View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20985_low_17 (Length: 449)

Name: NF20985_low_17
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20985_low_17
NF20985_low_17
[»] chr2 (75 HSPs)
chr2 (12-433)||(5137536-5137961)
chr2 (280-339)||(3197082-3197141)
chr2 (292-343)||(12124540-12124591)
chr2 (287-343)||(4056785-4056841)
chr2 (291-343)||(18231487-18231539)
chr2 (292-343)||(19179065-19179116)
chr2 (294-341)||(28771579-28771626)
chr2 (292-343)||(39761433-39761484)
chr2 (292-339)||(43117205-43117252)
chr2 (288-338)||(20120732-20120782)
chr2 (287-344)||(12124678-12124735)
chr2 (292-337)||(35685076-35685121)
chr2 (288-340)||(10156015-10156067)
chr2 (292-340)||(24593374-24593422)
chr2 (292-339)||(13394997-13395044)
chr2 (292-343)||(24393240-24393291)
chr2 (292-343)||(40099398-40099449)
chr2 (287-338)||(44488020-44488071)
chr2 (292-338)||(6141220-6141266)
chr2 (292-338)||(12413493-12413539)
chr2 (292-338)||(12425553-12425599)
chr2 (289-339)||(21497666-21497716)
chr2 (294-339)||(34464426-34464471)
chr2 (288-340)||(2429014-2429066)
chr2 (292-343)||(7052768-7052820)
chr2 (292-340)||(7413204-7413252)
chr2 (291-339)||(9383223-9383271)
chr2 (287-339)||(16877123-16877175)
chr2 (287-339)||(16989254-16989306)
chr2 (295-339)||(25625136-25625180)
chr2 (289-337)||(26133532-26133580)
chr2 (295-339)||(28277694-28277738)
chr2 (295-343)||(31963084-31963132)
chr2 (291-339)||(32957557-32957605)
chr2 (291-343)||(35727432-35727484)
chr2 (291-338)||(4897543-4897590)
chr2 (291-338)||(4944937-4944984)
chr2 (298-345)||(20517015-20517062)
chr2 (292-339)||(20565090-20565137)
chr2 (292-339)||(21482534-21482581)
chr2 (294-341)||(24393735-24393782)
chr2 (292-343)||(24548006-24548057)
chr2 (292-339)||(25186257-25186304)
chr2 (293-343)||(18910549-18910599)
chr2 (288-346)||(19512847-19512905)
chr2 (289-339)||(22523024-22523074)
chr2 (292-338)||(29734691-29734737)
chr2 (289-339)||(37320529-37320579)
chr2 (294-343)||(10065468-10065517)
chr2 (292-345)||(10332290-10332343)
chr2 (292-341)||(15654884-15654933)
chr2 (288-337)||(16221357-16221406)
chr2 (287-348)||(20017066-20017127)
chr2 (292-341)||(23407033-23407082)
chr2 (291-324)||(26400765-26400798)
chr2 (280-344)||(28202400-28202465)
chr2 (294-339)||(39068725-39068770)
chr2 (294-339)||(44496717-44496762)
chr2 (298-338)||(2328613-2328653)
chr2 (292-332)||(4509543-4509583)
chr2 (291-323)||(9391778-9391810)
chr2 (291-339)||(9842216-9842264)
chr2 (294-338)||(18324911-18324955)
chr2 (292-339)||(19976152-19976200)
chr2 (292-332)||(21558821-21558861)
chr2 (291-335)||(22267516-22267560)
chr2 (292-332)||(24592861-24592901)
chr2 (292-332)||(25598577-25598617)
chr2 (287-339)||(33063985-33064037)
chr2 (298-338)||(33832690-33832730)
chr2 (287-339)||(34977203-34977255)
chr2 (288-339)||(35456831-35456883)
chr2 (291-339)||(40967385-40967433)
chr2 (280-315)||(42181305-42181341)
chr2 (280-339)||(44526127-44526187)
[»] chr4 (58 HSPs)
chr4 (280-338)||(56204947-56205005)
chr4 (288-338)||(28435259-28435309)
chr4 (292-338)||(34247440-34247486)
chr4 (287-343)||(2649743-2649799)
chr4 (295-339)||(14577525-14577569)
chr4 (299-343)||(18915068-18915112)
chr4 (292-339)||(7230279-7230326)
chr4 (285-332)||(12439670-12439717)
chr4 (292-343)||(46676513-46676564)
chr4 (292-343)||(56497623-56497674)
chr4 (288-338)||(36071144-36071194)
chr4 (280-337)||(37921747-37921805)
chr4 (294-339)||(8027414-8027459)
chr4 (290-343)||(12058314-12058367)
chr4 (280-344)||(16304100-16304165)
chr4 (288-336)||(22040652-22040700)
chr4 (292-344)||(24785477-24785529)
chr4 (292-344)||(24822737-24822789)
chr4 (287-339)||(29908055-29908107)
chr4 (291-339)||(30380529-30380577)
chr4 (288-332)||(42756117-42756161)
chr4 (292-332)||(49949340-49949380)
chr4 (292-332)||(56551607-56551647)
chr4 (292-339)||(2186348-2186395)
chr4 (292-339)||(20799409-20799456)
chr4 (294-337)||(22279537-22279580)
chr4 (292-339)||(23247613-23247660)
chr4 (292-343)||(25978313-25978363)
chr4 (292-339)||(36203235-36203282)
chr4 (292-339)||(49473644-49473691)
chr4 (292-339)||(50362154-50362201)
chr4 (292-339)||(52270045-52270092)
chr4 (299-345)||(2034117-2034163)
chr4 (292-338)||(19908692-19908738)
chr4 (292-338)||(20383488-20383534)
chr4 (292-338)||(31780745-31780791)
chr4 (288-338)||(34595947-34595997)
chr4 (292-338)||(38416057-38416103)
chr4 (290-332)||(50650940-50650982)
chr4 (292-337)||(6789441-6789486)
chr4 (294-339)||(10303528-10303573)
chr4 (292-341)||(11166683-11166732)
chr4 (292-337)||(11949778-11949823)
chr4 (294-339)||(12322672-12322717)
chr4 (290-339)||(23809948-23809997)
chr4 (294-339)||(38812866-38812911)
chr4 (290-339)||(55421582-55421631)
chr4 (288-339)||(19731140-19731192)
chr4 (294-338)||(19854565-19854609)
chr4 (290-338)||(20921855-20921903)
chr4 (292-324)||(21114320-21114352)
chr4 (291-339)||(21465610-21465658)
chr4 (280-316)||(31879880-31879916)
chr4 (289-337)||(36478992-36479040)
chr4 (287-339)||(43374282-43374334)
chr4 (292-332)||(43782320-43782360)
chr4 (292-344)||(50442762-50442814)
chr4 (294-346)||(55924804-55924856)
[»] chr8 (53 HSPs)
chr8 (288-345)||(8717486-8717543)
chr8 (292-344)||(42208484-42208536)
chr8 (292-343)||(19778060-19778111)
chr8 (292-339)||(27587220-27587267)
chr8 (288-345)||(12714381-12714438)
chr8 (292-345)||(17704006-17704059)
chr8 (292-343)||(30623288-30623339)
chr8 (287-339)||(6447188-6447240)
chr8 (281-337)||(7968944-7969000)
chr8 (289-341)||(13477897-13477949)
chr8 (292-339)||(7553678-7553725)
chr8 (292-339)||(11708985-11709032)
chr8 (281-340)||(15079156-15079215)
chr8 (292-339)||(27750919-27750966)
chr8 (288-335)||(38489213-38489260)
chr8 (292-339)||(39821883-39821930)
chr8 (280-335)||(40919362-40919417)
chr8 (288-343)||(41188851-41188906)
chr8 (292-343)||(44019544-44019595)
chr8 (288-330)||(5179801-5179843)
chr8 (292-338)||(12910821-12910867)
chr8 (292-337)||(15664511-15664557)
chr8 (292-346)||(29652210-29652264)
chr8 (292-338)||(30427731-30427777)
chr8 (292-337)||(9656012-9656057)
chr8 (292-345)||(10320489-10320542)
chr8 (291-332)||(11603851-11603892)
chr8 (294-339)||(13575288-13575333)
chr8 (292-337)||(15438454-15438499)
chr8 (292-337)||(15529758-15529803)
chr8 (292-341)||(19488297-19488346)
chr8 (294-339)||(23816789-23816834)
chr8 (292-341)||(31888023-31888072)
chr8 (290-339)||(32555253-32555302)
chr8 (292-332)||(444419-444459)
chr8 (292-332)||(1244720-1244760)
chr8 (288-324)||(4830022-4830058)
chr8 (291-335)||(7869655-7869699)
chr8 (292-324)||(8442502-8442534)
chr8 (298-338)||(8910002-8910042)
chr8 (299-343)||(12208710-12208754)
chr8 (299-343)||(12453138-12453182)
chr8 (295-343)||(15299614-15299662)
chr8 (295-343)||(15479983-15480031)
chr8 (291-339)||(22847471-22847519)
chr8 (287-339)||(27718904-27718956)
chr8 (298-338)||(28271948-28271988)
chr8 (288-324)||(32192908-32192944)
chr8 (287-339)||(33620897-33620949)
chr8 (288-324)||(37141371-37141407)
chr8 (295-339)||(37938494-37938538)
chr8 (289-337)||(42982886-42982934)
chr8 (292-332)||(43962039-43962079)
[»] scaffold0154 (1 HSPs)
scaffold0154 (291-343)||(10771-10823)
[»] chr6 (38 HSPs)
chr6 (288-343)||(14441466-14441521)
chr6 (287-348)||(788856-788917)
chr6 (292-339)||(32193874-32193921)
chr6 (289-339)||(2105904-2105954)
chr6 (281-339)||(18256882-18256940)
chr6 (289-339)||(32053787-32053837)
chr6 (291-328)||(14679135-14679172)
chr6 (290-343)||(26587387-26587440)
chr6 (292-323)||(4467293-4467324)
chr6 (292-343)||(8569704-8569755)
chr6 (292-339)||(9333730-9333777)
chr6 (280-338)||(9923240-9923299)
chr6 (292-343)||(18254116-18254167)
chr6 (296-343)||(20568310-20568357)
chr6 (292-339)||(20744137-20744184)
chr6 (287-338)||(21936043-21936094)
chr6 (280-339)||(26320566-26320625)
chr6 (292-343)||(30960068-30960119)
chr6 (288-339)||(33938690-33938741)
chr6 (293-339)||(10780123-10780169)
chr6 (288-338)||(15169931-15169981)
chr6 (288-338)||(15178703-15178753)
chr6 (295-341)||(17829326-17829372)
chr6 (292-338)||(22576160-22576206)
chr6 (288-338)||(24623328-24623378)
chr6 (290-339)||(866298-866347)
chr6 (294-339)||(7083009-7083054)
chr6 (289-338)||(28757036-28757085)
chr6 (292-341)||(30639441-30639490)
chr6 (280-343)||(3808120-3808184)
chr6 (292-340)||(4450260-4450308)
chr6 (293-345)||(17382077-17382129)
chr6 (294-338)||(26522472-26522516)
chr6 (284-324)||(28318041-28318081)
chr6 (291-339)||(30374546-30374594)
chr6 (292-324)||(31971543-31971575)
chr6 (292-332)||(32149144-32149184)
chr6 (292-332)||(33824887-33824927)
[»] chr5 (53 HSPs)
chr5 (288-343)||(34206222-34206277)
chr5 (280-341)||(21316879-21316940)
chr5 (291-339)||(36321508-36321556)
chr5 (292-339)||(16133080-16133127)
chr5 (292-339)||(22522816-22522863)
chr5 (288-343)||(27679493-27679548)
chr5 (292-346)||(18278274-18278328)
chr5 (292-345)||(11017169-11017222)
chr5 (291-332)||(11844452-11844493)
chr5 (290-339)||(17861978-17862027)
chr5 (287-339)||(5015280-5015331)
chr5 (280-316)||(21636327-21636363)
chr5 (280-316)||(21644574-21644610)
chr5 (293-337)||(27545173-27545217)
chr5 (292-340)||(42168960-42169008)
chr5 (292-339)||(3445262-3445309)
chr5 (292-339)||(6489006-6489053)
chr5 (280-339)||(13220623-13220682)
chr5 (290-337)||(13409429-13409476)
chr5 (292-339)||(15889410-15889457)
chr5 (298-341)||(21308966-21309009)
chr5 (288-339)||(24485698-24485749)
chr5 (288-343)||(25796419-25796474)
chr5 (288-339)||(27903112-27903163)
chr5 (292-339)||(37932329-37932376)
chr5 (292-339)||(40445982-40446029)
chr5 (290-337)||(43108570-43108617)
chr5 (291-345)||(11647190-11647244)
chr5 (292-338)||(18489091-18489137)
chr5 (292-338)||(22498942-22498988)
chr5 (293-339)||(34436850-34436896)
chr5 (295-332)||(5846035-5846072)
chr5 (280-344)||(16701583-16701648)
chr5 (288-337)||(16752513-16752562)
chr5 (298-339)||(17261790-17261831)
chr5 (296-337)||(18147719-18147760)
chr5 (292-337)||(18391601-18391646)
chr5 (280-337)||(19068442-19068499)
chr5 (280-317)||(20125047-20125084)
chr5 (292-341)||(28604433-28604482)
chr5 (288-332)||(29554867-29554912)
chr5 (280-332)||(31602827-31602880)
chr5 (292-341)||(34702487-34702536)
chr5 (288-337)||(37054280-37054329)
chr5 (278-339)||(41650940-41651001)
chr5 (295-339)||(5485185-5485229)
chr5 (287-339)||(8544999-8545051)
chr5 (292-324)||(16531290-16531322)
chr5 (288-340)||(25604011-25604063)
chr5 (295-343)||(26376961-26377009)
chr5 (292-340)||(26409251-26409299)
chr5 (292-340)||(38353772-38353820)
chr5 (292-332)||(42505878-42505918)
[»] chr3 (60 HSPs)
chr3 (292-339)||(3755338-3755385)
chr3 (288-339)||(39779023-39779074)
chr3 (291-337)||(54230113-54230159)
chr3 (290-339)||(16980367-16980416)
chr3 (288-337)||(52119377-52119426)
chr3 (288-332)||(10926475-10926519)
chr3 (292-339)||(1149084-1149131)
chr3 (280-339)||(43777059-43777118)
chr3 (292-343)||(53207965-53208016)
chr3 (289-335)||(2662095-2662141)
chr3 (294-340)||(8113579-8113625)
chr3 (280-337)||(29631187-29631245)
chr3 (294-343)||(17588357-17588406)
chr3 (292-341)||(46469274-46469323)
chr3 (291-343)||(5702192-5702243)
chr3 (292-332)||(35191832-35191872)
chr3 (288-344)||(47099046-47099102)
chr3 (295-339)||(52904161-52904205)
chr3 (292-339)||(5349527-5349574)
chr3 (292-339)||(10498710-10498757)
chr3 (296-339)||(11508502-11508545)
chr3 (292-339)||(18870740-18870787)
chr3 (288-339)||(21331428-21331479)
chr3 (292-343)||(21513283-21513334)
chr3 (292-343)||(21914086-21914137)
chr3 (291-338)||(30200826-30200873)
chr3 (289-324)||(41258985-41259020)
chr3 (292-339)||(48315039-48315086)
chr3 (288-339)||(50037310-50037361)
chr3 (288-338)||(4402105-4402155)
chr3 (292-338)||(13800667-13800713)
chr3 (293-343)||(28093349-28093399)
chr3 (280-338)||(42269298-42269356)
chr3 (289-339)||(47377361-47377411)
chr3 (292-338)||(53996299-53996345)
chr3 (289-343)||(55126001-55126055)
chr3 (287-332)||(977951-977996)
chr3 (283-324)||(4564623-4564664)
chr3 (291-324)||(10594691-10594724)
chr3 (289-345)||(12043108-12043165)
chr3 (292-345)||(12976617-12976670)
chr3 (294-343)||(13992666-13992715)
chr3 (291-324)||(14741808-14741841)
chr3 (292-337)||(28266717-28266762)
chr3 (278-339)||(33223867-33223928)
chr3 (292-337)||(39869822-39869867)
chr3 (291-332)||(45254237-45254278)
chr3 (294-343)||(51882217-51882266)
chr3 (294-343)||(53681894-53681943)
chr3 (306-343)||(55198877-55198914)
chr3 (292-332)||(4216414-4216454)
chr3 (291-339)||(8127462-8127510)
chr3 (294-342)||(22486679-22486727)
chr3 (292-332)||(25441515-25441555)
chr3 (287-323)||(26973376-26973412)
chr3 (291-339)||(35392002-35392050)
chr3 (292-332)||(35863828-35863868)
chr3 (292-332)||(45096032-45096072)
chr3 (292-332)||(45431954-45431994)
chr3 (288-339)||(47313382-47313434)
[»] chr1 (71 HSPs)
chr1 (289-340)||(24124842-24124893)
chr1 (292-343)||(38448881-38448932)
chr1 (292-341)||(17283948-17283997)
chr1 (280-339)||(16533035-16533095)
chr1 (280-324)||(30548094-30548138)
chr1 (287-339)||(31890759-31890811)
chr1 (292-343)||(5907794-5907845)
chr1 (292-343)||(6000158-6000209)
chr1 (292-343)||(19620571-19620622)
chr1 (292-343)||(45140021-45140072)
chr1 (292-343)||(47528462-47528513)
chr1 (292-339)||(49183172-49183219)
chr1 (292-338)||(34521205-34521251)
chr1 (292-345)||(15803252-15803305)
chr1 (280-329)||(27023658-27023707)
chr1 (294-339)||(34733399-34733444)
chr1 (289-338)||(34808575-34808624)
chr1 (291-343)||(8148379-8148431)
chr1 (290-338)||(8253739-8253787)
chr1 (287-343)||(9639827-9639883)
chr1 (290-338)||(35011393-35011441)
chr1 (292-332)||(40613029-40613069)
chr1 (287-339)||(47719117-47719169)
chr1 (287-339)||(48681943-48681995)
chr1 (292-332)||(50638931-50638971)
chr1 (292-343)||(2817388-2817439)
chr1 (287-338)||(3393578-3393629)
chr1 (292-339)||(7574133-7574180)
chr1 (288-339)||(9413797-9413848)
chr1 (292-343)||(10132459-10132510)
chr1 (292-343)||(17221535-17221586)
chr1 (289-328)||(20481582-20481621)
chr1 (292-339)||(21400038-21400085)
chr1 (292-339)||(21638112-21638159)
chr1 (288-339)||(27533242-27533293)
chr1 (292-339)||(28032283-28032330)
chr1 (298-345)||(41677611-41677658)
chr1 (292-339)||(42045387-42045434)
chr1 (289-324)||(43843905-43843940)
chr1 (292-339)||(49875614-49875661)
chr1 (287-345)||(10843331-10843389)
chr1 (292-338)||(28039875-28039921)
chr1 (290-324)||(34429826-34429860)
chr1 (292-338)||(41926822-41926868)
chr1 (293-339)||(44641526-44641572)
chr1 (280-341)||(17643319-17643380)
chr1 (291-340)||(19396205-19396254)
chr1 (292-337)||(29987127-29987172)
chr1 (292-337)||(30561724-30561769)
chr1 (290-339)||(35473951-35474000)
chr1 (306-339)||(40693685-40693718)
chr1 (280-324)||(45190271-45190316)
chr1 (294-343)||(46707867-46707916)
chr1 (288-344)||(2613716-2613772)
chr1 (292-332)||(3509956-3509996)
chr1 (295-343)||(6809817-6809865)
chr1 (292-332)||(8269383-8269423)
chr1 (291-331)||(9872119-9872159)
chr1 (280-339)||(11014231-11014291)
chr1 (288-324)||(12500937-12500973)
chr1 (295-343)||(14520939-14520987)
chr1 (291-343)||(17396703-17396755)
chr1 (295-343)||(18056734-18056782)
chr1 (288-324)||(22821070-22821106)
chr1 (300-340)||(23228518-23228558)
chr1 (294-338)||(24631839-24631883)
chr1 (292-332)||(29739343-29739383)
chr1 (292-332)||(30795707-30795747)
chr1 (292-340)||(33577927-33577975)
chr1 (287-323)||(47417798-47417834)
chr1 (285-337)||(50263381-50263433)
[»] scaffold0238 (1 HSPs)
scaffold0238 (292-345)||(25382-25435)
[»] chr7 (54 HSPs)
chr7 (280-345)||(3953434-3953499)
chr7 (292-339)||(1399161-1399208)
chr7 (292-343)||(2618674-2618725)
chr7 (292-339)||(44558789-44558836)
chr7 (292-338)||(3533023-3533069)
chr7 (294-340)||(4340125-4340171)
chr7 (292-338)||(8615023-8615069)
chr7 (292-338)||(21050237-21050283)
chr7 (292-338)||(46987086-46987132)
chr7 (298-343)||(8227344-8227389)
chr7 (294-343)||(24991776-24991825)
chr7 (292-341)||(41029269-41029318)
chr7 (292-332)||(7872763-7872803)
chr7 (291-339)||(13044156-13044204)
chr7 (292-332)||(18714454-18714494)
chr7 (287-343)||(27263336-27263392)
chr7 (287-343)||(27270230-27270286)
chr7 (291-339)||(30857247-30857295)
chr7 (292-339)||(10244726-10244773)
chr7 (292-343)||(20521046-20521097)
chr7 (292-343)||(27544952-27545003)
chr7 (292-339)||(35222923-35222970)
chr7 (292-343)||(37451252-37451303)
chr7 (292-343)||(39280833-39280884)
chr7 (288-339)||(39926549-39926600)
chr7 (292-339)||(40762222-40762269)
chr7 (292-338)||(19599145-19599191)
chr7 (292-338)||(25888900-25888946)
chr7 (287-341)||(29461831-29461885)
chr7 (292-338)||(30296333-30296379)
chr7 (292-338)||(37864425-37864471)
chr7 (306-344)||(40890216-40890254)
chr7 (289-343)||(45272344-45272398)
chr7 (294-339)||(580943-580988)
chr7 (280-324)||(3584218-3584263)
chr7 (289-338)||(10236917-10236966)
chr7 (289-338)||(21105603-21105652)
chr7 (294-339)||(25246770-25246815)
chr7 (294-343)||(34885869-34885918)
chr7 (298-339)||(35666302-35666343)
chr7 (294-339)||(39801705-39801750)
chr7 (292-345)||(41527553-41527606)
