View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20985_low_39 (Length: 301)

Name: NF20985_low_39
Description: NF20985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20985_low_39
NF20985_low_39
[»] chr5 (17 HSPs)
chr5 (18-237)||(3582046-3582263)
chr5 (237-301)||(7016951-7017016)
chr5 (240-301)||(33656297-33656359)
chr5 (238-301)||(43319134-43319199)
chr5 (238-297)||(21146955-21147015)
chr5 (242-294)||(5273223-5273276)
chr5 (242-301)||(9689553-9689612)
chr5 (235-301)||(32158153-32158220)
chr5 (240-298)||(27459206-27459265)
chr5 (240-301)||(6460682-6460744)
chr5 (241-283)||(16894132-16894174)
chr5 (240-301)||(27786210-27786272)
chr5 (238-301)||(4550511-4550575)
chr5 (238-301)||(14000359-14000423)
chr5 (232-301)||(28594464-28594535)
chr5 (243-301)||(37013807-37013866)
chr5 (235-283)||(40410585-40410633)
[»] chr3 (37 HSPs)
chr3 (238-301)||(20498097-20498160)
chr3 (235-301)||(996340-996407)
chr3 (238-301)||(12734095-12734159)
chr3 (239-301)||(3206451-3206514)
chr3 (237-301)||(19253713-19253778)
chr3 (235-301)||(1440207-1440273)
chr3 (235-301)||(6589447-6589515)
chr3 (237-301)||(10139401-10139466)
chr3 (239-301)||(22057651-22057715)
chr3 (237-301)||(33808057-33808122)
chr3 (234-301)||(29449115-29449183)
chr3 (222-292)||(16010734-16010805)
chr3 (239-296)||(33996751-33996809)
chr3 (240-301)||(37820732-37820794)
chr3 (234-301)||(35337617-35337686)
chr3 (243-294)||(29029898-29029950)
chr3 (238-301)||(40246731-40246795)
chr3 (239-301)||(52114418-52114481)
chr3 (233-301)||(6035307-6035376)
chr3 (237-301)||(15493986-15494051)
chr3 (238-301)||(10660422-10660486)
chr3 (238-301)||(36674385-36674449)
chr3 (239-301)||(45926971-45927034)
chr3 (236-301)||(27240498-27240564)
chr3 (238-284)||(50901214-50901260)
chr3 (237-283)||(51699753-51699799)
chr3 (237-293)||(25418252-25418309)
chr3 (237-301)||(39842684-39842749)
chr3 (261-301)||(44762292-44762333)
chr3 (240-292)||(54625481-54625534)
chr3 (235-283)||(19552189-19552237)
chr3 (238-301)||(23753641-23753705)
chr3 (235-283)||(26555809-26555857)
chr3 (238-301)||(31646539-31646603)
chr3 (238-301)||(50762305-50762369)
chr3 (239-275)||(52079881-52079917)
chr3 (238-301)||(52618220-52618284)
[»] chr8 (30 HSPs)
chr8 (235-301)||(23115422-23115489)
chr8 (240-301)||(42937250-42937312)
chr8 (238-301)||(42735531-42735595)
chr8 (240-301)||(7507153-7507215)
chr8 (238-301)||(24502025-24502089)
chr8 (238-301)||(26374682-26374746)
chr8 (242-301)||(41478989-41479049)
chr8 (238-301)||(26373692-26373757)
chr8 (238-301)||(2705073-2705137)
chr8 (239-301)||(24214845-24214908)
chr8 (242-301)||(43959549-43959610)
chr8 (239-301)||(32711536-32711599)
chr8 (234-301)||(8543403-8543472)
chr8 (240-301)||(42938371-42938433)
chr8 (237-301)||(5576875-5576940)
chr8 (243-301)||(32497376-32497435)
chr8 (233-301)||(44726064-44726133)
chr8 (238-301)||(4031512-4031576)
chr8 (238-301)||(9288704-9288768)
chr8 (243-295)||(9771077-9771128)
chr8 (238-301)||(14782389-14782453)
chr8 (238-293)||(4950236-4950291)
chr8 (237-283)||(29260317-29260363)
chr8 (237-283)||(41069802-41069848)
chr8 (233-301)||(7466218-7466287)
chr8 (234-301)||(18958981-18959050)
chr8 (233-301)||(31623578-31623647)
chr8 (243-284)||(39190043-39190084)
chr8 (239-283)||(35142041-35142085)
chr8 (238-301)||(42306039-42306103)
[»] chr7 (33 HSPs)
chr7 (235-301)||(44343650-44343717)
chr7 (237-301)||(8078283-8078348)
chr7 (238-301)||(30440685-30440749)
chr7 (241-301)||(32143173-32143235)
chr7 (235-301)||(34695117-34695184)
chr7 (237-298)||(34008903-34008965)
chr7 (237-301)||(18914989-18915054)
chr7 (240-301)||(973074-973137)
chr7 (242-301)||(20275517-20275577)
chr7 (232-301)||(40996903-40996974)
chr7 (240-301)||(39219589-39219651)
chr7 (240-301)||(43581344-43581406)
chr7 (240-301)||(47879059-47879121)
chr7 (240-301)||(47914157-47914219)
chr7 (243-301)||(43679363-43679423)
chr7 (238-301)||(12893297-12893361)
chr7 (242-300)||(727405-727464)
chr7 (240-297)||(31638766-31638824)
chr7 (237-301)||(509579-509644)
chr7 (237-297)||(31401584-31401645)
chr7 (233-283)||(7113337-7113390)
chr7 (243-301)||(7719515-7719574)
chr7 (237-301)||(9179764-9179829)
chr7 (237-301)||(29615018-29615083)
chr7 (238-301)||(28342229-28342293)
chr7 (235-301)||(7993021-7993088)
chr7 (243-301)||(41827201-41827260)
chr7 (233-301)||(10068342-10068412)
chr7 (232-301)||(23101174-23101244)
chr7 (232-301)||(32883657-32883727)
chr7 (236-284)||(37649734-37649782)
chr7 (234-301)||(39027975-39028043)
chr7 (238-301)||(48117847-48117911)
[»] chr1 (36 HSPs)
chr1 (238-301)||(730030-730093)
chr1 (237-301)||(953699-953764)
chr1 (237-301)||(28824627-28824692)
chr1 (238-301)||(19452105-19452169)
chr1 (238-301)||(21222029-21222093)
chr1 (238-301)||(22183251-22183315)
chr1 (238-301)||(45760265-45760329)
chr1 (239-301)||(35279554-35279617)
chr1 (239-301)||(49198522-49198585)
chr1 (240-301)||(35679383-35679445)
chr1 (242-301)||(47654608-47654669)
chr1 (237-301)||(6304509-6304574)
chr1 (236-297)||(49417963-49418025)
chr1 (238-301)||(33025393-33025457)
chr1 (238-301)||(50192806-50192870)
chr1 (245-296)||(48524208-48524259)
chr1 (240-301)||(47780502-47780564)
chr1 (250-301)||(31572418-31572470)
chr1 (238-301)||(14494093-14494154)
chr1 (237-283)||(28541384-28541430)
chr1 (238-301)||(6312455-6312519)
chr1 (238-301)||(9322755-9322819)
chr1 (240-284)||(19893451-19893495)
chr1 (238-297)||(49230767-49230827)
chr1 (243-301)||(15835308-15835367)
chr1 (235-301)||(29396643-29396710)
chr1 (237-283)||(14229093-14229139)
chr1 (237-301)||(9577687-9577752)
chr1 (237-301)||(46327922-46327987)
chr1 (238-301)||(8141383-8141447)
chr1 (235-298)||(19007604-19007668)
chr1 (238-301)||(25612038-25612102)
chr1 (233-299)||(28387650-28387718)
chr1 (238-301)||(29219169-29219233)
chr1 (240-301)||(31622692-31622755)
chr1 (238-301)||(42657712-42657776)
[»] scaffold0037 (1 HSPs)
scaffold0037 (234-299)||(100095-100161)
[»] chr4 (40 HSPs)
chr4 (238-301)||(41881338-41881403)
chr4 (237-301)||(22201901-22201966)
chr4 (235-301)||(40537400-40537467)
chr4 (237-301)||(42786653-42786719)
chr4 (240-301)||(24131227-24131289)
chr4 (238-301)||(1044697-1044761)
chr4 (234-301)||(39479612-39479680)
chr4 (235-301)||(25331015-25331082)
chr4 (237-299)||(30009934-30009997)
chr4 (240-301)||(25445983-25446044)
chr4 (240-301)||(28541587-28541649)
chr4 (240-301)||(7250028-7250090)
chr4 (234-301)||(20021226-20021295)
chr4 (242-301)||(31314983-31315043)
chr4 (238-301)||(37915672-37915736)
chr4 (236-294)||(46635905-46635964)
chr4 (240-301)||(37046707-37046769)
chr4 (249-301)||(32951091-32951144)
chr4 (240-296)||(55302732-55302789)
chr4 (241-301)||(1112784-1112844)
chr4 (238-301)||(23987143-23987207)
chr4 (238-301)||(19741163-19741226)
chr4 (240-294)||(27454352-27454407)
chr4 (243-301)||(30967554-30967613)
chr4 (235-301)||(54341028-54341095)
chr4 (240-301)||(7007262-7007324)
chr4 (232-297)||(41320631-41320697)
chr4 (261-301)||(34228837-34228878)
chr4 (238-301)||(5441291-5441355)
chr4 (238-301)||(23464840-23464906)
chr4 (238-301)||(27767943-27768007)
chr4 (233-284)||(34141639-34141690)
chr4 (244-283)||(44775947-44775986)
chr4 (240-283)||(49469210-49469253)
chr4 (242-300)||(53275727-53275786)
chr4 (240-301)||(25504894-25504955)
chr4 (238-284)||(44646719-44646765)
chr4 (244-301)||(49835068-49835126)
chr4 (238-301)||(54853723-54853787)
chr4 (232-284)||(56445637-56445689)
[»] scaffold0113 (1 HSPs)
scaffold0113 (233-301)||(39108-39177)
[»] chr6 (11 HSPs)
chr6 (237-301)||(2300992-2301057)
chr6 (238-301)||(29076484-29076549)
chr6 (238-301)||(29111457-29111522)
chr6 (238-297)||(6197736-6197796)
chr6 (240-301)||(1391513-1391575)
chr6 (237-301)||(7051731-7051796)
chr6 (238-287)||(25839722-25839771)
chr6 (233-301)||(31895578-31895647)
chr6 (237-301)||(34773295-34773360)
chr6 (235-263)||(656858-656886)
chr6 (238-301)||(14262687-14262751)
[»] chr2 (26 HSPs)
chr2 (237-301)||(31170881-31170946)
chr2 (234-301)||(12407265-12407333)
chr2 (238-301)||(24776244-24776308)
chr2 (239-301)||(20605042-20605105)
chr2 (233-294)||(9120052-9120114)
chr2 (240-301)||(22552020-22552082)
chr2 (241-301)||(14198833-14198894)
chr2 (241-301)||(44765667-44765728)
chr2 (237-301)||(305723-305789)
