ||||||||||    
T  11348843 agttggaccgaactgagtgaacatttcttgatgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgctatg 11348942  T
Q  302 cactagat----------------tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||| | |                |||||||||| |||||||| ||||||||| |||| |||||||||||||||||||||||||||||    
T  11348943 cacttggtttatagactaggtctatattgttgttattgcttgtggttatttacatttgattattaattgtcattgatacttgctccac 11349030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 34603737 - 34603815
Alignment:
Q  234 ggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagattat 312  Q
    ||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||    
T  34603737 ggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttgattat 34603815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 305
Target Start/End: Complemental strand, 37033050 - 37032991
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  37033050 ttttctctactctctttatcttgtttatcctttggttagagtgtgattttgctatgcact 37032991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 19754640 - 19754737
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||| ||||| |||| || ||||||| | |||||||||| ||||||||||||||||||||| |||| ||| ||||||| ||||||||||||    
T  19754640 agttggaccgaagtgggtcaacaatttttggtgt-gttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctatgca 19754737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 12318544 - 12318452
Alignment:
Q  207 ttggaccgaactgggtaaaca-tttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    |||||||||||| |||||||| ||| ||||||||| | |||||||| ||||| ||||||||||||||||||||||||  ||| ||||||||||    
T  12318544 ttggaccgaactaggtaaacaattttttggtgttgttctcttttctttactccctttatcttgtttattctttggttcaattatgattttgct 12318452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 42297996 - 42297894
Alignment:
Q  206 gttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctatg 301  Q
    ||||||||||||||||| |||| | ||||||||||| | |||   ||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  42297996 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctttactct-tttatcttgtttattatttggttggattgtgattttgctatg 42297898  T
Q  302 cact 305  Q
    ||||    
T  42297897 cact 42297894  T

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Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 28318188 - 28318094
Alignment:
Q  81 tcaagatgtgaatcttggagaaccaaaagag-ggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgag 175  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||| |||||| |||| ||||||| | |||||||| |||||| |||||| |||||    
T  28318188 tcaagatgtgaattttggataaccaaaagagaggggttcttgggaaagggttagtgcattttggggagagattcat-gggatgagaaacatatgag 28318094  T

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Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 31929418 - 31929344
Alignment:
Q  352 ttgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt--gaccgaattcacaacaa 424  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||| |||| ||||  |||||||||||||||||    
T  31929418 ttgtcattgatacttgctccacgaatctaaatttcattgacgtgaagtttgaaattgagaccgaattcacaacaa 31929344  T

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Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 22079039 - 22079137
Alignment:
Q  46 taaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttggg 144  Q
    ||||| || ||||||||||||||  | ||||||||||||||||||||||||  |||||||||||||||||   |||||  |||||||||| | ||||||    
T  22079039 taaagtttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttaaagaaccaaaagagggggcaattgggtgagggttggtgtcgtttggg 22079137  T

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Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 31928281 - 31928208
Alignment:
Q  37 tttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaaga 110  Q
    ||||||||||||||||| || |||||||| ||  | |||||||||||||||||||||||| || ||||||||||    
T  31928281 tttagatactaaaggttgagagtctttggatgaggttcaaagcttcaagatgtgaatcttagaaaaccaaaaga 31928208  T

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Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 31926089 - 31926010
Alignment:
Q  126 agggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgag 206  Q
    ||||||||||||||||||| || ||||||||||  |||||||||| ||||| |||| ||  ||||||||||||||||||||    
T  31926089 agggttggtgccttttggggaa-gattcatgggtttgggaaacacgtgagtggagaatcttttgtgagcaacttgggtgag 31926010  T

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Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 2926656 - 2926730
Alignment:
Q  206 gttggaccgaactgggtaaacatttctt-ggtgttgatatcttttctctactctctttatcttgtttattctttg 279  Q
    |||| |||||||| |||||||| ||||| ||||||| | | ||| ||||||||||||||||||||||||||||||    
T  2926656 gttgcaccgaactaggtaaacaattctttggtgttgttctttttactctactctctttatcttgtttattctttg 2926730  T

