View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20985_low_34 (Length: 337)

Name: NF20985_low_34
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20985_low_34
NF20985_low_34
[»] chr7 (36 HSPs)
chr7 (3-232)||(24712212-24712441)
chr7 (231-297)||(24711936-24712002)
chr7 (288-337)||(5644669-5644718)
chr7 (296-337)||(6498783-6498824)
chr7 (289-337)||(29065812-29065860)
chr7 (293-337)||(31632719-31632763)
chr7 (293-337)||(43955514-43955558)
chr7 (294-337)||(40110735-40110778)
chr7 (288-334)||(14603283-14603329)
chr7 (296-334)||(23548632-23548670)
chr7 (297-334)||(9784952-9784989)
chr7 (296-337)||(26162155-26162196)
chr7 (296-337)||(34398967-34399008)
chr7 (293-337)||(2057392-2057436)
chr7 (293-337)||(35776973-35777017)
chr7 (294-334)||(39342663-39342703)
chr7 (294-337)||(29195707-29195750)
chr7 (298-337)||(43955632-43955671)
chr7 (296-334)||(28539189-28539227)
chr7 (296-334)||(35455804-35455842)
chr7 (291-337)||(40110856-40110902)
chr7 (289-331)||(40853980-40854022)
chr7 (296-337)||(29065937-29065978)
chr7 (294-331)||(31913234-31913271)
chr7 (292-336)||(40854089-40854133)
chr7 (294-337)||(29639233-29639276)
chr7 (292-327)||(30080811-30080846)
chr7 (294-337)||(30524253-30524296)
chr7 (296-331)||(32650591-32650626)
chr7 (297-331)||(30587909-30587943)
chr7 (300-334)||(30629061-30629095)
chr7 (296-337)||(2057513-2057554)
chr7 (296-337)||(5644795-5644836)
chr7 (296-337)||(18789264-18789305)
chr7 (290-334)||(23455268-23455312)
chr7 (296-336)||(34388384-34388424)
[»] chr8 (36 HSPs)
chr8 (282-337)||(36103087-36103142)
chr8 (288-337)||(40046796-40046845)
chr8 (296-337)||(28324704-28324745)
chr8 (296-337)||(33902667-33902708)
chr8 (290-337)||(17110987-17111034)
chr8 (293-331)||(30444963-30445001)
chr8 (296-337)||(515574-515615)
chr8 (296-337)||(3853616-3853657)
chr8 (296-337)||(3858074-3858115)
chr8 (299-336)||(35979047-35979084)
chr8 (294-331)||(42739947-42739984)
chr8 (296-337)||(44889354-44889395)
chr8 (293-337)||(17110866-17110910)
chr8 (296-331)||(7202934-7202969)
chr8 (292-331)||(14799975-14800014)
chr8 (294-337)||(14991690-14991733)
chr8 (294-337)||(27322691-27322734)
chr8 (292-331)||(33377345-33377384)
chr8 (294-337)||(42711398-42711441)
chr8 (296-334)||(29257396-29257434)
chr8 (292-337)||(14235-14279)
chr8 (294-331)||(7202863-7202900)
chr8 (296-337)||(24044960-24045001)
chr8 (290-331)||(29611382-29611423)
chr8 (300-337)||(30435250-30435287)
chr8 (294-334)||(1088322-1088362)
chr8 (293-337)||(32626076-32626120)
chr8 (296-331)||(8409947-8409982)
chr8 (294-337)||(23011732-23011775)
chr8 (296-331)||(34008799-34008834)
chr8 (300-334)||(44346723-44346757)
chr8 (296-337)||(14800078-14800119)
chr8 (294-331)||(36625255-36625292)
chr8 (289-337)||(4156285-4156333)
chr8 (298-330)||(29482856-29482888)
chr8 (293-337)||(33986001-33986045)
[»] chr3 (31 HSPs)
chr3 (290-337)||(44692940-44692987)
chr3 (291-337)||(42005984-42006030)
chr3 (292-337)||(44436254-44436299)
chr3 (292-337)||(49457339-49457384)
chr3 (292-337)||(27252012-27252057)
chr3 (293-334)||(34088568-34088609)
chr3 (292-337)||(35279933-35279978)
chr3 (296-337)||(46672834-46672875)
chr3 (296-337)||(47767432-47767473)
chr3 (294-331)||(54761583-54761620)
chr3 (288-331)||(332081-332124)
chr3 (294-337)||(9129462-9129505)
chr3 (294-337)||(9137569-9137612)
chr3 (296-334)||(36398023-36398061)
chr3 (296-334)||(48947605-48947643)
chr3 (304-337)||(19475824-19475857)
chr3 (296-337)||(37054394-37054435)
chr3 (296-337)||(44692822-44692863)
chr3 (293-337)||(46001361-46001405)
chr3 (293-337)||(53129874-53129918)
chr3 (294-337)||(7302344-7302387)
chr3 (296-331)||(46429414-46429449)
chr3 (295-337)||(5415782-5415824)
chr3 (297-331)||(38506895-38506929)
chr3 (293-334)||(671653-671694)
chr3 (296-337)||(5415901-5415942)
chr3 (300-337)||(21307563-21307600)
chr3 (298-331)||(27485474-27485507)
chr3 (294-331)||(37321622-37321659)
chr3 (296-337)||(39110394-39110435)
chr3 (294-331)||(55460356-55460393)
[»] chr6 (17 HSPs)
chr6 (293-337)||(28918162-28918206)
chr6 (290-337)||(34245012-34245059)
chr6 (290-337)||(6919825-6919872)
chr6 (290-337)||(29889466-29889513)
chr6 (296-337)||(9285647-9285688)
chr6 (296-336)||(1368477-1368517)
chr6 (296-336)||(33733432-33733472)
chr6 (298-337)||(6919710-6919749)
chr6 (294-337)||(9763130-9763173)
chr6 (296-337)||(776080-776121)
chr6 (288-337)||(8574687-8574736)
chr6 (292-337)||(8574783-8574828)
chr6 (293-329)||(1195348-1195384)
chr6 (293-331)||(8475176-8475214)
chr6 (296-334)||(13487275-13487313)
chr6 (300-337)||(15299543-15299579)
chr6 (293-337)||(776198-776242)
[»] chr5 (44 HSPs)
chr5 (285-337)||(5658765-5658817)
chr5 (292-337)||(40643935-40643980)
chr5 (293-337)||(25935319-25935363)
chr5 (294-337)||(15374078-15374121)
chr5 (298-337)||(19533936-19533975)
chr5 (294-336)||(2316376-2316418)
chr5 (292-334)||(41762247-41762289)
chr5 (290-331)||(2550322-2550363)
chr5 (294-331)||(15270871-15270908)
chr5 (296-337)||(22303899-22303940)
chr5 (292-337)||(32470878-32470923)
chr5 (290-334)||(15804316-15804360)
chr5 (290-334)||(34982210-34982254)
chr5 (293-337)||(40090443-40090487)
chr5 (298-337)||(2721589-2721628)
chr5 (298-337)||(28828369-28828408)
chr5 (296-331)||(34982313-34982348)
chr5 (290-337)||(37722923-37722970)
chr5 (293-331)||(22305109-22305147)
chr5 (293-334)||(927299-927340)
chr5 (296-337)||(9764456-9764497)
chr5 (300-337)||(9894351-9894388)
chr5 (296-337)||(15373960-15374001)
chr5 (296-337)||(22766952-22766993)
chr5 (296-337)||(26281298-26281339)
chr5 (292-337)||(33245401-33245446)
chr5 (297-337)||(3563278-3563318)
chr5 (293-337)||(9764335-9764379)
chr5 (288-337)||(13243449-13243500)
chr5 (296-336)||(20523133-20523173)
chr5 (297-337)||(20523251-20523291)
chr5 (289-337)||(23092080-23092128)
chr5 (298-337)||(15804412-15804451)
chr5 (294-337)||(32250127-32250169)
chr5 (296-331)||(33146061-33146096)
chr5 (296-331)||(33146191-33146226)
chr5 (298-337)||(37145530-37145569)
chr5 (296-326)||(34105089-34105119)
chr5 (291-337)||(40809336-40809382)
chr5 (296-337)||(2316497-2316537)
chr5 (290-331)||(22302533-22302574)
chr5 (298-331)||(40643838-40643871)
chr5 (293-337)||(6634012-6634056)
chr5 (293-337)||(16515136-16515180)
[»] chr4 (34 HSPs)
chr4 (293-336)||(36456045-36456088)
chr4 (295-337)||(31742882-31742924)
chr4 (296-337)||(14982280-14982321)
chr4 (294-337)||(41498608-41498651)
chr4 (292-337)||(1112601-1112646)
chr4 (292-337)||(7352930-7352975)
chr4 (296-337)||(31473849-31473890)
chr4 (296-337)||(49111430-49111471)
chr4 (297-337)||(4441338-4441378)
chr4 (301-337)||(28845876-28845912)
chr4 (298-337)||(7352814-7352853)
chr4 (298-337)||(42542985-42543024)
chr4 (299-337)||(10633035-10633073)
chr4 (296-337)||(857357-857398)
chr4 (304-337)||(1539649-1539682)
chr4 (296-337)||(15660301-15660342)
chr4 (296-337)||(16516171-16516212)
chr4 (294-331)||(21012596-21012633)
chr4 (296-337)||(36455907-36455948)
chr4 (290-337)||(10128092-10128139)
chr4 (296-331)||(26251015-26251050)
chr4 (296-334)||(2125857-2125895)
chr4 (291-337)||(4896643-4896689)
chr4 (294-336)||(42844541-42844583)
chr4 (296-337)||(467920-467960)
chr4 (296-337)||(11040968-11041008)
chr4 (296-337)||(11348355-11348396)
chr4 (294-331)||(14982385-14982422)
chr4 (296-337)||(28845989-28846030)
chr4 (298-331)||(42775625-42775658)
chr4 (294-331)||(54566188-54566225)
chr4 (293-337)||(4896750-4896794)
chr4 (293-337)||(15660180-15660224)
chr4 (296-336)||(55266894-55266934)
[»] chr1 (34 HSPs)
chr1 (294-337)||(15034657-15034700)
chr1 (294-337)||(26501111-26501154)
chr1 (288-337)||(8224760-8224809)
chr1 (294-337)||(23536065-23536108)
chr1 (294-337)||(27804383-27804426)
chr1 (290-337)||(43623010-43623057)
chr1 (291-337)||(27935603-27935649)
chr1 (295-337)||(32287965-32288007)