chr2 (239-301)||(16269581-16269644)
chr2 (233-301)||(378862-378932)
chr2 (239-301)||(35316952-35317015)
chr2 (238-301)||(1789331-1789395)
chr2 (235-301)||(26601457-26601524)
chr2 (251-301)||(32125152-32125203)
chr2 (232-301)||(19144907-19144977)
chr2 (232-301)||(28844438-28844508)
chr2 (239-299)||(43847536-43847597)
chr2 (239-283)||(14920622-14920666)
chr2 (238-301)||(26788673-26788737)
chr2 (241-284)||(3858226-3858269)
chr2 (244-279)||(5093317-5093352)
chr2 (243-301)||(43078569-43078628)
chr2 (244-301)||(28740540-28740598)
chr2 (234-301)||(3463555-3463624)
chr2 (238-301)||(215482-215546)
[»] scaffold0151 (1 HSPs)
scaffold0151 (240-301)||(38775-38837)
[»] scaffold0651 (1 HSPs)
scaffold0651 (242-301)||(8654-8714)
[»] scaffold0472 (1 HSPs)
scaffold0472 (235-284)||(1925-1974)
[»] scaffold0004 (1 HSPs)
scaffold0004 (235-283)||(102021-102069)
[»] scaffold0400 (1 HSPs)
scaffold0400 (238-301)||(15288-15349)
[»] scaffold0365 (1 HSPs)
scaffold0365 (238-301)||(15931-15992)
[»] scaffold0543 (1 HSPs)
scaffold0543 (243-301)||(10453-10512)
[»] scaffold0153 (1 HSPs)
scaffold0153 (232-283)||(34843-34894)
[»] scaffold0492 (1 HSPs)
scaffold0492 (243-299)||(12030-12087)
[»] scaffold0306 (1 HSPs)
scaffold0306 (234-301)||(13807-13876)
[»] scaffold0152 (1 HSPs)
scaffold0152 (234-301)||(21451-21520)
[»] scaffold0016 (1 HSPs)
scaffold0016 (238-283)||(81823-81868)
[»] scaffold0042 (1 HSPs)
scaffold0042 (238-301)||(58289-58353)


Alignment Details
Target: chr5 (Bit Score: 156; Significance: 7e-83; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 3582046 - 3582263
Alignment:
Q  18 cttctgtagtaatttcttatccagaaacagaaattaaaaagaaagggatatacacnnnnnnnnncttcttctagatacgtagggccacacacaaatcgta 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||         ||||||||||||| ||||| ||||||||||||||||    
T  3582046 cttctgtagtaatttcttatccagaaacagaaattaaaaagaaaaggatatatactttttttt-cttcttctagatatgtagg-ccacacacaaatcgta 3582143  T
Q  118 gtagatactcataagttaaccagaaatggtggttaagccaagtcttctccaaaatgttgacttgacaaataatgtttctccaccaaaaggctagtgaggc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3582144 gtagatactcataagttaaccagaaatggtggttaagccaagttttctccaaaatgttgacttcagaaataatgtttctccaccaaaaggctagtgaggc 3582243  T
Q  218 ggttttgattctgttattaa 237  Q
    ||||||||||||||||||||    
T  3582244 ggttttgattctgttattaa 3582263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 7017016 - 7016951
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  7017016 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 7016951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 33656359 - 33656297
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgt 33656297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 43319134 - 43319199
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgt 43319199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 21146955 - 21147015
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtc 297  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtc 21147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 5273276 - 5273223
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaa 294  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaa 5273223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 9689553 - 9689612
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaagtcttgt 301  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagactttttattatgaaaaagtcttgt 9689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 32158220 - 32158153
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||| ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  32158220 taagggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgt 32158153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 27459265 - 27459206
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtct 298  Q
    |||||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtct 27459206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 6460682 - 6460744
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgt 6460744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 16894174 - 16894132
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttt 16894132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 27786210 - 27786272
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||||| || ||||||||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgt 27786272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 4550575 - 4550511
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  4550575 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 4550511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 14000423 - 14000359
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  14000423 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 14000359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 28594535 - 28594464
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagact--ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||| |||   ||||||||| ||||||||||||||  |||||| || ||||||||||||    
T  28594535 tattaagggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgt 28594464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 37013807 - 37013866
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| |||||| || | |||||||||||||||||| || |||||||||||||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgt 37013866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 40410585 - 40410633
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||   ||||| || |||||||||||||||||||    
T  40410585 taagggggtgtattggattgagatttcaatggattttaaaagacttttt 40410633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 20498097 - 20498160
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagactttttatcatgaaaaagtcttgt 20498160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 996407 - 996340
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  996407 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 12734159 - 12734095
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 12734095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 3206514 - 3206451
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 3206451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 19253713 - 19253778
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  19253713 agggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 19253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 1440273 - 1440207
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaagtcttgt 301  Q
    ||||||| |||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  1440273 taaggggatgtattgggtcatgattctaagagattttaaaatactttttatcatgaaaaagtcttgt 1440207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 6589447 - 6589515
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||||    
T  6589447 taaggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgt 6589515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 10139466 - 10139401
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  10139466 agggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgt 10139401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 22057651 - 22057715
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgt 22057715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 33808122 - 33808057
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  33808122 agggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgt 33808057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 29449183 - 29449115
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| ||||||    
T  29449183 ttaagggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgt 29449115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 16010734 - 16010805
Alignment:
Q  222 ttgattctgttattaagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaa 292  Q
    |||||||| || ||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  16010734 ttgattctttttttaggggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 33996809 - 33996751