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Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 3331283 - 3331333
Alignment:
Q  81 tcaagatgtgaatcttggagaaccaaaagagggggttcttgggatagggtt 131  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  3331283 tcaagatgtgaatcttagagaaccaaaagagggggctcttgggaaagggtt 3331333  T

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Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 296
Target Start/End: Original strand, 193756 - 193849
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgtt-gatatcttttc-tctactctctttatcttgtttattctttggttagattgtgattttg 296  Q
    |||||||||||||||||| |||||||||||||||| | |||||| || | | || | |||||||||||||||| |||||| ||||||| |||||    
T  193756 agttggaccgaactgggtgaacatttcttggtgttcgttatcttctcttttgctttatttatcttgtttattccttggttggattgtggttttg 193849  T

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Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 25652231 - 25652308
Alignment:
Q  206 gttggaccgaactgggtaaacatttctt-ggtgttgatatcttttctctactctctttatcttgtttattctttggtt 282  Q
    |||| |||||||||| |||||| ||||| |||||||   ||||||||||||||||||||| ||||||||| |||||||    
T  25652231 gttgaaccgaactggataaacaattctttggtgttgccctcttttctctactctctttattttgtttattatttggtt 25652308  T

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Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 6808600 - 6808692
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||| ||||||| | |||| ||||||||| |||| | | | || ||||||||||||||||||||||| |||| ||| ||| |||||||||||    
T  6808600 gttggtccgaactagataaatatttcttggagttgttctttgttttctactctctttatcttgtttatgctttagtttgatagtgattttgct 6808692  T

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Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 4535858 - 4535783
Alignment:
Q  126 agggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgg 201  Q
    |||||||||| |||||||| | |||||||||||| ||  |||||||||||| || ||||  |||||||||||||||    
T  4535858 agggttggtgtcttttgggaatagattcatggggttgaaaaacacatgagtggatagtcgtttgtgagcaacttgg 4535783  T

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Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 19752865 - 19752928
Alignment:
Q  242 tatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||| | ||||||||||||||||||||| |||| ||| ||||||| |||| |||||||||    
T  19752865 tatcttttatttactctctttatcttgtttatccttttgttggattgtggttttactatgcact 19752928  T

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Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 394
Target Start/End: Original strand, 34603836 - 34603914
Alignment:
Q  316 tgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgt 394  Q
    ||||| ||||||  ||||||||| |||| |||||  |||||||||||||||||||||| ||| || |||||||| ||||    
T  34603836 tgttggtgcttgaggttatttacatttgattattggttgtcattgatacttgctccacaaatctagatttcattgatgt 34603914  T

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Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 6068290 - 6068447
Alignment:
Q  15 caaaggagagaacttttagggat-ttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||||||||||||||||  ||| |  ||||| ||| ||||||||||| ||    |||||   | |||| ||||||||  | ||||||||||||||    
T  6068290 caaaggagagaacttttagggaacttaaaggctaaaagttgagggtctttggatgagattcaaatgatgaagacgtgaatctaagggaaccaaaagaggg 6068389  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacaca 171  Q
    || |||| ||| | |||||||| |||||||| | ||||||||  || |||||||||||    
T  6068390 ggctcttaggaaaaggttggtgtcttttgggaagagattcataaggttgggaaacaca 6068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 9109440 - 9109355
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatc-ttgtttattctttggttagattgtg 290  Q
    |||| ||| |||| ||||||||||| |||| | || ||| |  ||||||||||||||||| ||||||||||||||||| |||||||    
T  9109440 gttgaaccaaactaggtaaacattttttggggctgttatttagtctctactctctttatctttgtttattctttggtttgattgtg 9109355  T