chr7 (300-345)||(46551869-46551914)
chr7 (287-340)||(48527188-48527241)
chr7 (299-339)||(1398419-1398459)
chr7 (294-338)||(3196659-3196703)
chr7 (296-340)||(4346659-4346703)
chr7 (294-338)||(4398326-4398370)
chr7 (280-339)||(5458073-5458133)
chr7 (280-324)||(23863703-23863747)
chr7 (292-324)||(30574659-30574691)
chr7 (291-343)||(32566055-32566107)
chr7 (280-339)||(37930043-37930103)
chr7 (292-340)||(48007562-48007610)
[»] scaffold1149 (1 HSPs)
scaffold1149 (291-339)||(2331-2379)
[»] scaffold0005 (1 HSPs)
scaffold0005 (295-339)||(239806-239850)
[»] scaffold0180 (1 HSPs)
scaffold0180 (280-339)||(17731-17790)
[»] scaffold0040 (1 HSPs)
scaffold0040 (292-343)||(53792-53843)
[»] scaffold0012 (1 HSPs)
scaffold0012 (289-328)||(119966-120005)
[»] scaffold0006 (1 HSPs)
scaffold0006 (289-328)||(210090-210129)
[»] scaffold0025 (1 HSPs)
scaffold0025 (280-321)||(20015-20057)
[»] scaffold0118 (1 HSPs)
scaffold0118 (291-339)||(39997-40045)
[»] scaffold0259 (2 HSPs)
scaffold0259 (292-335)||(5416-5459)
scaffold0259 (299-339)||(19387-19427)
[»] scaffold0126 (2 HSPs)
scaffold0126 (292-339)||(34903-34950)
scaffold0126 (291-343)||(34775-34827)
[»] scaffold0334 (1 HSPs)
scaffold0334 (292-338)||(5182-5228)
[»] scaffold0122 (1 HSPs)
scaffold0122 (294-336)||(31172-31214)
[»] scaffold0117 (1 HSPs)
scaffold0117 (294-340)||(18291-18337)
[»] scaffold0044 (1 HSPs)
scaffold0044 (292-338)||(42349-42395)
[»] scaffold0041 (1 HSPs)
scaffold0041 (306-344)||(76030-76068)
[»] scaffold0026 (1 HSPs)
scaffold0026 (292-330)||(75333-75371)
[»] scaffold0567 (1 HSPs)
scaffold0567 (284-324)||(7546-7586)
[»] scaffold0188 (1 HSPs)
scaffold0188 (280-339)||(28115-28175)
[»] scaffold0038 (1 HSPs)
scaffold0038 (284-324)||(109147-109187)


Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 12 - 433
Target Start/End: Original strand, 5137536 - 5137961
Alignment:
Q  12 aatactagagaaagcaatgtcgatgttcaatcatggtaggctagctattaattcaaataacagatgaggaccaacatgttgccatccatactagtgtact 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5137536 aatactagagaaagcaatgtcgatgttcaatcatggtaggctagctattaattcaaagaacagatgaggaccaacatgttgccatccatactagtgtact 5137635  T
Q  112 aagaagctattttaatttaaggaaagctgacaagnnnnnnnngaaaacagtaaattttgttttagttattctttcattgttagaggaacaattaagcaaa 211  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  5137636 aagaagctattttaatttaaggaaagctgacaagttttttatgaaaacagtaaattttattttagttattctttcattgttagaggaacaattaaggaaa 5137735  T
Q  212 acaaataacatttagtaatgcc---nnnnnnntatataaatttcagctctaannnnnnnnnnnnnnnnngtgtttgaa-tccgaaccttgcatatatcat 307  Q
    ||||||||||||||||||||||          ||||||||||||||||||||                 ||||| |||  ||| ||||||||||||| ||    
T  5137736 acaaataacatttagtaatgccaaaaaaaatatatataaatttcagctctaattttattttattttttggtgttcgaaccccggaccttgcatatattat 5137835  T
Q  308 gcattgtccttaccaaccgagctaaactcacggggatagctctaattttagattgaaacatccactaaggactcaacaaatgcttcatatttctcaagaa 407  Q
     ||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137836 acattgtccttaccaatcgagctaaactcactagcatagctctaattttagattgaaacatccactaaggactcaacaaatgcttcatatttctcaagaa 5137935  T
Q  408 tattcaaaattccttaaagaaaatgt 433  Q
    |||||||||||||||||| |||||||    
T  5137936 tattcaaaattccttaaaaaaaatgt 5137961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 3197082 - 3197141
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  3197082 gtttgaatccgaaccttgcatatattatgcattgtccctaccaactgagctaaactcacg 3197141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 12124591 - 12124540
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12124591 accttgcatatattatgcattgtccttaccaactgagctaaactcacgggga 12124540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 4056841 - 4056785
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  4056841 tccggaccttgcatatattatgcattgtccttaccaaccgagctaagctcacaggga 4056785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 18231487 - 18231539
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  18231487 aaccttgcatatattatgcattgtccttaccaactgagctaagctcacgggga 18231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 19179065 - 19179116
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  19179065 accttgcatatattatgcattgtccttaccaactgagctaagctcacgggga 19179116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 28771626 - 28771579
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28771626 cttgcatatattatgcattgtccttaccaactgagctaaactcacggg 28771579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 39761484 - 39761433
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  39761484 accttgcatatattatgcattgtccttatcaactgagctaaactcacgggga 39761433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 43117205 - 43117252
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  43117205 accttgcatatattatgcattgtccttaccaactgagctaaactcacg 43117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 20120732 - 20120782
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  20120732 ccgaaccttgcatatattatgcattgtccttaccaactgagctaagctcac 20120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 12124735 - 12124678
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||| || ||||||||    
T  12124735 tccggaccttgcatatattatgcattgtccttaccaactgagctaagctgacggggat 12124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 35685076 - 35685121
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  35685076 accttgcatatattatgcattgtccttaccaactgagctaaactca 35685121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 10156067 - 10156015
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||    
T  10156067 ccgaaccttgcatatattatgtattgtccttaccaactgagctaagctcacgg 10156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 24593422 - 24593374
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  24593422 accttgcatatattatgcattgtccttaccaactgagctaagctcacgg 24593374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 13394997 - 13395044
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  13394997 accttgcatatatcatgcattgtccctaccaactgagctaagctcacg 13395044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 24393291 - 24393240
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||||||    
T  24393291 accttgcatatattatgcattgtccttaacaactgagctaagctcacgggga 24393240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 40099398 - 40099449
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  40099398 accttgcatatattatgcattgtccttaccaactgagctaagctcatgggga 40099449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 44488020 - 44488071
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||| ||||||| ||||||||||||||||||| || ||||||||||    
T  44488020 tccgaaccttacatatattatgcattgtccttaccaactgaactaaactcac 44488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 6141266 - 6141220
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  6141266 accttgcatatattatgcattgtccttaccaactgagataaactcac 6141220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 12413539 - 12413493
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  12413539 accttgcatatattatgcattgtccttatcaaccgagataaactcac 12413493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 12425599 - 12425553
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  12425599 accttgcatatattatgcattgtccttatcaaccgagataaactcac 12425553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 21497716 - 21497666
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||| ||||||    
T  21497716 cgaaccttgcatatattatgcattgttcttaccaaccgagttaagctcacg 21497666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 34464426 - 34464471
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  34464426 cttgcatatattatgcattgtccataccaactgagctaaactcacg 34464471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 2429066 - 2429014
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||| ||||||| ||||||||||||||||||| || |||| |||||||    
T  2429066 ccgaaccttacatatattatgcattgtccttaccaactgaactaagctcacgg 2429014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 7052820 - 7052768
Alignment:
Q  292 accttgcatat-atcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  7052820 accttgcatattattatgcattgtccttaccaactgagctaagctcacgggga 7052768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 7413204 - 7413252
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    |||||| |||||| ||||||||||||||||||| ||||||| |||||||    
T  7413204 accttgtatatattatgcattgtccttaccaactgagctaagctcacgg 7413252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 9383223 - 9383271
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  9383223 aaccttgcatatattatgcattgtccataccaactgagctaagctcacg 9383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 16877175 - 16877123
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||||| ||||||||||| ||||| | ||||||| ||||||    
T  16877175 tccgaaccttgcatatattatgcattgtccataccagctgagctaagctcacg 16877123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 16989306 - 16989254
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||||| ||||||||||| ||||| | ||||||| ||||||    
T  16989306 tccgaaccttgcatatattatgcattgtccataccagctgagctaagctcacg 16989254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 25625180 - 25625136
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||| ||||||||||||||||||||| ||||||| ||||||    
T  25625180 ttgcatatttcatgcattgtccttaccaactgagctaagctcacg 25625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 26133532 - 26133580
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||||||||| ||||||||||||||||||| ||| ||| ||||    
T  26133532 cgaaccttgcatatattatgcattgtccttaccaactgagttaagctca 26133580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 28277694 - 28277738
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| |||||||||||||||||||  |||||||||||||    
T  28277694 ttgcatatattatgcattgtccttaccaactaagctaaactcacg 28277738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 31963084 - 31963132
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| ||||||||||||||||||| |||||| ||||| |||||    
T  31963084 ttgcatatattatgcattgtccttaccaactgagctatactcatgggga 31963132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 32957557 - 32957605
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||||||||    
T  32957557 aaccttacatatattatgcattgttcataccaaccgagctaaactcacg 32957605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 35727484 - 35727432
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| ||||||||| ||||||||| ||| ||| ||||||||||    
T  35727484 aaccttgcatatattatgcattgttcttaccaactgagttaagctcacgggga 35727432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 4897590 - 4897543
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  4897590 aaccttgcatatattatgcattgtccttaccaactgagttaagctcac 4897543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 4944984 - 4944937
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  4944984 aaccttgcatatattatgcattgtccttaccaactgagttaagctcac 4944937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 20517062 - 20517015
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||| ||||||||| ||||||||| |||||||||||||| |||||    
T  20517062 catatattatgcattgttcttaccaactgagctaaactcacgaggata 20517015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 20565090 - 20565137
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  20565090 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 20565137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 21482534 - 21482581
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||||||    
T  21482534 accttgcatatattatacattatccttaccaactgagctaaactcacg 21482581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 24393782 - 24393735
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    |||||||| || ||||||||||||||| ||| ||||||||||||||||    
T  24393782 cttgcatacattatgcattgtccttactaactgagctaaactcacggg 24393735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 24548057 - 24548006
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||| |||||| ||| ||||||||||||||| ||||||| ||||||||||    
T  24548057 accttgaatatattatggattgtccttaccaactgagctaagctcacgggga 24548006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 25186257 - 25186304
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| || |||| ||||||||||||||    
T  25186257 accttgcatatattatgcattgtccatatcaactgagctaaactcacg 25186304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 18910549 - 18910599
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||| |||| |||||||||||||| ||| ||| ||||||||||    
T  18910549 ccttgcatatattatgcgttgtccttaccaactgagataagctcacgggga 18910599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 346
Target Start/End: Complemental strand, 19512905 - 19512847
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatag 346  Q
    ||||||||||||||||  |||||| |||||||||| | ||| ||| |||||||||||||    
T  19512905 ccgaaccttgcatataatatgcatcgtccttaccagctgagttaagctcacggggatag 19512847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 22523024 - 22523074
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| ||| ||||||| ||||||| ||||||| ||||||    
T  22523024 cgaaccttgcatatattatgtattgtccataccaactgagctaagctcacg 22523074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 29734737 - 29734691
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| || |||| |||||||||||||    
T  29734737 accttgcatatattatgcattgtccatatcaactgagctaaactcac 29734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 37320529 - 37320579
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| |||||||||| |||||||| ||| ||| ||||||    
T  37320529 cgaaccttgcatatattatgcattgtctttaccaactgagttaagctcacg 37320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 10065517 - 10065468
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| |||||||||||||||||||  ||||||  |||||||||    
T  10065517 cttgcatatattatgcattgtccttaccaacttagctaagttcacgggga 10065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 10332290 - 10332343
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||| ||||||| |||||||||||||| |||| ||||||| |||||| |||||    
T  10332290 accttccatatattatgcattgtccttatcaactgagctaagctcacgaggata 10332343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 15654884 - 15654933
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||| | ||||||| ||||||||||| ||||||| ||||||||    
T  15654884 accttgcatattttatgcattatccttaccaactgagctaagctcacggg 15654933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 16221357 - 16221406
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||||| | ||||||||| | ||||||| ||||||||||||    
T  16221357 ccgaaccttgcatattttatgcattgttcataccaactgagctaaactca 16221406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 20017066 - 20017127
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatagct 348  Q
    |||| ||||||||||||| ||||| ||||||||||| | ||||||| |||||| ||| ||||    
T  20017066 tccggaccttgcatatataatgcaatgtccttaccagctgagctaagctcacgaggacagct 20017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 23407033 - 23407082
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| |||||||||||  |||||||||||||  ||||||||    
T  23407033 accttgcatatattatgcattgtccaaaccaaccgagctatgctcacggg 23407082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 324
Target Start/End: Complemental strand, 26400798 - 26400765
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||| |||||||||||||||||||    
T  26400798 aaccttgcatatattatgcattgtccttaccaac 26400765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 28202465 - 28202400
Alignment:
Q  280 gtttgaatccg-aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||  |||||||||| ||| ||||    
T  28202465 gtttgaatccggaaccttacatatattatgcattgtccataccaattgagctaaacttacgtggat 28202400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 39068725 - 39068770
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| |||||||||||||| |||| ||||||| ||||||    
T  39068725 cttgcatatattatgcattgtccttatcaactgagctaagctcacg 39068770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 44496717 - 44496762
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||| ||||||||||||||| ||||||| ||||||    
T  44496717 cttgcatatattatgtattgtccttaccaactgagctaagctcacg 44496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 2328613 - 2328653
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||| |||||||||| ||||||||||| ||||||||||    
T  2328613 catatattatgcattgtctttaccaaccgaactaaactcac 2328653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 4509583 - 4509543
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| || ||||||||||||    
T  4509583 accttgcatatattatgcattgtccatatcaaccgagctaa 4509543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 9391778 - 9391810