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagt 296  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaagt 33996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 37820794 - 37820732
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 37820732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 35337617 - 35337686
Alignment:
Q  234 ttaagggggtgtattgga-tcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||| || |||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  35337617 ttaagggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgt 35337686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 29029898 - 29029950
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagactttt-tatcatgaaaaa 294  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaa 29029950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 40246731 - 40246795
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||| |||||||||| || |||||||| ||||||||||||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgt 40246795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 52114418 - 52114481
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||| |||||||||||| ||||| |||||||||||  |||||||||||| ||||||||||    
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgt 52114481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 6035376 - 6035307
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||||||||  ||| | ||||||| |||||||||||||||||||| || |||||||| ||||||    
T  6035376 attaagggggtgtatcagattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgt 6035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 15494051 - 15493986
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| || ||| ||||||||||||||||||||||| || |||||||| ||||||    
T  15494051 aggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgt 15493986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 10660422 - 10660486
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  10660422 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgt 10660486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 36674449 - 36674385
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  36674449 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 36674385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 45927034 - 45926971
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||||||||   |||||||| ||||||||||||||||||| || || ||||||||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaagtcttgt 45926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 27240564 - 27240498
Alignment:
Q  236 aagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  27240564 aaggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 27240498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 50901260 - 50901214
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    |||| |||||||||| |  ||||||||||||||||||||||||||||    
T  50901260 ggggatgtattggattaaaattttaagggattttaaaagacttttta 50901214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 51699799 - 51699753
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||||||| |||  |||||||||||| |||||    
T  51699799 agggggtgtattggatcatgattataaaagattttaaaagatttttt 51699753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 25418252 - 25418309
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaa 293  Q
    ||||||| ||||||||||||||| |||| |||||||||| |  |||||||||||||||    
T  25418252 agggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaa 25418309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 39842749 - 39842684
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||| ||||    
T  39842749 aggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgt 39842684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 44762333 - 44762292
Alignment:
Q  261 taagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  44762333 taagggattttaaaagacttttttataatgaaaaagtcttgt 44762292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 54625481 - 54625534
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaa 292  Q
    |||||||||||||||||||| |||| ||||||| ||||  ||||||||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaa 54625534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 19552237 - 19552189
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||   |||||||| ||||||||||||| |||||    
T  19552237 taagggggtgtattggattgagattttaaaggattttaaaagatttttt 19552189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 23753705 - 23753641
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| ||  ||||||||||||||||||| || |||||||||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgt 23753641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 26555809 - 26555857
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||   ||||| || |||||||||||||||||||    
T  26555809 taagggggtgtattggattgagatttcaaaggattttaaaagacttttt 26555857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 31646603 - 31646539
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| ||||||| || | |||| || |||||||||||||||||||| || |||||||||||||||    
T  31646603 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 31646539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 50762369 - 50762305
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||| ||||    
T  50762369 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgt 50762305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 52079881 - 52079917
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaa 275  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  52079881 ggggtgtattggatcatgattctaagtgattttaaaa 52079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 52618284 - 52618220
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||| ||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  52618284 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 52618220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 23115489 - 23115422
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  23115489 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 23115422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 42937250 - 42937312
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgt 42937312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 42735595 - 42735531
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 42735531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 7507215 - 7507153
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  7507215 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 7507153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 24502089 - 24502025
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  24502089 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgt 24502025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 26374746 - 26374682
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 26374682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 41478989 - 41479049
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 41479049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 26373692 - 26373757
Alignment:
Q  238 gggggtgtattgg-atcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  26373692 gggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 26373757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 2705137 - 2705073
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  2705137 gggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgt 2705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 24214908 - 24214845
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgt 24214845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 43959549 - 43959610
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    ||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgt 43959610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 32711599 - 32711536
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||| ||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgt 32711536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 8543403 - 8543472
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaaga--ctttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||| |||||||||| |||||||||||||||||   |||||||||| ||||||| ||||    