chr1 (296-337)||(15034777-15034818)
chr1 (296-337)||(24273252-24273293)
chr1 (296-337)||(30190254-30190295)
chr1 (291-331)||(45565500-45565540)
chr1 (294-337)||(4038073-4038116)
chr1 (293-336)||(5474414-5474457)
chr1 (292-331)||(15245456-15245495)
chr1 (286-337)||(47165244-47165295)
chr1 (291-337)||(34756422-34756468)
chr1 (299-337)||(51847855-51847893)
chr1 (296-337)||(6470718-6470759)
chr1 (300-336)||(27804269-27804305)
chr1 (291-331)||(41823180-41823220)
chr1 (92-132)||(44667583-44667623)
chr1 (293-337)||(49659214-49659257)
chr1 (296-331)||(32572940-32572975)
chr1 (298-337)||(50005197-50005236)
chr1 (291-337)||(28632617-28632663)
chr1 (291-337)||(29446745-29446791)
chr1 (299-337)||(45565397-45565435)
chr1 (293-331)||(50471765-50471803)
chr1 (296-337)||(4038193-4038234)
chr1 (294-331)||(40264046-40264083)
chr1 (296-337)||(44410311-44410352)
chr1 (293-337)||(38277412-38277456)
chr1 (281-337)||(50005064-50005120)
[»] chr2 (33 HSPs)
chr2 (296-337)||(14365817-14365858)
chr2 (293-337)||(10480116-10480160)
chr2 (294-337)||(14365698-14365741)
chr2 (295-337)||(14537198-14537240)
chr2 (293-334)||(3092279-3092320)
chr2 (294-331)||(11684696-11684733)
chr2 (296-337)||(11716408-11716449)
chr2 (293-334)||(33189292-33189333)
chr2 (296-337)||(41461633-41461674)
chr2 (294-334)||(769034-769074)
chr2 (293-337)||(784790-784834)
chr2 (294-334)||(11141303-11141343)
chr2 (293-337)||(11684596-11684640)
chr2 (289-337)||(17180290-17180338)
chr2 (294-337)||(27033488-27033531)
chr2 (283-334)||(35047714-35047765)
chr2 (296-334)||(1583844-1583882)
chr2 (294-336)||(14954264-14954306)
chr2 (290-331)||(3345757-3345798)
chr2 (288-337)||(7228044-7228093)
chr2 (291-331)||(14537305-14537345)
chr2 (291-331)||(19231305-19231345)
chr2 (294-334)||(39630223-39630263)
chr2 (298-337)||(11793897-11793936)
chr2 (293-331)||(41585710-41585748)
chr2 (296-337)||(784911-784952)
chr2 (304-337)||(11716517-11716550)
chr2 (302-331)||(11824704-11824733)
chr2 (298-331)||(11824786-11824819)
chr2 (304-337)||(30698289-30698322)
chr2 (291-331)||(11595332-11595372)
chr2 (296-336)||(13017779-13017819)
chr2 (293-337)||(17905651-17905695)
[»] scaffold0009 (2 HSPs)
scaffold0009 (296-337)||(41997-42038)
scaffold0009 (294-337)||(42096-42139)
[»] scaffold0301 (1 HSPs)
scaffold0301 (298-334)||(7153-7189)
[»] scaffold1562 (2 HSPs)
scaffold1562 (298-337)||(523-562)
scaffold1562 (293-330)||(402-439)
[»] scaffold1158 (2 HSPs)
scaffold1158 (298-337)||(2031-2070)
scaffold1158 (293-330)||(2154-2191)
[»] scaffold0169 (1 HSPs)
scaffold0169 (292-337)||(4071-4116)
[»] scaffold0240 (1 HSPs)
scaffold0240 (296-331)||(17605-17640)
[»] scaffold0048 (1 HSPs)
scaffold0048 (298-337)||(82945-82984)
[»] scaffold0039 (1 HSPs)
scaffold0039 (296-331)||(109049-109084)
[»] scaffold0129 (1 HSPs)
scaffold0129 (291-337)||(19193-19239)
[»] scaffold0400 (1 HSPs)
scaffold0400 (297-337)||(4530-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (297-337)||(5174-5214)
[»] scaffold0027 (1 HSPs)
scaffold0027 (297-337)||(10887-10927)


Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 24712212 - 24712441
Alignment:
Q  3 acacacgcagagctgaacagatgccatgggactagttttggcggctgtgaaagaaaaaacagtaggcaagttgttataccacatagttcgttatgctctc 102  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712212 acacatgcagagctgaacagatgccatgggattagttttggcggttgtgaaagaaaaaacagtaggcaagttgttataccacatagttcgttatgctctc 24712311  T
Q  103 gtgaaattaattttcgctacattcaacatttcgccggatttaattacttaactaagtttccttcaaataaaaaattacttaactaagttacttaattctg 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712312 gtgaaattaatttttgctacattcaacatttcgccggatttaattacttaactaagtttccttcaaataaaaaattacttaactaagttacttaattctg 24712411  T
Q  203 atactgggttgcattgcaaatgtctgtgct 232  Q
    ||||||||||||||||||||||||||||||    
T  24712412 atactgggttgcattgcaaatgtctgtgct 24712441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 24712002 - 24711936
Alignment:
Q  231 ctcctcacactctttctcactttattatcttttctctatttatcttcacaaccaaacataccctaag 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712002 ctcctcacactctttctcactttattatcttttctctatttatcttcacaaccaaacataccctaag 24711936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 5644669 - 5644718
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  5644669 atactctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatg 5644718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 6498824 - 6498783
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 6498783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 29065812 - 29065860
Alignment:
Q  289 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  29065812 taccttaagagtgtgtttggatggatgaatgttttgagggaatgtaatg 29065860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 31632719 - 31632763
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  31632719 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 31632763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 43955514 - 43955558
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 43955558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 40110735 - 40110778
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatg 40110778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 14603329 - 14603283
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||    
T  14603329 atactctaagagtgtgtttggatgggggaatgttttgagggaatgta 14603283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 23548670 - 23548632
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgta 23548632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 9784989 - 9784952
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgta 9784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 26162196 - 26162155
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 26162155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 34399008 - 34398967
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 34398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 2057392 - 2057436
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatg 2057436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 35777017 - 35776973
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  35777017 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatg 35776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 39342703 - 39342663
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgta 39342663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 29195707 - 29195750
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  29195707 taagagtgtgtttggatggaggaatattttgaggtaatgtaatg 29195750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 43955671 - 43955632
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatg 43955632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 28539227 - 28539189
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgta 28539189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 35455804 - 35455842
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgta 35455842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 40110902 - 40110856
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||    
T  40110902 ccctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatg 40110856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 40853980 - 40854022
Alignment:
Q  289 taccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  40853980 tacccttagagtgtgtttggatgggggaatgttttgagggaat 40854022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 29065978 - 29065937
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatg 29065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 31913234 - 31913271