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaa 323  Q
    |||||| ||||||||||||||||||||||||||    
T  9391778 aaccttacatatatcatgcattgtccttaccaa 9391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 9842216 - 9842264
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| | ||||||||||| ||||||| ||||||| ||||||    
T  9842216 aaccttgcatattttatgcattgtccctaccaactgagctaagctcacg 9842264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 18324911 - 18324955
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  18324911 cttgcatatattatgcattgtccttaccaactgagttaagctcac 18324955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 19976200 - 19976152
Alignment:
Q  292 accttgcatat-atcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| || ||||||||||| ||||||| ||||||||||||||    
T  19976200 accttgcatattattatgcattgtccataccaactgagctaaactcacg 19976152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 21558821 - 21558861
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||| | |||||||    
T  21558821 accttgcatatattatgcattgtccttaccagctgagctaa 21558861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 22267560 - 22267516
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    |||||||||||||| ||||||||||| ||||||| ||| ||||||    
T  22267560 aaccttgcatatattatgcattgtccgtaccaactgagttaaact 22267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 24592861 - 24592901
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  24592861 accttgcatatattatgcattgtccctaccaactgagctaa 24592901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 25598577 - 25598617
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  25598577 accttgcatatattatgcattgtccataccaactgagctaa 25598617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 33064037 - 33063985
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| ||||||||||| || |||| ||||||| ||||||    
T  33064037 tccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacg 33063985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 33832690 - 33832730
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||| |||||||||| |||||||||||||||| |||||    
T  33832690 catatattatgcattgtcgttaccaaccgagctaagctcac 33832730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 34977255 - 34977203
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| ||||||||||| ||||||| ||| ||| ||||||    
T  34977255 tccggaccttgcatatattatgcattgtccataccaactgagttaagctcacg 34977203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 35456831 - 35456883
Alignment:
Q  288 ccgaaccttgcatata-tcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| | ||||||||| ||||||||| ||||||| ||||||    
T  35456831 ccgaaccttgcatatattaatgcattgttcttaccaactgagctaagctcacg 35456883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 40967385 - 40967433
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| |||||||||||||| |||| ||| ||| ||||||    
T  40967385 aaccttgcatatattatgcattgtccttatcaactgagttaagctcacg 40967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 315
Target Start/End: Original strand, 42181305 - 42181341
Alignment:
Q  280 gtttgaatc-cgaaccttgcatatatcatgcattgtc 315  Q
    ||||||||| |||||||||||||||||||||||||||    
T  42181305 gtttgaatctcgaaccttgcatatatcatgcattgtc 42181341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 44526187 - 44526127
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| | ||||||| ||||| ||||||||||| ||||||| ||||||| ||||||    
T  44526187 gtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaagctcacg 44526127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 56205005 - 56204947
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  56205005 gtttgaatccggaccttgcatatattatgcattgtccttaccaactgagttaaactcac 56204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 28435259 - 28435309
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  28435259 ccgaaccttgcatatattatgcattgtccataccaactgagctaaactcac 28435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 34247486 - 34247440
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  34247486 accttgcatatattatgcattgtccttaccaactgagctaaactcac 34247440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 2649743 - 2649799
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||| ||||||||||||| ||||||||||| ||||||| |||||||||| |||||||    
T  2649743 tccggaccttgcatatattatgcattgtccctaccaactgagctaaacttacgggga 2649799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 14577525 - 14577569
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  14577525 ttgcatatattatgcattgtccttaccaactgagctaaactcacg 14577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 343
Target Start/End: Original strand, 18915068 - 18915112
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  18915068 atatattatgcattgtccttaccaactgagctaaactcacgggga 18915112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 7230326 - 7230279
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  7230326 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 7230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 332
Target Start/End: Complemental strand, 12439717 - 12439670
Alignment:
Q  285 aatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||    
T  12439717 aatccgaaccttgcatatattatgcattgtccttatcaactgagctaa 12439670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 46676513 - 46676564
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||| |||||    
T  46676513 accttgcatatattatgcattgtccttaccaactgagctaagctcatgggga 46676564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 56497623 - 56497674
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||  ||||||| ||||||||||    
T  56497623 accttgcatatattatgcattgtccttaccaattgagctaagctcacgggga 56497674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 36071194 - 36071144
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||| ||||||| ||||||||||||||||||| || ||||||||||    
T  36071194 ccgaaccttacatatattatgcattgtccttaccaactgacctaaactcac 36071144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 37921805 - 37921747
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||| | ||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  37921805 gtttgaatcccggaccttgcatatattatgcattgtccttactaactgagctaaactca 37921747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 8027414 - 8027459
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  8027414 cttgcatatattatgcattatccttaccaactgagctaaactcacg 8027459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 12058367 - 12058314
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||| ||||||| |||||||| || |||||||||||| |||||    
T  12058367 gaaccttgcatatattatgcattatccttaccgactgagctaaactcatgggga 12058314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 16304100 - 16304165
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    |||||||||| | ||||||||||||| ||||||||||| ||||||| |||||||||| ||| ||||    
T  16304100 gtttgaatcccggaccttgcatatattatgcattgtccataccaactgagctaaacttacgaggat 16304165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 22040700 - 22040652
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactc 336  Q
    ||||||||||||||||| ||||||||||| || |||| |||||||||||    
T  22040700 ccgaaccttgcatatattatgcattgtccatatcaactgagctaaactc 22040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 24785477 - 24785529
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    |||||| |||||| ||||||||||||||||||| ||||| | |||||||||||    
T  24785477 accttgtatatattatgcattgtccttaccaactgagcttagctcacggggat 24785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 344
Target Start/End: Complemental strand, 24822789 - 24822737
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    |||||| |||||| ||||||||||||||||||| ||||| | |||||||||||    
T  24822789 accttgtatatattatgcattgtccttaccaactgagcttagctcacggggat 24822737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 29908107 - 29908055
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||    
T  29908107 tccggaccttgcatatattatgcattgtccttaccaactgagttaagctcacg 29908055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 30380577 - 30380529
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||||||    
T  30380577 aaccttgcatatattatacattgtccttaccaactgagttaaactcacg 30380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 42756117 - 42756161
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||    
T  42756117 ccgaaccttgcatatattatgcattgtccttatcaactgagctaa 42756161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 49949380 - 49949340
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  49949380 accttgcatatattatgcattgtccttaccaactgagctaa 49949340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 56551607 - 56551647
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  56551607 accttgcatatattatgcattgtccttaccaactgagctaa 56551647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 2186348 - 2186395
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  2186348 accttgcatatattatgcattgtccataccaactgagctaagctcacg 2186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 20799409 - 20799456
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  20799409 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 20799456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 22279537 - 22279580
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  22279537 cttgcatatattatgcattgtccttaccaactgagctaagctca 22279580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 23247613 - 23247660
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| |||| |||||| ||||||||||||||| ||||||    
T  23247613 accttgcatatattatgcgttgtccataccaaccgagctaagctcacg 23247660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 25978363 - 25978313
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||||||    
T  25978363 accttgcatatattatgcattgtcctta-caactgagctaagctcacgggga 25978313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 36203282 - 36203235
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||    
T  36203282 accttgcatatattatgcattgtccttatcaactgagctaagctcacg 36203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 49473691 - 49473644
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| | ||||| ||||||    
T  49473691 accttgcatatattatgcattgtccttaccaactgggctaagctcacg 49473644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 50362154 - 50362201
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  50362154 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 50362201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 52270045 - 52270092
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  52270045 accttgcatatattatgcattgtccataccaactgagctaagctcacg 52270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 2034117 - 2034163
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    |||||| ||||||| ||| ||||||| ||||||||||||||||||||    
T  2034117 atatattatgcattatccataccaactgagctaaactcacggggata 2034163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 19908738 - 19908692
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  19908738 accttgcatatattatgcattgtccttaccaactgagttaagctcac 19908692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 20383534 - 20383488
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  20383534 accttgcatatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 31780791 - 31780745
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| | ||||||||||||||||||| ||||||| |||||    
T  31780791 accttgcatattttatgcattgtccttaccaactgagctaagctcac 31780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 34595947 - 34595997
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||| || ||||||| ||||||||||||||||||| ||| |||||||||    
T  34595947 ccgaactttacatatattatgcattgtccttaccaactgagttaaactcac 34595997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 38416103 - 38416057
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| |||||    
T  38416103 accttgcatatattatgcattatccttaccaactgagctaagctcac 38416057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 332
Target Start/End: Original strand, 50650940 - 50650982
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||    
T  50650940 gaaccttacatatattatgcattgtccttatcaaccgagctaa 50650982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 6789441 - 6789486
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  6789441 accttgcatatactatgcattgtccttaccaactgagctaagctca 6789486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 10303528 - 10303573
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||| | ||||||||||||||||||| ||||||| ||||||    
T  10303528 cttgcatattttatgcattgtccttaccaactgagctaagctcacg 10303573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 11166732 - 11166683
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| || ||||||||||||||||  || ||||||||||||    
T  11166732 accttgcatatattatacattgtccttaccaactaagataaactcacggg 11166683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 11949778 - 11949823
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  11949778 accttgcatatattatgcattgtccataccaactgagctaagctca 11949823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 12322717 - 12322672
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  12322717 cttgcatatattatgcattgtccgtaccaactgagctaagctcacg 12322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 23809997 - 23809948
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| |||| |||||| ||||||| ||||||| ||||||    
T  23809997 gaaccttgcatatattatgctttgtccataccaactgagctaagctcacg 23809948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 38812866 - 38812911
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||| |||| || ||||||||||||||    
T  38812866 cttgcatatattatgcattgtccctaccgactgagctaaactcacg 38812911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 55421582 - 55421631
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| |||||||||||  |||||| ||||||| ||||||    
T  55421582 gaaccttgcatatattatgcattgtccaaaccaactgagctaagctcacg 55421631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 19731140 - 19731192
Alignment:
Q  288 ccgaaccttgcatatatca-tgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| | |||||||||||||||||  ||||||| ||||||    
T  19731140 ccgaaccttgcatatattaatgcattgtccttaccaattgagctaagctcacg 19731192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 19854609 - 19854565
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  19854609 cttgcatatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 20921855 - 20921903
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||||| || |||| ||||| ||||| |||||||||||||    
T  20921855 gaaccttgcatatattatacattatccttgccaactgagctaaactcac 20921903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 21114320 - 21114352
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||||||||||||||| |||||||    
T  21114320 accttgcatatatcatgcattgtccataccaac 21114352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 21465658 - 21465610
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||||||| ||||||||||||||| ||| ||| ||||||||||    
T  21465658 aaccttacatatattatgcattgtccttactaactgagttaaactcacg 21465610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 31879880 - 31879916
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtcc 316  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  31879880 gtttgaatccgaaacttgcatatattatgcattgtcc 31879916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 36479040 - 36478992
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||| ||||||| ||||||||||| ||||||| ||||||| ||||    
T  36479040 cgaaccttacatatattatgcattgtccataccaacagagctaagctca 36478992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 43374282 - 43374334
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| | ||||||||||| || |||| ||||||| ||||||    
T  43374282 tccgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacg 43374334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 43782320 - 43782360
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| |||||||||| |||||||| |||||||    
T  43782320 accttgcatatattatgcattgtcattaccaactgagctaa 43782360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 50442762 - 50442814
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||||| ||||||| ||| ||||||| ||||||| ||||| |||||    
T  50442762 accttgcatatattatgcattatccctaccaactgagctaagctcacagggat 50442814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 55924804 - 55924856
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatag 346  Q
    ||||||||||| ||| ||||||||||||||  ||||||| ||||| |||||||    
T  55924804 cttgcatatattatgtattgtccttaccaattgagctaagctcacagggatag 55924856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 8717486 - 8717543
