View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20985_low_16 (Length: 450)
Name: NF20985_low_16
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20985_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 15 - 440
Target Start/End: Complemental strand, 32140198 - 32139773
Alignment:
| Q |
15 |
ataaacatgaactaaaaaatcataaaagagaggaggctgaaaagagggtagagttagagaggagaaccataaaaattgagacgggtagagataagaaaaa |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32140198 |
ataaacatgaactaaaaaatcataaaagagaggaggctgaaaagagggtagagttagagaggagaaccataaaaattgagaggggtagagataagaaaaa |
32140099 |
T |
|
| Q |
115 |
gaagagtaaatgtagaaccatatacctctagccacacacatcaccgctctagtttcactcatatgtaaatcaccaccatgaaactccattatcacataac |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32140098 |
gaagagtaaatgtagaaccatatacctctagccacacacatcaccactccagtttcactcatatgtaaatcaccaccatgaaactccattatcacataac |
32139999 |
T |
|
| Q |
215 |
ccacggtttcaaatttcaatcactgcaactcaaaaagaaaattttcatcaatcaccagcctccattcttgtgtgttttctgaacaaaattctacaaaggg |
314 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
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| T |
32139998 |
ccacggtttcaaatttcaatcactgcaacccaaaaagaaaattttcatcaatcaccaccctccattctcgtgtgttttctgaacaaaattctacaaaggg |
32139899 |
T |
|
| Q |
315 |
ctatcgagtcccccttttcttttttcttcttctgtcatgttcacgttaaacttaaaattgatatctaattattattacgccttactgtattgcatttatc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
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| T |
32139898 |
ctatcgagtcccccttttcttttttcttcttctgtcatgttcacgttaaacttaaaattgttatctaattattattacgccttattgtattgcatttatc |
32139799 |
T |
|
| Q |
415 |
tatttaggctctacactaattttctt |
440 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32139798 |
tatttaggctctacactaattttctt |
32139773 |
T |
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