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Complemental strand, 40854133 - 40854089
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||    
T  40854133 cctaagagtgtgtttggatggggaaatgttctgagggaatgtaat 40854089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 29639276 - 29639233
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||    
T  29639276 taagagtgtgtatggatgggggaatgttttcagggaatgtaatg 29639233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 327
Target Start/End: Complemental strand, 30080846 - 30080811
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagg 327  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30080846 cctaagagtgtgtttggatgggggaatgttttgagg 30080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 30524253 - 30524296
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||    
T  30524253 taagagtgtgtatggatggagtaatgttttgaaggaatgtaatg 30524296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 32650591 - 32650626
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32650591 agagtgtgtttcgatggaggaatgttttgagggaat 32650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 30587943 - 30587909
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||| ||||||||||||||||||    
T  30587943 gagtgtgtttggatgggggaatgttttgagggaat 30587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Original strand, 30629061 - 30629095
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||| |||||||||||||||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgta 30629095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 2057554 - 2057513
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatg 2057513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 5644836 - 5644795
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||| ||||||||| |||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatg 5644795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 18789305 - 18789264
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||| ||||||| |||| |||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatg 18789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 23455312 - 23455268
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  23455312 acccttagaatgtgtttggatgagggaatgttttgagggaatgta 23455268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 34388424 - 34388384
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaat 34388384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 36103087 - 36103142
Alignment:
Q  282 ccaaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  36103087 ccaaacaaaacctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 36103142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 40046796 - 40046845
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40046796 ataccctaagagtgtgtttggatggatgaatgttttgagggaatgtaatg 40046845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 28324745 - 28324704
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 28324704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 33902667 - 33902708
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 33902708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 17111034 - 17110987
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  17111034 acccttagagtgtgtttggatggagaaatgttttgagggaatgtaatg 17110987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 30445001 - 30444963
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30445001 ctaagagtgtgtttggatggaggaatgttttgagggaat 30444963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 515615 - 515574
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatg 515574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 3853616 - 3853657
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 3853657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 3858074 - 3858115
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 3858115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 35979084 - 35979047
Alignment:
Q  299 gtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaat 35979047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 42739947 - 42739984
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42739947 taagagtgtgtttggatggaggaatgttttgagggaat 42739984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 44889354 - 44889395
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatg 44889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 17110866 - 17110910
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatg 17110910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 7202969 - 7202934
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  7202969 agagtgtgtttggatggaggaatgttttgagggaat 7202934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 14799975 - 14800014
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  14799975 cctaagagtgtgtttggatgggggaatgttttgagggaat 14800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 14991690 - 14991733
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatg 14991733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 27322734 - 27322691
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaatgtaatg 27322691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 331
Target Start/End: Complemental strand, 33377384 - 33377345
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  33377384 cctaagagtgtgtttggatgggggaatgttttgagggaat 33377345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 42711441 - 42711398
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaatgtaatg 42711398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 29257434 - 29257396
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgta 29257396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 14235 - 14279
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  14235 cctaagagtgtgtttggatgg-ggaatgtttggagggaatgtaatg 14279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 7202863 - 7202900
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| |||||||||||||||||    
T  7202863 taagagtgtgtttggatggatgaatgttttgagggaat 7202900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 24044960 - 24045001
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatg 24045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 29611382 - 29611423
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  29611382 acccttagagtgtgtttggatgggggaatgttttgagggaat 29611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Original strand, 30435250 - 30435287
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatg 30435287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 1088362 - 1088322
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  1088362 taagagtgtgtttgggtggaggaatgttttgagagaatgta 1088322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 32626120 - 32626076
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  32626120 ctaagagtgtgcttggatgggggaatcttttgagggaatgtaatg 32626076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 8409982 - 8409947
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||||||||||| |||||||    
T  8409982 agagtgtgtttggatggaggaatgttttaagggaat 8409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 23011732 - 23011775
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||| ||  |||||||||||||||||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatg 23011775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 34008799 - 34008834
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34008799 agagtgtgtttggatgggggaatgttttgagggaat 34008834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 334
Target Start/End: Complemental strand, 44346757 - 44346723