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Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 41136106 - 41136190
Alignment:
Q  339 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaa 424  Q
    |||||||||||  |||||| | |||||| | |||||||| ||||||||||| |||||| ||||||| || |||||||| |||||||    
T  41136106 ttttggttattggttgtcaataatactttccccacgaatctaaatttcattgatgtgagatttggagtt-accgaatttacaacaa 41136190  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 373
Target Start/End: Original strand, 29136516 - 29136577
Alignment:
Q  312 ttgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||| |||||||| |||| |||  ||||||||||  ||||||||| ||||||||||||    
T  29136516 ttgttgttattgcttgtggttagttatatttggttattggttgtcattggtacttgctccac 29136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 37876665 - 37876604
Alignment:
Q  313 tgttgttgttgcttgttgtt-atttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||| |||||||| ||| |||||| ||||||||||  ||| ||||||||||||||||||    
T  37876665 tgttgtttttgcttgtggtttatttacatttggttattggttgccattgatacttgctccac 37876604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 49893629 - 49893536
Alignment:
Q  206 gttggaccgaactgggtaaacatttc-ttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||| ||||||||||| ||||  || ||||||||| | ||| | ||| ||||||||||||||| || |||||||||| |||||| || |||||    
T  49893629 gttgggccgaactgggtgaacaaatccttggtgttgttctctatactccactctctttatcttgattgttctttggttcgattgttatattgct 49893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 423
Target Start/End: Complemental strand, 12318399 - 12318316
Alignment:
Q  339 ttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaaca 423  Q
    |||||||||||  ||| ||||||||||||| ||| | ||  |||||||||| |||||| |||||||  | |||||||||||||||    
T  12318399 ttttggttattggttgccattgatacttgccccatgcatccaaatttcattgatgtgagatttggagct-accgaattcacaaca 12318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 12318890 - 12318846
Alignment:
Q  100 gaaccaaaagagggggttcttgggatagggttggtgccttttggg 144  Q
    |||||||| ||| ||| |||||||| |||||||||||||||||||    
T  12318890 gaaccaaatgagagggctcttgggagagggttggtgccttttggg 12318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 41136006 - 41136057
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgct 298  Q
    ||||||||||||||||||||||| |||||||||| ||   |||||||||||||    
T  41136006 ttttctctactctctttatcttg-ttattctttgattcagttgtgattttgct 41136057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 9e-56; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 3809204 - 3809011
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagag-gg 113  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||    
T  3809204 caaaggagggaacttttagggttttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 3809105  T
Q  114 ggttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||| | | ||||||||| |||||| ||  ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  3809104 ggctcttgtgaaaagggttggttcctttt-ggagaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttgggtgagt 3809011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 15 - 207
Target Start/End: Original strand, 5043301 - 5043492
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||||||||||||| || ||||||||||||||  | |||||||||||||||| |||||||||||||||||||||| ||    
T  5043301 caaaggagggaacttttagggttttagatactaaagattgagggtctttgggtgaggttcaaagcttcaagatgagaatcttggagaaccaaaagagagg 5043400  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||||| | |||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||  |||||||||| ||||||||||    
T  5043401 gctcttgggaaaagggttggtgccttttggg--aagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaatttgggtgagt 5043492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 17762661 - 17762854
Alignment:
Q  16 aaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggggg 115  Q
    |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||    
T  17762661 aaaggagagaacttttagggttttagatactaaaggttgaggatctttgggtgaagttcaaggcttcaagatgtgaatcttggagaaccaaaagaggggg 17762760  T
Q  116 ttcttgggatagggtt-ggtgccttttgggtaa-agattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
     ||||| || | |||| |||||||||||||    |||||||||||| |||||||||||||||| |||||||  ||| |||||||||||||||||    
T  17762761 ctcttgtgaaaaggtttggtgccttttgggggttagattcatggggttgggaaacacatgagtggagagtcttttgggagcaacttgggtgagt 17762854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 21593347 - 21593531
Alignment:
Q  23 agaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttctt-g 121  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||||  | |||||| || ||||||||||||||||||||||||||||||||| |||| |    
T  21593347 agaacttttagggttttagatactaaatgttgagggtctttgggtgaggttcaaagatttaagatgtgaatcttggagaaccaaaagagggggctcttgg 21593446  T
Q  122 ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||| |||||||||||||||| ||  ||||||||||||| ||| |||||||||||| |||||||| || ||||||||||||||||||    
T  21593447 ggaaagggttggtgcctttt-ggagaagattcatggggttggaaaacacatgagtggagagtcatttttgagcaacttgggtgagt 21593531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 26800443 - 26800634
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||  | |||||||||||||||||| ||| |||| |||||||||||||    
T  26800443 caaaggagaaaacttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtggatcatggataaccaaaagaggg 26800542  T
Q  114 ggttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgag 206  Q
    || ||||||| | | |||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  26800543 ggctcttgggaaaaaggttggtgccttttggg-gaagattcat-gggatgggaaacacatgagtggagagtctattgagagcaacttgggtgag 26800634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 2973435 - 2973242
Alignment:
Q  15 caaaggagagaacttttagggatt-tagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    |||||||| |||||||||||| || ||||||||||||||| | ||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  2973435 caaaggagggaacttttagggtttgtagatactaaaggttgaaggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 2973336  T
Q  114 ggttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    || ||||| | | ||||||||||| |||| ||  ||||||||||||| |||||||||||||| |  ||||||| |||||| ||||||||||||||    
