View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20985_high_33 (Length: 332)
Name: NF20985_high_33
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20985_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 18 - 319
Target Start/End: Complemental strand, 37941438 - 37941137
Alignment:
| Q |
18 |
ttaacttgatgagtagtaacaatggttcaaaagaatgggcccgaagaactcatcatgacaccattaacaacaatgattcatgtgatcatatggattaatt |
117 |
Q |
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| T |
37941438 |
ttaacttgatgagtagtaacaatggttcaaaagaatgggcccgaagaactcatcatgacaccattaacaacaatgattcatgtgatcatatggattaatt |
37941339 |
T |
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| Q |
118 |
aattgtttaatttcataagtgtattttgtaaagcaactgatgctagtataattaagttcactcattatgtttttgttcatgaaaaatggtattggtagta |
217 |
Q |
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| T |
37941338 |
aattgtttaatttcataagtgtaatttgtaaagcaactgatgctagtataattaagttcactcattatgtttttgttcatgaaaaatggtactggtagta |
37941239 |
T |
|
| Q |
218 |
taattctaatgtatgaaagagtgaattttggtatttcctcaacttaactatatgaccatcaaatcaattaaacatttcttctttgccttgtacttttggt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37941238 |
taattctaatgtatgaaagagtgaattttggtatttcctcaacttaactatatgaccatcaaatcaattaaacatttcttctttgccttgtacttttggt |
37941139 |
T |
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| Q |
318 |
ct |
319 |
Q |
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|| |
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| T |
37941138 |
ct |
37941137 |
T |
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