T  8543403 ttaagggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgt 8543472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 42938433 - 42938371
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||| |||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgt 42938371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 5576940 - 5576875
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||| |||||| |||||||||||||||||  ||||| |||||||| ||||||||    
T  5576940 agggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgt 5576875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 32497376 - 32497435
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| | |||| || |||||||||||||||||||| ||||||||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgt 32497435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 44726133 - 44726064
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  44726133 attagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 44726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 4031576 - 4031512
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  4031576 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 4031512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 9288768 - 9288704
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| |||||| || | |||||||||||||||||| || |||||||||||||||    
T  9288768 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgt 9288704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 9771128 - 9771077
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaag 295  Q
    |||||||||| | |||||||||||||||||||| | |||||||||||||||||    
T  9771128 tgtattggattaagattttaagggattttaaaata-tttttatcatgaaaaag 9771077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 14782453 - 14782389
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  14782453 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 14782389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 4950291 - 4950236
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaa 293  Q
    ||||||||||||||| | |||| |||| |||||||| ||||||||||| |||||||    
T  4950291 gggggtgtattggattaagattctaagagattttaatagactttttattatgaaaa 4950236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 29260363 - 29260317
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||    
T  29260363 agggggtgtattggattgagattttaaaggattttaaaagacttttt 29260317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 41069802 - 41069848
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||||    
T  41069802 agggggtgtattagattaagattttaagggattttaaaagatttttt 41069848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 7466218 - 7466287
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| | |||| || | |||||||||||| ||||| || |||||||||||||||    
T  7466218 attaaggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgt 7466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 18959050 - 18958981
Alignment:
Q  234 ttaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  18959050 ttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 18958981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 31623578 - 31623647
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| | |||| || || ||||||||||| ||||| || |||||||||||||||    
T  31623578 attaaggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgt 31623647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 39190084 - 39190043
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    |||||||||| | |||| ||||||||||||||||||||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagacttttta 39190043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 283
Target Start/End: Original strand, 35142041 - 35142085
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||   |||||||| |||||||||||||||||||    
T  35142041 ggggtgtattggattgagattttaatggattttaaaagacttttt 35142085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 42306103 - 42306039
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  42306103 ggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgt 42306039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 44343717 - 44343650
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  44343717 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 44343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 8078283 - 8078348
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  8078283 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgt 8078348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 30440685 - 30440749
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgt 30440749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 32143235 - 32143173
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagact--ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgt 32143173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 34695117 - 34695184
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  34695117 taagggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgt 34695184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 237 - 298
Target Start/End: Original strand, 34008903 - 34008965
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtct 298  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  34008903 agggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct 34008965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 18915054 - 18914989
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||    
T  18915054 agggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgt 18914989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 973074 - 973137
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga--ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgt 973137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 20275577 - 20275517
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgt 20275517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 40996974 - 40996903
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaaga--ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |   |||||||||||||| ||||||||    
T  40996974 tattaagggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgt 40996903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 39219651 - 39219589
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgt 39219589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 43581406 - 43581344
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgt 43581344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 47879059 - 47879121
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagactt-tttatcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgt 47879121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 47914157 - 47914219
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagactt-tttatcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgt 47914219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 43679363 - 43679423
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaaga--ctttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgt 43679423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 12893297 - 12893361
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||| |||||||||||  ||||| |||||||||||||||||    
T  12893297 gggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgt 12893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 727405 - 727464
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttg 300  Q
    |||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttg 727464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 31638766 - 31638824
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtc 297  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtc 31638824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 509579 - 509644
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||||||    
T  509579 aggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgt 509644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 297
Target Start/End: Original strand, 31401584 - 31401645