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| |||||    
T  8717486 ccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggata 8717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 42208484 - 42208536
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  42208484 accttgcatatattatgcattgtccttaccaactgagctaaattcacggggat 42208536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 19778111 - 19778060
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  19778111 accttgcatatattatgcattgtccttaccaactgagctaagctcacgggga 19778060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 27587267 - 27587220
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  27587267 accttgcatatatcatgcattgtccttaccaactgagctaagctcacg 27587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 12714381 - 12714438
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||||||| ||||||||||| | ||||| |||||||||||||| |||||    
T  12714381 ccgaaccttgcatatattatgcattgtcccttccaactgagctaaactcacgaggata 12714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 17704059 - 17704006
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||    
T  17704059 accttgcatatattatgcattgtccttaccaactgagctaagctcacgaggata 17704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 30623339 - 30623288
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||    
T  30623339 accttgcatatattatgcattgtccttaccaactgagctaagctcacaggga 30623288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 6447240 - 6447188
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  6447240 tccggaccttgcatatattatgcattgtccataccaactgagttaaactcacg 6447188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 7968944 - 7969000
Alignment:
Q  281 tttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||| ||  ||||||||    
T  7968944 tttgaacccggaccttgcatatattatgcattgtccttaccaactgaattaaactca 7969000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 13477949 - 13477897
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||| |||||||||| |||||||||||||||||||  |||||| ||||||||    
T  13477949 cgaacattgcatatattatgcattgtccttaccaactcagctaagctcacggg 13477897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 7553725 - 7553678
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  7553725 accttgcatatattatgcattgtccctaccaactgagttaaactcacg 7553678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 11709032 - 11708985
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  11709032 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 11708985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 15079156 - 15079215
Alignment:
Q  281 tttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||  |||||||||||||| ||||||||||| ||||||| ||| ||| |||||||    
T  15079156 tttgaatctaaaccttgcatatattatgcattgtccctaccaactgagttaagctcacgg 15079215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 27750919 - 27750966
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||| ||||||||||||| ||||||| ||||||    
T  27750919 accttgcatatattatgcactgtccttaccaactgagctaagctcacg 27750966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 38489213 - 38489260
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    ||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  38489213 ccgaaccttgcatatatcatgcattgttcttatcaactgagttaaact 38489260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 39821930 - 39821883
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  39821930 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 39821883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 40919362 - 40919417
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    ||||||| ||| ||||||||||||| ||||||||| | ||||||| ||||||||||    
T  40919362 gtttgaacccggaccttgcatatattatgcattgttcctaccaactgagctaaact 40919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 41188851 - 41188906
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||||| || || ||||||||||||| || |||| ||||||||||    
T  41188851 ccgaaccttgcatatattatacaatgtccttaccaactgaactaagctcacgggga 41188906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 44019595 - 44019544
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||| ||||||||| |||||||  |||||||||    
T  44019595 accttgcatatattatgcattgttcttaccaactgagctaagttcacgggga 44019544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 5179843 - 5179801
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagct 330  Q
    |||||||||| |||||| ||||||||||||||||||| |||||    
T  5179843 ccgaaccttgtatatattatgcattgtccttaccaactgagct 5179801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 12910821 - 12910867
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  12910821 accttgcatatattatgcattgtccataccaactgagctaatctcac 12910867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 15664557 - 15664511
Alignment:
Q  292 accttgcatatatcatgcattgtcct-taccaaccgagctaaactca 337  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  15664557 accttgcatatattatgcattgtcctataccaactgagctaaactca 15664511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 346
Target Start/End: Complemental strand, 29652264 - 29652210
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatag 346  Q
    ||||||||||||| ||||||||| |||| |||| |||||||||||| | ||||||    
T  29652264 accttgcatatattatgcattgttcttatcaactgagctaaactcatgaggatag 29652210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 30427777 - 30427731
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  30427777 accttgcatatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 9656012 - 9656057
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||| | ||||||||||||||||||| ||||||| ||||    
T  9656012 accttgcatattttatgcattgtccttaccaactgagctaagctca 9656057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 10320542 - 10320489
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||| ||||||| ||||||| | |||| |||| ||||||||||||||||||||    
T  10320542 accttacatatattatgcattattcttatcaactgagctaaactcacggggata 10320489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 11603851 - 11603892
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||||||||||| ||||||||||||||| ||| |||||||    
T  11603851 aaccttgcatatattatgcattgtccttactaacagagctaa 11603892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 13575333 - 13575288
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||| | ||||||||||| ||||||| ||||||||||||||    
T  13575333 cttgcatatgttatgcattgtccctaccaactgagctaaactcacg 13575288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 15438499 - 15438454
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||||||||||  ||||||| ||||    
T  15438499 accttgcatatattatgcattgtccttaccaagtgagctaagctca 15438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 15529803 - 15529758
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||||||||||  ||||||| ||||    
T  15529803 accttgcatatattatgcattgtccttaccaagtgagctaagctca 15529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 19488346 - 19488297
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    |||||| |||||| ||||||||||||||||||| ||||||  ||||||||    
T  19488346 accttgtatatattatgcattgtccttaccaactgagctatgctcacggg 19488297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 23816834 - 23816789
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  23816834 cttgcatatattatgcattatccttaccaactgagctaagctcacg 23816789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 31888072 - 31888023
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| || |||||||||||||||| |||||||  |||||||    
T  31888072 accttgcatatattatccattgtccttaccaactgagctaagttcacggg 31888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 32555302 - 32555253
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| | ||||||||||| |||||||  |||||||||||||    
T  32555302 gaaccttgcatattttatgcattgtccataccaactaagctaaactcacg 32555253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 444459 - 444419
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||  |||||||    
T  444459 accttgcatatattatgcattgtccttaccaattgagctaa 444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 1244720 - 1244760
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||| |||||| ||||||||||||||||||| |||||||    
T  1244720 accttgtatatattatgcattgtccttaccaactgagctaa 1244760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 4830058 - 4830022
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  4830058 ccgaaccttgcatatattatgcattgtccataccaac 4830022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 7869655 - 7869699
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    |||||||||||||| |||||||||||| |||||| ||| ||||||    
T  7869655 aaccttgcatatattatgcattgtcctcaccaactgagttaaact 7869699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 8442502 - 8442534
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||| |||||||||||||||||||    
T  8442502 accttgcatatattatgcattgtccttaccaac 8442534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 8910002 - 8910042
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||| ||||||||||||||||||| ||||||| |||||    
T  8910002 catatattatgcattgtccttaccaactgagctaagctcac 8910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 12208754 - 12208710
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||| || |||||||||||||||||||||||| |||| |||||    
T  12208754 atatattatacattgtccttaccaaccgagctaagctcatgggga 12208710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 12453182 - 12453138
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||| || |||||||||||||||||||||||| |||| |||||    
T  12453182 atatattatacattgtccttaccaaccgagctaagctcatgggga 12453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 15299662 - 15299614
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| |||||||||||| ||||||  ||||||| |||||||||    
T  15299662 ttgcatatattatgcattgtcctcaccaactaagctaaattcacgggga 15299614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 15480031 - 15479983
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| |||||||||||| ||||||  ||||||| |||||||||    
T  15480031 ttgcatatattatgcattgtcctcaccaactaagctaaattcacgggga 15479983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 22847471 - 22847519
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| | ||||| ||||||||||| ||||||| ||||||    
T  22847471 aaccttgcatatattacgcattttccttaccaactgagctaagctcacg 22847519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 27718904 - 27718956
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| ||||||||||| || |||| ||||||| ||||||    
T  27718904 tccggaccttgcatatattatgcattgtccatatcaactgagctaagctcacg 27718956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 28271988 - 28271948
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||| ||||||||||| ||||||||||||||| |||||    
T  28271988 catatattatgcattgtccctaccaaccgagctaacctcac 28271948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 32192944 - 32192908
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  32192944 ccgaaccttgcatatattatgcattgtccataccaac 32192908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 33620949 - 33620897
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| |||||| ||||||||||| ||| ||| ||| ||||||||||    
T  33620949 tccgaaccttgtatatattatgcattgtccatactaactgagttaaactcacg 33620897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 37141407 - 37141371
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  37141407 ccgaaccttgcatatattatgcattgtccataccaac 37141371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 37938538 - 37938494
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||||||| ||| ||||||| ||||||||||||||    
T  37938538 ttgcatatattatgcattatccataccaactgagctaaactcacg 37938494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 42982934 - 42982886
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||| |||||| ||| ||||||||||||||||||| ||| ||||    
T  42982934 cgaaccttgtatatattatgtattgtccttaccaaccgagttaagctca 42982886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 43962039 - 43962079
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||| ||||||||||||||| |||||||    
T  43962039 accttgcatatattatgtattgtccttaccaactgagctaa 43962079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 10771 - 10823
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  10771 aaccttgcatattttatgcattgtccttaccaactgagctaaactcacgggga 10823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 14441466 - 14441521
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  14441466 ccgaaccttgcatacattatgcattgtccttaccaactgagctaacctcacgggga 14441521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 788917 - 788856
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatagct 348  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| |||||| ||| ||||    
T  788917 tccgaaccttgcatatattatgcattgtccttaccaactgagataagctcacgaggacagct 788856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 32193874 - 32193921
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  32193874 accttgcatatattatgcattgttcttaccaactgagctaaactcacg 32193921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 2105954 - 2105904
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||| ||||||| |||||||||  |||||||||||||||||||||||    
T  2105954 cgaaccttacatatattatgcattgtttttaccaaccgagctaaactcacg 2105904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 18256940 - 18256882
Alignment:
Q  281 tttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||| ||||||||||||| |||||||||||||| |||| ||||||| ||||||    
T  18256940 tttgaacccggaccttgcatatattatgcattgtccttatcaactgagctaagctcacg 18256882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Complemental strand, 32053837 - 32053787
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  32053837 cgaaccttgcatatattatgcattgtccataccaactgagctaagctcacg 32053787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 14679172 - 14679135
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgag 328  Q
    |||||||||||||| |||||||||||||||||||||||    
T  14679172 aaccttgcatatattatgcattgtccttaccaaccgag 14679135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 26587440 - 26587387
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||||||| ||||||||    
T  26587440 gaaccttgcatatattatgcattgttcttactaactgagctaaacccacgggga 26587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 323
Target Start/End: Complemental strand, 4467324 - 4467293
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaa 323  Q
    ||||||||||||||||||||||||||||||||    
T  4467324 accttgcatatatcatgcattgtccttaccaa 4467293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 8569755 - 8569704
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||| ||||||  ||| ||||||||||||||    
T  8569755 accttgcatatattatgcattgtccataccaattgagttaaactcacgggga 8569704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 9333777 - 9333730
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  9333777 accttgcatatataatgcattgtccttaccaattgagctaagctcacg 9333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 9923299 - 9923240
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||| |||||||| |||||| |||||||||||||| |||  |||||||||||||    
T  9923299 gtttgaatcccgaaccttgtatatattatgcattgtccttatcaattgagctaaactcac 9923240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 18254116 - 18254167
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||| ||| ||||||||||||||||||| ||||||| ||||| ||||    
T  18254116 accttgcatgtattatgcattgtccttaccaactgagctaagctcacaggga 18254167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 20568310 - 20568357
Alignment:
Q  296 tgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  20568310 tgcatatattatgcaatgtccttaccaactgagctaagctcacgggga 20568357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 20744184 - 20744137
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  20744184 accttgcatatattatgcattgtccataccaactgagctaagctcacg 20744137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 21936043 - 21936094
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||| ||||||||||||| ||| ||||| ||||||||| |||||||||||||    
T  21936043 tccggaccttgcatatattatgaattgttcttaccaactgagctaaactcac 21936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 26320566 - 26320625
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| ||| ||||||||||| | ||||||||||| ||||||| ||||||| ||||||    
T  26320566 gtttgaacccggaccttgcatattttatgcattgtccataccaactgagctaagctcacg 26320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 30960068 - 30960119
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||||| ||||    
T  30960068 accttgcatatattaagcattgtccttaccaactgagctaagctcaccggga 30960119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 33938690 - 33938741