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||| |||||||||||||||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgta 44346723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 14800119 - 14800078
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatg 14800078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 36625292 - 36625255
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  36625292 taagagtgtgtttggatgaaggaatattttgagggaat 36625255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 4156333 - 4156285
Alignment:
Q  289 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||| |||||||||||||||  |||| ||||||||||||||||||    
T  4156333 taccttaatagtgtgtttggatgggagaatattttgagggaatgtaatg 4156285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 29482888 - 29482856
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaa 330  Q
    ||||||||||||||| |||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaa 29482856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 33986001 - 33986045
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||| |||| | |||||||||    
T  33986001 ctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatg 33986045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 44692987 - 44692940
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692987 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 44692940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 42006030 - 42005984
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42006030 ccctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 42005984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 44436254 - 44436299
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  44436254 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 44436299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 49457339 - 49457384
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  49457339 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 49457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 27252057 - 27252012
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  27252057 cctaagagtgtgtttggatggggggatgttttgagggaatgtaatg 27252012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 34088568 - 34088609
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgta 34088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 35279978 - 35279933
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  35279978 cctaagaatgtgtttggatgggggaatgttttgagggaatgtaatg 35279933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 46672875 - 46672834
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 46672834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 47767432 - 47767473
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 47767473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 54761620 - 54761583
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54761620 taagagtgtgtttggatggaggaatgttttgagggaat 54761583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 332124 - 332081
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  332124 ataccttaagagtgtgtttggatggaagaatgttttgagggaat 332081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 9129505 - 9129462
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatg 9129462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 9137612 - 9137569
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatg 9137569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 36398061 - 36398023
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgta 36398023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 48947605 - 48947643
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgta 48947643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 19475824 - 19475857
Alignment:
Q  304 tttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatg 19475857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 37054394 - 37054435
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatg 37054435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 44692822 - 44692863
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatg 44692863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 46001361 - 46001405
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||    
T  46001361 ctaagagtgtgtttggatggcggaatattttgaggtaatgtaatg 46001405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 53129918 - 53129874
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||    
T  53129918 ctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatg 53129874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 7302344 - 7302387
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatg 7302387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 46429414 - 46429449
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  46429414 agagtgtgtttggatgggggaatgttttgagggaat 46429449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 5415782 - 5415824
Alignment:
Q  295 aagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||| | ||||| ||||||||||||||||||    
T  5415782 aagagtgtgtttggataggggaatattttgagggaatgtaatg 5415824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 38506929 - 38506895
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||| ||||||||||||||||||||    
T  38506929 gagtgtgtttggatagaggaatgttttgagggaat 38506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 671694 - 671653
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||| ||||||| | |||||||||||||||||||||    
T  671694 ctaagagtgtttttggataggggaatgttttgagggaatgta 671653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 5415942 - 5415901
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatg 5415901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 21307600 - 21307563
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatg 21307563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 27485474 - 27485507
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||| ||||||||||||||||||    
T  27485474 agtgtgtttggatgggggaatgttttgagggaat 27485507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 37321659 - 37321622
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  37321659 taagagtgtgtttggattggggaatgttttgagggaat 37321622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 39110394 - 39110435
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||| || ||||||||||| ||||||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatg 39110435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 55460356 - 55460393
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  55460356 taagagcgtgtttggatgtaggaatgttttgagggaat 55460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 28918162 - 28918206
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 28918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 34245059 - 34245012
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34245059 acccttagagtgtgtttggatggaggaatgttttgagggaatgtaatg 34245012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 6919872 - 6919825
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6919872 accctaagagtgtgtttggatgggggaatgttttgagggaaagtaatg 6919825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 29889513 - 29889466
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  29889513 acccttagagtgtgtttggatggaggaatgttttgatggaatgtaatg 29889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 9285647 - 9285688
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 9285688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 1368477 - 1368517
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaat 1368517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 6919710 - 6919749