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtc 297  Q
    ||||||||||||||||||||||| ||| | | |||||||||| |||||||||||||||||||    
T  31401584 agggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaagtc 31401645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Original strand, 7113337 - 7113390
Alignment:
Q  233 attaagggggtgtattggatcat---gattttaagggattttaaaagacttttt 283  Q
    |||||||||||||||||||||||   |||| |||||||||||||||||||||||    
T  7113337 attaagggggtgtattggatcatcatgattctaagggattttaaaagacttttt 7113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 7719574 - 7719515
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||||||||| ||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgt 7719515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 9179764 - 9179829
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||| |  ||| |||  ||||||||||||| |||||||||||||||||||||||    
T  9179764 agggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgt 9179829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 29615083 - 29615018
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| |||||| || | |||||||||||||||||| || |||||||||||||||    
T  29615083 aggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgt 29615018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 28342229 - 28342293
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  28342229 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 28342293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 7993021 - 7993088
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||| |||||||||| | |||| ||  ||||||||||||||||||| || |||||||||||||||    
T  7993021 taaggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgt 7993088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 41827201 - 41827260
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| |  |||||| |||||||||||||||||||| || |||||||||||||||    
T  41827201 tgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgt 41827260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 10068342 - 10068412
Alignment:
Q  233 attaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| |||||||||  |||||| | | ||||||||||||||||||| || |||||||||||||||    
T  10068342 attaagggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgt 10068412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 23101174 - 23101244
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| ||||| ||||| |||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  23101174 tatttaggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 23101244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 32883657 - 32883727
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||| |||||||||| |||||| || |||||||||||||| ||||| || |||||||||| ||||    
T  32883657 tattagggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgt 32883727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 37649782 - 37649734
Alignment:
Q  236 aagggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    |||||||||||||| || | ||||| ||| |||||||||||||||||||    
T  37649782 aagggggtgtattgaattaagatttcaagagattttaaaagacttttta 37649734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 39027975 - 39028043
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| ||| |||||||||| | |||||||  | ||||||||||||||||| || |||||||||||||||    
T  39027975 ttaaagggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgt 39028043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 48117911 - 48117847
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| |  ||| || |||||||||||||||||||| || |||||||||||||||    
T  48117911 ggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgt 48117847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 730030 - 730093
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagactttttttcatgaaaaagtcttgt 730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 953699 - 953764
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  953699 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 953764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 28824692 - 28824627
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28824692 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 28824627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 19452169 - 19452105
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgt 19452105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 21222029 - 21222093
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgt 21222093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 22183251 - 22183315
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  22183251 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgt 22183315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 45760329 - 45760265
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgt 45760265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 35279554 - 35279617
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgt 35279617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 49198585 - 49198522
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgt 49198522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 35679445 - 35679383
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgt 35679383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 47654669 - 47654608
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaagact--ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgt 47654608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 6304574 - 6304509
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||||    
T  6304574 agggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgt 6304509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 49417963 - 49418025
Alignment:
Q  236 aagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtc 297  Q
    |||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  49417963 aagggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtc 49418025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 33025393 - 33025457
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||| || |||||||||| |||||||||||||||| ||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgt 33025457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 50192870 - 50192806
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| |||||| |||||||||||||||    
T  50192870 gggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgt 50192806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 48524208 - 48524259
Alignment:
Q  245 tattggatcatgattttaagggattttaaaagactttttatcatgaaaaagt 296  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagactttttatcataaaaaagt 48524259  T

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Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 47780502 - 47780564
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgt 47780564  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 31572470 - 31572418
Alignment:
Q  250 gatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgt 31572418  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 14494093 - 14494154
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||| ||||||    
T  14494093 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgt 14494154  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 28541384 - 28541430
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||    
T  28541384 agggggtgtattggatcatgattctaagcgattttaaaagatttttt 28541430  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 6312455 - 6312519
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  6312455 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 6312519  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 9322819 - 9322755
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  9322819 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 9322755  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 19893451 - 19893495
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    |||||||||| || | |||||||||||||||||||||||||||||    