T  2973335 ggctcttgtgaaaagggttggtgcttttttgg-gaagattcatggggttgggaaacacatgaatgcagagtcatttgtgaacaacttgggtgagt 2973242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 40 - 207
Target Start/End: Complemental strand, 603550 - 603383
Alignment:
Q  40 agatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttg-ggatagggttggtgcct 138  Q
    ||||| |||||||| ||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  603550 agatagtaaaggttgagggtctttggatgaggttcaaagcttcaagatgtgaatcttggagaaccaaaagagggggctcttgaggaaagggttggtgcct 603451  T
Q  139 tttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||| ||  ||||||||||||| |||||||||||||||| ||| |||  |||||||||||||||||||||    
T  603450 ttt-ggagaagattcatggggttgggaaacacatgagtggagtgtcctttgtgagcaacttgggtgagt 603383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 206 - 423
Target Start/End: Original strand, 26800734 - 26800969
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||||||||    
T  26800734 gttggaccgaactggatgaacatttcttggtgttgttatcttttctctactctttttatcttgtttatcttttggttagattgtggttttgctatgcact 26800833  T
Q  306 agatt----------------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcatt 389  Q
     | ||                ||||||||| |||||||| || |||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  26800834 tgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgccattgatacttgctccacgaatctaaatttcatt 26800933  T
Q  390 aatgtgaaatttggaattga--ccgaattcacaaca 423  Q
     ||||||  |||| | ||||  ||||||||||||||    
T  26800934 gatgtgaggtttgaatttgagtccgaattcacaaca 26800969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 22425321 - 22425136
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| ||||||| |||| ||||||||||||||||| ||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||||    
T  22425321 caaaggagggaacttt-agggttttagatactaaaggttgagggtctttgggtgtggttcagagcttcaagatgtgaatcttggagaaccaaaagagggg 22425223  T
Q  115 g--ttcttgggat-agggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaactt 199  Q
    |   ||||||||| ||||||||||| |||||||  ||||||||||||| || |||||||||| ||  ||||||| ||  |||||||||    
T  22425222 ggcctcttgggataagggttggtgcattttggg-gaagattcatggggttgtgaaacacatgggtgaagagtcatttaagagcaactt 22425136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 206 - 312
Target Start/End: Original strand, 5043774 - 5043880
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||| ||||||| ||||||||||||||    
T  5043774 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatttcttggttggattgtggttttgctatgcact 5043873  T
Q  306 agattat 312  Q
     ||||||    
T  5043874 tgattat 5043880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 26830619 - 26830427
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| |||||||| |||||| | |||||||||| ||   | | ||| |||||||||||||||||||||||||||||||||| |    
T  26830619 caaaggagggaacttttagggttttagataataaaggctgagggtctttgagtaaggtttaaaacttcaagatgtgaatcttggagaaccaaaagaggag 26830520  T
Q  115 gttcttggg-atagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
      ||||||| | | |||||||||||||| ||  ||||||||||||| ||||||||| |||||   ||||||| |||||||||||||||| ||||    
T  26830519 tctcttgggaaaaaggttggtgcctttt-ggagaagattcatggggttgggaaacagatgagcgcagagtcatttgtgagcaacttgggcgagt 26830427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 25072858 - 25073015
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagaggg 113  Q
    ||||| || |||||||||||| |||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||| ||||||| |||| |||    
T  25072858 caaagaagtgaacttttagggtatttagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatctttgagaacccaaag-ggg 25072956  T
Q  114 ggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    || |||||| | |||| | |||||| ||||| | |||||||| ||| | ||||||||||    
T  25072957 ggctcttggaaaagggattgtgcctcttgggaagagattcatagggtttggaaacacat 25073015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 22424847 - 22424758
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  22424847 gttggaccgtactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttgtttatccttaggttagattgtggtttt 22424758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 17757813 - 17757949
Alignment:
Q  73 tcaaagcttcaagatgtgaatcttggagaaccaaaagagggggttcttgggata-gggttggtgccttttgggtaa-agattcatggggatgggaaacac 170  Q
    ||||||||| ||||||||||| |||||||||||||| |||||| ||||| || | |||||||||| |||||||    |||||||||||| ||||||||||    
T  17757813 tcaaagcttgaagatgtgaatgttggagaaccaaaatagggggctcttgtgaaaagggttggtgcattttgggggttagattcatggggttgggaaacac 17757912  T
Q  171 atgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    |||||| |||||||  |||||||||||||||||||||    
T  17757913 atgagtggagagtcttttgtgagcaacttgggtgagt 17757949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 21589076 - 21589176
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcac 304  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| |||| || ||||||||||||||| || ||| ||||||| |||||||||||||    
T  21589076 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttccttatcttgtttattccttagttggattgtggttttgctatgcac 21589175  T
Q  305 t 305  Q
    |    
T  21589176 t 21589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 429
Target Start/End: Original strand, 25073760 - 25073943
Alignment:
Q  244 tcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcactagatt----attgttgttgttgcttgttgttatttact 339  Q
    |||||||||| |||||||||||||||||||||||||||| |||  || |||||| || |||| | ||    |||||||||||||||||| |||||||       
T  25073760 tcttttctctgctctctttatcttgtttattctttggtttgatattggttttgcaatacacttggttctagattgttgttgttgcttgtggttattt--- 25073856  T
Q  340 tttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaattgaccgaattcacaacaagttta 429  Q
      | |||||| ||| |||||||||||||  |||||||| |||| || ||||||| || ||||||||||| ||||||||||||||| ||||    
T  25073857 --ttgttattgattatcattgatacttgtcccacgaatctaaactttattaatgcgagatttggaattg-ccgaattcacaacaatttta 25073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 17758171 - 17758270