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatg 6919749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 9763173 - 9763130
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  9763173 taagagtgtgtttggatggaggaatattttgaggtaatgtaatg 9763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 776080 - 776121
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatg 776121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 8574687 - 8574736
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| ||||||||||||||||| | ||||||||||| ||||||||||    
T  8574687 atacccttagagtgtgtttggatggggaaatgttttgagtgaatgtaatg 8574736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 8574828 - 8574783
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||    
T  8574828 cctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatg 8574783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 1195348 - 1195384
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgaggga 329  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1195348 ctaagagtgtgtttggatgggggaatgttttgaggga 1195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 8475176 - 8475214
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  8475176 ctaagagtgtgtttggatggggaaatgttttgagggaat 8475214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 13487275 - 13487313
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgta 13487313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 15299579 - 15299543
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15299579 tgtgtttggatgg-ggaatgttttgagggaatgtaatg 15299543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 776242 - 776198
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||| |   ||||||||||||||||||||||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatg 776198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 5658765 - 5658817
Alignment:
Q  285 aacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5658765 aacaaaccctaagagtgtgtttggatggagaaatgttttgagggaatgtaatg 5658817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 40643980 - 40643935
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40643980 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 40643935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 25935363 - 25935319
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  25935363 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 25935319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 15374121 - 15374078
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaatgtaatg 15374078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 19533975 - 19533936
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatg 19533936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 2316376 - 2316418
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaatgtaat 2316418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 41762289 - 41762247
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  41762289 cctaagagtgtgtttggatgggggaatgttttgagggaatgta 41762247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 2550322 - 2550363
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  2550322 accctaagagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 15270908 - 15270871
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15270908 taagagtgtgtttggatggaggaatgttttgagggaat 15270871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 22303940 - 22303899
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 22303899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 32470878 - 32470923
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  32470878 cctaagagtgtatttggatggagaaatgttttgagggaatgtaatg 32470923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 15804316 - 15804360
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  15804316 accctgagagtgtgtttggatgggggaatgttttgagggaatgta 15804360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 290 - 334
Target Start/End: Original strand, 34982210 - 34982254
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  34982210 accctaagagtgtgtttggataggggaatgttttgagggaatgta 34982254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 40090487 - 40090443
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  40090487 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatg 40090443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 2721628 - 2721589
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatg 2721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 28828369 - 28828408
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatg 28828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 34982348 - 34982313
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||    
T  34982348 agagtgtgtttggatggaggaatgttttgagggaat 34982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 37722970 - 37722923
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  37722970 acccttagagtgtgtttggatgggggaatattttgagggaatgtaatg 37722923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 22305109 - 22305147
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  22305109 ctaagagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 927299 - 927340
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  927299 ctaagagtgtgtttggatggggaaatgttttgagggaatgta 927340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 9764497 - 9764456
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatg 9764456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 9894388 - 9894351
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatg 9894351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 15373960 - 15374001
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatg 15374001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 22766952 - 22766993
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatg 22766993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 26281339 - 26281298
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatg 26281298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 33245446 - 33245401
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||    
T  33245446 cctatgagtgtgtttggatgggggaatgttttgatggaatgtaatg 33245401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 3563278 - 3563318
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatg 3563318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 9764335 - 9764379
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatg 9764379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 13243449 - 13243500
Alignment:
Q  288 ataccctaagagtgtgtttg--gatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||  ||||  ||||||||||||||||||||||||    
T  13243449 ataccctaagagtgtgtttgtggatgagggaatgttttgagggaatgtaatg 13243500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 20523133 - 20523173
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaat 20523173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 20523291 - 20523251
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatg 20523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 23092128 - 23092080
Alignment:
Q  289 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||||||| ||||||||||||  ||||||||||    
T  23092128 taccataagagtgtgtttggatgggggaatgttttgaacgaatgtaatg 23092080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 15804451 - 15804412
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatg 15804412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 32250169 - 32250127
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  32250169 taagagtgtgtttggatgg-ggaatgttttgagggaaagtaatg 32250127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 33146061 - 33146096