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||| | ||||||| ||||||| ||||||    
T  33938690 ccgaaccttgcatatattatgcattgttcataccaactgagctaagctcacg 33938741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 339
Target Start/End: Original strand, 10780123 - 10780169
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  10780123 ccttgcatatattatgcattgtccctaccaactgagctaagctcacg 10780169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 15169981 - 15169931
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||| ||||||| ||||||||| ||||||| | |||||||||||||    
T  15169981 ccgaaccttacatatattatgcattgtacttaccagctgagctaaactcac 15169931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 15178753 - 15178703
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||| ||||||| ||||||||| ||||||| | |||||||||||||    
T  15178753 ccgaaccttacatatattatgcattgtacttaccagctgagctaaactcac 15178703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 17829326 - 17829372
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    |||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  17829326 ttgcatatattatgcatagtccttaccaactgagctaagctcacggg 17829372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 22576206 - 22576160
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||| ||||||| || |||||||||||||||| |||||||||||||    
T  22576206 accttacatatattattcattgtccttaccaactgagctaaactcac 22576160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 24623328 - 24623378
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||| ||||||| ||||||||||| || |||| |||||||||||||    
T  24623328 ccgaaccttacatatattatgcattgtccatatcaactgagctaaactcac 24623378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 866298 - 866347
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| |||||| || | ||||||| ||||||||||||||    
T  866298 gaaccttgcatatattatgcatcgtgcctaccaactgagctaaactcacg 866347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 7083009 - 7083054
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  7083009 cttgcatatattatgcattgtccttaccaattgagctaagctcacg 7083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 28757036 - 28757085
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||||| || |||||||||||||||| ||| ||| |||||    
T  28757036 cgaaccttgcatatattatacattgtccttaccaactgagttaagctcac 28757085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 30639441 - 30639490
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| ||||||| | | ||||||| ||||||||||||||||    
T  30639441 accttgcatatattatgcattattcctaccaactgagctaaactcacggg 30639490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 3808120 - 3808184
Alignment:
Q  280 gtttgaatc-cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||| || ||||||||||||| ||||||||||||||| ||| ||| |||  |||||||||    
T  3808120 gtttgaatctcggaccttgcatatattatgcattgtccttactaactgagttaagttcacgggga 3808184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 4450308 - 4450260
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||| |||||||||| ||| |||| ||||||| |||||||    
T  4450308 accttgcatatattatgcattgtctttatcaactgagctaagctcacgg 4450260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 17382129 - 17382077
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    |||||||||||| || |||||||| ||||||| ||||||| |||||| |||||    
T  17382129 ccttgcatatattatacattgtccataccaactgagctaagctcacgaggata 17382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 26522516 - 26522472
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||| |||||| ||||||||||||||||||| ||||||| |||||    
T  26522516 cttgtatatattatgcattgtccttaccaactgagctaagctcac 26522472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 28318081 - 28318041
Alignment:
Q  284 gaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||| ||||||||||||| ||||||||||| |||||||    
T  28318081 gaatccggaccttgcatatattatgcattgtccataccaac 28318041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 30374546 - 30374594
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| || |||||||||||||||  ||| ||||||||||    
T  30374546 aaccttgcatatattatacattgtccttaccaattgaggtaaactcacg 30374594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 31971575 - 31971543
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||| |||||||||||||||||||    
T  31971575 accttgcatatattatgcattgtccttaccaac 31971543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 32149184 - 32149144
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||| ||||||||| |||||||    
T  32149184 accttgcatatattatgcattgttcttaccaactgagctaa 32149144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 33824927 - 33824887
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| |||||||||||||| |||| |||||||    
T  33824927 accttgcatatattatgcattgtccttatcaactgagctaa 33824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 34206277 - 34206222
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||||| |||||||||| |||||||| ||| ||||||||||||||    
T  34206277 ccgaaccttgcatatattatgcattgtctttaccaactgagttaaactcacgggga 34206222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 21316940 - 21316879
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||| ||| ||||| ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  21316940 gtttgaacccggacctttcatatattatgcattgtccttaccaactgagttaaactcacggg 21316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 36321508 - 36321556
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  36321508 aaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 36321556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 16133080 - 16133127
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  16133080 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 16133127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 22522816 - 22522863
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  22522816 accttgcatatattatgcattgtccataccaaccgagctaagctcacg 22522863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 27679548 - 27679493
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||||| ||||||| || |||||||| ||||||| ||||||||||    
T  27679548 ccgaaccttgcatatattatgcattatctttaccaactgagctaagctcacgggga 27679493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 346
Target Start/End: Original strand, 18278274 - 18278328
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggatag 346  Q
    ||||||||||||| ||||||||| ||||||||| ||| |||||||||||| ||||    
T  18278274 accttgcatatattatgcattgttcttaccaactgagttaaactcacgggaatag 18278328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 11017222 - 11017169
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||| ||| ||||||| |||||||||||||| |||||    
T  11017222 accttgcatatattatgcattatccctaccaactgagctaaactcacgcggata 11017169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 11844452 - 11844493
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  11844452 aaccttgcatatattatgcattgtccttaccaactgagctaa 11844493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 17862027 - 17861978
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| |||||||||| ||||||||||| ||||||| ||||||||||||||    
T  17862027 gaactttgcatatattatgcattgtccctaccaactgagctaaactcacg 17861978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 5015331 - 5015280
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||||| || |||||||| ||||||| ||||||||||||||    
T  5015331 tccgaaccttgcatatattattcattgtcc-taccaactgagctaaactcacg 5015280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 21636327 - 21636363
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtcc 316  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21636327 gtttgaatcccaaccttgcatatatcatgcattgtcc 21636363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 21644574 - 21644610
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtcc 316  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21644574 gtttgaatcccaaccttgcatatatcatgcattgtcc 21644610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 27545173 - 27545217
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||    
T  27545173 ccttgcatatattatgcattgtccctaccaaccgacctaaactca 27545217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 42168960 - 42169008
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||  ||||||||||||||||||| ||| |||||||||||    
T  42168960 accttgcatatactatgcattgtccttaccaactgagataaactcacgg 42169008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 3445262 - 3445309
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| || ||||||||||||||||||| ||||||| ||||||    
T  3445262 accttgcatacattatgcattgtccttaccaactgagctaagctcacg 3445309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 6489053 - 6489006
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  6489053 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 6489006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 13220623 - 13220682
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| |||||| |||| ||||| |||||| |||||||||||| ||||||| ||||||    
T  13220623 gtttgaacccgaactttgcgtatattatgcatcgtccttaccaactgagctaagctcacg 13220682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 13409476 - 13409429
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||||| |||||||||| |||| ||| ||||||||||||    
T  13409476 gaaccttgcatatattatgcattgtctttactaactgagctaaactca 13409429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 15889457 - 15889410
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  15889457 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 15889410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Complemental strand, 21309009 - 21308966
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  21309009 catatattatgcattgtccttaccaactgagttaaactcacggg 21308966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 24485749 - 24485698
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||| ||||||    
T  24485749 ccgaaccttgcatatattatgcattgtccataccaactaagctaagctcacg 24485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 343
Target Start/End: Original strand, 25796419 - 25796474
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||| ||||| ||||    
T  25796419 ccgaaccttgcatacattatggattgtccttaccaactgagctaagctcacaggga 25796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 27903163 - 27903112
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||| | ||||||| || |||||||||||    
T  27903163 ccgaaccttgcatatattatgcattgttcataccaactgaactaaactcacg 27903112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 37932376 - 37932329
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  37932376 accttgcatatattatgcattgtccataccaactgagctaagctcacg 37932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 40446029 - 40445982
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||||||    
T  40446029 accttgcatatattatgcattgtccttatcaactgagttaaactcacg 40445982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 43108617 - 43108570
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||| ||||    
T  43108617 gaaccttgcatatattatgcattgtccttaccaactgagttaagctca 43108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 11647244 - 11647190
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    |||||||||||||| ||||||||||||||||||| ||| |||  |||||| ||||    
T  11647244 aaccttgcatatattatgcattgtccttaccaactgagttaagttcacggcgata 11647190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 18489091 - 18489137
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||    
T  18489091 accttgcatatattatgcattgtctataccaactgagctaaactcac 18489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 22498988 - 22498942
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  22498988 accttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 339
Target Start/End: Complemental strand, 34436896 - 34436850
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  34436896 ccttgcatatattatgcattgtccctaccaactgagctaagctcacg 34436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 332
Target Start/End: Complemental strand, 5846072 - 5846035
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  5846072 ttgcatatattatgcattgtccttaccaactgagctaa 5846035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 344
Target Start/End: Original strand, 16701583 - 16701648
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    |||||||||| | ||||||||||||| || |||||||| ||||||| ||||||| |||||| ||||    
T  16701583 gtttgaatcccggaccttgcatatattattcattgtccctaccaactgagctaagctcacgaggat 16701648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 16752513 - 16752562
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||| ||||||||||| ||||||||||||||||||| || |||| ||||    
T  16752513 ccgaatcttgcatatattatgcattgtccttaccaactgaactaagctca 16752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 17261831 - 17261790
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||    
T  17261831 catatattatgtattgtccataccaaccgagctaaactcacg 17261790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 18147760 - 18147719
Alignment:
Q  296 tgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||| |||||||||||||| |||| ||||||||||||    
T  18147760 tgcatatattatgcattgtccttatcaactgagctaaactca 18147719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 18391646 - 18391601
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||| | ||||||||||||||||||| ||||||| ||||    
T  18391646 accttgcatattttatgcattgtccttaccaactgagctaagctca 18391601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 19068442 - 19068499
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||| || |||||||||||||| ||||||| ||| ||||||| ||||||| ||||    
T  19068442 gtttgaaccccaaccttgcatatattatgcattatccataccaactgagctaagctca 19068499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Complemental strand, 20125084 - 20125047
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtcct 317  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  20125084 gtttgaacccgaaccttgcatatattatgcattgtcct 20125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 28604433 - 28604482
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||| ||| ||| |||||||||| |||||||| ||||||||||||||||    
T  28604433 accttacatttattatgcattgtctttaccaactgagctaaactcacggg 28604482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 29554912 - 29554867
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtcc-ttaccaaccgagctaa 332  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  29554912 ccgaaccttgcatgtattatgcattgtcctttaccaaccgagctaa 29554867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 31602827 - 31602880
Alignment:
Q  280 gtttgaatc-cgaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||    
T  31602827 gtttgaatctcgaaccttgcatatattatgcattgttcataccaactgagctaa 31602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 34702536 - 34702487
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||| ||||||| ||||||||||||||||||| ||| ||| ||||||||    
T  34702536 acctttcatatattatgcattgtccttaccaactgagttaagctcacggg 34702487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 37054280 - 37054329
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||  |||||| ||||||||||| ||||||| ||||||||||||    
T  37054280 ccgaaccttatatatattatgcattgtccctaccaactgagctaaactca 37054329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 41650940 - 41651001
Alignment:
Q  278 gtgtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||  || ||||||||||||| ||||||||||| ||||||| ||| ||| ||||||    
T  41650940 gtgtttgaactcggaccttgcatatattatgcattgtccataccaactgagttaagctcacg 41651001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 5485229 - 5485185
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  5485229 ttgcatatattatgcattgtccctaccaactgagctaagctcacg 5485185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 8544999 - 8545051
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| ||||||||||||| |||||||||||||| |||| ||| ||| ||||||    
T  8544999 tccggaccttgcatatattatgcattgtccttatcaactgagttaagctcacg 8545051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 16531290 - 16531322
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||| |||||||||||||||||||    
T  16531290 accttgcatatattatgcattgtccttaccaac 16531322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 25604011 - 25604063
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||||||| ||||| ||||| || |||| ||||||| |||||||    
T  25604011 ccgaaccttgcatatattatgcactgtccatatcaactgagctaagctcacgg 25604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 26377009 - 26376961
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||  ||||||||||||||||||| |||||||  |||||||||    