T  19893451 gggtgtattgaattaagattttaagggattttaaaagacttttta 19893495  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 49230767 - 49230827
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtc 297  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||    
T  49230767 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtc 49230827  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 15835367 - 15835308
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 15835308  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 29396710 - 29396643
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||| |||||||||| | |||| || || ||||||||||||||||| || |||||||||||||||    
T  29396710 taaggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgt 29396643  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 14229139 - 14229093
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||||||||||| |||  |||||| ||||||||||||||||||||||    
T  14229139 agggggtgtatttgattgtgatttcaagggattttaaaagacttttt 14229093  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 9577752 - 9577687
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| | ||||  |||||||||||||||||||||| || |||||||||| ||||    
T  9577752 aggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgt 9577687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 46327922 - 46327987
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| || ||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  46327922 aggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 46327987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 8141447 - 8141383
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| ||||||| || | |||| || |||||||||||||||||||| || |||||||||||||||    
T  8141447 ggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 8141383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 19007668 - 19007604
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtct 298  Q
    |||| |||||||||| ||   ||||| |||||||||||||||||| |||||| ||||||||||||    
T  19007668 taagtgggtgtattgaattgagatttcaagggattttaaaagacttttttataatgaaaaagtct 19007604  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 25612038 - 25612102
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||| ||||||    
T  25612038 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgt 25612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 28387718 - 28387650
Alignment:
Q  233 attaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtctt 299  Q
    |||||||||| | |||||||| | |||| || |||||||||||||||||||| || |||||||||||||    
T  28387718 attaagggggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 28387650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 29219169 - 29219233
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || || ||||||||||||||||| || |||||||||||||||    
T  29219169 ggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgt 29219233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 31622755 - 31622692
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga--ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||| || ||||||| ||||||||||||||||   |||||||||||||| ||| ||||    
T  31622755 gggtgtattgaattatgatttgaagggattttaaaagattttttttatcatgaaagagttttgt 31622692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 42657712 - 42657776
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||||||||   ||||| ||| |||||||||||||||||| || || ||||||||||||    
T  42657712 gggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgt 42657776  T

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Target: scaffold0037 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 100095 - 100161
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtctt 299  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  100095 ttaagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtctt 100161  T

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Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 41881403 - 41881338
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagact--ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  41881403 gggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgt 41881338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 22201901 - 22201966
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  22201901 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 22201966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 40537467 - 40537400
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagactttt-tatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  40537467 taagggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgt 40537400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 42786653 - 42786719
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  42786653 agggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgt 42786719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 24131289 - 24131227
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 24131227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 1044697 - 1044761
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgt 1044761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 39479680 - 39479612
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||||    
T  39479680 ttaagggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgt 39479612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 25331015 - 25331082
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||||||||||    
T  25331015 taagggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgt 25331082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 30009997 - 30009934
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtctt 299  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  30009997 agggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtctt 30009934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 25445983 - 25446044
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgt 25446044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 28541587 - 28541649
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgt 28541649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 7250090 - 7250028
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgt 7250028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 20021226 - 20021295
Alignment:
Q  234 ttaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||||| || |||||||||||||||    
T  20021226 ttaagggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgt 20021295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 31315043 - 31314983
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgt 31314983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 37915672 - 37915736
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||||||||| |||||| || |||||||||||||||||||| || |||||||||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgt 37915736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 46635964 - 46635905
Alignment:
Q  236 aagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaa 294  Q
    |||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  46635964 aaggaggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaa 46635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 37046769 - 37046707
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||| |||||||||||  |||||||||| ||||||||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgt 37046707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 32951144 - 32951091
Alignment:
Q  249 ggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgt 32951091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 55302732 - 55302789
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagt 296  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagt 55302789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 1112784 - 1112844
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagactttt--tatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||| ||||  ||||||||||||||||  |||||||||||||||||||    