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33146061 agagtgtgtttggatgggggaatgttttgagggaat 33146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 33146191 - 33146226
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33146191 agagtgtgtttggatgggggaatgttttgagggaat 33146226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 37145569 - 37145530
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatg 37145530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 326
Target Start/End: Original strand, 34105089 - 34105119
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgag 326  Q
    |||||||||||||||||||||||||||||||    
T  34105089 agagtgtgtttggatggaggaatgttttgag 34105119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 40809336 - 40809382
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||| | ||||||||||| |||| |||||    
T  40809336 ccctaagagtgtgtttggatggggaaatgttttgagagaatataatg 40809382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 2316537 - 2316497
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  2316537 agagtgtgtttggatggaa-aatgttttgagggaatgtaatg 2316497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 22302533 - 22302574
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||| ||||||||||||||||| | ||||||||||||||||    
T  22302533 acccttagagtgtgtttggatggggtaatgttttgagggaat 22302574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 40643838 - 40643871
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||    
T  40643838 agtgtgtttggatggagaaatgttttgagggaat 40643871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 6634012 - 6634056
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| || || |||||||| |||||||||    
T  6634012 ctaagagtgtgtttggatggggggatattttgaggtaatgtaatg 6634056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 16515180 - 16515136
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||   ||||||||| |||||||||||||    
T  16515180 ctaagagtgtgtttggatgagagaatgtttttagggaatgtaatg 16515136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 36456088 - 36456045
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36456088 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 36456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 31742924 - 31742882
Alignment:
Q  295 aagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31742924 aagagtgtgtttggatggaggaatgttttgagggaatgtaatg 31742882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 14982280 - 14982321
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 14982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 41498651 - 41498608
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaatgtaatg 41498608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 1112601 - 1112646
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  1112601 cctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatg 1112646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 7352975 - 7352930
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    
T  7352975 cctaagagtgtgtttggatggggaaatgttttgagggaatgtaatg 7352930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 31473849 - 31473890
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 31473890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 49111471 - 49111430
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 49111430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 4441338 - 4441378
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatg 4441378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 28845876 - 28845912
Alignment:
Q  301 gtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatg 28845912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 7352814 - 7352853
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatg 7352853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 42543024 - 42542985
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatg 42542985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 10633035 - 10633073
Alignment:
Q  299 gtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatg 10633073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 857398 - 857357
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatg 857357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 1539649 - 1539682
Alignment:
Q  304 tttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatg 1539682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 15660342 - 15660301
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatg 15660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 16516171 - 16516212
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatg 16516212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 21012633 - 21012596
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21012633 taagagtgtgtttggatggacgaatgttttgagggaat 21012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 36455907 - 36455948
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatg 36455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 10128139 - 10128092
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  10128139 acccttagagtgtatttggatgggggaatgttttgagagaatgtaatg 10128092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 26251050 - 26251015
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaat 26251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 2125857 - 2125895
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgta 2125895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 4896643 - 4896689
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  4896643 cccttagagtgtgtttggatgggggaatattttgaggtaatgtaatg 4896689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 42844541 - 42844583
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||| | ||||| |||||||||||||||||||||||    
T  42844541 taagagtgtgtatagatgggggaatgttttgagggaatgtaat 42844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 467960 - 467920
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  467960 agagtgtgtttggatggag-aatgttttgatggaatgtaatg 467920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 11040968 - 11041008
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  11040968 agagtgtgtttggatgg-ggaatattttgagggaatgtaatg 11041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 11348396 - 11348355
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| ||||||||| |||||||||| |||||||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatg 11348355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 14982422 - 14982385
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaat 14982385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 28846030 - 28845989
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| | |||||||||||||||| |||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatg 28845989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 42775625 - 42775658
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||| ||||||||||||||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaat 42775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 54566188 - 54566225
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||| | |||||||||||||||||    
T  54566188 taagagtgtgtttggatgaaagaatgttttgagggaat 54566225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 4896794 - 4896750
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||    
T  4896794 ctaatagtgtgtttggatggggaaatattttgagggaatgtaatg 4896750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 15660180 - 15660224
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||| | ||||| |||||||| |||||||||    