T  26377009 ttgcatataatatgcattgtccttaccaactgagctaagttcacgggga 26376961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 26409299 - 26409251
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||| ||||||| ||||||||||| ||||||| ||||||| |||||||    
T  26409299 accttacatatattatgcattgtccataccaactgagctaagctcacgg 26409251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 38353820 - 38353772
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||| |||| |||||||||||||| || |||| |||||||    
T  38353820 accttgcatatattatgcgttgtccttaccaactgaactaagctcacgg 38353772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 42505918 - 42505878
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  42505918 accttgcatatattatgcattgtccataccaactgagctaa 42505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 3755385 - 3755338
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  3755385 accttgcatatattatgcattgtccctaccaaccgagctaaactcacg 3755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 39779074 - 39779023
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||||    
T  39779074 ccgaaccttgcatatattatgcattgtccataccaaccgagctatactcacg 39779023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 54230113 - 54230159
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  54230113 aaccttgcatatattatgcattgtccttaccaactgagctaaactca 54230159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 16980367 - 16980416
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  16980367 gaaccttgcatatattatgcattgtccttaccaactgagctaagctcacg 16980416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 52119426 - 52119377
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  52119426 ccgaaccttgcatatattatgcattgtccttaccaactgagctaagctca 52119377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 10926519 - 10926475
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  10926519 ccgaaccttgcatatattatgcattgtccttaccaactgagctaa 10926475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 1149084 - 1149131
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  1149084 accttgcatatattatgcattgtccttaccaactgagctaagctcacg 1149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 43777059 - 43777118
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| ||||||||||||||||| |||||| |||| ||||||| ||||||| ||||||    
T  43777059 gtttgaacccgaaccttgcatatattatgcatggtccctaccaactgagctaagctcacg 43777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 53208016 - 53207965
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| |||||||| |||||||||| ||||||| ||||||||||    
T  53208016 accttgcatatattatgcattgcccttaccaactgagctaagctcacgggga 53207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 2662141 - 2662095
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  2662141 cgaaccttgcatatattatgcattgtctttaccaactgagctaaact 2662095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 8113579 - 8113625
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  8113579 cttgcatatattatgcattgtccttaccaactgagctaagctcacgg 8113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 29631245 - 29631187
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||| ||||    
T  29631245 gtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaagctca 29631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 17588406 - 17588357
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| ||||||||||||||||||| ||| ||| ||||||||||    
T  17588406 cttgcatatattatgcattgtccttaccaactgagttaagctcacgggga 17588357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 46469323 - 46469274
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    |||||| |||||| ||||||||||||||||||| ||||||| ||||||||    
T  46469323 accttgaatatattatgcattgtccttaccaactgagctaagctcacggg 46469274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 5702192 - 5702243
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| ||||||||| ||||||||| ||||||| ||||||||||    
T  5702192 aaccttgcatatattatgcattgt-cttaccaactgagctaagctcacgggga 5702243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 35191832 - 35191872
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  35191832 accttgcatatattatgcattgtccttaccaactgagctaa 35191872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 47099046 - 47099102
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||||||||| ||||||| | |||| |||| ||||||| |||||||||||    
T  47099046 ccgaaccttgcatatattatgcattattcttatcaactgagctaagctcacggggat 47099102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 52904161 - 52904205
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||    
T  52904161 ttgcatatattatgcattgtccttaccaactgagctaacctcacg 52904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 5349574 - 5349527
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||  ||| ||||||||||    
T  5349574 accttgcatatataatgcattgtccttaccaagtgagttaaactcacg 5349527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 10498710 - 10498757
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  10498710 accttgcatatattatgcattgtccataccaactgagctaagctcacg 10498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11508502 - 11508545
Alignment:
Q  296 tgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||| || |||||||||||| ||||||    
T  11508502 tgcatatatcatgcattgtccatatcaaccgagctaagctcacg 11508545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 18870740 - 18870787
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  18870740 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 18870787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 21331428 - 21331479
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||||| || |||| ||||||| ||||||    
T  21331428 ccgaaccttgcatatattatgcattgtccataacaactgagctaagctcacg 21331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 21513334 - 21513283
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| || ||||||||||||||||||| ||||||| ||||| ||||    
T  21513334 accttgcataaattatgcattgtccttaccaactgagctaagctcacaggga 21513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 21914086 - 21914137
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| |||| |||||    
T  21914086 accttgcatatattatgcattgtccttaccaactgagttaagctcatgggga 21914137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 338
Target Start/End: Complemental strand, 30200873 - 30200826
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||| |||||||||||||| |||| ||||||| |||||    
T  30200873 aaccttgcatatattatgcattgtccttagcaactgagctaagctcac 30200826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 324
Target Start/End: Complemental strand, 41259020 - 41258985
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||||| |||||||||||||||||||    
T  41259020 cgaaccttgcatatattatgcattgtccttaccaac 41258985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 48315039 - 48315086
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  48315039 accttgcatatattatgcattatccttaccaactgagctaagctcacg 48315086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 50037361 - 50037310
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||| ||||||    
T  50037361 ccgaaccttgcatacattatgcattgtccataccaactgagctaagctcacg 50037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 4402155 - 4402105
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||| ||||||||||| || |||||||||||||||| ||||||| |||||    
T  4402155 ccgaatcttgcatatattatccattgtccttaccaactgagctaagctcac 4402105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 13800713 - 13800667
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  13800713 accttgcatatattatgcattgttcttaccaactgagctaagctcac 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 343
Target Start/End: Complemental strand, 28093399 - 28093349
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||| ||||||||||| ||||||| ||  ||||||||||||||    
T  28093399 ccttgcatatattatgcattgtccataccaactgaattaaactcacgggga 28093349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 42269356 - 42269298
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||  |||||||| ||||||| ||||||||||| ||| ||| |||||||||||||    
T  42269356 gtttgaactcgaaccttacatatattatgcattgtccatactaactgagctaaactcac 42269298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 47377361 - 47377411
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||| |||||| ||||||||||||||||||| ||| ||| ||||||    
T  47377361 cgaaccttgtatatattatgcattgtccttaccaactgagttaagctcacg 47377411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 53996345 - 53996299
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  53996345 accttgcatatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 55126055 - 55126001
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||||| ||| |||||||| | |||| ||||||| ||||||||||    
T  55126055 cgaaccttgcatatattatgtattgtcctcatcaactgagctaagctcacgggga 55126001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 977951 - 977996
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||| ||||||||||||| ||||||||||| ||||||| |||||||    
T  977951 tccggaccttgcatatattatgcattgtccataccaactgagctaa 977996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 4564664 - 4564623
Alignment:
Q  283 tgaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||| ||||||||||||| ||||||||||| |||||||    
T  4564664 tgaatccggaccttgcatatattatgcattgtccctaccaac 4564623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 324
Target Start/End: Complemental strand, 10594724 - 10594691
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||| |||||||||||||||||||    
T  10594724 aaccttgcatatattatgcattgtccttaccaac 10594691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 12043108 - 12043165
Alignment:
Q  289 cgaaccttgcatatatca-tgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||| |||||| |||||    
T  12043108 cgaaccttgcatatattaatgcattgtccttaccaactgagttaagctcacgaggata 12043165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 12976617 - 12976670
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||||||| || |||| ||| ||||||||||| ||||    
T  12976617 accttgcatatattatgcattgtccctatcaactgagttaaactcacggagata 12976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 13992715 - 13992666
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||| |||||| ||||||||||||||||||| ||||||| | ||||||||    
T  13992715 cttgtatatattatgcattgtccttaccaactgagctaagcacacgggga 13992666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 324
Target Start/End: Complemental strand, 14741841 - 14741808
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||| |||||||||||||||||||    
T  14741841 aaccttgcatatattatgcattgtccttaccaac 14741808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 28266762 - 28266717
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||||||||||| || |||| ||||    
T  28266762 accttgcatatattatgcattgtccttaccaactgaactaacctca 28266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 339
Target Start/End: Complemental strand, 33223928 - 33223867
Alignment:
Q  278 gtgtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||  |||||||||||||||| |||||||||   ||||||| ||||||| ||||||    
T  33223928 gtgtttgaactcgaaccttgcatatattatgcattgtttctaccaactgagctaagctcacg 33223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 39869822 - 39869867
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||||| |||||| ||||||||||||||||||| ||| ||||||||    
T  39869822 accttgtatatattatgcattgtccttaccaactgagttaaactca 39869867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Complemental strand, 45254278 - 45254237
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    |||||| ||||||| ||||||||||||||||||| |||||||    
T  45254278 aaccttacatatattatgcattgtccttaccaactgagctaa 45254237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 51882217 - 51882266
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| ||||||||||| ||||||| ||| ||| ||||||||||    
T  51882217 cttgcatatattatgcattgtccataccaactgagttaagctcacgggga 51882266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 53681894 - 53681943
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| ||||||||| ||||||||| ||| ||| ||||||||||    
T  53681894 cttgcatatattatgcattgttcttaccaactgaggtaagctcacgggga 53681943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 55198914 - 55198877
Alignment:
Q  306 atgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  55198914 atgcattgtccttaccaactgagctaaactcacaggga 55198877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 4216414 - 4216454
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| |||||||||||||| |||| |||||||    
T  4216414 accttgcatatattatgcattgtccttatcaactgagctaa 4216454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 8127510 - 8127462
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| | ||||||||||||||||||| ||| ||| ||||||    
T  8127510 aaccttgcatattttatgcattgtccttaccaactgagttaagctcacg 8127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 22486727 - 22486679
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggg 342  Q
    ||||||||||| ||||||||| ||||||||| ||| ||| |||||||||    
T  22486727 cttgcatatattatgcattgttcttaccaactgagttaagctcacgggg 22486679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 25441515 - 25441555
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  25441515 accttgcatatattatgcattgtccataccaactgagctaa 25441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 26973412 - 26973376
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaa 323  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  26973412 tccgaaccttacatatattatgcattgtccttaccaa 26973376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 35392050 - 35392002
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||||||| ||| |||||| |||||||| ||||||||||||||    
T  35392050 aaccttacatatattatgtattgtcattaccaactgagctaaactcacg 35392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 35863828 - 35863868
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||| ||||||||||||||| |||||||    
T  35863828 accttgcatatattatgtattgtccttaccaactgagctaa 35863868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 45096072 - 45096032
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| |||||||||||||| |||| |||||||    
T  45096072 accttgcatatattatgcattgtccttatcaactgagctaa 45096032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 45431994 - 45431954
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  45431994 accttgcatatattatgcattgtccctaccaactgagctaa 45431954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 47313382 - 47313434
Alignment:
Q  288 ccgaaccttgcatat-atcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||    
T  47313382 ccgaaccttgcatattattatgcattgtccataccaactgagctaagctcacg 47313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 24124842 - 24124893
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  24124842 cgaaccttgcatatattatgcattgtccttaacaactgagctaaactcacgg 24124893  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 38448881 - 38448932
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  38448881 accttgcatatattatgcattgtccttaccaactgagctaagctcacgggga 38448932  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 17283997 - 17283948
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  17283997 accttgcatatattatgcattgtccttaccaactgagctaagctcacggg 17283948  T

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Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 16533035 - 16533095
Alignment:
Q  280 gtttgaatccga-accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| | ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  16533035 gtttgaatcctagaccttgcatatattatgcattgttcctaccaaccgagctaaactcacg 16533095  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 30548094 - 30548138
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  30548094 gtttgaacccgaaccttgcatatattatgcattgtccttaccaac 30548138  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 31890759 - 31890811
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  31890759 tccggacctcgcatatattatgcattgtccttaccaactgagctaaactcacg 31890811  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 5907845 - 5907794
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  5907845 accttgcatatattatgcattgtccttgccaactgagctaagctcacgggga 5907794  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 6000158 - 6000209
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| |||||||||||| |||||| ||| ||||||||||||||    
T  6000158 accttgcatatattatgcattgtcctaaccaactgagttaaactcacgggga 6000209  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 19620622 - 19620571
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||    
T  19620622 accttgcatatattatgtattgtccttaccaactgagctaagctcacgggga 19620571  T