T  1112784 ggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgt 1112844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 23987143 - 23987207
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || |||||||||||||||    
T  23987143 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgt 23987207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 19741226 - 19741163
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagactttttatcatgaaaaagtcttgt 301  Q
    |||| ||||||  ||||||||| |||  ||||||||||||||||||||||||||||| ||||||    
T  19741226 ggggatgtattcaatcatgattctaaaagattttaaaagactttttatcatgaaaaaatcttgt 19741163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 27454407 - 27454352
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaa 294  Q
    |||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||    
T  27454407 gggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaa 27454352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 30967613 - 30967554
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgt 30967554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 54341028 - 54341095
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  54341028 taaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 54341095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 7007262 - 7007324
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||| |||| ||||||||||||||||||||||| |||| ||||||| |||||||||| ||||    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgt 7007324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 41320631 - 41320697
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtc 297  Q
    |||| ||||||||||||||||||||||| |||  ||||||||||||  ||||||| |||||||||||    
T  41320631 tatttagggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc 41320697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 34228878 - 34228837
Alignment:
Q  261 taagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  34228878 taagggattttaaaagacttttttatcatgaaaaagtcttgt 34228837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 5441291 - 5441355
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  5441291 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 5441355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 23464840 - 23464906
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga---ctttttatcatgaaaaagtcttgt 301  Q
    |||| |||||||||| |||||| ||||| |||||||||||    |||||||||||||||||||||||    
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgt 23464906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 27767943 - 27768007
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  27767943 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 27768007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 34141690 - 34141639
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    ||||||||| |||||||||| | ||||||| | |||||||||||||||||||    
T  34141690 attaaggggatgtattggattaagattttatgagattttaaaagacttttta 34141639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  244 gtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 283
Target Start/End: Original strand, 49469210 - 49469253
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||||||||  |||| |||||||||||||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagacttttt 49469253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 53275727 - 53275786
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttg 300  Q
    |||||||||||||||||| ||||| ||||||||| |  |||||||||||||||| |||||    
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttg 53275786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 25504955 - 25504894
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||||||||| | || ||| ||||||||||| ||||||| ||||||||||||||||||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgt 25504894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 44646719 - 44646765
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    |||||||||||| |||| ||||| ||| |||||||||||||||||||    
T  44646719 gggggtgtattgaatcaagatttcaagagattttaaaagacttttta 44646765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 49835126 - 49835068
Alignment:
Q  244 gtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 49835068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 54853787 - 54853723
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | ||||||| || ||||||||||||||||| || | |||||||||||||    
T  54853787 ggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgt 54853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 56445689 - 56445637
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    ||||| |||| |||||||||| | |||| ||||| ||||||||||||||||||    
T  56445689 tattagggggatgtattggattaagattctaaggaattttaaaagacttttta 56445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 39177 - 39108
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  39177 attaagggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt 39108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 2301057 - 2300992
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  2301057 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 2300992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 29076484 - 29076549
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgt 29076549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 29111457 - 29111522
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac--tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgt 29111522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 6197796 - 6197736
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtc 297  Q
    |||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtc 6197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 1391513 - 1391575
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgt 1391575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 7051731 - 7051796
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||| || ||| | |||| |||| ||||||||||||| |||||||||||||||||||||||    
T  7051731 agggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgt 7051796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 25839722 - 25839771
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagactttttatca 287  Q
    |||| ||||||||||||||||| ||||||||||||||  |||||||||||    
T  25839722 ggggatgtattggatcatgattgtaagggattttaaattactttttatca 25839771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 31895578 - 31895647
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  31895578 attagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 31895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 34773295 - 34773360
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  34773295 aggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgt 34773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 263
Target Start/End: Original strand, 656858 - 656886
Alignment:
Q  235 taagggggtgtattggatcatgattttaa 263  Q
    |||||||||||||||||||||||||||||    
T  656858 taagggggtgtattggatcatgattttaa 656886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 14262751 - 14262687
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||| ||||||    
T  14262751 ggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgt 14262687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 31170946 - 31170881
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  31170946 agggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 31170881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 12407265 - 12407333
Alignment:
Q  234 ttaagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  12407265 ttaagggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgt 12407333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 24776244 - 24776308
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 24776308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 20605042 - 20605105
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgt 20605105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 9120052 - 9120114
Alignment:
Q  233 attaagggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaa 294  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  9120052 attaagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaa 9120114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 22552082 - 22552020
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 22552020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 14198894 - 14198833
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 14198833  T

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Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 44765667 - 44765728
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgt 44765728  T

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Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 305789 - 305723
Alignment:
Q  237 agggggtgtattggatcatgattttaagggattttaaaagact--ttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  305789 agggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgt 305723  T

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Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 16269581 - 16269644
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgt 16269644  T

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Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 378862 - 378932
Alignment:
Q  233 attaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  378862 attaagggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgt 378932  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 35316952 - 35317015
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    ||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  35316952 ggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgt 35317015  T

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Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 1789331 - 1789395
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| |||| ||||||||||||  |||||||||| ||||||||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgt 1789395  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 26601524 - 26601457
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagact-ttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| || ||| ||||||||||||||| |||||| || ||||||||||||    
T  26601524 taagggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgt 26601457  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 32125152 - 32125203
Alignment:
Q  251 atcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgt 32125203  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 19144907 - 19144977
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    ||||||||||||||||||||  |||||| ||||||||||||||| |  |||||||||| ||||||||||||    
T  19144907 tattaagggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgt 19144977  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 28844438 - 28844508
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| ||||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  28844438 tatttaggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 28844508  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 43847536 - 43847597
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtctt 299  Q
    |||||||||| |||||||  | |||||||||||||||||| |||||||| ||||||||||||    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtctt 43847597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 14920666 - 14920622
Alignment:
Q  239 ggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagacttttt 14920622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 26788673 - 26788737
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  26788673 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 26788737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 3858269 - 3858226
Alignment:
Q  241 ggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    ||||||||| || | |||||||||||||||||||||||||||||    
T  3858269 ggtgtattgaattaagattttaagggattttaaaagacttttta 3858226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 5093352 - 5093317
Alignment:
Q  244 gtattggatcatgattttaagggattttaaaagact 279  Q
    |||||||||||||||| |||||||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact 5093317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 43078569 - 43078628
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgt 43078628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 28740598 - 28740540
Alignment:
Q  244 gtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 28740540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 3463555 - 3463624
Alignment:
Q  234 ttaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| |||||| || | |||||||||||||||||| || |||||||| ||||||    
T  3463555 ttaagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgt 3463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 215546 - 215482
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  215546 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 215482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 38837 - 38775
Alignment:
Q  240 gggtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgt 38775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 8654 - 8714
Alignment:
Q  242 gtgtattggatcatgattttaagggattttaaaaga-ctttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgt 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 1974 - 1925
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttta 284  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  1974 taagggggtgtattgaatcaagattttaagagattttaaaagacttttta 1925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 102021 - 102069
Alignment:
Q  235 taagggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  102021 taagcgggtgtattagatcatgattctaagggattttaaaagacttttt 102069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 15349 - 15288
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||| ||||||    
T  15349 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgt 15288  T

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Target: scaffold0365 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 15992 - 15931
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagac-tttttatcatgaaaaagtcttgt 301  Q
    |||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||| ||||||    
T  15992 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgt 15931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 10453 - 10512
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgt 10512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 34894 - 34843
Alignment:
Q  232 tattaagggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||||||||||||||||||||   |||||||| ||||||||||| |||||||    
T  34894 tattaagggggtgtattggattgagattttaaaggattttaaaatacttttt 34843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 12087 - 12030
Alignment:
Q  243 tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtctt 299  Q
    |||||||||| | |||| || |||||||||||||||||||| || |||||||||||||    
T  12087 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 13807 - 13876
Alignment:
Q  234 ttaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  13807 ttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 13876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 21520 - 21451
Alignment:
Q  234 ttaaggggg-tgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    ||||||||| |||||||||| | |||| || | |||||||||||||||||| || |||||||||||||||    
T  21520 ttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgt 21451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 81868 - 81823
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt 283  Q
    |||||||||||||||   |||||||| |||||||||||||||||||    
T  81868 gggggtgtattggattgagattttaaaggattttaaaagacttttt 81823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Complemental strand, 58353 - 58289
Alignment:
Q  238 gggggtgtattggatcatgattttaagggattttaaaagacttttt-atcatgaaaaagtcttgt 301  Q
    |||| |||||||||| | ||||  | |||||||||||||||||||| || |||||||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgt 58289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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