T  15660180 ctaagagtgtgtttggataggggaatattttgaggtaatgtaatg 15660224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 55266934 - 55266894
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataat 55266894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 15034657 - 15034700
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 15034700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 26501154 - 26501111
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 26501111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 8224760 - 8224809
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8224760 ataccctaagagtgtgtttggatgagggaatgttttgagggaatgtaatg 8224809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 23536065 - 23536108
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatg 23536108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 27804426 - 27804383
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgaggaaatgtaatg 27804383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 43623057 - 43623010
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  43623057 accctaagagtgtgtttggatgggggaatgttttgatggaatgtaatg 43623010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 27935649 - 27935603
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  27935649 ccctaagagtgtgtttggatggagaaatattttgagggaatgtaatg 27935603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 32288007 - 32287965
Alignment:
Q  295 aagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatg 32287965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 15034818 - 15034777
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 15034777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 24273293 - 24273252
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 24273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 30190295 - 30190254
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 30190254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 45565540 - 45565500
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  45565540 ccctaagagtgtgtttggatggaagaatgttttgagggaat 45565500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 4038073 - 4038116
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaatgtaatg 4038116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 5474414 - 5474457
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 15245456 - 15245495
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15245456 cctaagagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 47165295 - 47165244
Alignment:
Q  286 acataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| | ||||||||||||||||||| |||||||||||| |||||||||    
T  47165295 acatacctttagagtgtgtttggatggagaaatgttttgaggaaatgtaatg 47165244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 34756422 - 34756468
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| |||| |||||||||||| ||||||||||||||||||||||||    
T  34756422 cccttagagagtgtttggatgggggaatgttttgagggaatgtaatg 34756468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 51847855 - 51847893
Alignment:
Q  299 gtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatg 51847893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 6470759 - 6470718
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||| ||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatg 6470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 336
Target Start/End: Original strand, 27804269 - 27804305
Alignment:
Q  300 tgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaat 27804305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 41823220 - 41823180
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  41823220 ccctaagagtgtgtttggatgggggaatgttttgaaggaat 41823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 44667583 - 44667623
Alignment:
Q  92 gttatgctctcgtgaaattaattttcgctacattcaacatt 132  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  44667583 gttatgctcttgtgaaattaagtttcgctacattcaacatt 44667623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 49659214 - 49659257
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  49659214 ctaagagtgtgtttggatgg-ggaatgtattgagggaatgtaatg 49659257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 32572940 - 32572975
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32572940 agagtgtgtttggatgggggaatgttttgagggaat 32572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 50005236 - 50005197
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatg 50005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 28632663 - 28632617
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||| ||||||||||||||  ||||||||| ||||||||||||||    
T  28632663 ccctaatagtgtgtttggatgagggaatgtttggagggaatgtaatg 28632617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 29446745 - 29446791
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| | || |||||||||||| |||||||||||    
T  29446745 ccctaagagtgtgtttgaacgggggaatgttttgaaggaatgtaatg 29446791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 45565397 - 45565435
Alignment:
Q  299 gtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatg 45565435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 50471765 - 50471803
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  50471765 ctaagagtgtgtttggatgggggaaagttttgagggaat 50471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 4038234 - 4038193
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatg 4038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 40264046 - 40264083
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  40264046 taagagtgtgtttggataggggaatgttttgagggaat 40264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 44410311 - 44410352
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||| |||||||||  |||||||||||||||||||||||    
T  44410311 agagtgtatttggatgggagaatgttttgagggaatgtaatg 44410352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 38277412 - 38277456
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||   |||| ||||||||||||||||||    
T  38277412 ctaagagtgtgtttggatgagagaatattttgagggaatgtaatg 38277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 50005064 - 50005120
Alignment:
Q  281 accaaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||  ||| ||||||||||||||||||  ||||| ||||||| ||||||||||    
T  50005064 accaaacggaccataagagtgtgtttggatgacggaatattttgagagaatgtaatg 50005120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 14365858 - 14365817
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 14365817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 10480116 - 10480160
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatg 10480160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 14365698 - 14365741
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatg 14365741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 14537198 - 14537240
Alignment:
Q  295 aagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatg 14537240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 3092279 - 3092320
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  3092279 ctaagagtgtatttggatggaggaatgttttgagggaatgta 3092320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 11684733 - 11684696
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11684733 taagagtgtgtttggatggaggaatgttttgagggaat 11684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 11716408 - 11716449
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatg 11716449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 33189333 - 33189292
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33189333 ctaagagtgtgtttggatgggggaatgttttgagggaatgta 33189292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 41461674 - 41461633