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Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 45140021 - 45140072
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  45140021 accttgcatatattatgcattgtccataccaactgagctaagctcacgggga 45140072  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 47528462 - 47528513
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||    
T  47528462 accttgcgtatattatgcattgtccttaccaactgagctaagctcacgggga 47528513  T

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Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 49183219 - 49183172
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  49183219 accttgcatatattatgtattgtccttaccaactgagctaaactcacg 49183172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 34521205 - 34521251
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  34521205 accttgcatatattatgcattgtccataccaactgagctaaactcac 34521251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 15803252 - 15803305
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||||||||| ||||| || |||| ||||||||||||    
T  15803252 accttgcatatattatgcattgtccttgccaactgaactaagctcacggggata 15803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 27023658 - 27023707
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagc 329  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||| ||||    
T  27023658 gtttgaacccgaaccttgcatatattatgcattgttcttaccaactgagc 27023707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 34733444 - 34733399
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  34733444 cttgcatatattatgcattgtccttaccaactgagctaagctcacg 34733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 34808575 - 34808624
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||||| |||||||||||||| |||| ||||||| |||||    
T  34808575 cgaaccttgcatatattatgcattgtccttaacaactgagctaagctcac 34808624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 8148379 - 8148431
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| ||| ||||| ||||||||| ||||||| ||||||||||    
T  8148379 aaccttgcatatattatgtattgttcttaccaactgagctaagctcacgggga 8148431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 8253787 - 8253739
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||||| ||||||||||| ||||||| ||||||| |||||    
T  8253787 gaaccttgcatatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 9639827 - 9639883
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||| ||||||||||||| ||||||||||||||||||  ||| ||| ||||||||||    
T  9639827 tccggaccttgcatatattatgcattgtccttaccaagtgagttaagctcacgggga 9639883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 35011441 - 35011393
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||||| |||||||||||||  |||||||||||| |||||    
T  35011441 gaaccttgcatatattatgcattgtccttgtcaaccgagctaagctcac 35011393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 40613069 - 40613029
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  40613069 accttgcatatattatgcattgtccttaccagccgagctaa 40613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 47719117 - 47719169
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||||| ||||||| ||||||||||| ||| ||| ||||||    
T  47719117 tccgaaccttgcatatattatgcattatccttaccaactgagttaagctcacg 47719169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 48681943 - 48681995
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||||||| ||||||||| | ||||||| ||||||| ||||||    
T  48681943 tccgaaccttgcatatattatgcattgttcataccaactgagctaagctcacg 48681995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 50638931 - 50638971
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  50638931 accttgcatatattatgcattgtccttaccaactgagctaa 50638971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 2817388 - 2817439
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| ||| |||||    
T  2817388 accttacatatattatgcattgtccttaccaactgagctaaattcatgggga 2817439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 3393578 - 3393629
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||||||| ||||||||| | || |||| |||||||||||||    
T  3393578 tccgaaccttgcatatattatgcattgttcatatcaactgagctaaactcac 3393629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 7574133 - 7574180
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  7574133 accttgcatatactatgcattgtccttaccaactgagttaaactcacg 7574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 9413848 - 9413797
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||| ||||||| ||||||||| ||||||||| || |||||||||||    
T  9413848 ccgaaccttacatatattatgcattgttcttaccaactgaactaaactcacg 9413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 10132459 - 10132510
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| || ||||  |||||||||    
T  10132459 accttgcatatattatgcattgtccttaccaactgatctaagttcacgggga 10132510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 17221535 - 17221586
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||| |||||||||  || ||||||||||||||    
T  17221535 accttgcatatattatgcattgttcttaccaacttagttaaactcacgggga 17221586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 20481582 - 20481621
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgag 328  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  20481582 cgaaccttgcatatattatacattgtccttaccaaccgag 20481621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 21400038 - 21400085
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  21400038 accttgcatatattatgcattgtccctaccaactgagctaagctcacg 21400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 21638159 - 21638112
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||| ||||||  ||||||| ||||||    
T  21638159 accttgcatatatcatgcattgtccgtaccaattgagctaagctcacg 21638112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 27533293 - 27533242
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||| ||||||||||| ||||||| || |||| ||||||    
T  27533293 ccgaaccttgcatatattatgcattgtccctaccaactgatctaagctcacg 27533242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 28032330 - 28032283
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| |||||||||  |||| ||||||||||||||||||    
T  28032330 accttgcatatattatgcattgtttttactaaccgagctaaactcacg 28032283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 41677611 - 41677658
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||| ||| ||||||||||||||| ||||||| ||||||||||||    
T  41677611 catatattatgtattgtccttaccaactgagctaagctcacggggata 41677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 42045387 - 42045434
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  42045387 accttgcatatattatgcattgtccataccaactgagctaagctcacg 42045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 324
Target Start/End: Complemental strand, 43843940 - 43843905
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||||| |||||||||||||||||||    
T  43843940 cgaaccttgcatatattatgcattgtccttaccaac 43843905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 49875614 - 49875661
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| ||||||    
T  49875614 accttgcatatattatgcattgtccttaccaactgagttaagctcacg 49875661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 10843331 - 10843389
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    |||| ||||||||||||| ||||||| |||||| |||| |||||||  |||||||||||    
T  10843331 tccggaccttgcatatattatgcattatccttatcaactgagctaagttcacggggata 10843389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 28039875 - 28039921
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| |||||    
T  28039875 accttgcatatattatgcattgtccttaccaactgagttaagctcac 28039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 34429860 - 34429826
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||||||||||||||||||| ||||||||    
T  34429860 gaaccttgcatatatcatgcattgtctttaccaac 34429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 41926868 - 41926822
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| |||||    
T  41926868 accttacatatattatgcattgtccttaccaactgagctaagctcac 41926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 339
Target Start/End: Complemental strand, 44641572 - 44641526
Alignment:
Q  293 ccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||||    
T  44641572 ccttgcatatattatgcattgtccatatcaactgagctaaactcacg 44641526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 17643319 - 17643380
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    |||| |||||| || ||| ||||||  |||||||||||||||||| ||| ||||||||||||    
T  17643319 gtttaaatccggactttgtatatattctgcattgtccttaccaactgaggtaaactcacggg 17643380  T

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Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 19396205 - 19396254
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    |||||||||||||| ||||||| ||| ||||||| ||| |||||||||||    
T  19396205 aaccttgcatatattatgcattatccctaccaactgagttaaactcacgg 19396254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 29987127 - 29987172
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||||||| ||||| ||| ||||||||    
T  29987127 accttgcatatattatgcattgtccttgccaactgagttaaactca 29987172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 30561769 - 30561724
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    ||||||||||||| ||||||||| |||||||||  |||||||||||    
T  30561769 accttgcatatattatgcattgttcttaccaacttagctaaactca 30561724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 35474000 - 35473951
Alignment:
Q  290 gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||| ||||||| ||||||||||  ||||||| ||||||    
T  35474000 gaaccttgcatatattatgcattatccttaccaattgagctaagctcacg 35473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 339
Target Start/End: Complemental strand, 40693718 - 40693685
Alignment:
Q  306 atgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||| ||||||||||||||    
T  40693718 atgcattgtccttaccaactgagctaaactcacg 40693685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 45190271 - 45190316
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||    
T  45190271 gtttgaatcccgaaccttgcatatattatgcattgtccataccaac 45190316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 46707916 - 46707867
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| ||||||||||||||||||| | ||||| || |||||||    
T  46707916 cttgcatatattatgcattgtccttaccaactgggctaagctaacgggga 46707867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 2613772 - 2613716
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||| ||||| | ||||||||||| ||||||| ||||||| |||||| ||||    
T  2613772 ccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgaggat 2613716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 3509956 - 3509996
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  3509956 accttgcatatattatgcattgtccataccaactgagctaa 3509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 6809817 - 6809865
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| ||||||||||||||| ||| |||||||  |||||||||    
T  6809817 ttgcatatattatgcattgtccttacaaactgagctaagttcacgggga 6809865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 8269383 - 8269423
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||| ||||||||||||||| |||||||    
T  8269383 accttgcatatattatgtattgtccttaccaactgagctaa 8269423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 9872119 - 9872159
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagcta 331  Q
    |||||||||||||| ||||||| ||||||||||| ||||||    
T  9872119 aaccttgcatatattatgcattatccttaccaactgagcta 9872159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 11014291 - 11014231
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||| ||||||||||| ||||| ||||  ||||||| ||||||||||||||    
T  11014291 gtttgaatcccgaatcttgcatatattatgcactgtctctaccaactgagctaaactcacg 11014231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 12500973 - 12500937
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    |||||| |||||||||| |||||||||||||||||||    
T  12500973 ccgaactttgcatatattatgcattgtccttaccaac 12500937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 14520987 - 14520939
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||| | ||||||||||| ||||||| ||||||| ||||||||||    
T  14520987 ttgcatattttatgcattgtccataccaactgagctaagctcacgggga 14520939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Complemental strand, 17396755 - 17396703
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||| |||||| |||||||||||||  |||| ||||||| ||||||||||    
T  17396755 aaccttgaatatattatgcattgtccttgtcaactgagctaagctcacgggga 17396703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 18056734 - 18056782
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| ||||||||||||||||||| ||| ||| || |||||||    
T  18056734 ttgcatatattatgcattgtccttaccaactgagttaagcttacgggga 18056782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 22821106 - 22821070
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  22821106 ccgaaccttgcatatattatgcattgttcttaccaac 22821070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 23228518 - 23228558
Alignment:
Q  300 tatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||| ||||||||||||||||||| ||||||| |||||||    
T  23228518 tatattatgcattgtccttaccaactgagctaagctcacgg 23228558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 24631883 - 24631839
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||    
T  24631883 cttgcatatattatgcattatccttaccaactgagttaaactcac 24631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 29739383 - 29739343
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||| | ||||||||||||||||||| |||||||    
T  29739383 accttgcatattttatgcattgtccttaccaactgagctaa 29739343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 30795747 - 30795707
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||| ||||||||| |||||||    
T  30795747 accttgcatatattatgcattgttcttaccaactgagctaa 30795707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 33577975 - 33577927
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||| ||||||| || ||||||||||| |||| |||||||||||||||    
T  33577975 accttacatatattatacattgtccttagcaactgagctaaactcacgg 33577927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 47417834 - 47417798
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaa 323  Q
    |||||||||||||||||| |||||||||||| |||||    
T  47417834 tccgaaccttgcatatattatgcattgtcctaaccaa 47417798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 50263433 - 50263381
Alignment:
Q  285 aatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactca 337  Q
    |||| ||||||||||||||| ||||||| || |||||||| ||||||| ||||    
T  50263433 aatctgaaccttgcatatattatgcattatcgttaccaactgagctaagctca 50263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 25435 - 25382
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||||    
T  25435 accttgcatatattatgcattgtccttaccaactgagttaagctcacggggata 25382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 3953499 - 3953434
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||||| |||||    
T  3953499 gtttgaacccgaaccttgcatatattatgcattgtccataccgactgagctaagctcacgaggata 3953434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 1399208 - 1399161
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1399208 accttgcatatatcatgcattgtccataccaactgagttaaactcacg 1399161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 2618725 - 2618674
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||||||||||||| |||| || ||||||||||    
T  2618725 accttgcatatattatgcattgtccttaccaactgagcgaagctcacgggga 2618674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 44558789 - 44558836
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  44558789 accttgcatatattatgcattgtccataccaactgagctaaactcacg 44558836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 3533023 - 3533069
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  3533023 accttgcatatattatgcattgtccttactaactgagctaaactcac 3533069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 4340171 - 4340125
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  4340171 cttgcatatattatgcattgtccttaccaactgagctaatctcacgg 4340125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 8615069 - 8615023
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  8615069 accttgcatatattatgcattgtccttaccaactgagctaagctcac 8615023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 21050237 - 21050283
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  21050237 accttgcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 46987132 - 46987086
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  46987132 accttgcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 8227389 - 8227344