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctct-actctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| || | || ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17758171 ttggaccgaactaggtgaacatttcttggtgttgttatctttccttttacgctctttatcttgtttatcctttggttagattgtggttttgctatgcact 17758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 17763138 - 17763237
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctct-actctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||| | ||||||||||||||||| || |||||||||||||||  ||||||||||||||    
T  17763138 ttggaccgaactaggtgaacatttcttggtgttgttatcttttcttttactctctttatcttgttcatcctttggttagattgtagttttgctatgcact 17763237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 2972837 - 2972720
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt-- 407  Q
    |||||||||||||| |||| ||||||||| |||| |||||  ||| ||||||||||||||| |||||||||||||||||| ||||||  |||||||||      
T  2972837 tattgttgttgttgtttgtggttatttacatttgattattggttgccattgatacttgctcaacgaatttaaatttcattgatgtgatgtttggaatttg 2972738  T
Q  408 -gaccgaattcacaacaa 424  Q
     |||| ||||||||||||    
T  2972737 agaccaaattcacaacaa 2972720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 26830146 - 26830043
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctcta--ctctctttatcttgtttattctttg-gttagattgtgattttgctatg 301  Q
    |||| ||| ||||||||| ||||||||||||||||| |||||||||| ||  ||||||||||||||||||||| |||  || ||||||| ||||||||||    
T  26830146 agtttgactgaactgggtgaacatttcttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgctatg 26830047  T
Q  302 cact 305  Q
    ||||    
T  26830046 cact 26830043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 3808685 - 3808628
Alignment:
Q  246 ttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  3808685 ttttctctactctctttatcttgtttatcctttggttagattatggttttgctatgca 3808628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 603111 - 603007
Alignment:
Q  205 agttggaccgaactgggtaaacatt-tcttggtgttgatatct---tttctctactctctttatcttgtttattctttggttagattgtgattttgctat 300  Q
    |||||||||||||||||| |||| | ||||| ||||| | |||   ||||||||||||||||||||||||||| | |||||| ||||||| |||| ||||    
T  603111 agttggaccgaactgggtcaacaatctcttgatgttgttgtctatttttctctactctctttatcttgtttatgccttggttggattgtggttttactat 603012  T
Q  301 gcact 305  Q
    |||||    
T  603011 gcact 603007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 5043895 - 5043958
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||| ||||||||    
T  5043895 tattgttgttgttgcttgaggttatttacatttggttattggttgtcattgatacgtgctccac 5043958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 21593809 - 21593860
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctact 256  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  21593809 agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttact 21593860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 26830022 - 26829959
Alignment:
Q  310 tattgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    |||||||||| |||||||| ||||||||| ||||||||||  ||  ||||||||||||||||||    
T  26830022 tattgttgttattgcttgtggttatttacatttggttattggtttccattgatacttgctccac 26829959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 17758292 - 17758354
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||| |||||||  ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  17758292 attgttgttattgcttgcggttatttacatttggttattggttgccattgatacttgctccac 17758354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 17763259 - 17763321
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||| ||| ||||  |||||||| ||||||||||  ||||||||||||||||||||||    
T  17763259 attgttgttattgtttgtgattatttacatttggttattggttgtcattgatacttgctccac 17763321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 22424724 - 22424662
Alignment:
Q  311 attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccac 373  Q
    ||||||||||||| |||| ||||||||| ||||||||||  ||  ||||||||||||||||||    
T  22424724 attgttgttgttgtttgtggttatttacatttggttattggttaccattgatacttgctccac 22424662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 305
Target Start/End: Original strand, 9572745 - 9572838
Alignment:
Q  213 cgaactgggtaaac-atttcttggtgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcact 305  Q
    |||||||||||||  |||||||| ||||| ||||||||||||  | |||||||||| | ||||||||| || ||||||| | || |||||||||    
T  9572745 cgaactgggtaaaatatttcttgatgttgttatcttttctctcgtgtctttatcttatctattctttgattcgattgtggtatttctatgcact 9572838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 12221126 - 12221094
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttggtgt 238  Q
    |||||||||||||||||||||||||||||||||    
T  12221126 gttggaccgaactgggtaaacatttcttggtgt 12221094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 80778 - 80586
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    |||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||||    
T  80778 caaaggagggaacttttagggttttagatactagaggttgagggtctttgggtgaggttcaaagcttcaagatttgaatcttggagaaccaaaagagggg 80679  T
Q  115 gttctt-gggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||  | | |||||||||||||||||||  ||||||||||||| |||||||||||||||  |||||||  |||||||||||||||||||||    
T  80678 gctcttatgaaaagggttggtgccttttggg-gaagattcatggggttgggaaacacatgagcggagagtcttttgtgagcaacttgggtgagt 80586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 205 - 424
Target Start/End: Original strand, 10634 - 10870
Alignment:
Q  205 agttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctc-tttatcttgtttattctttggttagattgtgattttgctatgca 303  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||  |||| |||| ||    
T  10634 agttggaccgaactgggtaaacatttcttggtgttgttatctttcctctactctcttttatcttgtttattctttgattagattgtagttttactataca 10733  T
Q  304 ctagatt----------------attgttgttgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttca 387  Q
    || ||||                |||||||||||||||||| ||||||| |||||||||||   ||||||||||||||| |||||| ||| |||||||||    
T  10734 cttgatttctagattaaatctagattgttgttgttgcttgtggttattttcttttggttatcggttgtcattgatactttctccacaaatctaaatttca 10833  T
Q  388 ttaatgtgaaatttggaattgaccgaattcacaacaa 424  Q
    || ||||||  |||| |||||||||||||||||||||    
T  10834 ttgatgtgaggtttgaaattgaccgaattcacaacaa 10870  T