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatg 41461633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 769034 - 769074
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgta 769074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 784790 - 784834
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatg 784834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 11141303 - 11141343
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgta 11141343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 11684596 - 11684640
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatg 11684640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 17180290 - 17180338
Alignment:
Q  289 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  17180290 taccttaagagtgtgtttggatgagggaatgttttgagggaatgtaatg 17180338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 27033488 - 27033531
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatg 27033531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 35047765 - 35047714
Alignment:
Q  283 caaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  35047765 caaacagacccttagagtgtgtttggatgggggaatgttttgaggaaatgta 35047714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 1583882 - 1583844
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgta 1583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 14954264 - 14954306
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  14954264 taagagtgtgtttggatagaggaatgttttgagtgaatgtaat 14954306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 3345757 - 3345798
Alignment:
Q  290 accctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  3345757 accctaaaagtgtgtttggatgggggaatgttttgagggaat 3345798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 7228093 - 7228044
Alignment:
Q  288 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||| ||||||||||||||||||| | ||||||||||| ||||||||||    
T  7228093 ataccttaagagtgtgtttggatggggaaatgttttgagagaatgtaatg 7228044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 14537345 - 14537305
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  14537345 cccttagagtgtgtttggatgggggaatgttttgagggaat 14537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 19231345 - 19231305
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  19231345 ccctaagattgtgtttggatgggggaatgttttgagggaat 19231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 39630223 - 39630263
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgta 39630263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 11793897 - 11793936
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatg 11793936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 41585748 - 41585710
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  41585748 ctaagagtgtgtttggatggtgaaatgttttgagggaat 41585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 784952 - 784911
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||| ||||| |||||| |||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatg 784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Complemental strand, 11716550 - 11716517
Alignment:
Q  304 tttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||| ||||||||||||||||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatg 11716517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 331
Target Start/End: Original strand, 11824704 - 11824733
Alignment:
Q  302 tgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||||||||||||||||    
T  11824704 tgtttggatggaggaatgttttgagggaat 11824733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 11824819 - 11824786
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||| ||||||||||||||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaat 11824786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 337
Target Start/End: Original strand, 30698289 - 30698322
Alignment:
Q  304 tttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||| ||||||||||||||||||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatg 30698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 11595332 - 11595372
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaat 331  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  11595332 ccctaatagtgtgtttggatggggtaatgttttgagggaat 11595372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 13017779 - 13017819
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaat 336  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaat 13017819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 17905651 - 17905695
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||| |||||  ||||||||||||| ||||||||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatg 17905695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 337
Target Start/End: Original strand, 41997 - 42038
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatg 42038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 42139 - 42096
Alignment:
Q  294 taagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaatgtaatg 42096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 7153 - 7189
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgta 334  Q
    |||||||||||||||||||||||||||||||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgta 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 562 - 523
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatg 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 402 - 439
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaa 330  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  402 ctaagagtgtgtttggatgggggaatattttgagggaa 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 2031 - 2070
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatg 2070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 2191 - 2154
Alignment:
Q  293 ctaagagtgtgtttggatggaggaatgttttgagggaa 330  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  2191 ctaagagtgtgtttggatgggggaatattttgagggaa 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 4071 - 4116
Alignment:
Q  292 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||    
T  4071 cctaagagtgtgtttggataaaggaatgttttgagagaatgtaatg 4116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 17640 - 17605
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17640 agagtgtgtttggatgggggaatgttttgagggaat 17605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 82945 - 82984
Alignment:
Q  298 agtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatg 82984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 109049 - 109084
Alignment:
Q  296 agagtgtgtttggatggaggaatgttttgagggaat 331  Q
    ||||||||||||||||| ||||||||||||||||||    
T  109049 agagtgtgtttggatgggggaatgttttgagggaat 109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 19193 - 19239
Alignment:
Q  291 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  19193 ccctaaaagtgtgtttggatgggggagtattttgagggaatgtaatg 19239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 4570 - 4530
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatg 4530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 5214 - 5174
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    |||||||||||||||  |||||||||||||||||| |||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatg 5174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 10887 - 10927
Alignment:
Q  297 gagtgtgtttggatggaggaatgttttgagggaatgtaatg 337  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatg 10927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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