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||    
T  8227389 catatattatgcattgtccttatcaactgagctaaactcacgggga 8227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 24991825 - 24991776
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||| ||||    
T  24991825 cttgcatatattatgcattgtccttaccaactgagctaagctcacaggga 24991776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 341
Target Start/End: Complemental strand, 41029318 - 41029269
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||||||||||| || |||||||||||||||| ||||||| ||||||||    
T  41029318 accttgcatatattatacattgtccttaccaactgagctaagctcacggg 41029269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 7872763 - 7872803
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  7872763 accttgcatatattatgcattgtccttaccaactgagctaa 7872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 13044156 - 13044204
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||| | ||||||||||||||||||| ||||||| ||||||    
T  13044156 aaccttgcatattttatgcattgtccttaccaactgagctaagctcacg 13044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 332
Target Start/End: Complemental strand, 18714494 - 18714454
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaa 332  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  18714494 accttgcatatattatgcattgtccttaccaactgagctaa 18714454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 27263392 - 27263336
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||||||| ||||||||||| ||||||| ||| |||  |||||||||    
T  27263392 tccgaaccttgcatatattatgcattgtccataccaactgagttaagttcacgggga 27263336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 27270286 - 27270230
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||||||| ||||||||||| ||||||| ||| |||  |||||||||    
T  27270286 tccgaaccttgcatatattatgcattgtccataccaactgagttaagttcacgggga 27270230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 30857295 - 30857247
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||||||    
T  30857295 aaccttgcatatattatgcattgtccataccaactaagctaaactcacg 30857247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 10244773 - 10244726
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  10244773 accttgcatatattatgcattgtccataccaactgagctaagctcacg 10244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 20521046 - 20521097
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||| || ||| ||||||||||||||| ||||||| ||||||||||    
T  20521046 accttgcatacattatggattgtccttaccaactgagctaagctcacgggga 20521097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Complemental strand, 27545003 - 27544952
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| || |||||||||||||||| ||| ||| ||||||||||    
T  27545003 accttgcatatattatacattgtccttaccaactgagataagctcacgggga 27544952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Complemental strand, 35222970 - 35222923
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||||||||||||||| || |||| || |||||||||||    
T  35222970 accttgcatatatcatgcattgtccctatcaactgacctaaactcacg 35222923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 37451252 - 37451303
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||| ||||||| ||||||| |||||| |||| ||||||||||||||||||    
T  37451252 accttacatatattatgcattatccttatcaactgagctaaactcacgggga 37451303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 39280833 - 39280884
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||||||| ||||||||| ||||||||| |||||||  |||||||||    
T  39280833 accttgcatatattatgcattgttcttaccaactgagctaagttcacgggga 39280884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 39926549 - 39926600
Alignment:
Q  288 ccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| |||||||||| |||||||||||||| |||| ||||||| ||||||    
T  39926549 ccgaacattgcatatattatgcattgtccttatcaactgagctaagctcacg 39926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 40762222 - 40762269
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||| | ||||||| ||||||    
T  40762222 accttgcatatattatgcattgtccttaccatctgagctaagctcacg 40762269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 19599191 - 19599145
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||| ||| |||||||||    
T  19599191 accttgcatatattatgcattgtccataccaactgagttaaactcac 19599145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 25888946 - 25888900
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  25888946 accttgcatatattatgcatcgtccttaccaactgagctaagctcac 25888900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 29461831 - 29461885
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacggg 341  Q
    ||||| || ||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  29461831 tccgacccctgcatatattatgcattgtccctaccaactgagttaaactcacggg 29461885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 30296379 - 30296333
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| || |||||||||||||||| ||||||| |||||    
T  30296379 accttgcatatattatacattgtccttaccaactgagctaagctcac 30296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 37864471 - 37864425
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  37864471 accttgcatatattatgcattgtacttaccaactgagctaagctcac 37864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Complemental strand, 40890254 - 40890216
Alignment:
Q  306 atgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  40890254 atgcattgtccttaccaactgagctacactcacggggat 40890216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 45272344 - 45272398
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||| |||||||||| ||||||||||| || | ||| ||||||||||||||    
T  45272344 cgaaccttacatatatcatacattgtccttatcagctgagttaaactcacgggga 45272398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 580943 - 580988
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||| | ||||||||||| ||||||||||||||| ||||||    
T  580943 cttgcatattttatgcattgtccataccaaccgagctaagctcacg 580988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 3584263 - 3584218
Alignment:
Q  280 gtttgaatc-cgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||    
T  3584263 gtttgaatctcgtaccttgcatatattatgcattgtccttaccaac 3584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 10236917 - 10236966
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| || ||||||||| ||||||||| ||| |||||||||    
T  10236917 cgaaccttgcatacattatgcattgttcttaccaactgagttaaactcac 10236966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 21105652 - 21105603
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    |||||||||||||||| ||||||| ||| ||||||| ||||||| |||||    
T  21105652 cgaaccttgcatatattatgcattttccataccaactgagctaagctcac 21105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 25246815 - 25246770
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| |||||||||| ||| |||| ||||||||||||||    
T  25246815 cttgcatatattatgcattgtctttatcaactgagctaaactcacg 25246770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 34885918 - 34885869
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||| ||||    
T  34885918 cttgcatatatcatgcattgtcttcaccaactgagctaagctcacaggga 34885869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 35666343 - 35666302
Alignment:
Q  298 catatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||    
T  35666343 catatattatgcattgtccttaccaaccgagttaagctcacg 35666302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 39801750 - 39801705
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  39801750 cttgcatatattatgcattgtccataccaactgagctaagctcacg 39801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 41527606 - 41527553
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||||||||||| ||||||||||| |||||||  |||||| |||||| |||||    
T  41527606 accttgcatatattatgcattgtccataccaactaagctaagctcacgaggata 41527553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 46551869 - 46551914
Alignment:
Q  300 tatatcatgcattgtccttaccaaccgagctaaactcacggggata 345  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||    
T  46551869 tatattatgcattgtccttatcaactgagttaaactcacggggata 46551914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 48527241 - 48527188
Alignment:
Q  287 tccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    |||| ||||||||||||| |||||||||||||| |||| ||| ||| |||||||    
T  48527241 tccggaccttgcatatattatgcattgtccttatcaactgagataagctcacgg 48527188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 1398419 - 1398459
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||||||||||||||||||| ||||||| ||||||    
T  1398419 atatattatgcattgtccttaccaactgagctaagctcacg 1398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 3196659 - 3196703
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| || ||||||| |||||||| |||||||||||||    
T  3196659 cttgcatatattatacattgtctttaccaactgagctaaactcac 3196703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 4346703 - 4346659
Alignment:
Q  296 tgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||| ||||||||||| ||||||| ||||||| |||||||    
T  4346703 tgcatatattatgcattgtccctaccaactgagctaatctcacgg 4346659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 4398370 - 4398326
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  4398370 cttgcatatattatgcattgttcttaccaactgagctaatctcac 4398326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 5458073 - 5458133
Alignment:
Q  280 gtttgaatccga-accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| | ||||||||||||| ||||||||| |||| |||| ||||||| ||||||    
T  5458073 gtttgaatcccagaccttgcatatattatgcattgttcttatcaactgagctaagctcacg 5458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 23863703 - 23863747
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||| |||||| |||| ||||| |||||||||||||||||||    
T  23863703 gtttgaacccgaactttgcgtatattatgcattgtccttaccaac 23863747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Complemental strand, 30574691 - 30574659
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaac 324  Q
    ||||| |||||||||||||||||||||||||||    
T  30574691 accttacatatatcatgcattgtccttaccaac 30574659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 32566055 - 32566107
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| || || |||| |||||||| ||||||| ||||||||||    
T  32566055 aaccttgcatatattatacactgtctttaccaactgagctaagctcacgggga 32566107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 37930103 - 37930043
Alignment:
Q  280 gtttgaatcc-gaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||| | ||||||||| ||||||||||||||||||| ||| ||| ||||||    
T  37930103 gtttgaatcccgaatcctgcatatattatgcattgtccttaccaactgagataagctcacg 37930043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 48007562 - 48007610
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||||| |||||||||| |||||||| ||| ||| |||||||    
T  48007562 accttgcatatattatgcattgtcattaccaactgagttaagctcacgg 48007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 2379 - 2331
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  2379 aaccttgcatatattatgcattgtccctaccaaccgagctaagctcacg 2331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 239850 - 239806
Alignment:
Q  295 ttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||    
T  239850 ttgcatatattatgcattgtccttaccaactgagctaaactcacg 239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 17790 - 17731
Alignment:
Q  280 gtttgaatccgaaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||| ||| ||||||||| ||| ||||||||||| ||||||| ||||||||||||||    
T  17790 gtttgaacccggaccttgcatgtattatgcattgtccataccaactgagctaaactcacg 17731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 53792 - 53843
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    ||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||    
T  53792 accttgcatgtattatgcactgtccttaccaactgagctaaactcacgggga 53843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 119966 - 120005
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgag 328  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  119966 cgaaccttgcatatattatgcattgtccttaccaaccgag 120005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 210090 - 210129
Alignment:
Q  289 cgaaccttgcatatatcatgcattgtccttaccaaccgag 328  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  210090 cgaaccttgcatatattatgcattgtccttaccaaccgag 210129  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 20015 - 20057
Alignment:
Q  280 gtttgaatccgaa-ccttgcatatatcatgcattgtccttacc 321  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  20015 gtttgaatccgaaaccttgcatatatcatgcattgtccttacc 20057  T

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Target: scaffold0118 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 40045 - 39997
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||||||| ||||||||||| ||||||| ||||||| ||||||    
T  40045 aaccttgcatatattatgcattgtccataccaactgagctaagctcacg 39997  T

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Target: scaffold0259 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 5459 - 5416
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaact 335  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||    
T  5459 accttgcatattttatgcattgtccataccaaccgagctaaact 5416  T

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Target: scaffold0259; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 19427 - 19387
Alignment:
Q  299 atatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||| ||||||||||||||||||| || |||||||||||    
T  19427 atatattatgcattgtccttaccaactgatctaaactcacg 19387  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 34903 - 34950
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    ||||||||||||| ||||||||||||||||||| ||| ||| ||||||    
T  34903 accttgcatatattatgcattgtccttaccaactgagttaagctcacg 34950  T

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Target: scaffold0126; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 34775 - 34827
Alignment:
Q  291 aaccttgcatatatcatgcattgtccttaccaaccgagctaaactcacgggga 343  Q
    |||||||||||||| ||  |||||| |||||||| || |||||||||||||||    
T  34775 aaccttgcatatattatatattgtctttaccaacagaactaaactcacgggga 34827  T

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Target: scaffold0334 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 5228 - 5182
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||| ||||||  |||||||||||||    
T  5228 accttgcatatattatgcattgtccataccaattgagctaaactcac 5182  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 31172 - 31214
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactc 336  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  31172 cttgcatatattatgcattgtccataccaactgagctaaactc 31214  T

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Target: scaffold0117 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 18337 - 18291
Alignment:
Q  294 cttgcatatatcatgcattgtccttaccaaccgagctaaactcacgg 340  Q
    ||||||||||| || |||||||||||||||| ||||||| |||||||    
T  18337 cttgcatatattatacattgtccttaccaactgagctaagctcacgg 18291  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 42349 - 42395
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagctaaactcac 338  Q
    ||||||||||||| ||||||||||||| ||||| ||||||| |||||    
T  42349 accttgcatatattatgcattgtccttcccaactgagctaagctcac 42395  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 76030 - 76068
Alignment:
Q  306 atgcattgtccttaccaaccgagctaaactcacggggat 344  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  76030 atgcattgtccttaccaactgagctacactcacggggat 76068  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 330
Target Start/End: Complemental strand, 75371 - 75333
Alignment:
Q  292 accttgcatatatcatgcattgtccttaccaaccgagct 330  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  75371 accttgcatatattatgcattgtccttaccaactgagct 75333  T

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Target: scaffold0567 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 7546 - 7586
Alignment:
Q  284 gaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||| ||||||||||||| ||||||||||| |||||||    
T  7546 gaatccggaccttgcatatattatgcattgtccataccaac 7586  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 28115 - 28175
Alignment:
Q  280 gtttgaatccga-accttgcatatatcatgcattgtccttaccaaccgagctaaactcacg 339  Q
    |||||||||| | ||||||||||  | ||||||||||| ||||||| ||||||||||||||    
T  28115 gtttgaatcccagaccttgcatacgttatgcattgtccataccaactgagctaaactcacg 28175  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 109187 - 109147
Alignment:
Q  284 gaatccgaaccttgcatatatcatgcattgtccttaccaac 324  Q
    ||||||| ||||||||||||| ||||||||||| |||||||    
T  109187 gaatccggaccttgcatatattatgcattgtccataccaac 109147  T

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