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Target: scaffold0176 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 18495 - 18304
Alignment:
Q  15 caaaggagagaacttttagggatttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaaagagggg 114  Q
    ||||||||| ||||| ||||  |||||||||||||||||  |||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||    
T  18495 caaaggagaaaacttataggt-tttagatactaaaggttgcgggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaacaaaaagagggg 18397  T
Q  115 gttcttg-ggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    | ||||| | | |||||||||||||||||||  |||||||||| || | | |||||||||||| |||||| | |||||||||||||| ||||||    
T  18396 gctcttgtgaaaagggttggtgccttttgggggaagattcatgagg-ttgaaaacacatgagtggagagttatttgtgagcaacttgagtgagt 18304  T

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Target: scaffold0176; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 18024 - 17927
Alignment:
Q  207 ttggaccgaactgggtaaacatttcttggtgttgatatcttttctctactctctttatcttgtttatt-ctttggttagattgtgattttgctatgca 303  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  18024 ttggatcgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattcctttggttagattgtggttttgctatgca 17927  T

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Target: scaffold0002 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 490946 - 490782
Alignment:
Q  9 gagaagcaaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctcaaagcttcaagatgtgaatcttggagaaccaaa 107  Q
    ||||| |||||||| || ||||||||| || ||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  490946 gagaaccaaaggagggagcttttagggtatgtagatactaaaggttgagggtctttgggtgaggttcaaagcttcaagatgtgaatcttggagaaccaaa 490847  T
Q  108 agagggggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacat 172  Q
    | |||||| |||| ||| ||||||||||||||| ||  | |||||||||||  ||||||||||||    
T  490846 aaagggggctctttggagagggttggtgcctttaggtgagagattcatgggattgggaaacacat 490782  T

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Target: scaffold0197 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 1901 - 1709
Alignment:
Q  15 caaaggagagaacttttaggg-atttagatactaaaggtttagggtctttgggtggtgctc-aaagcttcaagatgtgaatcttggagaaccaaaagagg 112  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||    
T  1901 caaatgagagaacttttagggtatttagatactaaaggttgaaggtctttgggtga-gctccaaagcttcaagatgtgaatcttgaagaaccaaaagagg 1803  T
Q  113 gggttcttgggatagggttggtgccttttgggtaaagattcatggggatgggaaacacatgagtagagagtcaattgtgagcaacttgggtgagt 207  Q
    ||  |||||||  ||| |||||| |||||| | | |||||||||  | || ||||||||| |   ||||||| ||||||||||||||||| ||||    
T  1802 ggactcttgggcgaggcttggtgtcttttgtggagagattcatgtagttgagaaacacatcatatgagagtc-attgtgagcaacttgggcgagt 1709  T

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Target: scaffold0197; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 1418 - 1328
Alignment:
Q  206 gttggaccgaactgggtaaacatttcttgg-tgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgatttt 295  Q
    |||||||| || |||||||||| ||||| | ||||  | |||| ||| ||||||||||||||| |||||| ||||||| ||||||| ||||    
T  1418 gttggaccaaattgggtaaacaattctttgatgtttttctcttctctttactctctttatcttatttattttttggtttgattgtggtttt 1328  T

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Target: scaffold0927 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 3484 - 3377
Alignment:
Q  319 tgttgcttgttgttatttacttttggttattaattgtcattgatacttgctccacgaatttaaatttcattaatgtgaaatttggaatt---gaccgaat 415  Q
    |||||||||| ||||||||| ||| ||||||  ||| ||||||||||||||||| |||| ||||||||||| ||||||  |||||||||   ||||||||    
T  3484 tgttgcttgtggttatttacatttagttattggttgccattgatacttgctccatgaatctaaatttcattgatgtgaggtttggaatttgagaccgaat 3385  T
Q  416 tcacaaca 423  Q
    ||||||||    
T  3384 tcacaaca 3377  T

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Target: scaffold0263 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 5471 - 5400
Alignment:
Q  86 atgtgaatcttggagaaccaaaagagggggttcttgggatagggttggtgccttttgggtaaagattcatggg 158  Q
    |||| ||| |||| ||||||||||||  |  |||||||| ||||| ||||||||||||||| |||||||||||    
T  5471 atgttaattttggggaaccaaaagagatgactcttgggaaagggt-ggtgccttttgggtagagattcatggg 5400  T

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